RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C6ORF223 (Homo sapiens)

Ensembl gene IDs: ENSG00000181577

Ensembl transcript IDs: ENST00000336600.6, ENST00000439969.2, ENST00000442114.6, ENST00000448947.2

Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp CGCTCTACCGGCCCGCGAGTCCTCCGCGACATCCGGGCCAGCGTCTaGACCCAGCCACGTGTCCTGCCCCTGGTGCGCAGGTGGACTGCT +
Preference number: 5 (lower is better)
Translates to: RSTGPRVLRDIRASV*TQPRVLPLVRRWTA
Trigger: AGCAGTCCACCTGCGCACCAGGGGCAGGACACGTGGCTGGGTGCAGACGCTGGCCCGGATGTCGCGGAGGACTCGCGGGCCGGTAGAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
ENST00000448947.2
CDS GCA 90 bp TCCTCCGCGACATCCGGGCCAGCGTCTGCACCCAGCCACGTGTCCTaGCCCTGGTGCGCAGGTGGACTGCTTTCCTATGTCTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: SSATSGPASAPSHVS*PWCAGGLLSYVWGG
Trigger: TCCACCCCAGACATAGGAAAGCAGTCCACCTGCGCACCAGGGGCAGGACACGTGGCTGGGTGCAGACGCTGGCCCGGATGTCGCGGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
ENST00000448947.2
CDS GCA 90 bp CGGGTCTGGGAGTTCTGGCTGGGCGGACTTCCCTTCCCTTCTCCGTaGCTCAAGTGCCAAACGGGGGTACTGCTGCCCTGCGTGCCTTTG +
Preference number: 5 (lower is better)
Translates to: RVWEFWLGGLPFPSP*LKCQTGVLLPCVPL
Trigger: CAAAGGCACGCAGGGCAGCAGTACCCCCGTTTGGCACTTGAGGCACGGAGAAGGGAAGGGAAGTCCGCCCAGCCAGAACTCCCAGACCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
CDS GCA 90 bp GAGTTCTGGCTGGGCGGACTTCCCTTCCCTTCTCCGTGCCTCAAGTaGCAAACGGGGGTACTGCTGCCCTGCGTGCCTTTGCCACTCCTC +
Preference number: 5 (lower is better)
Translates to: EFWLGGLPFPSPCLK*QTGVLLPCVPLPLL
Trigger: GAGGAGTGGCAAAGGCACGCAGGGCAGCAGTACCCCCGTTTGGCACTTGAGGCACGGAGAAGGGAAGGGAAGTCCGCCCAGCCAGAACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
CDS GCA 90 bp CCTTCTCCTTTGACTGCAGCCACCTCAGTCTCACCCTCCGCAGAATaGAGGCCCACTCCGTTGCTGAAGGGCCTCCTCCTTGGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: PSPLTAATSVSPSAE*RPTPLLKGLLLGPG
Trigger: CCCTGGCCCAAGGAGGAGGCCCTTCAGCAACGGAGTGGGCCTGCATTCTGCGGAGGGTGAGACTGAGGTGGCTGCAGTCAAAGGAGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442114.6
CDS TCA 90 bp TGCTGGCCCTCCCACCCTACCACTCTGACCCTCCTCCGAGGCATGTaGGAGGGATTCCAGAGAAGAACTCCCAGAGCCTGCCACCCAACC +
Preference number: 5 (lower is better)
Translates to: CWPSHPTTLTLLRGM*EGFQRRTPRACHPT
Trigger: GGTTGGGTGGCAGGCTCTGGGAGTTCTTCTCTGGAATCCCTCTCACATGCCTCGGAGGAGGGTCAGAGTGGTAGGGTGGGAGGGCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS GCA 90 bp TCCCTCAAACTGGAGGCACCTAGGGTTACCAGATCCTCCGCAGAATaGAGGCCCACTCCGTTGCTGAAGGGCCTCCTCCTTGGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: SLKLEAPRVTRSSAE*RPTPLLKGLLLGPG
Trigger: CCCTGGCCCAAGGAGGAGGCCCTTCAGCAACGGAGTGGGCCTGCATTCTGCGGAGGATCTGGTAACCCTAGGTGCCTCCAGTTTGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448947.2
CDS GCA 90 bp GAGGGATTCCAGAGAAGAACTCCCAGAGCCTGCCACCCAACCTGCTaGCCCTCCCCACTGATGAAGGACACTCTGTCTCCACTTGGCCCC +
Preference number: 5 (lower is better)
Translates to: EGFQRRTPRACHPTC*PSPLMKDTLSPLGP
Trigger: GGGGCCAAGTGGAGACAGAGTGTCCTTCATCAGTGGGGAGGGGCAGCAGGTTGGGTGGCAGGCTCTGGGAGTTCTTCTCTGGAATCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS CCA 90 bp GGCACGGGCCCAGCGGGCCGGTCTAAATCAGAGGTCCACCTTCACTaGGAGGGCAGTCGGAGAACCCACATTGTCTGCAGACTCTCACAT +
Preference number: 5 (lower is better)
Translates to: GTGPAGRSKSEVHLH*EGSRRTHIVCRLSH
Trigger: ATGTGAGAGTCTGCAGACAATGTGGGTTCTCCGACTGCCCTCCCAGTGAAGGTGGACCTCTGATTTAGACCGGCCCGCTGGGCCCGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
CDS TCA 90 bp GGATGGGTGGGGAGGGCAGAGAGCAGTGAGGGTTTGCCCAGGCAGTaGCTTTGGACCCAAGTGTGGAAAGGAACTCCTGCTGGCTCAAGC +
Preference number: 5 (lower is better)
Translates to: GWVGRAESSEGLPRQ*LWTQVWKGTPAGSS
