Pregenerated sensors for C6ORF52 (Homo sapiens)
Ensembl gene IDs: ENSG00000137434Ensembl transcript IDs: ENST00000259983.8, ENST00000379586.5, ENST00000426700.6, ENST00000460742.6, ENST00000467832.2, ENST00000503680.1, ENST00000642282.1, ENST00000643843.1, ENST00000644703.1, ENST00000646332.1, ENST00000647040.1, ENST00000647114.1
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGTAGCCAGAAAGAAGGTAAGAGCCGTGCTGTCGCGCATACCAGTTaGCATAGCGGTAACTCTGGCTGGGCTGGAACTCCTGCTTCACTC | + |
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Preference number: 5 (lower is better) Translates to: CSQKEGKSRAVAHTS*HSGNSGWAGTPASL Trigger: GAGTGAAGCAGGAGTTCCAGCCCAGCCAGAGTTACCGCTATGGCAACTGGTATGCGCGACAGCACGGCTCTTACCTTCTTTCTGGCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000259983.8 ENST00000426700.6 ENST00000460742.6 ENST00000503680.1 ENST00000642282.1 ENST00000643843.1 ENST00000644703.1 ENST00000646332.1 |
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| CDS GCA 90 bp | AGGGGTCTCATGCGCAGAAAAACAGTCCTTTCCATTTCCATCCACTaGACAGCCATAGCTGTAGCCAGAAAGAAGGTAAGAGCCGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: RGLMRRKTVLSISIH*TAIAVARKKVRAVL Trigger: CAGCACGGCTCTTACCTTCTTTCTGGCTACAGCTATGGCTGTGCAGTGGATGGAAATGGAAAGGACTGTTTTTCTGCGCATGAGACCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000259983.8 ENST00000426700.6 ENST00000460742.6 ENST00000503680.1 ENST00000642282.1 ENST00000643843.1 ENST00000644703.1 ENST00000646332.1 |
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| CDS GCA 90 bp | TCCTTAGGCATAACCAGAGTTCCAGCTGTGTGTTCAGGGGTCTCATaGGCAGAAAAACAGTCCTTTCCATTTCCATCCACTGCACAGCCA | + |
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Preference number: 5 (lower is better) Translates to: SLGITRVPAVCSGVS*AEKQSFPFPSTAQP Trigger: TGGCTGTGCAGTGGATGGAAATGGAAAGGACTGTTTTTCTGCGCATGAGACCCCTGAACACACAGCTGGAACTCTGGTTATGCCTAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000259983.8 ENST00000379586.5 ENST00000426700.6 ENST00000642282.1 ENST00000644703.1 ENST00000647114.1 |
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| CDS GCA 90 bp | CACTTAGGCATAACCAGAGTTCCAGCTGTGTGTTCAGGGGTCTCATaGGCAGAAAAACAGTCCTTTCCATTTCCATCCACTGCACAGCCA | + |
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Preference number: 5 (lower is better) Translates to: HLGITRVPAVCSGVS*AEKQSFPFPSTAQP Trigger: TGGCTGTGCAGTGGATGGAAATGGAAAGGACTGTTTTTCTGCGCATGAGACCCCTGAACACACAGCTGGAACTCTGGTTATGCCTAAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000460742.6 ENST00000503680.1 ENST00000643843.1 ENST00000646332.1 |
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| CDS CCA 90 bp | ATTGCGGAGTTTAATGAACACCTTGCTTCACTTCGGGGTCTCATCTaGGATTTCGGAGTGAACTGTGTCCAGAGGCTGCCAGTGGCAATT | + |
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Preference number: 5 (lower is better) Translates to: IAEFNEHLASLRGLI*DFGVNCVQRLPVAI Trigger: AATTGCCACTGGCAGCCTCTGGACACAGTTCACTCCGAAATCCCAGATGAGACCCCGAAGTGAAGCAAGGTGTTCATTAAACTCCGCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000259983.8 ENST00000379586.5 ENST00000426700.6 ENST00000460742.6 ENST00000467832.2 ENST00000503680.1 ENST00000642282.1 ENST00000643843.1 ENST00000644703.1 ENST00000646332.1 ENST00000647040.1 ENST00000647114.1 |
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| CDS TCA 90 bp | ACCCAGAAACCTATTAACGACAGAAAGCCTCGTTCCGCTGGTCCCTaGACAAAAACTCCTACCCTACTAGTACACAGCCCACAACAATGC | + |
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Preference number: 5 (lower is better) Translates to: TQKPINDRKPRSAGP*TKTPTLLVHSPQQC Trigger: GCATTGTTGTGGGCTGTGTACTAGTAGGGTAGGAGTTTTTGTTCAGGGACCAGCGGAACGAGGCTTTCTGTCGTTAATAGGTTTCTGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259983.8 ENST00000642282.1 |
