RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C6ORF132 (Homo sapiens)

Ensembl gene IDs: ENSG00000188112

Ensembl transcript IDs: ENST00000341865.9, ENST00000356542.5

Found 438 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGGGATGGCAGGTGATGGAGGCTAAAGATCTCCCTTCGGTGCCCTaGACACCCACCAGACAGAGCTGGGCCTCAGCCCTTTGCAAGGGC +
Preference number: 1 (lower is better)
Translates to: LGWQVMEAKDLPSVP*TPTRQSWASALCKG
Trigger: GCCCTTGCAAAGGGCTGAGGCCCAGCTCTGTCTGGTGGGTGTGCAGGGCACCGAAGGGAGATCTTTAGCCTCCATCACCTGCCATCCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR GCA 90 bp CCTGGTCCCACCTCAATGCGGCTAGGAACCCCAGGTGTCCACTCTTaGTTGGGATGGCAGGTGATGGAGGCTAAAGATCTCCCTTCGGTG +
Preference number: 1 (lower is better)
Translates to: PGPTSMRLGTPGVHS*LGWQVMEAKDLPSV
Trigger: CACCGAAGGGAGATCTTTAGCCTCCATCACCTGCCATCCCAAGCAAGAGTGGACACCTGGGGTTCCTAGCCGCATTGAGGTGGGACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR CCA 90 bp GGGAACTACTTTCTGGCTGGCCCCCACCAGCCTGCTCCTCTGAAATaGGCACTCTCCAGTCCTTCCTTCTTACTGAGGCAGCCCACCTTG +
Preference number: 1 (lower is better)
Translates to: GNYFLAGPHQPAPLK*ALSSPSFLLRQPTL
Trigger: CAAGGTGGGCTGCCTCAGTAAGAAGGAAGGACTGGAGAGTGCCCATTTCAGAGGAGCAGGCTGGTGGGGGCCAGCCAGAAAGTAGTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR TCA 90 bp GCACACCCACCAGACAGAGCTGGGCCTCAGCCCTTTGCAAGGGCCTaGCAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGT +
Preference number: 1 (lower is better)
Translates to: AHPPDRAGPQPFARA*QAITAISMGSSSVS
Trigger: ACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCCTTGCAAAGGGCTGAGGCCCAGCTCTGTCTGGTGGGTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR CCA 90 bp ACCTCAATGCGGCTAGGAACCCCAGGTGTCCACTCTTGCTTGGGATaGCAGGTGATGGAGGCTAAAGATCTCCCTTCGGTGCCCTGCACA +
Preference number: 1 (lower is better)
Translates to: TSMRLGTPGVHSCLG*QVMEAKDLPSVPCT
Trigger: TGTGCAGGGCACCGAAGGGAGATCTTTAGCCTCCATCACCTGCCATCCCAAGCAAGAGTGGACACCTGGGGTTCCTAGCCGCATTGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR CCA 90 bp CCCACTCTCGGTCTTCCTGGGCCACTGCTTCTCATCGTTGGTCTTTaGGGATCAAAGACTCCTCTGTGTCTGAGTCAGGTCGCCCAACAC +
Preference number: 1 (lower is better)
Translates to: PTLGLPGPLLLIVGL*GSKTPLCLSQVAQH
Trigger: GTGTTGGGCGACCTGACTCAGACACAGAGGAGTCTTTGATCCCCAAAGACCAACGATGAGAAGCAGTGGCCCAGGAAGACCGAGAGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR GCA 90 bp CTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTaGCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTG +
Preference number: 1 (lower is better)
Translates to: LTGNHSYLDGFQFSQ*PTPCFQNLLSRPCL
Trigger: CAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR CCA 90 bp ACAGAAGCCCACTCTCGGTCTTCCTGGGCCACTGCTTCTCATCGTTaGTCTTTGGGGATCAAAGACTCCTCTGTGTCTGAGTCAGGTCGC +
Preference number: 1 (lower is better)
Translates to: TEAHSRSSWATASHR*SLGIKDSSVSESGR
Trigger: GCGACCTGACTCAGACACAGAGGAGTCTTTGATCCCCAAAGACCAACGATGAGAAGCAGTGGCCCAGGAAGACCGAGAGTGGGCTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR CCA 90 bp CTCAGCCCTTTGCAAGGGCCTGACAGGCAATCACAGCTATCTCGATaGGTTCCAGTTCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCT +
Preference number: 1 (lower is better)
Translates to: LSPLQGPDRQSQLSR*VPVQSVPHPLLSEP
Trigger: AGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCCTTGCAAAGGGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR CCA 90 bp GCACTCTCCAGTCCTTCCTTCTTACTGAGGCAGCCCACCTTGACCTaGTCCCAGGAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCA +
Preference number: 1 (lower is better)
Translates to: ALSSPSFLLRQPTLT*SQEFGPPVPEDREA
Trigger: TGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTCCTGGGACCAGGTCAAGGTGGGCTGCCTCAGTAAGAAGGAAGGACTGGAGAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR GCA 90 bp AACTGGCCTGTTTATCTTCCAAGTCAAGTGAGACTCAGCCTTCCCTaGCCACCCCAGAGCAATATACAGCTGAGAGTCTACGCCCCACCC +
Preference number: 1 (lower is better)
Translates to: NWPVYLPSQVRLSLP*PPQSNIQLRVYAPP
Trigger: GGGTGGGGCGTAGACTCTCAGCTGTATATTGCTCTGGGGTGGGCAGGGAAGGCTGAGTCTCACTTGACTTGGAAGATAAACAGGCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR CCA 90 bp CACCCCACACATGGTCCTTCTCCACATGTTATACATACACATTCCTaGTCCCACCTCAATGCGGCTAGGAACCCCAGGTGTCCACTCTTG +
Preference number: 1 (lower is better)
Translates to: HPTHGPSPHVIHTHS*SHLNAARNPRCPLL
Trigger: CAAGAGTGGACACCTGGGGTTCCTAGCCGCATTGAGGTGGGACCAGGAATGTGTATGTATAACATGTGGAGAAGGACCATGTGTGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR CCA 90 bp GGGCTTCCATTCCACATGTGGGAGCTTCACTCCCCACCCCACACATaGTCCTTCTCCACATGTTATACATACACATTCCTGGTCCCACCT +
Preference number: 1 (lower is better)
Translates to: GLPFHMWELHSPPHT*SFSTCYTYTFLVPP
Trigger: AGGTGGGACCAGGAATGTGTATGTATAACATGTGGAGAAGGACCATGTGTGGGGTGGGGAGTGAAGCTCCCACATGTGGAATGGAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR TCA 90 bp CATGGCTCCTTGGGCCCAGTCCCCAAAATCAGGGCTGCACAGGTCTaGATAGCAAAGCCAGGCTTAACCTTGTTTCCCATCCTAAACTTG +
Preference number: 1 (lower is better)
Translates to: HGSLGPVPKIRAAQV*IAKPGLTLFPILNL
Trigger: CAAGTTTAGGATGGGAAACAAGGTTAAGCCTGGCTTTGCTATTCAGACCTGTGCAGCCCTGATTTTGGGGACTGGGCCCAAGGAGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR GCA 90 bp CCCCAACAGCAGCAAGCTTCTTCAGACCTCCATTCCCATCTCTGCTaGCTCCACTCTCCAAGGCTTTCTAGCATCTTAAGGCATCAAGAG +
Preference number: 1 (lower is better)
Translates to: PQQQQASSDLHSHLC*LHSPRLSSILRHQE
Trigger: CTCTTGATGCCTTAAGATGCTAGAAAGCCTTGGAGAGTGGAGGCAGCAGAGATGGGAATGGAGGTCTGAAGAAGCTTGCTGCTGTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR CCA 90 bp ATGAATGTTTTAGTATTTTACCGACTGGTAGAGGTGTGTCAACTCTaGGCCCACACTGCTATGAATCTGGGTATGTGTGCTGAGGGTAAG +
Preference number: 1 (lower is better)
Translates to: MNVLVFYRLVEVCQL*AHTAMNLGMCAEGK
Trigger: CTTACCCTCAGCACACATACCCAGATTCATAGCAGTGTGGGCCCAGAGTTGACACACCTCTACCAGTCGGTAAAATACTAAAACATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356542.5
3UTR TCA 90 bp CACTCTCCAAGGCTTTCTAGCATCTTAAGGCATCAAGAGTATTGGTaGCTTGTAGTATCAGTGTTAGGAAAAATGCCTTCTCCAAATCCC +
Preference number: 1 (lower is better)
Translates to: HSPRLSSILRHQEYW*LVVSVLGKMPSPNP
Trigger: GGGATTTGGAGAAGGCATTTTTCCTAACACTGATACTACAAGTCACCAATACTCTTGATGCCTTAAGATGCTAGAAAGCCTTGGAGAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR CAA 90 bp GCCCACTCTCGGTCTTCCTGGGCCACTGCTTCTCATCGTTGGTCTTaGGGGATCAAAGACTCCTCTGTGTCTGAGTCAGGTCGCCCAACA +
Preference number: 2 (lower is better)
Translates to: AHSRSSWATASHRWS*GIKDSSVSESGRPT
Trigger: TGTTGGGCGACCTGACTCAGACACAGAGGAGTCTTTGATCCCCAAAGACCAACGATGAGAAGCAGTGGCCCAGGAAGACCGAGAGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR GCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAACTCCCTTCGGTGCCCTaGACACCCACCAGACAGAGC +
Preference number: 2 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQLPSVP*TPTRQS
Trigger: GCTCTGTCTGGTGGGTGTGCAGGGCACCGAAGGGAG...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR CAA 90 bp AAATGGGCACTCTCCAGTCCTTCCTTCTTACTGAGGCAGCCCACCTaGACCTGGTCCCAGGAATTTGGCCCACCAGTACCTGAAGATAGG +
Preference number: 2 (lower is better)
Translates to: KWALSSPSFLLRQPT*TWSQEFGPPVPEDR
Trigger: CCTATCTTCAGGTACTGGTGGGCCAAATTCCTGGGACCAGGTCAAGGTGGGCTGCCTCAGTAAGAAGGAAGGACTGGAGAGTGCCCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR CCA 90 bp CGACTGGTAGAGGTGTGTCAACTCTGGGCCCACACTGCTATGAATCTGGGTATGATTTGCCGGGCATGGTaGTGGGCACCTGTAATCCCA +
Preference number: 2 (lower is better)
Translates to: RLVEVCQLWAHTAMNLGMICRAW*WAPVIP
Trigger: TGGGATTACAGGTGCCCACCACCATGCCCGGCAAAT...CATACCCAGATTCATAGCAGTGTGGGCCCAGAGTTGACACACCTCTACCAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356542.5
3UTR-3UTR TCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCAGACTCCTCTGTGTCTaGGTCAGGTCGCCCAACACC +
Preference number: 2 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLRLLCV*VRSPNT
Trigger: GGTGTTGGGCGACCTGACTCAGACACAGAGGAGTCT...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR GCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTAGGTCGCCCAACACCTaGTGTGTACCTCCCACCCCC +
Preference number: 2 (lower is better)
Translates to: EFGPPVPEDREARPRNIVRSPNT*CVPPTP
Trigger: GGGGGTGGGAGGTACACAGCAGGTGTTGGGCGACCT...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR GCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCCCAGGTGTCCACTCTTaGTTGGGATGGCAGGTGATG +
Preference number: 2 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLPGVHS*LGWQVM
Trigger: CATCACCTGCCATCCCAAGCAAGAGTGGACACCTGG...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR CCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAACACTCTCGGTCTTCCTaGGCCACTGCTTCTCATCGT +
Preference number: 2 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQHSRSS*ATASHR
Trigger: ACGATGAGAAGCAGTGGCCCAGGAAGACCGAGAGTG...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR CCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAACTTCCATTCCACATGTaGGAGCTTCACTCCCCACCC +
Preference number: 2 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQLPFHM*ELHSPP
Trigger: GGGTGGGGAGTGAAGCTCCCACATGTGGAATGGAAG...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR TCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAAAGGGCTGCACAGGTCTaGATAGCAAAGCCAGGCTTA +
Preference number: 2 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQRAAQV*IAKPGL
Trigger: TAAGCCTGGCTTTGCTATTCAGACCTGTGCAGCCCT...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR GCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAATTCCAGTTCAGTCAGTaGCCCACCCCTTGCTTTCAG +
Preference number: 2 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQFQFSQ*PTPCFQ
Trigger: CTGAAAGCAAGGGGTGGGGCACTGACTGAACTGGAA...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR CCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAAGTCACACCAGCGCTTTaGGAAACAGAAGCCCACTCT +
Preference number: 2 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQVTPAL*ETEAHS
Trigger: AGAGTGGGCTTCTGTTTCCCAAAGCGCTGGTGTGAC...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR CCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTCCCACCAGACAGAGCTaGGCCTCAGCCCTTTGCAAG +
Preference number: 2 (lower is better)
Translates to: EFGPPVPEDREARPRNIVPTRQS*ASALCK
Trigger: CTTGCAAAGGGCTGAGGCCCAGCTCTGTCTGGTGGG...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR CCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAAAGACTCATGGCTCCTTaGGCCCAGTCCCCAAAATCA +
Preference number: 2 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQRLMAP*AQSPKS
Trigger: TGATTTTGGGGACTGGGCCCAAGGAGCCATGAGTCT...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR CCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAAGCTCTGTCGCCAGGCTaGAGTGCAATTGTGCAATCT +
Preference number: 2 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQALSPG*SAIVQS