Trigger: GCTTGAGCCAGCAGGAGTTCCTTTCCACACTTGGGTCCAAAGTCACTGCCTGGGCAAACCCTCACTGCTCTCTGCCCTCCCCACCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS TCA 90 bp TTTCCCACGGTCACAGCCTCAACAAACCCCTGCCCCCTTCTCCTTTaGCTGCAGCCACCTCAGTCTCACCCTCCGCAGAATGCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: FPTVTASTNPCPLLL*LQPPQSHPPQNAGP
Trigger: TGGGCCTGCATTCTGCGGAGGGTGAGACTGAGGTGGCTGCAGTCAAAGGAGAAGGGGGCAGGGGTTTGTTGAGGCTGTGACCGTGGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442114.6
CDS CCA 90 bp GAGTCCGTCGTGCTGCTCATAAAGCCACTGTTAAACGAGCGGGTCTaGGAGTTCTGGCTGGGCGGACTTCCCTTCCCTTCTCCGTGCCTC +
Preference number: 5 (lower is better)
Translates to: ESVVLLIKPLLNERV*EFWLGGLPFPSPCL
Trigger: GAGGCACGGAGAAGGGAAGGGAAGTCCGCCCAGCCAGAACTCCCAGACCCGCTCGTTTAACAGTGGCTTTATGAGCAGCACGACGGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
CDS GCA 90 bp GGACTCTGCAGTGCCCAGGAGCTGATCTGTGCGCACACGTATGTGTaGATTCGTGTGTCATGGACTAACCGCTGGGGCATGAAGCCCACC +
Preference number: 5 (lower is better)
Translates to: GLCSAQELICAHTYV*IRVSWTNRWGMKPT
Trigger: GGTGGGCTTCATGCCCCAGCGGTTAGTCCATGACACACGAATGCACACATACGTGTGCGCACAGATCAGCTCCTGGGCACTGCAGAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS TCA 90 bp GGAGGGGGCAGCACCTCCTTCGTGGTGACCCTGGGCATTTGGAACTaGACACGAGCCTTTCTAAGCACCCCTGACTCACAGCATCAAGGA +
Preference number: 5 (lower is better)
Translates to: GGGSTSFVVTLGIWN*TRAFLSTPDSQHQG
Trigger: TCCTTGATGCTGTGAGTCAGGGGTGCTTAGAAAGGCTCGTGTTCAGTTCCAAATGCCCAGGGTCACCACGAAGGAGGTGCTGCCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS CCA 90 bp GTGCTGCTCATAAAGCCACTGTTAAACGAGCGGGTCTGGGAGTTCTaGCTGGGCGGACTTCCCTTCCCTTCTCCGTGCCTCAAGTGCCAA +
Preference number: 5 (lower is better)
Translates to: VLLIKPLLNERVWEF*LGGLPFPSPCLKCQ
Trigger: TTGGCACTTGAGGCACGGAGAAGGGAAGGGAAGTCCGCCCAGCCAGAACTCCCAGACCCGCTCGTTTAACAGTGGCTTTATGAGCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
CDS TCA 90 bp TTGGTATCAAATTCTCACACTTGTGGATGGAGTGGTGCAGCTCCCTaGGTCTCCCCTACCTATGCTGCCCGCCTTGGGCTTCCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: LVSNSHTCGWSGAAP*VSPTYAARLGLPGV
Trigger: GACCCCAGGAAGCCCAAGGCGGGCAGCATAGGTAGGGGAGACTCAGGGAGCTGCACCACTCCATCCACAAGTGTGAGAATTTGATACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS TCA 90 bp CTGACCATCAGTAAGGTGGGCTGCTTGTGCCTGGGGGTCTTCTGGTaGAAAGAGCCCTCCATCTACTCCCTCCTTCCTCAACAACCTCCG +
Preference number: 5 (lower is better)
Translates to: LTISKVGCLCLGVFW*KEPSIYSLLPQQPP
Trigger: CGGAGGTTGTTGAGGAAGGAGGGAGTAGATGGAGGGCTCTTTTCACCAGAAGACCCCCAGGCACAAGCAGCCCACCTTACTGATGGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439969.2
CDS GCA 90 bp TTCCCTTCTCCGTGCCTCAAGTGCCAAACGGGGGTACTGCTGCCCTaGGTGCCTTTGCCACTCCTCCCACTGAAGGCTAACTTTCCAATA +
Preference number: 5 (lower is better)
Translates to: FPSPCLKCQTGVLLP*VPLPLLPLKANFPI
Trigger: TATTGGAAAGTTAGCCTTCAGTGGGAGGAGTGGCAAAGGCACGCAGGGCAGCAGTACCCCCGTTTGGCACTTGAGGCACGGAGAAGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
CDS GCA 90 bp GCGTTCCCTGTTGGTATCAAATTCTCACACTTGTGGATGGAGTGGTaGAGCTCCCTGAGTCTCCCCTACCTATGCTGCCCGCCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: AFPVGIKFSHLWMEW*SSLSLPYLCCPPWA
Trigger: AGCCCAAGGCGGGCAGCATAGGTAGGGGAGACTCAGGGAGCTGCACCACTCCATCCACAAGTGTGAGAATTTGATACCAACAGGGAACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS CCA 90 bp CCTGCGTTCCCTGTTGGTATCAAATTCTCACACTTGTGGATGGAGTaGTGCAGCTCCCTGAGTCTCCCCTACCTATGCTGCCCGCCTTGG +
Preference number: 5 (lower is better)
Translates to: PAFPVGIKFSHLWME*CSSLSLPYLCCPPW
Trigger: CCAAGGCGGGCAGCATAGGTAGGGGAGACTCAGGGAGCTGCACCACTCCATCCACAAGTGTGAGAATTTGATACCAACAGGGAACGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS CCA 90 bp AGCCTGACGATGACAGAGAAGAGGGGGCTCCCAGAGACACTTGACTaGGCACCCTTACCAAGAAACATGCAGACCACAAAGGGGCAGCAA +
Preference number: 5 (lower is better)
Translates to: SLTMTEKRGLPETLD*APLPRNMQTTKGQQ