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| CDS GCA 90 bp | GTGGTTTCCTTTGCCAGTAGCAGTAATAGTTATTTTGTTGAGCTATaGCAAAATCTGCAGAACTCTCTGGTTGGGCCATTTACCCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: VVSFASSSNSYFVEL*QNLQNSLVGPFTQK Trigger: TTTCTGGGTAAATGGCCCAACCAGAGAGTTCTGCAGATTTTGGCATAGCTCAACAAAATAACTATTACTGCTACTGGCAAAGGAAACCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000467832.2 ENST00000647040.1 |
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| CDS GCA 90 bp | TTGCCAGTAGCAGTAATAGTTATTTTGTTGAGCTATGCCAAAATCTaGAGAACTCTCTGGTTGGGCCATTTACCCAGAAACCTATTAACG | + |
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Preference number: 5 (lower is better) Translates to: LPVAVIVILLSYAKI*RTLWLGHLPRNLLT Trigger: CGTTAATAGGTTTCTGGGTAAATGGCCCAACCAGAGAGTTCTGCAGATTTTGGCATAGCTCAACAAAATAACTATTACTGCTACTGGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000259983.8 ENST00000467832.2 ENST00000642282.1 ENST00000647040.1 |
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| CDS CCA 90 bp | GTAATAGTTATTTTGTTGAGCTATGCCAAAATCTGCAGAACTCTCTaGTTGGGCCATTTACCCAGAAACCTATTAACGACAGAAAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: VIVILLSYAKICRTL*LGHLPRNLLTTESL Trigger: GAGGCTTTCTGTCGTTAATAGGTTTCTGGGTAAATGGCCCAACCAGAGAGTTCTGCAGATTTTGGCATAGCTCAACAAAATAACTATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000259983.8 ENST00000467832.2 ENST00000642282.1 ENST00000647040.1 |
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| CDS TCA 90 bp | TCACTTTTCACCATAAACTCTTGGTTTGATTCCTCAATATTCAAATaGAGATGTGGATCTGTAACCCCAACACTTTGGGAAGCTGAGACC | + |
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Preference number: 5 (lower is better) Translates to: SLFTINSWFDSSIFK*RCGSVTPTLWEAET Trigger: GGTCTCAGCTTCCCAAAGTGTTGGGGTTACAGATCCACATCTTCATTTGAATATTGAGGAATCAAACCAAGAGTTTATGGTGAAAAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000503680.1 ENST00000646332.1 |
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| CDS TCA 90 bp | GAGGGAGTCGTAGAGTTCTTCACTTTTCACCATAAACTCTTGGTTTaGTTCCTCAATATTCAAATGAAGATGTGGATCTGTAACCCCAAC | + |
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Preference number: 5 (lower is better) Translates to: EGVVEFFTFHHKLLV*FLNIQMKMWICNPN Trigger: GTTGGGGTTACAGATCCACATCTTCATTTGAATATTGAGGAATCAAACCAAGAGTTTATGGTGAAAAGTGAAGAACTCTACGACTCCCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000503680.1 ENST00000646332.1 |
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| CDS GCA 72 bp | AAAACTCCTACCCTACTAGTACACAGCCCACAACAATaGACGCTGCCGGCGCTACAGCCCCTAAGCAACCGG | + |
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Preference number: 6 (lower is better) Translates to: KTPTLLVHSPQQ*TLPALQPLSNR Trigger: CCGGTTGCTTAGGGGCTGTAGCGCCGGCAGCGTGCATTGTTGTGGGCTGTGTACTAGTAGGGTAGGAGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000259983.8 ENST00000379586.5 ENST00000647114.1 |
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| CDS GCA 72 bp | AAAGAAGGTAAGAGCCGTGCTGTCGCGCATACCAGTTaGCATAGCGGTAACTCTGGCTGGGCTGGAACTCCT | + |
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Preference number: 6 (lower is better) Translates to: KEGKSRAVAHTS*HSGNSGWAGTP Trigger: AGGAGTTCCAGCCCAGCCAGAGTTACCGCTATGGCAACTGGTATGCGCGACAGCACGGCTCTTACCTTCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000259983.8 ENST00000426700.6 ENST00000460742.6 ENST00000503680.1 ENST00000642282.1 ENST00000643843.1 ENST00000644703.1 ENST00000646332.1 |
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| CDS TCA 72 bp | CCTATTAACGACAGAAAGCCTCGTTCCGCTGGTCCCTaGACAAAAACTCCTACCCTACTAGTACACAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: PINDRKPRSAGP*TKTPTLLVHSP Trigger: TGGGCTGTGTACTAGTAGGGTAGGAGTTTTTGTTCAGGGACCAGCGGAACGAGGCTTTCTGTCGTTAATAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000259983.8 ENST00000379586.5 ENST00000642282.1 ENST00000647114.1 |