Trigger: AGATTGCACAATTGCACTCCAGCCTGGCGACAGAGC...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR TCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTCCCTTTGCAAGGGCCTaGCAGGCAATCACAGCTATC +
Preference number: 2 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASPFARA*QAITAI
Trigger: GATAGCTGTGATTGCCTGTCAGGCCCTTGCAAAGGG...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR TCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTGCTTGGGATGGCAGGTaGTGGAGGCTAAAGATCTCC +
Preference number: 2 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASAWDGR*WRLKIS
Trigger: GGAGATCTTTAGCCTCCATCACCTGCCATCCCAAGC...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR GCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTTGGGCCTCAGCCCTTTaGAAGGGCCTGACAGGCAAT +
Preference number: 2 (lower is better)
Translates to: EFGPPVPEDREARPRNIVWASAL*KGLTGN
Trigger: ATTGCCTGTCAGGCCCTTGCAAAGGGCTGAGGCCCA...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR CCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTTCCCACCTCTGCCCTTaGCCAATGCAAAGGGCTTCC +
Preference number: 2 (lower is better)
Translates to: EFGPPVPEDREARPRNIVSHLCP*PMQRAS
Trigger: GGAAGCCCTTTGCATTGGCCAAGGGCAGAGGTGGGA...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR TCA 90 bp AATGTTTTAGTATTTTACCGACTGGTAGAGGTGTGTCAACTCTGGGCCCACACTGGTTTGTGGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: NVLVFYRLVEVCQLWAHTGLWIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCCACAAACC...AGTGTGGGCCCAGAGTTGACACACCTCTACCAGTCGGTAAAATACTAAAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356542.5
3UTR-3UTR GCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTTCAATCTCCCACCTCTaGCCTTGGCCAATGCAAAGG +
Preference number: 2 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASSISHL*PWPMQR
Trigger: CCTTTGCATTGGCCAAGGGCAGAGGTGGGAGATTGA...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR GCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTCATTCCCATCTCTGCTaGCTCCACTCTCCAAGGCTT +
Preference number: 2 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASHSHLC*LHSPRL
Trigger: AAGCCTTGGAGAGTGGAGGCAGCAGAGATGGGAATG...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR CCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAACTCATCGTTGGTCTTTaGGGATCAAAGACTCCTCTG +
Preference number: 2 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQLIVGL*GSKTPL
Trigger: CAGAGGAGTCTTTGATCCCCAAAGACCAACGATGAG...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR CCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAATCACAGCTATCTCGATaGGTTCCAGTTCAGTCAGTG +
Preference number: 2 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQSQLSR*VPVQSV
Trigger: CACTGACTGAACTGGAACCCATCGAGATAGCTGTGA...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR CCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCATACATACACATTCCTaGTCCCACCTCAATGCGGCT +
Preference number: 2 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLIHTHS*SHLNAA
Trigger: AGCCGCATTGAGGTGGGACCAGGAATGTGTATGTAT...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR GCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTCTTGCTTTCAGAACCTaGTCAGTAGGCCGTGCTTGT +
Preference number: 2 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASLAFRT*SVGRAC
Trigger: ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAG...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR GCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTTCTGCCCTTGGCCAATaGAAAGGGCTTCCATTCCAC +
Preference number: 2 (lower is better)
Translates to: EFGPPVPEDREARPRNIVSALGQ*KGLPFH
Trigger: GTGGAATGGAAGCCCTTTGCATTGGCCAAGGGCAGA...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR CCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAAACTGCTTCTCATCGTTaGTCTTTGGGGATCAAAGAC +
Preference number: 2 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQTASHR*SLGIKD
Trigger: GTCTTTGATCCCCAAAGACCAACGATGAGAAGCAGT...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR CCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTTCCCCACCCCACACATaGTCCTTCTCCACATGTTAT +
Preference number: 2 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASSPPHT*SFSTCY
Trigger: ATAACATGTGGAGAAGGACCATGTGTGGGGTGGGGA...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR GCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTGTCTTCCTGGGCCACTaGTTCTCATCGTTGGTCTTT +
Preference number: 2 (lower is better)
Translates to: EFGPPVPEDREARPRNIVVFLGH*FSSLVF
Trigger: AAAGACCAACGATGAGAAGCAGTGGCCCAGGAAGAC...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR CCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTATCCCATATGAGACCTaGCCATGTAAGGCCCCTAGT +
Preference number: 2 (lower is better)
Translates to: EFGPPVPEDREARPRNIVIPYET*PCKAPS
Trigger: ACTAGGGGCCTTACATGGCCAGGTCTCATATGGGAT...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR CCA 90 bp AATGTTTTAGTATTTTACCGACTGGTAGAGGTGTGTCAACTCTGGGCCCACACTAAAATTTGCCGGGCATaGTGGTGGGCACCTGTAATC +
Preference number: 2 (lower is better)
Translates to: NVLVFYRLVEVCQLWAHTKICRA*WWAPVI
Trigger: GATTACAGGTGCCCACCACCATGCCCGGCAAATTTT...AGTGTGGGCCCAGAGTTGACACACCTCTACCAGTCGGTAAAATACTAAAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356542.5
3UTR-3UTR GCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTCCCCAAAATCAGGGCTaGACAGGTCTGAATAGCAAA +
Preference number: 2 (lower is better)
Translates to: EFGPPVPEDREARPRNIVPQNQG*TGLNSK
Trigger: TTTGCTATTCAGACCTGTGCAGCCCTGATTTTGGGG...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR TCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAACATCAAGAGTATTGGTaGCTTGTAGTATCAGTGTTA +
Preference number: 2 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQHQEYW*LVVSVL
Trigger: TAACACTGATACTACAAGTCACCAATACTCTTGATG...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR CCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTAAAGACACAGTTTGTTaGAGTAGAGCTAAGAGAACC +
Preference number: 2 (lower is better)
Translates to: EFGPPVPEDREARPRNIVKDTVC*SRAKRT
Trigger: GGTTCTCTTAGCTCTACTCCAACAAACTGTGTCTTT...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR GCA 72 bp CAGGTGATGGAGGCTAAAGATCTCCCTTCGGTGCCCTaGACACCCACCAGACAGAGCTGGGCCTCAGCCCTT +
Preference number: 3 (lower is better)
Translates to: QVMEAKDLPSVP*TPTRQSWASAL
Trigger: AAGGGCTGAGGCCCAGCTCTGTCTGGTGGGTGTGCAGGGCACCGAAGGGAGATCTTTAGCCTCCATCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR TCA 72 bp CCAGACAGAGCTGGGCCTCAGCCCTTTGCAAGGGCCTaGCAGGCAATCACAGCTATCTCGATGGGTTCCAGT +
Preference number: 3 (lower is better)
Translates to: PDRAGPQPFARA*QAITAISMGSS
Trigger: ACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCCTTGCAAAGGGCTGAGGCCCAGCTCTGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR GCA 72 bp TGCACACCCACCAGACAGAGCTGGGCCTCAGCCCTTTaGAAGGGCCTGACAGGCAATCACAGCTATCTCGAT +
Preference number: 3 (lower is better)
Translates to: CTPTRQSWASAL*KGLTGNHSYLD
Trigger: ATCGAGATAGCTGTGATTGCCTGTCAGGCCCTTGCAAAGGGCTGAGGCCCAGCTCTGTCTGGTGGGTGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR GCA 72 bp CCCACCCCTGCACTTTCTTCCCTAAAGTGGCTCACCTaGTGTCCTGACAACCAGCCTCGGCTGGTTACCACA +
Preference number: 3 (lower is better)
Translates to: PTPALSSLKWLT*CPDNQPRLVTT
Trigger: TGTGGTAACCAGCCGAGGCTGGTTGTCAGGACAGCAGGTGAGCCACTTTAGGGAAGAAAGTGCAGGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR GCA 72 bp TGGCTGGCCTTGGTAATCTGGGCATCCACCCACCCCTaGACTTTCTTCCCTAAAGTGGCTCACCTGCTGTCC +
Preference number: 3 (lower is better)
Translates to: WLALVIWASTHP*TFFPKVAHLLS
Trigger: GGACAGCAGGTGAGCCACTTTAGGGAAGAAAGTGCAGGGGTGGGTGGATGCCCAGATTACCAAGGCCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR CCA 72 bp CCCACGTGTAAACAGTCCACAGTCACACCAGCGCTTTaGGAAACAGAAGCCCACTCTCGGTCTTCCTGGGCC +
Preference number: 3 (lower is better)
Translates to: PTCKQSTVTPAL*ETEAHSRSSWA
Trigger: GGCCCAGGAAGACCGAGAGTGGGCTTCTGTTTCCCAAAGCGCTGGTGTGACTGTGGACTGTTTACACGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR CCA 72 bp CGGCTAGGAACCCCAGGTGTCCACTCTTGCTTGGGATaGCAGGTGATGGAGGCTAAAGATCTCCCTTCGGTG +
Preference number: 3 (lower is better)
Translates to: RLGTPGVHSCLG*QVMEAKDLPSV
Trigger: CACCGAAGGGAGATCTTTAGCCTCCATCACCTGCCATCCCAAGCAAGAGTGGACACCTGGGGTTCCTAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR GCA 72 bp ACCTCAATGCGGCTAGGAACCCCAGGTGTCCACTCTTaGTTGGGATGGCAGGTGATGGAGGCTAAAGATCTC +
Preference number: 3 (lower is better)
Translates to: TSMRLGTPGVHS*LGWQVMEAKDL
Trigger: GAGATCTTTAGCCTCCATCACCTGCCATCCCAAGCAAGAGTGGACACCTGGGGTTCCTAGCCGCATTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR CCA 72 bp TTGCAAGGGCCTGACAGGCAATCACAGCTATCTCGATaGGTTCCAGTTCAGTCAGTGCCCCACCCCTTGCTT +
Preference number: 3 (lower is better)
Translates to: LQGPDRQSQLSR*VPVQSVPHPLL
Trigger: AAGCAAGGGGTGGGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCCTTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR CAA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCCTCCCACCTCTGCCCTaGGCCAATGCAAAGGGCTTC +
Preference number: 3 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLLPPLP*ANAKGF
Trigger: GAAGCCCTTTGCATTGGCCAAGGGCAGAGGTGGGAG...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR GCA 72 bp GGAAACAGAAGCCCACTCTCGGTCTTCCTGGGCCACTaGTTCTCATCGTTGGTCTTTGGGGATCAAAGACTC +
Preference number: 3 (lower is better)
Translates to: GNRSPLSVFLGH*FSSLVFGDQRL
Trigger: GAGTCTTTGATCCCCAAAGACCAACGATGAGAAGCAGTGGCCCAGGAAGACCGAGAGTGGGCTTCTGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR GCA 72 bp TCATGGCTCCTTGGGCCCAGTCCCCAAAATCAGGGCTaGACAGGTCTGAATAGCAAAGCCAGGCTTAACCTT +
Preference number: 3 (lower is better)
Translates to: SWLLGPSPQNQG*TGLNSKARLNL
Trigger: AAGGTTAAGCCTGGCTTTGCTATTCAGACCTGTGCAGCCCTGATTTTGGGGACTGGGCCCAAGGAGCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR CCA 72 bp GGTCTTCCTGGGCCACTGCTTCTCATCGTTGGTCTTTaGGGATCAAAGACTCCTCTGTGTCTGAGTCAGGTC +
Preference number: 3 (lower is better)
Translates to: GLPGPLLLIVGL*GSKTPLCLSQV
Trigger: GACCTGACTCAGACACAGAGGAGTCTTTGATCCCCAAAGACCAACGATGAGAAGCAGTGGCCCAGGAAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR CCA 72 bp AGTCCTTCCTTCTTACTGAGGCAGCCCACCTTGACCTaGTCCCAGGAATTTGGCCCACCAGTACCTGAAGAT +
Preference number: 3 (lower is better)
Translates to: SPSFLLRQPTLT*SQEFGPPVPED
Trigger: ATCTTCAGGTACTGGTGGGCCAAATTCCTGGGACCAGGTCAAGGTGGGCTGCCTCAGTAAGAAGGAAGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR CAA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTCACTGCTTCTCATCGTaGGTCTTTGGGGATCAAAGA +
Preference number: 3 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACHCFSS*VFGDQR