Trigger: TTGCTGCCCCTTTGTGGTCTGCATGTTTCTTGGTAAGGGTGCCCAGTCAAGTGTCTCTGGGAGCCCCCTCTTCTCTGTCATCGTCAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
CDS TCA 90 bp AAGAAGTGGGTTAAGGTCACAGCCTCCCGGCTCCCAAGGACCCCCTaGGAACAGTTGCTTTGGAAAGGTCACTCAGATGTGAACCAGAGG +
Preference number: 5 (lower is better)
Translates to: KKWVKVTASRLPRTP*EQLLWKGHSDVNQR
Trigger: CCTCTGGTTCACATCTGAGTGACCTTTCCAAAGCAACTGTTCTCAGGGGGTCCTTGGGAGCCGGGAGGCTGTGACCTTAACCCACTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS CCA 90 bp CCTGTCCTACCTGCGTTCCCTGTTGGTATCAAATTCTCACACTTGTaGATGGAGTGGTGCAGCTCCCTGAGTCTCCCCTACCTATGCTGC +
Preference number: 5 (lower is better)
Translates to: PVLPAFPVGIKFSHL*MEWCSSLSLPYLCC
Trigger: GCAGCATAGGTAGGGGAGACTCAGGGAGCTGCACCACTCCATCCACAAGTGTGAGAATTTGATACCAACAGGGAACGCAGGTAGGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS TCA 90 bp GACCCTGGGCATTTGGAACTGAACACGAGCCTTTCTAAGCACCCCTaGCTCACAGCATCAAGGAGAGGCTGGGGCATATCTGTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: DPGHLELNTSLSKHP*LTASRRGWGISVVS
Trigger: AGAAACCACAGATATGCCCCAGCCTCTCCTTGATGCTGTGAGTCAGGGGTGCTTAGAAAGGCTCGTGTTCAGTTCCAAATGCCCAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS CCA 90 bp CTGTCATCAGTGTCTGATGGGCCCTGTCCTACCTGCGTTCCCTGTTaGTATCAAATTCTCACACTTGTGGATGGAGTGGTGCAGCTCCCT +
Preference number: 5 (lower is better)
Translates to: LSSVSDGPCPTCVPC*YQILTLVDGVVQLP
Trigger: AGGGAGCTGCACCACTCCATCCACAAGTGTGAGAATTTGATACCAACAGGGAACGCAGGTAGGACAGGGCCCATCAGACACTGATGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS TCA 90 bp TCAGTGGCAGAGCTGGTACTGTACCAGGCTGCCTGGATCATAGACTaGTGTTTTTGCCAAGACCAGCCGAAATGTTCCTCTCAGGAGGTG +
Preference number: 5 (lower is better)
Translates to: SVAELVLYQAAWIID*CFCQDQPKCSSQEV
Trigger: CACCTCCTGAGAGGAACATTTCGGCTGGTCTTGGCAAAAACATCAGTCTATGATCCAGGCAGCCTGGTACAGTACCAGCTCTGCCACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS GCA 90 bp CAAGGTCACAGTGGTGTCAGTGGCAGAGCTGGTACTGTACCAGGCTaGCTGGATCATAGACTGATGTTTTTGCCAAGACCAGCCGAAATG +
Preference number: 5 (lower is better)
Translates to: QGHSGVSGRAGTVPG*LDHRLMFLPRPAEM
Trigger: CATTTCGGCTGGTCTTGGCAAAAACATCAGTCTATGATCCAGGCAGCCTGGTACAGTACCAGCTCTGCCACTGACACCACTGTGACCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS GCA 90 bp ACTCTTGCCTTCCTGTCATCAGTGTCTGATGGGCCCTGTCCTACCTaGGTTCCCTGTTGGTATCAAATTCTCACACTTGTGGATGGAGTG +
Preference number: 5 (lower is better)
Translates to: TLAFLSSVSDGPCPT*VPCWYQILTLVDGV
Trigger: CACTCCATCCACAAGTGTGAGAATTTGATACCAACAGGGAACGCAGGTAGGACAGGGCCCATCAGACACTGATGACAGGAAGGCAAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS TCA 90 bp AGAGTGTGTGTGTGTCTTTGTTTGAGATGGAAGGGCAGAAGTCGGTaGGATACCTCTTCCCTTCCCTCATTGTACATCTCAGGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: RVCVCLCLRWKGRSR*DTSSLPSLYISGRW
Trigger: CCACCTCCCTGAGATGTACAATGAGGGAAGGGAAGAGGTATCTCACCGACTTCTGCCCTTCCATCTCAAACAAAGACACACACACACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS GCA 90 bp GGAAAGGATTTCAGAGTTCATACGTTTGTGAAGTGGACTCTGCAGTaGCCAGGAGCTGATCTGTGCGCACACGTATGTGTGCATTCGTGT +
Preference number: 5 (lower is better)
Translates to: GKDFRVHTFVKWTLQ*PGADLCAHVCVHSC
Trigger: ACACGAATGCACACATACGTGTGCGCACAGATCAGCTCCTGGGCACTGCAGAGTCCACTTCACAAACGTATGAACTCTGAAATCCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS CAA 72 bp TCCGGGACCGGGGAGCGGCGTCTTAATTACGGCGCGTaGGCCCAGCGCCGCGGAGCGCCGCGGATGACAGCG +
Preference number: 6 (lower is better)
Translates to: SGTGERRLNYGA*AQRRGAPRMTA
Trigger: CGCTGTCATCCGCGGCGCTCCGCGGCGCTGGGCCAACGCGCCGTAATTAAGACGCCGCTCCCCGGTCCCGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
ENST00000448947.2
CDS CAA 90 bp AGGGAGGGTTCCGGGACCGGGGAGCGGCGTCTTAATTACGGCGCGTaGGCCCAGCGCCGCGGAGCGCCGCGGATGACAGCGGCGGTGGGT +
Preference number: 6 (lower is better)
Translates to: REGSGTGERRLNYGA*AQRRGAPRMTAAVG