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| CDS CCA 72 bp | TTTAATGAACACCTTGCTTCACTTCGGGGTCTCATCTaGGATTTCGGAGTGAACTGTGTCCAGAGGCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: FNEHLASLRGLI*DFGVNCVQRLP Trigger: TGGCAGCCTCTGGACACAGTTCACTCCGAAATCCCAGATGAGACCCCGAAGTGAAGCAAGGTGTTCATTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000259983.8 ENST00000379586.5 ENST00000426700.6 ENST00000460742.6 ENST00000467832.2 ENST00000503680.1 ENST00000642282.1 ENST00000643843.1 ENST00000644703.1 ENST00000646332.1 ENST00000647040.1 ENST00000647114.1 |
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| CDS GCA 72 bp | ATGCGCAGAAAAACAGTCCTTTCCATTTCCATCCACTaGACAGCCATAGCTGTAGCCAGAAAGAAGGTAAGA | + |
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Preference number: 6 (lower is better) Translates to: MRRKTVLSISIH*TAIAVARKKVR Trigger: TCTTACCTTCTTTCTGGCTACAGCTATGGCTGTGCAGTGGATGGAAATGGAAAGGACTGTTTTTCTGCGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000259983.8 ENST00000426700.6 ENST00000460742.6 ENST00000503680.1 ENST00000642282.1 ENST00000643843.1 ENST00000644703.1 ENST00000646332.1 |
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| CDS CAA 72 bp | TTGTTGAGCTATGCCAAAATCTGCAGAACTCTCTGGTaGGGCCATTTACCCAGAAACCTATTAACGACAGAA | + |
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Preference number: 6 (lower is better) Translates to: LLSYAKICRTLW*GHLPRNLLTTE Trigger: TTCTGTCGTTAATAGGTTTCTGGGTAAATGGCCCAACCAGAGAGTTCTGCAGATTTTGGCATAGCTCAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000259983.8 ENST00000467832.2 ENST00000642282.1 ENST00000647040.1 |
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| CDS CAA 90 bp | CTAGAGGTGTGGTTTCCTTTGCCAGTAGCAGTAATAGTTATTTTGTaGAGCTATGCCAAAATCTGCAGAACTCTCTGGTTGGGCCATTTA | + |
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Preference number: 6 (lower is better) Translates to: LEVWFPLPVAVIVIL*SYAKICRTLWLGHL Trigger: TAAATGGCCCAACCAGAGAGTTCTGCAGATTTTGGCATAGCTCAACAAAATAACTATTACTGCTACTGGCAAAGGAAACCACACCTCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000467832.2 ENST00000647040.1 |
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| CDS GCA 72 bp | GCAGTAATAGTTATTTTGTTGAGCTATGCCAAAATCTaGAGAACTCTCTGGTTGGGCCATTTACCCAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: AVIVILLSYAKI*RTLWLGHLPRN Trigger: GTTTCTGGGTAAATGGCCCAACCAGAGAGTTCTGCAGATTTTGGCATAGCTCAACAAAATAACTATTACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000259983.8 ENST00000467832.2 ENST00000642282.1 ENST00000647040.1 |
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| CDS TCA 72 bp | ACCATAAACTCTTGGTTTGATTCCTCAATATTCAAATaGAGATGTGGATCTGTAACCCCAACACTTTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: TINSWFDSSIFK*RCGSVTPTLWE Trigger: TTCCCAAAGTGTTGGGGTTACAGATCCACATCTTCATTTGAATATTGAGGAATCAAACCAAGAGTTTATGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503680.1 ENST00000646332.1 |
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| CDS TCA 72 bp | GTAGAGTTCTTCACTTTTCACCATAAACTCTTGGTTTaGTTCCTCAATATTCAAATGAAGATGTGGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: VEFFTFHHKLLV*FLNIQMKMWIF Trigger: GAAGATCCACATCTTCATTTGAATATTGAGGAATCAAACCAAGAGTTTATGGTGAAAAGTGAAGAACTCTAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000259983.8 ENST00000379586.5 ENST00000426700.6 ENST00000460742.6 ENST00000467832.2 ENST00000642282.1 ENST00000643843.1 ENST00000644703.1 ENST00000647040.1 ENST00000647114.1 |
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| CDS TCA 72 bp | GTAGAGTTCTTCACTTTTCACCATAAACTCTTGGTTTaGTTCCTCAATATTCAAATGAAGATGTGGATCTGT | + |
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Preference number: 6 (lower is better) Translates to: VEFFTFHHKLLV*FLNIQMKMWIC Trigger: ACAGATCCACATCTTCATTTGAATATTGAGGAATCAAACCAAGAGTTTATGGTGAAAAGTGAAGAACTCTAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503680.1 ENST00000646332.1 |
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