Trigger: TCTTTGATCCCCAAAGACCAACGATGAGAAGCAGTG...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR CAA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCTCAGTGCCCCACCCCTaGCTTTCAGAACCTGCTCAG +
Preference number: 3 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLSVPHP*LSEPAQ
Trigger: CTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGA...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR GCA 72 bp AATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTaGCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGG +
Preference number: 3 (lower is better)
Translates to: NHSYLDGFQFSQ*PTPCFQNLLSR
Trigger: CCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR CCA 72 bp ACAAACACAGCCACGGAGCTGGAGGCCAGTCCAAACTaGCCTGTTTATCTTCCAAGTCAAGTGAGACTCAGC +
Preference number: 3 (lower is better)
Translates to: TNTATELEASPN*PVYLPSQVRLS
Trigger: GCTGAGTCTCACTTGACTTGGAAGATAAACAGGCCAGTTTGGACTGGCCTCCAGCTCCGTGGCTGTGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR CAA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCCAGGCTGGAGTGCAATaGTGCAATCTCGGCTCACTG +
Preference number: 3 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLQAGVQ*CNLGSL
Trigger: CAGTGAGCCGAGATTGCACAATTGCACTCCAGCCTG...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR CCA 72 bp AGTGGCTCACCTGCTGTCCTGACAACCAGCCTCGGCTaGTTACCACAAATAATAAAGGTCCAACATCTTCCC +
Preference number: 3 (lower is better)
Translates to: SGSPAVLTTSLG*LPQIIKVQHLP
Trigger: GGGAAGATGTTGGACCTTTATTATTTGTGGTAACCAGCCGAGGCTGGTTGTCAGGACAGCAGGTGAGCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR GCA 72 bp GTTTATCTTCCAAGTCAAGTGAGACTCAGCCTTCCCTaGCCACCCCAGAGCAATATACAGCTGAGAGTCTAC +
Preference number: 3 (lower is better)
Translates to: VYLPSQVRLSLP*PPQSNIQLRVY
Trigger: GTAGACTCTCAGCTGTATATTGCTCTGGGGTGGGCAGGGAAGGCTGAGTCTCACTTGACTTGGAAGATAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR CAA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAATCTCATCGTTGGTCTTaGGGGATCAAAGACTCCTCT +
Preference number: 3 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQSHRWS*GIKDSS
Trigger: AGAGGAGTCTTTGATCCCCAAAGACCAACGATGAGA...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR CAA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTAGTCACACCAGCGCTTaGGGAAACAGAAGCCCACTC +
Preference number: 3 (lower is better)
Translates to: EFGPPVPEDREARPRNIVSHTSA*GNRSPL
Trigger: GAGTGGGCTTCTGTTTCCCAAAGCGCTGGTGTGACT...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR GCA 72 bp GGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTaGCCAGGCAAAGGACACGTGGTCACCCTACTGATA +
Preference number: 3 (lower is better)
Translates to: GLIHWKTSINLD*PGKGHVVTLLI
Trigger: TATCAGTAGGGTGACCACGTGTCCTTTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR CAA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAATTTCCCATCCTAAACTaGCCAAGTGTCCTCTCTCTA +
Preference number: 3 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQFPILN*PSVLSL
Trigger: TAGAGAGAGGACACTTGGCAAGTTTAGGATGGGAAA...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR-3UTR CAA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCAAGCCAGGCTTAACCTaGTTTCCCATCCTAAACTTG +
Preference number: 3 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLKPGLT*FPILNL
Trigger: CAAGTTTAGGATGGGAAACAAGGTTAAGCCTGGCTT...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR TCA 72 bp AGACTATTAGCTTGCCATGAACAGGAGTCATGTGGGTaGGCTGATGGCAGTCTATCCATACTAAGCACAGTG +
Preference number: 3 (lower is better)
Translates to: RLLACHEQESCG*ADGSLSILSTV
Trigger: CACTGTGCTTAGTATGGATAGACTGCCATCAGCTCACCCACATGACTCCTGTTCATGGCAAGCTAATAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR CCA 72 bp TTAGTATTTTACCGACTGGTAGAGGTGTGTCAACTCTaGGCCCACACTGCTATGAATCTGGGTATGTGTGCT +
Preference number: 3 (lower is better)
Translates to: LVFYRLVEVCQL*AHTAMNLGMCA
Trigger: AGCACACATACCCAGATTCATAGCAGTGTGGGCCCAGAGTTGACACACCTCTACCAGTCGGTAAAATACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356542.5
3UTR-3UTR CAA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCAAGGCATCAAGAGTATaGGTGACTTGTAGTATCAGT +
Preference number: 3 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLKASRV*VTCSIS
Trigger: ACTGATACTACAAGTCACCAATACTCTTGATGCCTT...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR TCA 72 bp AGGCTTTCTAGCATCTTAAGGCATCAAGAGTATTGGTaGCTTGTAGTATCAGTGTTAGGAAAAATGCCTTCT +
Preference number: 3 (lower is better)
Translates to: RLSSILRHQEYW*LVVSVLGKMPS
Trigger: AGAAGGCATTTTTCCTAACACTGATACTACAAGTCACCAATACTCTTGATGCCTTAAGATGCTAGAAAGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCCTGCCGGGCGCTTTGTaGTTGGCCTCCGCGGCGCCC +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPLPGAL*LASAAP
Trigger: GGGCGCCGCGGAGGCCAAGCACAAAGCGCCCGGCAG...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCTCAGGCTGCGGCCGGTaGCACCGTGGGGTAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPSGCGR*HRGVAL
Trigger: CAGGGCTACCCCACGGTGGCACCGGCCGCAGCCTGA...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTCCGGGGCCTCCTGGGTaGAGATCCAGGGCGGATTGG +
Preference number: 4 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACPGPPG*RSRADW
Trigger: CCAATCCGCCCTGGATCTTCACCCAGGAGGCCCCGG...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCGGGAGGAGAAGGACTTaGGCAGCGGGTGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPGRRRT*AAGGPG
Trigger: CCCAGGGCCACCCGCTGCCCAAGTCCTTCTCCTCCC...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCAGACCTGCCGGCAGCTaGGGCGAAGCCGTAGTCGGC +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPRPAGS*GEAVVG
Trigger: GCCGACTACGGCTTCGCCCCAGCTGCCGGCAGGTCT...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCCTGGTGCTGTGGCCTTaGGCTCCCCAGGGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPLVLWP*APQGSL
Trigger: CAGACTGCCCTGGGGAGCTCAAGGCCACAGCACCAG...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTTGGGAAGGCTGCAGATaGGCGGGCTCCCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACWEGCR*AGSLCG
Trigger: CCCACACAGGGAGCCCGCTCATCTGCAGCCTTCCCA...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCTCCTCCGGGGCCTCCTaGGTGAAGATCCAGGGCGGA +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPSSGAS*VKIQGG
Trigger: TCCGCCCTGGATCTTCACCCAGGAGGCCCCGGAGGA...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCCAGGGGCCGGACTCTTaGCCGAGCTTTCAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPQGPDS*PSFQRG
Trigger: GCCACGCTGAAAGCTCGGCCAAGAGTCCGGCCCCTG...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCGGCGGATGTGGAAGCTaGGAGGCAGTGGGAGTCGGC +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPGGCGS*EAVGVG
Trigger: GCCGACTCCCACTGCCTCCCAGCTTCCACATCCGCC...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCGGACTGGCCAAGCCTTaGGCTGGCTGGTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPGLAKP*AGWCCG
Trigger: GCCACAGCACCAGCCAGCCCAAGGCTTGGCCAGTCC...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCCCCTGGCTCAGGAGGTaGCTTTCCGATGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPPWLRR*LSDGPL
Trigger: CAGGGGCCCATCGGAAAGCCACCTCCTGAGCCAGGG...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCGGATGGACGAAGTCCTaGCTGGGGTTGGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPGWTKS*LGLGEA
Trigger: TGCCTCCCCCAACCCCAGTCAGGACTTCGTCCATCC...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCGGCCTGGCCTGTGACTaGGGAATCGGTCCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPGLACD*GIGPLS
Trigger: GGAGAGAGGACCGATTCCTCAGTCACAGGCCAGGCC...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTTTGCCCTCCTTGCTCTaGGGGGCCACTGTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACLPSLL*GATVGP
Trigger: AGGCCCAACAGTGGCCCCTCAGAGCAAGGAGGGCAA...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCGCTCAGGGTCATTGCTaGACTCTGGCGGCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPAQGHC*TLAAVG
Trigger: TCCCACCGCCGCCAGAGTTCAGCAATGACCCTGAGC...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAAGCACCGGGCAACAGGTaGTGCGGGCGCCGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQAPGNR*CGRRRL
Trigger: CAAGCGGCGGCGCCCGCAGCACCTGTTGCCCGGTGC...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTTCCAGGGCGGATTGGTaGCGTAGAGGGAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACSRADW*RRGRCW
Trigger: CCAGCACCTCCCTCTACGCCACCAATCCGCCCTGGA...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTGGGTGCTGTGGAAGGTaGAGATGGCAGTGGCGACCC +
Preference number: 4 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACGCCGR*RWQWRP
Trigger: GGGTCGCCACTGCCATCTCCACCTTCCACAGCACCC...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTCTCCAATACTGGGGGTaGAGGTGGGGCCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACLQYWG*RWGHAG
Trigger: CCCAGCATGGCCCCACCTCCACCCCCAGTATTGGAG...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCCGGGGGAAGGTGAGATaGGGCTCTGGGTTAGGTCCC +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPRGKVR*GSGLGP
Trigger: GGGACCTAACCCAGAGCCCCATCTCACCTTCCCCCG...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTGGCCCTGGGGGAGGTTaGAGGGAGCTACTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACGPGGG*RELLFP
Trigger: GGGAAAGAGTAGCTCCCTCCAACCTCCCCCAGGGCC...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR CAA 72 bp CTGCACACCCACCAGACAGAGCTGGGCCTCAGCCCTTaGCAAGGGCCTGACAGGCAATCACAGCTATCTCGA +
Preference number: 4 (lower is better)
Translates to: LHTHQTELGLSP*QGPDRQSQLSR
Trigger: TCGAGATAGCTGTGATTGCCTGTCAGGCCCTTGCAAAGGGCTGAGGCCCAGCTCTGTCTGGTGGGTGTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCACTTGGGCACCACAGTaGAGGAGTTGGGCGTGCCCT +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPTWAPQ*RSWACP
Trigger: AGGGCACGCCCAACTCCTTCACTGTGGTGCCCAAGT...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp CGACTGGTAGAGGTGTGTCAACTCTGGGCCCACACTGCTATGAATCTGGGTATGTCCCTCGCCCTGCCCTaGCCCGGACTGAACTCAGCA +
Preference number: 4 (lower is better)
Translates to: RLVEVCQLWAHTAMNLGMSLALP*PGLNSA
Trigger: TGCTGAGTTCAGTCCGGGGCAGGGCAGGGCGAGGGA...CATACCCAGATTCATAGCAGTGTGGGCCCAGAGTTGACACACCTCTACCAGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS-3UTR GCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCCCTGGCTGTGGAAGATaGTGTCAGAGCTGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPPGCGR*CQSWPR
Trigger: CCGAGGCCAGCTCTGACAGCATCTTCCACAGCCAGG...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCAGCCCTGGGCCTCGGTaGGGCTCCCCGACGTACAGG +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLSPGPR*GSPTYR
Trigger: CCTGTACGTCGGGGAGCCGCACCGAGGCCCAGGGCT...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCTGGGAGAGCTCAGGCTaGGGCCGGTGCCACCGTGGG +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLWESSG*GRCHRG