Trigger: ACCCACCGCCGCTGTCATCCGCGGCGCTCCGCGGCGCTGGGCCAACGCGCCGTAATTAAGACGCCGCTCCCCGGTCCCGGAACCCTCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
ENST00000448947.2
CDS CAA 72 bp TGGGGGTCTTCCTCCGCAGAATGCAGGCCCACTCCGTaGCTGAAGGGCCTCCTCCTTGGGCCAGGGCGCCTG +
Preference number: 6 (lower is better)
Translates to: WGSSSAECRPTP*LKGLLLGPGRL
Trigger: CAGGCGCCCTGGCCCAAGGAGGAGGCCCTTCAGCAACGGAGTGGGCCTGCATTCTGCGGAGGAAGACCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS CAA 90 bp GCTTGTGCCTGGGGGTCTTCCTCCGCAGAATGCAGGCCCACTCCGTaGCTGAAGGGCCTCCTCCTTGGGCCAGGGCGCCTGCTTCTGCCA +
Preference number: 6 (lower is better)
Translates to: ACAWGSSSAECRPTP*LKGLLLGPGRLLLP
Trigger: TGGCAGAAGCAGGCGCCCTGGCCCAAGGAGGAGGCCCTTCAGCAACGGAGTGGGCCTGCATTCTGCGGAGGAAGACCCCCAGGCACAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS CAA 90 bp GCAGCCACCTCAGTCTCACCCTCCGCAGAATGCAGGCCCACTCCGTaGCTGAAGGGCCTCCTCCTTGGGCCAGGGCGCCTGCTTCTGCCA +
Preference number: 6 (lower is better)
Translates to: AATSVSPSAECRPTP*LKGLLLGPGRLLLP
Trigger: TGGCAGAAGCAGGCGCCCTGGCCCAAGGAGGAGGCCCTTCAGCAACGGAGTGGGCCTGCATTCTGCGGAGGGTGAGACTGAGGTGGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442114.6
CDS TCA 72 bp GGTCTTCCTCCGCAGAATGCAGGCCCACTCCGTTGCTaGAGGGCCTCCTCCTTGGGCCAGGGCGCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: GLPPQNAGPLRC*RASSLGQGACF
Trigger: GAAGCAGGCGCCCTGGCCCAAGGAGGAGGCCCTTCAGCAACGGAGTGGGCCTGCATTCTGCGGAGGAAGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS TCA 72 bp TCTCACCCTCCGCAGAATGCAGGCCCACTCCGTTGCTaGAGGGCCTCCTCCTTGGGCCAGGGCGCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: SHPPQNAGPLRC*RASSLGQGACF
Trigger: GAAGCAGGCGCCCTGGCCCAAGGAGGAGGCCCTTCAGCAACGGAGTGGGCCTGCATTCTGCGGAGGGTGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442114.6
CDS TCA 72 bp CCAGATCCTCCGCAGAATGCAGGCCCACTCCGTTGCTaGAGGGCCTCCTCCTTGGGCCAGGGCGCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: PDPPQNAGPLRC*RASSLGQGACF
Trigger: GAAGCAGGCGCCCTGGCCCAAGGAGGAGGCCCTTCAGCAACGGAGTGGGCCTGCATTCTGCGGAGGATCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448947.2
CDS CCA 72 bp GGGCCAGCGTCTGCACCCAGCCACGTGTCCTGCCCCTaGTGCGCAGGTGGACTGCTTTCCTATGTCTGGGGT +
Preference number: 6 (lower is better)
Translates to: GPASAPSHVSCP*CAGGLLSYVWG
Trigger: ACCCCAGACATAGGAAAGCAGTCCACCTGCGCACCAGGGGCAGGACACGTGGCTGGGTGCAGACGCTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
ENST00000448947.2
CDS TCA 72 bp CAACAACCTCCGCAGAATGCAGGCCCACTCCGTTGCTaGAGGGCCTCCTCCTTGGGCCAGGGCGCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: QQPPQNAGPLRC*RASSLGQGACF
Trigger: GAAGCAGGCGCCCTGGCCCAAGGAGGAGGCCCTTCAGCAACGGAGTGGGCCTGCATTCTGCGGAGGTTGTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439969.2
CDS GCA 72 bp CCAGCGTCTGCACCCAGCCACGTGTCCTGCCCCTGGTaGGCAGGTGGACTGCTTTCCTATGTCTGGGGTGGA +
Preference number: 6 (lower is better)
Translates to: PASAPSHVSCPW*AGGLLSYVWGG
Trigger: TCCACCCCAGACATAGGAAAGCAGTCCACCTGCGCACCAGGGGCAGGACACGTGGCTGGGTGCAGACGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
ENST00000448947.2
CDS GCA 72 bp ACATCCGGGCCAGCGTCTGCACCCAGCCACGTGTCCTaGCCCTGGTGCGCAGGTGGACTGCTTTCCTATGTC +
Preference number: 6 (lower is better)
Translates to: TSGPASAPSHVS*PWCAGGLLSYV
Trigger: GACATAGGAAAGCAGTCCACCTGCGCACCAGGGGCAGGACACGTGGCTGGGTGCAGACGCTGGCCCGGATGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
ENST00000448947.2
CDS CAA 72 bp TCCTCAACAACCTCCGCAGAATGCAGGCCCACTCCGTaGCTGAAGGGCCTCCTCCTTGGGCCAGGGCGCCTG +
Preference number: 6 (lower is better)
Translates to: SSTTSAECRPTP*LKGLLLGPGRL
Trigger: CAGGCGCCCTGGCCCAAGGAGGAGGCCCTTCAGCAACGGAGTGGGCCTGCATTCTGCGGAGGTTGTTGAGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439969.2
CDS CAA 72 bp GTTACCAGATCCTCCGCAGAATGCAGGCCCACTCCGTaGCTGAAGGGCCTCCTCCTTGGGCCAGGGCGCCTG +
Preference number: 6 (lower is better)
Translates to: VTRSSAECRPTP*LKGLLLGPGRL
Trigger: CAGGCGCCCTGGCCCAAGGAGGAGGCCCTTCAGCAACGGAGTGGGCCTGCATTCTGCGGAGGATCTGGTAAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448947.2
CDS CAA 90 bp CTCCCTCCTTCCTCAACAACCTCCGCAGAATGCAGGCCCACTCCGTaGCTGAAGGGCCTCCTCCTTGGGCCAGGGCGCCTGCTTCTGCCA +
Preference number: 6 (lower is better)
Translates to: LPPSSTTSAECRPTP*LKGLLLGPGRLLLP
Trigger: TGGCAGAAGCAGGCGCCCTGGCCCAAGGAGGAGGCCCTTCAGCAACGGAGTGGGCCTGCATTCTGCGGAGGTTGTTGAGGAAGGAGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439969.2
CDS GCA 72 bp CTGGGCGGACTTCCCTTCCCTTCTCCGTGCCTCAAGTaGCAAACGGGGGTACTGCTGCCCTGCGTGCCTTTG +
Preference number: 6 (lower is better)
Translates to: LGGLPFPSPCLK*QTGVLLPCVPL
Trigger: CAAAGGCACGCAGGGCAGCAGTACCCCCGTTTGGCACTTGAGGCACGGAGAAGGGAAGGGAAGTCCGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
CDS CAA 90 bp CTTTCCCACGGTCACAGCCTCAACAAACCCCTGCCCCCTTCTCCTTaGACTGCAGCCACCTCAGTCTCACCCTCCGCAGAATGCAGGCCC +
Preference number: 6 (lower is better)
Translates to: LSHGHSLNKPLPPSP*TAATSVSPSAECRP
Trigger: GGGCCTGCATTCTGCGGAGGGTGAGACTGAGGTGGCTGCAGTCAAAGGAGAAGGGGGCAGGGGTTTGTTGAGGCTGTGACCGTGGGAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442114.6
CDS GCA 72 bp CTGGGGCATATCTGTGGTTTCTCCCTTGAAGGGATCTaGTCTGCTGCCCCAAGCTGGGAGCCCAGGCCTAGG +
Preference number: 6 (lower is better)
Translates to: LGHICGFSLEGI*SAAPSWEPRPR
Trigger: CCTAGGCCTGGGCTCCCAGCTTGGGGCAGCAGAGCAGATCCCTTCAAGGGAGAAACCACAGATATGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS GCA 72 bp TTGACTGCAGCCACCTCAGTCTCACCCTCCGCAGAATaGAGGCCCACTCCGTTGCTGAAGGGCCTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: LTAATSVSPSAE*RPTPLLKGLLL
Trigger: AAGGAGGAGGCCCTTCAGCAACGGAGTGGGCCTGCATTCTGCGGAGGGTGAGACTGAGGTGGCTGCAGTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442114.6
CDS GCA 72 bp CTGGAGGCACCTAGGGTTACCAGATCCTCCGCAGAATaGAGGCCCACTCCGTTGCTGAAGGGCCTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: LEAPRVTRSSAE*RPTPLLKGLLL
Trigger: AAGGAGGAGGCCCTTCAGCAACGGAGTGGGCCTGCATTCTGCGGAGGATCTGGTAACCCTAGGTGCCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448947.2
CDS TCA 72 bp CAAGGAGAGGCTGGGGCATATCTGTGGTTTCTCCCTTaGAGGGATCTGCTCTGCTGCCCCAAGCTGGGAGCC +
Preference number: 6 (lower is better)
Translates to: QGEAGAYLWFLP*RDLLCCPKLGA
Trigger: GGCTCCCAGCTTGGGGCAGCAGAGCAGATCCCTTCAAGGGAGAAACCACAGATATGCCCCAGCCTCTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS GCA 72 bp CAGAGAAGAACTCCCAGAGCCTGCCACCCAACCTGCTaGCCCTCCCCACTGATGAAGGACACTCTGTCTCCA +
Preference number: 6 (lower is better)
Translates to: QRRTPRACHPTC*PSPLMKDTLSP
Trigger: TGGAGACAGAGTGTCCTTCATCAGTGGGGAGGGGCAGCAGGTTGGGTGGCAGGCTCTGGGAGTTCTTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS CCA 72 bp CCAGCGGGCCGGTCTAAATCAGAGGTCCACCTTCACTaGGAGGGCAGTCGGAGAACCCACATTGTCTGCAGA +
Preference number: 6 (lower is better)
Translates to: PAGRSKSEVHLH*EGSRRTHIVCR
Trigger: TCTGCAGACAATGTGGGTTCTCCGACTGCCCTCCCAGTGAAGGTGGACCTCTGATTTAGACCGGCCCGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
CDS CCA 72 bp TTTCATTGCTGTAGCCTCAGTGCCCAGAGCCGTGCCTaGCAACATAGCGGCTGTCTAGGGGTTTCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: FHCCSLSAQSRA*QHSGCLGVSRA
Trigger: GGCCCTGGAAACCCCTAGACAGCCGCTATGTTGCCAGGCACGGCTCTGGGCACTGAGGCTACAGCAATGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS CAA 90 bp CTCACAGCATCAAGGAGAGGCTGGGGCATATCTGTGGTTTCTCCCTaGAAGGGATCTGCTCTGCTGCCCCAAGCTGGGAGCCCAGGCCTA +
Preference number: 6 (lower is better)
Translates to: LTASRRGWGISVVSP*KGSALLPQAGSPGL
Trigger: TAGGCCTGGGCTCCCAGCTTGGGGCAGCAGAGCAGATCCCTTCAAGGGAGAAACCACAGATATGCCCCAGCCTCTCCTTGATGCTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS TCA 72 bp GGGAGGGCAGAGAGCAGTGAGGGTTTGCCCAGGCAGTaGCTTTGGACCCAAGTGTGGAAAGGAACTCCTGCT +