Trigger: CCCACGGTGGCACCGGCCGCAGCCTGAGCTCTCCCA...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCTCGGGGCCTCCGGGCTaGGGCCCGAAGCAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLSGPPG*GPKQLG
Trigger: TCCCAACTGCTTCGGGCCGCAGCCCGGAGGCCCCGA...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTGGCTGGGAGCCTTCTTaGTGGCCCCCTCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACGWEPS*WPPLPF
Trigger: GAAAGGAAGAGGGGGCCACCAAGAAGGCTCCCAGCC...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCCTCGGGGGCCCTGTCTaGGTAGACCTGGGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLLGGPV*VDLGGG
Trigger: CCCGCCTCCCAGGTCTACCCAGACAGGGCCCCCGAG...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCCTCCCCAGGGCAGTCTaGCTCGGGGGCCCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLLPRAV*LGGPVW
Trigger: CCAGACAGGGCCCCCGAGCCAGACTGCCCTGGGGAG...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTAAGCCTTGGGCTGGCTaGTGCTGTGGCCTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACKPWAG*CCGLEL
Trigger: GAGCTCAAGGCCACAGCACCAGCCAGCCCAAGGCTT...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTGAACTACTTTCTGGCTaGCCCCCACCAGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACELLSG*PPPACS
Trigger: GGAGCAGGCTGGTGGGGGCCAGCCAGAAAGTAGTTC...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCTGCCCTGCCCCGGACTaGACTCAGCACGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLCPAPD*TQHGLP
Trigger: GGGGAGACCGTGCTGAGTTCAGTCCGGGGCAGGGCA...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCGAGCTGCCTCAAGTCTaGGTAGTTGTTCCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPELPQV*VVVPGR
Trigger: CCTCCCCGGAACAACTACTCAGACTTGAGGCAGCTC...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTTTTCCGATGGGCCCCTaGGCAGACATAGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACFPMGP*ADIGDG
Trigger: CCCATCTCCTATGTCTGCTCAGGGGCCCATCGGAAA...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp TTTAGTATTTTACCGACTGGTAGAGGTGTGTCAACTCTGGGCCCACACTGCTATGCACCGGGCAACAGGTaGTGCGGGCGCCGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: FSILPTGRGVSTLGPHCYAPGNR*CGRRRL
Trigger: CAAGCGGCGGCGCCCGCAGCACCTGTTGCCCGGTGC...ATAGCAGTGTGGGCCCAGAGTTGACACACCTCTACCAGTCGGTAAAATACTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS-3UTR GCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCGCCACAGAGATAGGCTaGCAGCTCGTTCCGCAGCTT +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPATEIG*QLVPQL
Trigger: AAGCTGCGGAACGAGCTGGCAGCCTATCTCTGTGGC...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTCCTTCTTGCCCTCCTTaGTCTGAGGGGCCACTGTTG +
Preference number: 4 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACPSCPP*SEGPLL
Trigger: CAACAGTGGCCCCTCAGAGCAAGGAGGGCAAGAAGG...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAAGGCGGGGGCCCTTCTTaGCCTCCTTGCTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQGGGPS*PPCSEG
Trigger: CCCCTCAGAGCAAGGAGGGCAAGAAGGGCCCCCGCC...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTTCCCCAGTCACCGGGTaGCTGAGGAGTTCATCAGTG +
Preference number: 4 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACSPVTG*LRSSSV
Trigger: CACTGATGAACTCCTCAGGCACCCGGTGACTGGGGA...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTAAGATCTCCCTTCGGTaGCCTGCACACCCACCAGAC +
Preference number: 4 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACKISLR*PAHPPD
Trigger: GTCTGGTGGGTGTGCAGGGCACCGAAGGGAGATCTT...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp CGACTGGTAGAGGTGTGTCAACTCTGGGCCCACACTGCTATGAATCTGGGTATGTCCAGGGCGGATTGGTaGCGTAGAGGGAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RLVEVCQLWAHTAMNLGMSRADW*RRGRCW
Trigger: CCAGCACCTCCCTCTACGCCACCAATCCGCCCTGGA...CATACCCAGATTCATAGCAGTGTGGGCCCAGAGTTGACACACCTCTACCAGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS-3UTR CCA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTGCCGAGCTTTCAGCGTaGCTGTTCCTGACTCGCTCA +
Preference number: 4 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACAELSA*LFLTRS
Trigger: TGAGCGAGTCAGGAACAGCCACGCTGAAAGCTCGGC...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp ACTGGTAGAGGTGTGTCAACTCTGGGCCCACACTGCTATGAATCTGGGTATGTGCAGGGGCCGGACTCTTaGCCGAGCTTTCAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: TGRGVSTLGPHCYESGYVQGPDS*PSFQRG
Trigger: GCCACGCTGAAAGCTCGGCCAAGAGTCCGGCCCCTG...CACATACCCAGATTCATAGCAGTGTGGGCCCAGAGTTGACACACCTCTACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS-3UTR CCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCGGCACAGCCAGCCCATaGTTTTCCTGGGCATTCAGC +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPGTASP*FSWAFS
Trigger: GCTGAATGCCCAGGAAAACCATGGGCTGGCTGTGCC...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCGGGAGTGTCCTTTGCTaGCAGGCTCAGGAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPGSVLC*QAQESL
Trigger: GAGACTCTCCTGAGCCTGCCAGCAAAGGACACTCCC...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCAGATGCTGTCAGAGCTaGCCTCGGCTTGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPRCCQS*PRLGGC
Trigger: ACAGCCACCAAGCCGAGGCCAGCTCTGACAGCATCT...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCAAGGGAACTACTTTCTaGCTGGCCCCCACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPKGTTF*LAPTSL
Trigger: CAGGCTGGTGGGGGCCAGCCAGAAAGTAGTTCCCTT...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCCCCTTTGCAAGGGCCTaGCAGGCAATCACAGCTATC +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPPFARA*QAITAI
Trigger: GATAGCTGTGATTGCCTGTCAGGCCCTTGCAAAGGG...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTAGAGCAATATACAGCTaGGAGTCTACGCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACRAIYS*ESTPHP
Trigger: GGGGTGGGGCGTAGACTCTCAGCTGTATATTGCTCT...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCGCTTCTTTTTCATGCTaGCGCAGCCCGCGCGGGCGC +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLASFSC*RSPRGR
Trigger: GCGCCCGCGCGGGCTGCGGCAGCATGAAAAAGAAGC...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTTCGGGGAGCCTCTTGTaGTTCCTGAACTGGGATGGA +
Preference number: 4 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACSGSLL*FLNWDG
Trigger: TCCATCCCAGTTCAGGAAGCACAAGAGGCTCCCCGA...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCAGCCGTAGTCGGCGCTaGCGGGCGCTTTGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLSRSRR*RALCAW
Trigger: CCAAGCACAAAGCGCCCGGCAGCGCCGACTACGGCT...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCCAGTGCCCCACCCCTTaGTTTCAGAACCTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPQCPTP*FQNLLS
Trigger: ACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTG...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTCATGCTGGGCGGGGGTaGGGGTTCCAGCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASHAGRG*GFQQQG
Trigger: CCCCTGCTGCTGGAACCCCCACCCCCGCCCAGCATG...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCGCAGTGGGAGTCGGCTaGGAGCCTTCTTGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLAVGVG*EPSWWP
Trigger: GGGCCACCAAGAAGGCTCCCAGCCGACTCCCACTGC...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCGGTGGTGGATTGAGGTaGCAGATTCTTGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPGGGLR*QILGHR
Trigger: CCTGTGGCCAAGAATCTGCCACCTCAATCCACCACC...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTCTTGGGTGGTATGGCTaGTCCCAACATAGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACLGWYG*SQHSLG
Trigger: CCCAAGGCTATGTTGGGACCAGCCATACCACCCAAG...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCGAACTCTGGCGGCGGTaGGATGACCTCGAAGTTGAA +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPELWRR*DDLEVE
Trigger: TTCAACTTCGAGGTCATCCCACCGCCGCCAGAGTTC...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCCTTCCATTCCACATGTaGGAGCTTCACTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPLPFHM*ELHSPP
Trigger: GGGTGGGGAGTGAAGCTCCCACATGTGGAATGGAAG...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR CAA 72 bp CTCTCCAGTCCTTCCTTCTTACTGAGGCAGCCCACCTaGACCTGGTCCCAGGAATTTGGCCCACCAGTACCT +
Preference number: 4 (lower is better)
Translates to: LSSPSFLLRQPT*TWSQEFGPPVP
Trigger: AGGTACTGGTGGGCCAAATTCCTGGGACCAGGTCAAGGTGGGCTGCCTCAGTAAGAAGGAAGGACTGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCGCTCACCTGCTGTCCTaGCAACCAGCCTCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLAHLLS*QPASAG
Trigger: ACCAGCCGAGGCTGGTTGTCAGGACAGCAGGTGAGC...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTATCTTCCAAGTCAAGTaGGACTCAGCCTTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACIFQVK*DSAFPA
Trigger: GGCAGGGAAGGCTGAGTCTCACTTGACTTGGAAGAT...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp ACTGGTAGAGGTGTGTCAACTCTGGGCCCACACTGCTATGAATCTGGGTATGTGTCTGCTTCTTTTTCATaGTGCCGCAGCCCGCGCGGG +
Preference number: 4 (lower is better)
Translates to: TGRGVSTLGPHCYESGYVSASFS*CRSPRG
Trigger: CCCGCGCGGGCTGCGGCAGCATGAAAAAGAAGCAGA...CACATACCCAGATTCATAGCAGTGTGGGCCCAGAGTTGACACACCTCTACCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS-3UTR GCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCTGGCGTAGAGGGAGGTaGTGGGGGTCGTGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLWRRGR*WGSWCA
Trigger: AGCACACCACGACCCCCAGCACCTCCCTCTACGCCA...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCTGTCTCCATAATAGATaGCATCGAAGCCCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPCLHNR*HRSPRS
Trigger: GGACCGGGGGCTTCGATGGCATCTATTATGGAGACA...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCCATTCCCATCTCTGCTaGCTCCACTCTCCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPHSHLC*LHSPRL
Trigger: AAGCCTTGGAGAGTGGAGGCAGCAGAGATGGGAATG...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTAGACTCAGCCTTCCCTaGCCACCCCAGAGCAATATA +
Preference number: 4 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACRLSLP*PPQSNI
Trigger: TATATTGCTCTGGGGTGGGCAGGGAAGGCTGAGTCT...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTTACTGGGGGTGGAGGTaGGGCCATGCTGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: EFGPPVPEDREARPRNIVYWGWR*GHAGRG
Trigger: CCCCCGCCCAGCATGGCCCCACCTCCACCCCCAGTA...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCGGTGAGATGGGGCTCTaGGTTAGGTCCCAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLGEMGL*VRSQGA
Trigger: AGCGCCCTGGGACCTAACCCAGAGCCCCATCTCACC...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCGCTTGGGACTGGGACTaGCCAAGCCTTGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLAWDWD*PSLGLA
Trigger: AGCCAGCCCAAGGCTTGGCCAGTCCCAGTCCCAAGC...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCCTGAGGGGCCACTGTTaGGCCTGGCCTGTGACTGAG +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLLRGHC*AWPVTE
Trigger: CTCAGTCACAGGCCAGGCCCAACAGTGGCCCCTCAG...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCGAGGTGGCAGATTCTTaGCCACAGGCTTGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPEVADS*PQAWRV
Trigger: AACTCTCCAAGCCTGTGGCCAAGAATCTGCCACCTC...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTTCTGAGCCCTCTGCCTaGCCGCCAGGAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASSEPSA*PPGAGP
Trigger: TGGCCCTGCTCCTGGCGGCCAGGCAGAGGGCTCAGA...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCGAGCTGGCCTCGGCTTaGTGGCTGTGGTCACGGAGA +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLELASA*WLWSRR
Trigger: TCTCCGTGACCACAGCCACCAAGCCGAGGCCAGCTC...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTGGCAGCGGGTGGCCCTaGGGGAGGTTGGAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: EFGPPVPEDREARPRNIVGSGWP*GRLEGA
Trigger: AGCTCCCTCCAACCTCCCCCAGGGCCACCCGCTGCC...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTGCGGCCCGAAGCAGTTaGGAGAGCTCAGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASAARSS*ESSGCG
Trigger: GCCGCAGCCTGAGCTCTCCCAACTGCTTCGGGCCGC...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTAGACTCATGGCTCCTTaGGCCCAGTCCCCAAAATCA +
Preference number: 4 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACRLMAP*AQSPKS
Trigger: TGATTTTGGGGACTGGGCCCAAGGAGCCATGAGTCT...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp CAGATGAATGTTTTAGTATTTTACCGACTGGTAGAGGTGTGTCAACTCTGGGCCTGCCCTGCCCCGGACTaGACTCAGCACGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: QMNVLVFYRLVEVCQLWACPAPD*TQHGLP
Trigger: GGGGAGACCGTGCTGAGTTCAGTCCGGGGCAGGGCA...GGCCCAGAGTTGACACACCTCTACCAGTCGGTAAAATACTAAAACATTCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS-3UTR TCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCGTTGGGCCTGGCCTGTaGCTGAGGAATCGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLVGPGL*LRNRSS
Trigger: AGAGGACCGATTCCTCAGTCACAGGCCAGGCCCAAC...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp CGACTGGTAGAGGTGTGTCAACTCTGGGCCCACACTGCTATGAATCTGGGTATGGGTTTGTGGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: RLVEVCQLWAHTAMNLGMGLWIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCCACAAACC...CATACCCAGATTCATAGCAGTGTGGGCCCAGAGTTGACACACCTCTACCAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS-3UTR GCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTTCCCTCGCCCTGCCCTaGCCCGGACTGAACTCAGCA +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASSLALP*PGLNSA
Trigger: TGCTGAGTTCAGTCCGGGGCAGGGCAGGGCGAGGGA...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCCCCAGCTCGTTCATCTaGTTGGGACTGGGACTGGCC +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLPSSFI*LGLGLA
Trigger: GGCCAGTCCCAGTCCCAAGCAGATGAACGAGCTGGG...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTTGGTGTAGGGAGACCTaGCGGCAGCTGGGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASWCRET*RQLGRS
Trigger: GCTTCGCCCCAGCTGCCGGCAGGTCTCCCTACACCA...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTGTCTTCCTGGGCCACTaGTTCTCATCGTTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACVFLGH*FSSLVF
Trigger: AAAGACCAACGATGAGAAGCAGTGGCCCAGGAAGAC...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTCTTGCTTTCAGAACCTaGTCAGTAGGCCGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACLAFRT*SVGRAC
Trigger: ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAG...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTCAGCAGCAGGGGAGGTaGTGGGGGTGCTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASQQQGR*WGCCGR
Trigger: CCTTCCACAGCACCCCCACCACCTCCCCTGCTGCTG...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTCAGGGCGCTCCCCTTTaGCTCAGCAGGGCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASQGAPL*LSRASR
Trigger: CCGAGAAGCCCTGCTGAGCCAAAGGGGAGCGCCCTG...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCTGGGAGCCTTCTTGGTaGCCCCCTCTTCCTTTCGGG +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLWEPSW*PPLPFG
Trigger: CCCGAAAGGAAGAGGGGGCCACCAAGAAGGCTCCCA...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTCTGCAGCCCCTCCTCTaGCCAGGGTGGGCATCACCA +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASLQPLL*PGWASP
Trigger: TGGTGATGCCCACCCTGGCCAGAGGAGGGGCTGCAG...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAACTGGCCTCGGCTTGGTaGCTGTGGTCACGGAGACTT +
Preference number: 4 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQLASAW*LWSRRL
Trigger: AAGTCTCCGTGACCACAGCCACCAAGCCGAGGCCAG...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTCGGGGAGGGGAGCTCTaGCGGCCCAGATACTGGAGG +
Preference number: 4 (lower is better)
Translates to: EFGPPVPEDREARPRNIVRGGEL*RPRYWR
Trigger: CCTCCAGTATCTGGGCCGCCAGAGCTCCCCTCCCCG...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAATTCCATAGCGGGTGGTaGTGTAGGGAGACCTGCCGG +
Preference number: 4 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQFHSGW*CRETCR
Trigger: CCGGCAGGTCTCCCTACACCACCACCCGCTATGGAA...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCAGCAGACATAGGAGATaGGATGGCGGGTCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLSRHRR*DGGSQA
Trigger: GGCCTGGGACCCGCCATCCCATCTCCTATGTCTGCT...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTCACTCTTGCTTGGGATaGCAGGTGATGGAGGCTAAA +
Preference number: 4 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACHSCLG*QVMEAK
Trigger: TTTAGCCTCCATCACCTGCCATCCCAAGCAAGAGTG...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAACTGGCCTTGGTAATCTaGGCATCCACCCACCCCTGC +
Preference number: 4 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQLALVI*ASTHPC
Trigger: GCAGGGGTGGGTGGATGCCCAGATTACCAAGGCCAG...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR CAA 72 bp CGGTCTTCCTGGGCCACTGCTTCTCATCGTTGGTCTTaGGGGATCAAAGACTCCTCTGTGTCTGAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: RSSWATASHRWS*GIKDSSVSESG
Trigger: ACCTGACTCAGACACAGAGGAGTCTTTGATCCCCAAAGACCAACGATGAGAAGCAGTGGCCCAGGAAGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAATCCCGAAGAGTTTGCTaGAGGTGCCCTGCACCGTCT +
Preference number: 4 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQSRRVC*RCPAPS
Trigger: AGACGGTGCAGGGCACCTTCAGCAAACTCTTCGGGA...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp CGACTGGTAGAGGTGTGTCAACTCTGGGCCCACACTGCTATGAATCTGGGTATGCAGCGTGGCTGTTCCTaGCTCGCTCACTGTGTTAAA +
Preference number: 4 (lower is better)
Translates to: RLVEVCQLWAHTAMNLGMQRGCS*LAHCVK
Trigger: TTTAACACAGTGAGCGAGTCAGGAACAGCCACGCTG...CATACCCAGATTCATAGCAGTGTGGGCCCAGAGTTGACACACCTCTACCAGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS-3UTR TCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAACCAGTCCACAGGTGCTaGAGACGCTGTGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQPVHRC*RRCVLW
Trigger: CCAGAGAACACAGCGTCTTCAGCACCTGTGGACTGG...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAAAGCAGGGTGGTGGATTaGGGTGGCAGATTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQSRVVD*GGRFLA
Trigger: GGCCAAGAATCTGCCACCTCAATCCACCACCCTGCT...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTCAGCAACCTCACGGCTaGGGCTGCTCTGGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASQQPHG*GCSGGS
Trigger: ACTGCCACCAGAGCAGCCTCAGCCGTGAGGTTGCTG...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTACAGGCGCTTCTTTATaGGCGAGCGGCCCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: EFGPPVPEDREARPRNIVTGASL*ASGPLP
Trigger: CGGGAGGGGGCCGCTCGCTCATAAAGAAGCGCCTGT...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp CGACTGGTAGAGGTGTGTCAACTCTGGGCCCACACTGCTATGAATCTGGGTATGTGTCTCCATAATAGATaGCATCGAAGCCCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: RLVEVCQLWAHTAMNLGMCLHNR*HRSPRS
Trigger: GGACCGGGGGCTTCGATGGCATCTATTATGGAGACA...CATACCCAGATTCATAGCAGTGTGGGCCCAGAGTTGACACACCTCTACCAGTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS-3UTR GCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTGGCTCTGGTGGCCTCTaGCTGCCTGCCATTCAGTGC +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASGSGGL*LPAIQC
Trigger: GCACTGAATGGCAGGCAGGCAGAGGCCACCAGAGCC...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAATGGGGGAGTGTCCTTTaGTGGCAGGCTCAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQWGSVL*WQAQES
Trigger: ACTCTCCTGAGCCTGCCAGCAAAGGACACTCCCCCA...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAATGGGCCTCAGCCCTTTaGAAGGGCCTGACAGGCAAT +
Preference number: 4 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQWASAL*KGLTGN
Trigger: ATTGCCTGTCAGGCCCTTGCAAAGGGCTGAGGCCCA...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp TTTAGTATTTTACCGACTGGTAGAGGTGTGTCAACTCTGGGCCCACACTGCTATCCAGGAGGTGGAGGTTaGAGGGAGCCGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: FSILPTGRGVSTLGPHCYPGGGG*REPRSR
Trigger: GCGTGATCTCGGCTCCCTGCAACCTCCACCTCCTGG...ATAGCAGTGTGGGCCCAGAGTTGACACACCTCTACCAGTCGGTAAAATACTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS-3UTR CCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAAGCTTTTCCATCTGGCTaGGGTCCCTCCAGTCCACAG +
Preference number: 4 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQAFPSG*GPSSPQ
Trigger: CTGTGGACTGGAGGGACCCCAGCCAGATGGAAAAGC...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCGGATCTGCCGCACACTaGGAGTTGGAGAGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLGSAAH*ELESLG
Trigger: CCCAAGACTCTCCAACTCCCAGTGTGCGGCAGATCC...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCGAGTTGGGCGTGCCCTaGCTGTGGAAGATGCTGTCA +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLELGVP*LWKMLS
Trigger: TGACAGCATCTTCCACAGCCAGGGCACGCCCAACTC...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAAGTCATTGCTGAACTCTaGCGGCGGTGGGATGACCTC +
Preference number: 4 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQVIAEL*RRWDDL
Trigger: GAGGTCATCCCACCGCCGCCAGAGTTCAGCAATGAC...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCTCACAGCTATCTCGATaGGTTCCAGTTCAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPSQLSR*VPVQSV
Trigger: CACTGACTGAACTGGAACCCATCGAGATAGCTGTGA...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCATACATACACATTCCTaGTCCCACCTCAATGCGGCT +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPIHTHS*SHLNAA
Trigger: AGCCGCATTGAGGTGGGACCAGGAATGTGTATGTAT...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTAGCGCCCCGAGTAGCTaGGACTACAGGCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: EFGPPVPEDREARPRNIVSAPSS*DYRRPP
Trigger: TGGTGGGCGCCTGTAGTCCCAGCTACTCGGGGCGCT...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCGAGGCCAGTCCAAACTaGCCTGTTTATCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPEASPN*PVYLPS
Trigger: ACTTGGAAGATAAACAGGCCAGTTTGGACTGGCCTC...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCGTCGGAGGTTGCCATTaGCTAGTGAGCTGGTACCTG +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLVGGCH*LVSWYL