Preference number: 6 (lower is better)
Translates to: GRAESSEGLPRQ*LWTQVWKGTPA
Trigger: AGCAGGAGTTCCTTTCCACACTTGGGTCCAAAGTCACTGCCTGGGCAAACCCTCACTGCTCTCTGCCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS CCA 72 bp ATAAAGCCACTGTTAAACGAGCGGGTCTGGGAGTTCTaGCTGGGCGGACTTCCCTTCCCTTCTCCGTGCCTC +
Preference number: 6 (lower is better)
Translates to: IKPLLNERVWEF*LGGLPFPSPCL
Trigger: GAGGCACGGAGAAGGGAAGGGAAGTCCGCCCAGCCAGAACTCCCAGACCCGCTCGTTTAACAGTGGCTTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
CDS CCA 72 bp TGTCTCAGAGTCTGCCCTGGCAGTCAGTGGCAGAAATaGCACAGTAGGGGGCTCTGTGGCACTCACTGTGTC +
Preference number: 6 (lower is better)
Translates to: CLRVCPGSQWQK*HSRGLCGTHCV
Trigger: GACACAGTGAGTGCCACAGAGCCCCCTACTGTGCCATTTCTGCCACTGACTGCCAGGGCAGACTCTGAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS CAA 72 bp TCAAGGAGAGGCTGGGGCATATCTGTGGTTTCTCCCTaGAAGGGATCTGCTCTGCTGCCCCAAGCTGGGAGC +
Preference number: 6 (lower is better)
Translates to: SRRGWGISVVSP*KGSALLPQAGS
Trigger: GCTCCCAGCTTGGGGCAGCAGAGCAGATCCCTTCAAGGGAGAAACCACAGATATGCCCCAGCCTCTCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS TCA 72 bp AATTCTCACACTTGTGGATGGAGTGGTGCAGCTCCCTaGGTCTCCCCTACCTATGCTGCCCGCCTTGGGCTT +
Preference number: 6 (lower is better)
Translates to: NSHTCGWSGAAP*VSPTYAARLGL
Trigger: AAGCCCAAGGCGGGCAGCATAGGTAGGGGAGACTCAGGGAGCTGCACCACTCCATCCACAAGTGTGAGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS TCA 72 bp GGAAAACTCTCACAGCAGCTCCCTGGCCATGTTTCCTaGGGGAAATCAGGAGCAATGGCCTCTCCAGGGCCA +
Preference number: 6 (lower is better)
Translates to: GKLSQQLPGHVS*GKSGAMASPGP
Trigger: TGGCCCTGGAGAGGCCATTGCTCCTGATTTCCCTCAGGAAACATGGCCAGGGAGCTGCTGTGAGAGTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS GCA 72 bp AGTGCCCAGGAGCTGATCTGTGCGCACACGTATGTGTaGATTCGTGTGTCATGGACTAACCGCTGGGGCATG +
Preference number: 6 (lower is better)
Translates to: SAQELICAHTYV*IRVSWTNRWGM
Trigger: CATGCCCCAGCGGTTAGTCCATGACACACGAATGCACACATACGTGTGCGCACAGATCAGCTCCTGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS CCA 72 bp GTGCTGCTCATAAAGCCACTGTTAAACGAGCGGGTCTaGGAGTTCTGGCTGGGCGGACTTCCCTTCCCTTCT +
Preference number: 6 (lower is better)
Translates to: VLLIKPLLNERV*EFWLGGLPFPS
Trigger: AGAAGGGAAGGGAAGTCCGCCCAGCCAGAACTCCCAGACCCGCTCGTTTAACAGTGGCTTTATGAGCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
CDS CCA 72 bp ACCTCTTCCCTTCCCTCATTGTACATCTCAGGGAGGTaGGGACTCGGGGAAAACTCTCACAGCAGCTCCCTG +
Preference number: 6 (lower is better)
Translates to: TSSLPSLYISGR*GLGENSHSSSL
Trigger: CAGGGAGCTGCTGTGAGAGTTTTCCCCGAGTCCCCACCTCCCTGAGATGTACAATGAGGGAAGGGAAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS CAA 90 bp GGCCCTGTCCTACCTGCGTTCCCTGTTGGTATCAAATTCTCACACTaGTGGATGGAGTGGTGCAGCTCCCTGAGTCTCCCCTACCTATGC +
Preference number: 6 (lower is better)
Translates to: GPVLPAFPVGIKFSH*WMEWCSSLSLPYLC
Trigger: GCATAGGTAGGGGAGACTCAGGGAGCTGCACCACTCCATCCACAAGTGTGAGAATTTGATACCAACAGGGAACGCAGGTAGGACAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS TCA 72 bp GGACCTCAGGAAAGAATTGCTGATAGAGGAGAGCTCTaGGCCTGGTTTTGGGGGAAGGAGCTGATGGCCAAG +
Preference number: 6 (lower is better)
Translates to: GPQERIADRGEL*AWFWGKELMAK
Trigger: CTTGGCCATCAGCTCCTTCCCCCAAAACCAGGCTCAGAGCTCTCCTCTATCAGCAATTCTTTCCTGAGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
CDS CCA 72 bp TGTGTAAATGGCTTCCCAAGGTCACAGTGGTGTCAGTaGCAGAGCTGGTACTGTACCAGGCTGCCTGGATCA +
Preference number: 6 (lower is better)
Translates to: CVNGFPRSQWCQ*QSWYCTRLPGS
Trigger: TGATCCAGGCAGCCTGGTACAGTACCAGCTCTGCCACTGACACCACTGTGACCTTGGGAAGCCATTTACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS CCA 72 bp CCTGCGTTCCCTGTTGGTATCAAATTCTCACACTTGTaGATGGAGTGGTGCAGCTCCCTGAGTCTCCCCTAC +