Trigger: CAGGTACCAGCTCACTAGTCAATGGCAACCTCCGAC...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTCGAGTCCCCACTGTGTaGGGAGATGCTGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: EFGPPVPEDREARPRNIVRVPTV*GDAGAG
Trigger: CCCAGCTCCAGCATCTCCTCACACAGTGGGGACTCG...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTATTCAGTGCTACATCTaGTTTCCACTTGGTGACACC +
Preference number: 4 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACIQCYI*FPLGDT
Trigger: GGTGTCACCAAGTGGAAATCAGATGTAGCACTGAAT...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCGCTTGGGATGGCAGGTaGTGGAGGCTAAAGATCTCC +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLAWDGR*WRLKIS
Trigger: GGAGATCTTTAGCCTCCATCACCTGCCATCCCAAGC...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAACTGGTCTCGAACTTCTaGCCTCAAGTGATCCACCGG +
Preference number: 4 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQLVSNF*PQVIHR
Trigger: CCGGTGGATCACTTGAGGTCAGAAGTTCGAGACCAG...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCCAGGAGTCATGTGGGTaGGCTGATGGCAGTCTATCC +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLQESCG*ADGSLS
Trigger: GGATAGACTGCCATCAGCTCACCCACATGACTCCTG...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp ACTGGTAGAGGTGTGTCAACTCTGGGCCCACACTGCTATGAATCTGGGTATGTGCCTGGGCAACAAGAATaGAACTCAGTCAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: TGRGVSTLGPHCYESGYVPGQQE*NSVSGR
Trigger: CCTTCCGCTGACTGAGTTTCATTCTTGTTGCCCAGG...CACATACCCAGATTCATAGCAGTGTGGGCCCAGAGTTGACACACCTCTACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS-3UTR GCA 90 bp AATGTTTTAGTATTTTACCGACTGGTAGAGGTGTGTCAACTCTGGGCCCACACTTGGCGTAGAGGGAGGTaGTGGGGGTCGTGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: NVLVFYRLVEVCQLWAHTWRRGR*WGSWCA
Trigger: AGCACACCACGACCCCCAGCACCTCCCTCTACGCCA...AGTGTGGGCCCAGAGTTGACACACCTCTACCAGTCGGTAAAATACTAAAACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS-3UTR GCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTGGACCCCTCTCCCCTTaGCTGGGAGGGAGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: EFGPPVPEDREARPRNIVGPLSP*LGGSGN
Trigger: GTTTCCACTCCCTCCCAGGCAAGGGGAGAGGGGTCC...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAAAGGGGTGGGTATGGATaGGGAGGAAAGAGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQRGGYG*GGKSVW
Trigger: CCACACACTCTTTCCTCCCCATCCATACCCACCCCT...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCATCGGTCCTCTCTCCTaGAGCCACAGAGATAGGCTG +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLIGPLS*SHRDRL
Trigger: CAGCCTATCTCTGTGGCTCCAGGAGAGAGGACCGAT...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTGGCCACTGTTGGGCCTaGCCTGTGACTGAGGAATCG +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASGHCWA*PVTEES
Trigger: CGATTCCTCAGTCACAGGCCAGGCCCAACAGTGGCC...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAATCAGTTGGGATGTGGTaGTGGGCAGAGTTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQSVGMW*WAELWL
Trigger: CAGCCACAACTCTGCCCACCACCACATCCCAACTGA...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCCCATCAGTTGGGATGTaGTGGTGGGCAGAGTTGTGG +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLPSVGM*WWAELW
Trigger: CCACAACTCTGCCCACCACCACATCCCAACTGATGG...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTCTCCTCTGGCCAGGGTaGGCATCACCACAGCAACCT +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASLLWPG*ASPQQP
Trigger: AGGTTGCTGTGGTGATGCCCACCCTGGCCAGAGGAG...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTAGTTCATCAGTGGGCTaGGCCGAGGCAGGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASSSSVG*AEAGGL
Trigger: CAAGCCTCCTGCCTCGGCCCAGCCCACTGATGAACT...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCCACTCTCGGTCTTCCTaGGCCACTGCTTCTCATCGT +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLHSRSS*ATASHR
Trigger: ACGATGAGAAGCAGTGGCCCAGGAAGACCGAGAGTG...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTCCCACCAGACAGAGCTaGGCCTCAGCCCTTTGCAAG +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASPTRQS*ASALCK
Trigger: CTTGCAAAGGGCTGAGGCCCAGCTCTGTCTGGTGGG...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTACACAGCCACGGAGCTaGAGGCCAGTCCAAACTGGC +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASTQPRS*RPVQTG
Trigger: GCCAGTTTGGACTGGCCTCCAGCTCCGTGGCTGTGT...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp CGACTGGTAGAGGTGTGTCAACTCTGGGCCCACACTGCTATGAATCTGGGTATGAAAATTTGCCGGGCATaGTGGTGGGCACCTGTAATC +
Preference number: 4 (lower is better)
Translates to: RLVEVCQLWAHTAMNLGMKICRA*WWAPVI
Trigger: GATTACAGGTGCCCACCACCATGCCCGGCAAATTTT...CATACCCAGATTCATAGCAGTGTGGGCCCAGAGTTGACACACCTCTACCAGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS-3UTR TCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTAGCCTTGGGCTGGAGTaGTGTAGTTGGCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASSLGLE*CSWQQG
Trigger: ACCCTGCTGCCAACTACATCACTCCAGCCCAAGGCT...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTCAGTCACCGGGTGCCTaGGGAGTTCATCAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: EFGPPVPEDREARPRNIVQSPGA*GVHQWA
Trigger: AGCCCACTGATGAACTCCTCAGGCACCCGGTGACTG...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCGGCCATATACAAATGTaGGGTATTCATCACCCAAAG +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPGHIQM*GIHHPK
Trigger: CTTTGGGTGATGAATACCTCACATTTGTATATGGCC...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTTCTGCTTCTTTTTCATaGTGCCGCAGCCCGCGCGGG +
Preference number: 4 (lower is better)
Translates to: EFGPPVPEDREARPRNIVSASFS*CRSPRG
Trigger: CCCGCGCGGGCTGCGGCAGCATGAAAAAGAAGCAGA...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp ACTGGTAGAGGTGTGTCAACTCTGGGCCCACACTGCTATGAATCTGGGTATGTGTTGCTGAAGGTGCCCTaGACCGTCTGCTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: TGRGVSTLGPHCYESGYVLLKVP*TVCFFF
Trigger: GAAAAAGAAGCAGACGGTGCAGGGCACCTTCAGCAA...CACATACCCAGATTCATAGCAGTGTGGGCCCAGAGTTGACACACCTCTACCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS-3UTR GCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTAGCAGGTGGATGGGCTaGCTTCTGAGCACAGGGCAA +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASSRWMG*LLSTGQ
Trigger: TTGCCCTGTGCTCAGAAGGCAGCCCATCCACCTGCT...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCTCTCTGTCAGGCTGCTaGCGCCAAGACTCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLSLSGC*RQDSFQ
Trigger: CTGAAAAGAGTCTTGGCGGCAGCAGCCTGACAGAGA...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCCTGTCTCTGTCAGGCTaGTGCCGCCAAGACTCTTTT +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLLSLSG*CRQDSF
Trigger: AAAAGAGTCTTGGCGGCAGCAGCCTGACAGAGACAG...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCGGAAACTTCTTGAGATaGTGGCTTCTCTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLGNFLR*WLLWLA
Trigger: GGCCAGCCAGAGAAGCCAGCATCTCAAGAAGTTTCC...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAATCTGCCCTTGGCCAATaGAAAGGGCTTCCATTCCAC +
Preference number: 4 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQSALGQ*KGLPFH
Trigger: GTGGAATGGAAGCCCTTTGCATTGGCCAAGGGCAGA...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCCTAAAGTGGCTCACCTaGTGTCCTGACAACCAGCCT +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLLKWLT*CPDNQP
Trigger: AGGCTGGTTGTCAGGACAGCAGGTGAGCCACTTTAG...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAAGCATCCACCCACCCCTaGACTTTCTTCCCTAAAGTG +
Preference number: 4 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQASTHP*TFFPKV
Trigger: CACTTTAGGGAAGAAAGTGCAGGGGTGGGTGGATGC...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTAGATCCAGGGCGGATTaGTGGCGTAGAGGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: EFGPPVPEDREARPRNIVRSRAD*WRRGRC
Trigger: GCACCTCCCTCTACGCCACCAATCCGCCCTGGATCT...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp CAGATGAATGTTTTAGTATTTTACCGACTGGTAGAGGTGTGTCAACTCTGGGCCAGATCCAGGGCGGATTaGTGGCGTAGAGGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: QMNVLVFYRLVEVCQLWARSRAD*WRRGRC
Trigger: GCACCTCCCTCTACGCCACCAATCCGCCCTGGATCT...GGCCCAGAGTTGACACACCTCTACCAGTCGGTAAAATACTAAAACATTCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS-3UTR CCA 90 bp TTTAGTATTTTACCGACTGGTAGAGGTGTGTCAACTCTGGGCCCACACTGCTATGCCGAGCTTTCAGCGTaGCTGTTCCTGACTCGCTCA +
Preference number: 4 (lower is better)
Translates to: FSILPTGRGVSTLGPHCYAELSA*LFLTRS
Trigger: TGAGCGAGTCAGGAACAGCCACGCTGAAAGCTCGGC...ATAGCAGTGTGGGCCCAGAGTTGACACACCTCTACCAGTCGGTAAAATACTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS-3UTR CCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAAAGCCCATGGTTTTCCTaGGCATTCAGCGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQSPWFS*AFSGRK
Trigger: CTTCCTTCCGCTGAATGCCCAGGAAAACCATGGGCT...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCGGGATGAGTAGATCCTaGCCATATTGTCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLGMSRS*PYCPGL
Trigger: GAGGCCTGGACAATATGGCCAGGATCTACTCATCCC...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCAGTCCTGACTGGGGTTaGGGGAGGCACTTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLSPDWG*GRHFER
Trigger: TCTTTCAAAGTGCCTCCCCCAACCCCAGTCAGGACT...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTGCTCGTTCATCTGCTTaGGACTGGGACTGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASARSSA*DWDWPS
Trigger: GCTTGGCCAGTCCCAGTCCCAAGCAGATGAACGAGC...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCCTTTTCAGGAACACCTaGGGGAGTGTCCTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLLFRNT*GSVLCW
Trigger: CCAGCAAAGGACACTCCCCCAGGTGTTCCTGAAAAG...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCTTCTCTGCCATCAGTTaGGATGTGGTGGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLFSAIS*DVVVGR
Trigger: TCTGCCCACCACCACATCCCAACTGATGGCAGAGAA...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTGTCACGGAGACTTCCTaGCAGAGAGGACCGACCCAG +
Preference number: 4 (lower is better)
Translates to: EFGPPVPEDREARPRNIVVTETS*QRGPTQ
Trigger: CTGGGTCGGTCCTCTCTGCCAGGAAGTCTCCGTGAC...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTGGCGTGCCCTGGCTGTaGAAGATGCTGTCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: EFGPPVPEDREARPRNIVGVPWL*KMLSEL
Trigger: CAGCTCTGACAGCATCTTCCACAGCCAGGGCACGCC...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTGCGGCCCCCACTTATTaGGTATTTCGGTCGTCAGCG +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASAAPTY*VFRSSA
Trigger: CGCTGACGACCGAAATACCCAATAAGTGGGGGCCGC...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTAGGGGCCTGGGGCTCTaGCTTTGTCCAGTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: EFGPPVPEDREARPRNIVRGLGL*LCPVVP
Trigger: AGGCACAACTGGACAAAGCCAGAGCCCCAGGCCCCT...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTGGCTTCCATAGCGGGTaGTGGTGTAGGGAGACCTGC +
Preference number: 4 (lower is better)
Translates to: EFGPPVPEDREARPRNIVGFHSG*WCRETC
Trigger: GCAGGTCTCCCTACACCACCACCCGCTATGGAAGCC...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTGCAACCTCCACCTCCTaGGTTCGAGCGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASATSTS*VRAILL
Trigger: CAGGAGAATCGCTCGAACCCAGGAGGTGGAGGTTGC...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCGCTCTGTCGCCAGGCTaGAGTGCAATTGTGCAATCT +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLALSPG*SAIVQS
Trigger: AGATTGCACAATTGCACTCCAGCCTGGCGACAGAGC...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCGGGGGTCTAATTCACTaGAAAACAAGCATAAACCTG +
Preference number: 4 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPGGLIH*KTSINL
Trigger: CAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCC...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTCCTACCCCATCAGGGTaGCTGGCCTTGGTAATCTGG +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASPTPSG*LALVIW
Trigger: CCAGATTACCAAGGCCAGCCACCCTGATGGGGTAGG...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
3UTR CAA 72 bp GCAAAGCCAGGCTTAACCTTGTTTCCCATCCTAAACTaGCCAAGTGTCCTCTCTCTAGGCCTCCCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: AKPGLTLFPILN*PSVLSLGLPVA
Trigger: AGCTACAGGGAGGCCTAGAGAGAGGACACTTGGCAAGTTTAGGATGGGAAACAAGGTTAAGCCTGGCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp CAGATGAATGTTTTAGTATTTTACCGACTGGTAGAGGTGTGTCAACTCTGGGCCTCCCGAAGAGTTTGCTaGAGGTGCCCTGCACCGTCT +
Preference number: 4 (lower is better)
Translates to: QMNVLVFYRLVEVCQLWASRRVC*RCPAPS
Trigger: AGACGGTGCAGGGCACCTTCAGCAAACTCTTCGGGA...GGCCCAGAGTTGACACACCTCTACCAGTCGGTAAAATACTAAAACATTCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS-3UTR TCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTCTGATTTCCACTTGGTaGCACCCCCAGGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASLISTW*HPQGER
Trigger: TCTTTCCCCCTGGGGGTGTCACCAAGTGGAAATCAG...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTAGACTCCTCTGTGTCTaGGTCAGGTCGCCCAACACC +
Preference number: 4 (lower is better)
Translates to: EFGPPVPEDREARPRNIVRLLCV*VRSPNT
Trigger: GGTGTTGGGCGACCTGACTCAGACACAGAGGAGTCT...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAAGTCATGTGGGTGAGCTaGTGGCAGTCTATCCATACT +
Preference number: 4 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQVMWVS*WQSIHT
Trigger: AGTATGGATAGACTGCCATCAGCTCACCCACATGAC...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp TTTAGTATTTTACCGACTGGTAGAGGTGTGTCAACTCTGGGCCCACACTGCTATGTGCCCTGCACCGTCTaGTTCTTTTTCATGCTGCCG +
Preference number: 4 (lower is better)
Translates to: FSILPTGRGVSTLGPHCYVPCTV*FFFMLP
Trigger: CGGCAGCATGAAAAAGAAGCAGACGGTGCAGGGCAC...ATAGCAGTGTGGGCCCAGAGTTGACACACCTCTACCAGTCGGTAAAATACTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS-3UTR GCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCTTGCTGAAGGTGCCCTaGACCGTCTGCTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLLLKVP*TVCFFF
Trigger: GAAAAAGAAGCAGACGGTGCAGGGCACCTTCAGCAA...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTCTGGTGGCCTCTGCCTaGCTGCCATTCAGTGCTACA +
Preference number: 4 (lower is better)
Translates to: EFGPPVPEDREARPRNIVLVASA*LPFSAT
Trigger: TGTAGCACTGAATGGCAGGCAGGCAGAGGCCACCAG...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTAGCTCATTCCGGATCTaGCGCACACTGGGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASSSFRI*RTLGVG
Trigger: TCCAACTCCCAGTGTGCGGCAGATCCGGAATGAGCT...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTGGCTTTGTCCAGTTGTaGCTGCGGCTCAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: EFGPPVPEDREARPRNIVGFVQL*LRLSSV
Trigger: CACAGAGCTGAGCCGCAGGCACAACTGGACAAAGCC...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTCCAGGTGTCCACTCTTaGTTGGGATGGCAGGTGATG +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASPGVHS*LGWQVM
Trigger: CATCACCTGCCATCCCAAGCAAGAGTGGACACCTGG...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTGTCGCCAGGCTGGAGTaGAATTGTGCAATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASVARLE*NCAISA
Trigger: AGCCGAGATTGCACAATTGCACTCCAGCCTGGCGAC...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCTTGTGCTTCCTGAACTaGGATGGACGAAGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLLCFLN*DGRSPD
Trigger: GTCAGGACTTCGTCCATCCCAGTTCAGGAAGCACAA...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCAACATAGCCTTGGGCTaGAGTGATGTAGTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLNIALG*SDVVGS
Trigger: GCTGCCAACTACATCACTCCAGCCCAAGGCTATGTT...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTCCTTCTCAGCCTCCTTaGGTAACTTGGGCACCACAG +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASPSQPP*VTWAPQ
Trigger: CTGTGGTGCCCAAGTTACCCAAGGAGGCTGAGAAGG...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAATCCCCACCCCACACATaGTCCTTCTCCACATGTTAT +
Preference number: 4 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQSPPHT*SFSTCY
Trigger: ATAACATGTGGAGAAGGACCATGTGTGGGGTGGGGA...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTCAGCCCACCTTGACCTaGTCCCAGGAATTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: EFGPPVPEDREARPRNIVQPTLT*SQEFGP
Trigger: TGGGCCAAATTCCTGGGACCAGGTCAAGGTGGGCTG...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTGCCTCTTGTGCTTCCTaGACTGGGATGGACGAAGTC +
Preference number: 4 (lower is better)
Translates to: EFGPPVPEDREARPRNIVASCAS*TGMDEV
Trigger: GACTTCGTCCATCCCAGTTCAGGAAGCACAAGAGGC...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAAAGGGCCAAGGAAAAATaGACCATCAATCTCCCACCT +
Preference number: 4 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQRAKEK*TINLPP
Trigger: AGGTGGGAGATTGATGGTTCATTTTTCCTTGGCCCT...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp CAGATGAATGTTTTAGTATTTTACCGACTGGTAGAGGTGTGTCAACTCTGGGCCGGGCCCACACTGCTATaGATCTGGGTATGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: QMNVLVFYRLVEVCQLWAGPTLL*IWVCVL
Trigger: CAGCACACATACCCAGATTCATAGCAGTGTGGGCCC...GGCCCAGAGTTGACACACCTCTACCAGTCGGTAAAATACTAAAACATTCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS-3UTR GCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTGTGCCCTGCACCGTCTaGTTCTTTTTCATGCTGCCG +
Preference number: 4 (lower is better)
Translates to: EFGPPVPEDREARPRNIVVPCTV*FFFMLP
Trigger: CGGCAGCATGAAAAAGAAGCAGACGGTGCAGGGCAC...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCCCCCAAAATCAGGGCTaGACAGGTCTGAATAGCAAA +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLPQNQG*TGLNSK
Trigger: TTTGCTATTCAGACCTGTGCAGCCCTGATTTTGGGG...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTCCGCACACTGGGAGTTaGAGAGTCTTGGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASPHTGS*RVLGNV
Trigger: TACATTCCCCAAGACTCTCCAACTCCCAGTGTGCGG...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTAAGTGTAGCCTTGGGTaGTATGGCTGGCTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASKCSLG*YGWLRC
Trigger: ACACCTGAGCCAGCCATACCACCCAAGGCTACACTT...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTCAGCGTGGCTGTTCCTaGCTCGCTCACTGTGTTAAA +
Preference number: 4 (lower is better)
Translates to: EFGPPVPEDREARPRNIVQRGCS*LAHCVK
Trigger: TTTAACACAGTGAGCGAGTCAGGAACAGCCACGCTG...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTGGAGTGGAAACTTCTTaGGATGCTGGCTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: EFGPPVPEDREARPRNIVGVETS*DAGFSG
Trigger: GCCAGAGAAGCCAGCATCTCAAGAAGTTTCCACTCC...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCTTCATCACCCAAAGATaGCATTTGCTGAGCAACTAC +
Preference number: 4 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLFITQR*HLLSNY
Trigger: GTAGTTGCTCAGCAAATGGCATCTTTGGGTGATGAA...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp AATGTTTTAGTATTTTACCGACTGGTAGAGGTGTGTCAACTCTGGGCCCACACTACTCTGGGCCCACACTaGTATGAATCTGGGTATGTG +
Preference number: 4 (lower is better)
Translates to: NVLVFYRLVEVCQLWAHTTLGPH*YESGYV
Trigger: CACATACCCAGATTCATAGCAGTGTGGGCCCAGAGT...AGTGTGGGCCCAGAGTTGACACACCTCTACCAGTCGGTAAAATACTAAAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS-3UTR CCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTCTCATCGTTGGTCTTTaGGGATCAAAGACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASLIVGL*GSKTPL
Trigger: CAGAGGAGTCTTTGATCCCCAAAGACCAACGATGAG...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTCTTTCTTCCCTAAAGTaGCTCACCTGCTGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: EFGPPVPEDREARPRNIVLSSLK*LTCCPD
Trigger: GTCAGGACAGCAGGTGAGCCACTTTAGGGAAGAAAG...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp CAGATGAATGTTTTAGTATTTTACCGACTGGTAGAGGTGTGTCAACTCTGGGCCGAGGTGTGTCAACTCTaGGCCCACACTGCTATGAAT +
Preference number: 4 (lower is better)
Translates to: QMNVLVFYRLVEVCQLWAEVCQL*AHTAMN
Trigger: ATTCATAGCAGTGTGGGCCCAGAGTTGACACACCTC...GGCCCAGAGTTGACACACCTCTACCAGTCGGTAAAATACTAAAACATTCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS-3UTR TCA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTGTGGGATTTGCTTCTTaGACACAGATAACCAGACCC +
Preference number: 4 (lower is better)
Translates to: EFGPPVPEDREARPRNIVVGFAS*TQITRP
Trigger: GGGTCTGGTTATCTGTGTTCAAGAAGCAAATCCCAC...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR GCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTGACAGACTATTAGCTTaGCATGAACAGGAGTCATGT +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASDRLLA*HEQESC
Trigger: ACATGACTCCTGTTCATGGCAAGCTAATAGTCTGTC...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTACAACCAGCCTCGGCTaGTTACCACAAATAATAAAG +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASTTSLG*LPQIIK
Trigger: CTTTATTATTTGTGGTAACCAGCCGAGGCTGGTTGT...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTCATCAAGAGTATTGGTaGCTTGTAGTATCAGTGTTA +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASHQEYW*LVVSVL
Trigger: TAACACTGATACTACAAGTCACCAATACTCTTGATG...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR TCA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTCTTTATGGAAAACTGTaGCAGGCCATATACAAATGT +
Preference number: 4 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASLYGKL*QAIYKC
Trigger: ACATTTGTATATGGCCTGTCACAGTTTTCCATAAAG...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 90 bp CAGCTGGGGCGAAGCCGTAGTCGGCGCTGCCGGGCGCTTTGTGCTTaGCCTCCGCGGCGCCCCGGGCGGCGCCCTCCAGGGACAGCCTCG +
Preference number: 5 (lower is better)
Translates to: QLGRSRSRRCRALCA*PPRRPGRRPPGTAS
Trigger: CGAGGCTGTCCCTGGAGGGCGCCGCCCGGGGCGCCGCGGAGGCCAAGCACAAAGCGCCCGGCAGCGCCGACTACGGCTTCGCCCCAGCTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS GCA 90 bp CGGGGCCTCCGGGCTGCGGCCCGAAGCAGTTGGGAGAGCTCAGGCTaGGGCCGGTGCCACCGTGGGGTAGCCCTGGGCCTCGGTGCGGCT +
Preference number: 5 (lower is better)
Translates to: RGLRAAARSSWESSG*GRCHRGVALGLGAA
Trigger: AGCCGCACCGAGGCCCAGGGCTACCCCACGGTGGCACCGGCCGCAGCCTGAGCTCTCCCAACTGCTTCGGGCCGCAGCCCGGAGGCCCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS GCA 90 bp TGTAGGGAGACCTGCCGGCAGCTGGGGCGAAGCCGTAGTCGGCGCTaGCGGGCGCTTTGTGCTTGGCCTCCGCGGCGCCCCGGGCGGCGC +