Preference number: 6 (lower is better)
Translates to: PAFPVGIKFSHL*MEWCSSLSLPY
Trigger: GTAGGGGAGACTCAGGGAGCTGCACCACTCCATCCACAAGTGTGAGAATTTGATACCAACAGGGAACGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS CAA 90 bp AGAGCTGGTACTGTACCAGGCTGCCTGGATCATAGACTGATGTTTTaGCCAAGACCAGCCGAAATGTTCCTCTCAGGAGGTGGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: RAGTVPGCLDHRLMF*PRPAEMFLSGGGRW
Trigger: CCACCTGCCACCTCCTGAGAGGAACATTTCGGCTGGTCTTGGCAAAAACATCAGTCTATGATCCAGGCAGCCTGGTACAGTACCAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS CCA 72 bp CCTGTTGGTATCAAATTCTCACACTTGTGGATGGAGTaGTGCAGCTCCCTGAGTCTCCCCTACCTATGCTGC +
Preference number: 6 (lower is better)
Translates to: PVGIKFSHLWME*CSSLSLPYLCC
Trigger: GCAGCATAGGTAGGGGAGACTCAGGGAGCTGCACCACTCCATCCACAAGTGTGAGAATTTGATACCAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS CCA 72 bp GTGTCTGATGGGCCCTGTCCTACCTGCGTTCCCTGTTaGTATCAAATTCTCACACTTGTGGATGGAGTGGTG +
Preference number: 6 (lower is better)
Translates to: VSDGPCPTCVPC*YQILTLVDGVV
Trigger: CACCACTCCATCCACAAGTGTGAGAATTTGATACCAACAGGGAACGCAGGTAGGACAGGGCCCATCAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS CAA 90 bp CTGCCAGAAACACTCTGTCTTCCTGCTTTGAGGACAGCTGAAGTCTaGCCACTTCTTCTGGATGCTCTGACCATCAGTAAGGTGGGCTGC +
Preference number: 6 (lower is better)
Translates to: LPETLCLPALRTAEV*PLLLDALTISKVGC
Trigger: GCAGCCCACCTTACTGATGGTCAGAGCATCCAGAAGAAGTGGCAAGACTTCAGCTGTCCTCAAAGCAGGAAGACAGAGTGTTTCTGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
CDS CAA 90 bp CCTCTCTCCTCCCTCAAACTGGAGGCACCTAGGGTTACCAGATCTTaGCTTGTGCTGTTCTTTCTGCCAGAAACACTCTGTCTTCCTGCT +
Preference number: 6 (lower is better)
Translates to: PLSSLKLEAPRVTRS*LVLFFLPETLCLPA
Trigger: AGCAGGAAGACAGAGTGTTTCTGGCAGAAAGAACAGCACAAGCAAAGATCTGGTAACCCTAGGTGCCTCCAGTTTGAGGGAGGAGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
CDS TCA 72 bp CATTTGGAACTGAACACGAGCCTTTCTAAGCACCCCTaGCTCACAGCATCAAGGAGAGGCTGGGGCATATCT +
Preference number: 6 (lower is better)
Translates to: HLELNTSLSKHP*LTASRRGWGIS
Trigger: AGATATGCCCCAGCCTCTCCTTGATGCTGTGAGTCAGGGGTGCTTAGAAAGGCTCGTGTTCAGTTCCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS GCA 72 bp AGTGGTGTCAGTGGCAGAGCTGGTACTGTACCAGGCTaGCTGGATCATAGACTGATGTTTTTGCCAAGACCA +
Preference number: 6 (lower is better)
Translates to: SGVSGRAGTVPG*LDHRLMFLPRP
Trigger: TGGTCTTGGCAAAAACATCAGTCTATGATCCAGGCAGCCTGGTACAGTACCAGCTCTGCCACTGACACCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS GCA 72 bp TTCAGAGTTCATACGTTTGTGAAGTGGACTCTGCAGTaGCCAGGAGCTGATCTGTGCGCACACGTATGTGTG +
Preference number: 6 (lower is better)
Translates to: FRVHTFVKWTLQ*PGADLCAHVCV
Trigger: CACACATACGTGTGCGCACAGATCAGCTCCTGGGCACTGCAGAGTCCACTTCACAAACGTATGAACTCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS CCA 72 bp GCAGGAAAGGATTTCAGAGTTCATACGTTTGTGAAGTaGACTCTGCAGTGCCCAGGAGCTGATCTGTGCGCA +
Preference number: 6 (lower is better)
Translates to: AGKDFRVHTFVK*TLQCPGADLCA
Trigger: TGCGCACAGATCAGCTCCTGGGCACTGCAGAGTCCACTTCACAAACGTATGAACTCTGAAATCCTTTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS CAA 72 bp TCCACCTTCACTGGGAGGGCAGTCGGAGAACCCACATaGTCTGCAGACTCTCACATTCAACCTAAAACCCAT +
Preference number: 6 (lower is better)
Translates to: STFTGRAVGEPT*SADSHIQPKTH
Trigger: ATGGGTTTTAGGTTGAATGTGAGAGTCTGCAGACAATGTGGGTTCTCCGACTGCCCTCCCAGTGAAGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
CDS GCA 72 bp CCCTCAAACTGGAGGCACCTAGGGTTACCAGATCTTTaGTTGTGCTGTTCTTTCTGCCAGAAACACTCTGTC +
Preference number: 6 (lower is better)
Translates to: PSNWRHLGLPDL*LCCSFCQKHSV
Trigger: GACAGAGTGTTTCTGGCAGAAAGAACAGCACAAGCAAAGATCTGGTAACCCTAGGTGCCTCCAGTTTGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
CDS GCA 72 bp TTCCTGTCATCAGTGTCTGATGGGCCCTGTCCTACCTaGGTTCCCTGTTGGTATCAAATTCTCACACTTGTG +
Preference number: 6 (lower is better)
Translates to: FLSSVSDGPCPT*VPCWYQILTLV
Trigger: CACAAGTGTGAGAATTTGATACCAACAGGGAACGCAGGTAGGACAGGGCCCATCAGACACTGATGACAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS GCA 72 bp TGGAGTCCTTTTGACCCCAAAGCACGACTAGCTTCTTaGTGTCCAGGTTTCCACTCAAATGTCACCACCTCA +
Preference number: 6 (lower is better)
Translates to: WSPFDPKARLAS*CPGFHSNVTTS
Trigger: TGAGGTGGTGACATTTGAGTGGAAACCTGGACAGCAAGAAGCTAGTCGTGCTTTGGGGTCAAAAGGACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS CCA 72 bp ACGTATGTGTGCATTCGTGTGTCATGGACTAACCGCTaGGGCATGAAGCCCACCCCTATTTTGACCAAAGAA +
Preference number: 6 (lower is better)
Translates to: TYVCIRVSWTNR*GMKPTPILTKE
Trigger: TTCTTTGGTCAAAATAGGGGTGGGCTTCATGCCCCAGCGGTTAGTCCATGACACACGAATGCACACATACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS CAA 90 bp AATCAGAGGTCCACCTTCACTGGGAGGGCAGTCGGAGAACCCACATaGTCTGCAGACTCTCACATTCAACCTAAAACCCATGTACTCATT +
Preference number: 6 (lower is better)
Translates to: NQRSTFTGRAVGEPT*SADSHIQPKTHVLI
Trigger: AATGAGTACATGGGTTTTAGGTTGAATGTGAGAGTCTGCAGACAATGTGGGTTCTCCGACTGCCCTCCCAGTGAAGGTGGACCTCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
CDS CAA 90 bp AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTGTGTGTGTCTTaGTTTGAGATGGAAGGGCAGAAGTCGGTGAGATACCTCTTCCCT +
Preference number: 6 (lower is better)
Translates to: RERERERERESVCVS*FEMEGQKSVRYLFP
Trigger: AGGGAAGAGGTATCTCACCGACTTCTGCCCTTCCATCTCAAACAAAGACACACACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS GCA 72 bp AACTGGAGGCACCTAGGGTTACCAGATCTTTGCTTGTaGTGTTCTTTCTGCCAGAAACACTCTGTCTTCCTG +
Preference number: 6 (lower is better)
Translates to: NWRHLGLPDLCL*CSFCQKHSVFL
Trigger: CAGGAAGACAGAGTGTTTCTGGCAGAAAGAACAGCACAAGCAAAGATCTGGTAACCCTAGGTGCCTCCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
CDS CAA 72 bp TCCCTCAAACTGGAGGCACCTAGGGTTACCAGATCTTaGCTTGTGCTGTTCTTTCTGCCAGAAACACTCTGT +
Preference number: 6 (lower is better)
Translates to: SLKLEAPRVTRS*LVLFFLPETLC
Trigger: ACAGAGTGTTTCTGGCAGAAAGAACAGCACAAGCAAAGATCTGGTAACCCTAGGTGCCTCCAGTTTGAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
CDS TCA 72 bp TTTGAGCAGGAAAGGATTTCAGAGTTCATACGTTTGTaGAGTGGACTCTGCAGTGCCCAGGAGCTGATCTGT +
Preference number: 6 (lower is better)
Translates to: FEQERISEFIRL*SGLCSAQELIC
Trigger: ACAGATCAGCTCCTGGGCACTGCAGAGTCCACTTCACAAACGTATGAACTCTGAAATCCTTTCCTGCTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS TCA 72 bp GTGTGTCTTTGTTTGAGATGGAAGGGCAGAAGTCGGTaGGATACCTCTTCCCTTCCCTCATTGTACATCTCA +
Preference number: 6 (lower is better)
Translates to: VCLCLRWKGRSR*DTSSLPSLYIS
Trigger: TGAGATGTACAATGAGGGAAGGGAAGAGGTATCTCACCGACTTCTGCCCTTCCATCTCAAACAAAGACACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS CAA 72 bp TCAAACTGGAGGCACCTAGGGTTACCAGATCTTTGCTaGTGCTGTTCTTTCTGCCAGAAACACTCTGTCTTC +
Preference number: 6 (lower is better)
Translates to: SNWRHLGLPDLC*CCSFCQKHSVF
Trigger: GAAGACAGAGTGTTTCTGGCAGAAAGAACAGCACAAGCAAAGATCTGGTAACCCTAGGTGCCTCCAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336600.6
ENST00000439969.2
ENST00000442114.6
CDS CCA 72 bp TTTACATATGGAGAAACTGAGACCCATATGTGTAAATaGCTTCCCAAGGTCACAGTGGTGTCAGTGGCAGAG +
Preference number: 6 (lower is better)
Translates to: FTYGETETHMCK*LPKVTVVSVAE
Trigger: CTCTGCCACTGACACCACTGTGACCTTGGGAAGCCATTTACACATATGGGTCTCAGTTTCTCCATATGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336600.6
CDS GCA 72 bp CCGACCTTTTTCCTATGTTACCACAGAGAACAGAGATaGCACATGATTTACAATTTAAACAAGAGGATTCAC +
Preference number: 6 (lower is better)
Translates to: PTFFLCYHREQR*HMIYNLNKRIH
Trigger: GTGAATCCTCTTGTTTAAATTGTAAATCATGTGGCATCTCTGTTCTCTGTGGTAACATAGGAAAAAGGTCGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336600.6