Preference number: 5 (lower is better)
Translates to: CRETCRQLGRSRSRR*RALCAWPPRRPGRR
Trigger: GCGCCGCCCGGGGCGCCGCGGAGGCCAAGCACAAAGCGCCCGGCAGCGCCGACTACGGCTTCGCCCCAGCTGCCGGCAGGTCTCCCTACA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS GCA 90 bp CGGGCTGCGGCCCGAAGCAGTTGGGAGAGCTCAGGCTGCGGCCGGTaGCACCGTGGGGTAGCCCTGGGCCTCGGTGCGGCTCCCCGACGT +
Preference number: 5 (lower is better)
Translates to: RAAARSSWESSGCGR*HRGVALGLGAAPRR
Trigger: ACGTCGGGGAGCCGCACCGAGGCCCAGGGCTACCCCACGGTGGCACCGGCCGCAGCCTGAGCTCTCCCAACTGCTTCGGGCCGCAGCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS GCA 90 bp GCGCGACCCGCCGAGTTCACGCGCCGCATCTCGGGGCCTCCGGGCTaGGGCCCGAAGCAGTTGGGAGAGCTCAGGCTGCGGCCGGTGCCA +
Preference number: 5 (lower is better)
Translates to: ARPAEFTRRISGPPG*GPKQLGELRLRPVP
Trigger: TGGCACCGGCCGCAGCCTGAGCTCTCCCAACTGCTTCGGGCCGCAGCCCGGAGGCCCCGAGATGCGGCGCGTGAACTCGGCGGGTCGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 90 bp GGCCCGAAGCAGTTGGGAGAGCTCAGGCTGCGGCCGGTGCCACCGTaGGGTAGCCCTGGGCCTCGGTGCGGCTCCCCGACGTACAGGCGC +
Preference number: 5 (lower is better)
Translates to: GPKQLGELRLRPVPP*GSPGPRCGSPTYRR
Trigger: GCGCCTGTACGTCGGGGAGCCGCACCGAGGCCCAGGGCTACCCCACGGTGGCACCGGCCGCAGCCTGAGCTCTCCCAACTGCTTCGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 90 bp TCACGCGCCGCATCTCGGGGCCTCCGGGCTGCGGCCCGAAGCAGTTaGGAGAGCTCAGGCTGCGGCCGGTGCCACCGTGGGGTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: SRAASRGLRAAARSS*ESSGCGRCHRGVAL
Trigger: CAGGGCTACCCCACGGTGGCACCGGCCGCAGCCTGAGCTCTCCCAACTGCTTCGGGCCGCAGCCCGGAGGCCCCGAGATGCGGCGCGTGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS GCA 90 bp CCCGCGCGGGCGCCAGGGAAGGACCTTCCCTCCCTCGCCCTGCCCTaGCCCGGACTGAACTCAGCACGGTCTCCCCAGGGGACTCTACCA +
Preference number: 5 (lower is better)
Translates to: PARAPGKDLPSLALP*PGLNSARSPQGTLP
Trigger: TGGTAGAGTCCCCTGGGGAGACCGTGCTGAGTTCAGTCCGGGGCAGGGCAGGGCGAGGGAGGGAAGGTCCTTCCCTGGCGCCCGCGCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341865.9
ENST00000356542.5
CDS GCA 90 bp CTCAGGCTGCGGCCGGTGCCACCGTGGGGTAGCCCTGGGCCTCGGTaGGGCTCCCCGACGTACAGGCGCTTCTTTATGAGCGAGCGGCCC +
Preference number: 5 (lower is better)
Translates to: LRLRPVPPWGSPGPR*GSPTYRRFFMSERP
Trigger: GGGCCGCTCGCTCATAAAGAAGCGCCTGTACGTCGGGGAGCCGCACCGAGGCCCAGGGCTACCCCACGGTGGCACCGGCCGCAGCCTGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS TCA 90 bp GGCAGAGAGGACCGACCCAGGGCAGCCCCTACAGACCTTCCCTTCTaGGCCCTCTGCCTGGCCGCCAGGAGCAGGGCCATCGGCGAGCCC +
Preference number: 5 (lower is better)
Translates to: GREDRPRAAPTDLPF*ALCLAARSRAIGEP
Trigger: GGGCTCGCCGATGGCCCTGCTCCTGGCGGCCAGGCAGAGGGCTCAGAAGGGAAGGTCTGTAGGGGCTGCCCTGGGTCGGTCCTCTCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS TCA 90 bp CCATCGGCGAGCCCCGCTCCACCACCTCCCCAGTCACCGGGTGCCTaGGGAGTTCATCAGTGGGCTGGGCCGAGGCAGGAGGCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: PSASPAPPPPQSPGA*GVHQWAGPRQEAWL
Trigger: CAGCCAAGCCTCCTGCCTCGGCCCAGCCCACTGATGAACTCCTCAGGCACCCGGTGACTGGGGAGGTGGTGGAGCGGGGCTCGCCGATGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS GCA 90 bp GCAGGCTCAGGAGAGTCTCCTTCTCAGGCAGGCGGGGGCCCTTCTTaGCCTCCTTGCTCTGAGGGGCCACTGTTGGGCCTGGCCTGTGAC +
Preference number: 5 (lower is better)
Translates to: AGSGESPSQAGGGPS*PPCSEGPLLGLACD
Trigger: GTCACAGGCCAGGCCCAACAGTGGCCCCTCAGAGCAAGGAGGGCAAGAAGGGCCCCCGCCTGCCTGAGAAGGAGACTCTCCTGAGCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 90 bp TCGTTCATCTGCTTGGGACTGGGACTGGCCAAGCCTTGGGCTGGCTaGTGCTGTGGCCTTGAGCTCCCCAGGGCAGTCTGGCTCGGGGGC +
Preference number: 5 (lower is better)
Translates to: SFICLGLGLAKPWAG*CCGLELPRAVWLGG
Trigger: GCCCCCGAGCCAGACTGCCCTGGGGAGCTCAAGGCCACAGCACCAGCCAGCCCAAGGCTTGGCCAGTCCCAGTCCCAAGCAGATGAACGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 90 bp GGCGTGCCCTGGCTGTGGAAGATGCTGTCAGAGCTGGCCTCGGCTTaGTGGCTGTGGTCACGGAGACTTCCTGGCAGAGAGGACCGACCC +
Preference number: 5 (lower is better)
Translates to: GVPWLWKMLSELASA*WLWSRRLPGREDRP
Trigger: GGGTCGGTCCTCTCTGCCAGGAAGTCTCCGTGACCACAGCCACCAAGCCGAGGCCAGCTCTGACAGCATCTTCCACAGCCAGGGCACGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 90 bp GGCCGGGGCCGGGGGCTCAGGGTCATTGCTGAACTCTGGCGGCGGTaGGATGACCTCGAAGTTGAACTCCTCCTCCTCCTCCTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: GRGRGLRVIAELWRR*DDLEVELLLLLLPL
Trigger: AAGAGGGAGGAGGAGGAGGAGGAGTTCAACTTCGAGGTCATCCCACCGCCGCCAGAGTTCAGCAATGACCCTGAGCCCCCGGCCCCGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTGCGCTGCCGGGCGCTTaGTGCTTGGCCTCCGCGGCG +
Preference number: 5 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACALPGA*CLASAA
Trigger: CGCCGCGGAGGCCAAGCACAAAGCGCCCGGCAGCGC...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 90 bp GTCAGAGCTGGCCTCGGCTTGGTGGCTGTGGTCACGGAGACTTCCTaGCAGAGAGGACCGACCCAGGGCAGCCCCTACAGACCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: VRAGLGLVAVVTETS*QRGPTQGSPYRPSL
Trigger: AAGGGAAGGTCTGTAGGGGCTGCCCTGGGTCGGTCCTCTCTGCCAGGAAGTCTCCGTGACCACAGCCACCAAGCCGAGGCCAGCTCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 90 bp GTGCCCTGGCTGTGGAAGATGCTGTCAGAGCTGGCCTCGGCTTGGTaGCTGTGGTCACGGAGACTTCCTGGCAGAGAGGACCGACCCAGG +
Preference number: 5 (lower is better)
Translates to: VPWLWKMLSELASAW*LWSRRLPGREDRPR
Trigger: CCTGGGTCGGTCCTCTCTGCCAGGAAGTCTCCGTGACCACAGCCACCAAGCCGAGGCCAGCTCTGACAGCATCTTCCACAGCCAGGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 90 bp TGGGGGAGGTTGGAGGGAGCTACTCTTTCCCAGGCCACAGGGGCCTaGGGCTCTGGCTTTGTCCAGTTGTGCCTGCGGCTCAGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: WGRLEGATLSQATGA*GSGFVQLCLRLSSV
Trigger: CACAGAGCTGAGCCGCAGGCACAACTGGACAAAGCCAGAGCCCCAGGCCCCTGTGGCCTGGGAAAGAGTAGCTCCCTCCAACCTCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 90 bp ATACTGGAGGGCCGGGGCCGGGGGCTCAGGGTCATTGCTGAACTCTaGCGGCGGTGGGATGACCTCGAAGTTGAACTCCTCCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: ILEGRGRGLRVIAEL*RRWDDLEVELLLLL
Trigger: GAGGAGGAGGAGGAGTTCAACTTCGAGGTCATCCCACCGCCGCCAGAGTTCAGCAATGACCCTGAGCCCCCGGCCCCGGCCCTCCAGTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS TCA 90 bp GCTAAGAGAACCCCTGGCTCAGGAGGTGGCTTTCCGATGGGCCCCTaGGCAGACATAGGAGATGGGATGGCGGGTCCCAGGCCTCACGGT +
Preference number: 5 (lower is better)
Translates to: AKRTPGSGGGFPMGP*ADIGDGMAGPRPHG
Trigger: ACCGTGAGGCCTGGGACCCGCCATCCCATCTCCTATGTCTGCTCAGGGGCCCATCGGAAAGCCACCTCCTGAGCCAGGGGTTCTCTTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 90 bp GCTCTGTGCCCTCTGCGTCTCTTCCCAGCCGCGGCCCCCACTTATTaGGTATTTCGGTCGTCAGCGGGGAGTCCTTCTCAGCCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: ALCPLRLFPAAAPTY*VFRSSAGSPSQPPW
Trigger: CCAAGGAGGCTGAGAAGGACTCCCCGCTGACGACCGAAATACCCAATAAGTGGGGGCCGCGGCTGGGAAGAGACGCAGAGGGCACAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS TCA 90 bp TGCCCTCCTTGCTCTGAGGGGCCACTGTTGGGCCTGGCCTGTGACTaGGGAATCGGTCCTCTCTCCTGGAGCCACAGAGATAGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: CPPCSEGPLLGLACD*GIGPLSWSHRDRLP
Trigger: TGGCAGCCTATCTCTGTGGCTCCAGGAGAGAGGACCGATTCCTCAGTCACAGGCCAGGCCCAACAGTGGCCCCTCAGAGCAAGGAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS TCA 90 bp AGGGGGCAGAGATCCTATGCTGGGCTTAGCCTCCTTCTCTGCTGCTaGGGAGAGCCGGGCCTCCAGCTCATTCCGGATCTGCCGCACACT +
Preference number: 5 (lower is better)
Translates to: RGQRSYAGLSLLLCC*GEPGLQLIPDLPHT
Trigger: AGTGTGCGGCAGATCCGGAATGAGCTGGAGGCCCGGCTCTCCTCAGCAGCAGAGAAGGAGGCTAAGCCCAGCATAGGATCTCTGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 90 bp GAGCCGGGCCTCCAGCTCATTCCGGATCTGCCGCACACTGGGAGTTaGAGAGTCTTGGGGAATGTAGTCCACAGAGGGCAGGGTCAGGCT +
Preference number: 5 (lower is better)
Translates to: EPGLQLIPDLPHTGS*RVLGNVVHRGQGQA
Trigger: AGCCTGACCCTGCCCTCTGTGGACTACATTCCCCAAGACTCTCCAACTCCCAGTGTGCGGCAGATCCGGAATGAGCTGGAGGCCCGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 90 bp CTGAGGAGAGCCGGGCCTCCAGCTCATTCCGGATCTGCCGCACACTaGGAGTTGGAGAGTCTTGGGGAATGTAGTCCACAGAGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: LRRAGPPAHSGSAAH*ELESLGECSPQRAG
Trigger: CCCTGCCCTCTGTGGACTACATTCCCCAAGACTCTCCAACTCCCAGTGTGCGGCAGATCCGGAATGAGCTGGAGGCCCGGCTCTCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCTGCGGCCCGAAGCAGTaGGGAGAGCTCAGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPCGPKQ*GELRLR
Trigger: CCGCAGCCTGAGCTCTCCCAACTGCTTCGGGCCGCA...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS TCA 90 bp GCGGGGAGTCCTTCTCAGCCTCCTTGGGTAACTTGGGCACCACAGTaGAGGAGTTGGGCGTGCCCTGGCTGTGGAAGATGCTGTCAGAGC +
Preference number: 5 (lower is better)
Translates to: AGSPSQPPWVTWAPQ*RSWACPGCGRCCQS
Trigger: GCTCTGACAGCATCTTCCACAGCCAGGGCACGCCCAACTCCTTCACTGTGGTGCCCAAGTTACCCAAGGAGGCTGAGAAGGACTCCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 90 bp CTCACGGCTGAGGCTGCTCTGGTGGCAGTGGGGCTTGTAGAGACATaGCACCTCTCCTCCACCAGGAGATGTCTTTGGTGGGAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: LTAEAALVAVGLVET*HLSSTRRCLWWEGC
Trigger: GCAGCCTTCCCACCAAAGACATCTCCTGGTGGAGGAGAGGTGCCATGTCTCTACAAGCCCCACTGCCACCAGAGCAGCCTCAGCCGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 90 bp GGTAACTTGGGCACCACAGTGAAGGAGTTGGGCGTGCCCTGGCTGTaGAAGATGCTGTCAGAGCTGGCCTCGGCTTGGTGGCTGTGGTCA +
Preference number: 5 (lower is better)
Translates to: GNLGTTVKELGVPWL*KMLSELASAWWLWS
Trigger: TGACCACAGCCACCAAGCCGAGGCCAGCTCTGACAGCATCTTCCACAGCCAGGGCACGCCCAACTCCTTCACTGTGGTGCCCAAGTTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 90 bp TCCTTGGGTAACTTGGGCACCACAGTGAAGGAGTTGGGCGTGCCCTaGCTGTGGAAGATGCTGTCAGAGCTGGCCTCGGCTTGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: SLGNLGTTVKELGVP*LWKMLSELASAWWL
Trigger: CAGCCACCAAGCCGAGGCCAGCTCTGACAGCATCTTCCACAGCCAGGGCACGCCCAACTCCTTCACTGTGGTGCCCAAGTTACCCAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCCCTGGGGCTCTGGCTTaGTCCAGTTGTGCCTGCGGC +
Preference number: 5 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPPGALA*SSCACG
Trigger: GCCGCAGGCACAACTGGACAAAGCCAGAGCCCCAGG...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS TCA 90 bp GCTGGCTCTGGTGGCCTCTGCCTGCCTGCCATTCAGTGCTACATCTaGTTTCCACTTGGTGACACCCCCAGGGGGAAAGAGACGAGTCCC +
Preference number: 5 (lower is better)
Translates to: AGSGGLCLPAIQCYI*FPLGDTPRGKETSP
Trigger: GGGACTCGTCTCTTTCCCCCTGGGGGTGTCACCAAGTGGAAATCAGATGTAGCACTGAATGGCAGGCAGGCAGAGGCCACCAGAGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS GCA 90 bp GTGACTGAGGAATCGGTCCTCTCTCCTGGAGCCACAGAGATAGGCTaGCAGCTCGTTCCGCAGCTTTTCCATCTGGCTGGGGTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: VTEESVLSPGATEIG*QLVPQLFHLAGVPP
Trigger: TGGAGGGACCCCAGCCAGATGGAAAAGCTGCGGAACGAGCTGGCAGCCTATCTCTGTGGCTCCAGGAGAGAGGACCGATTCCTCAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 90 bp CACAGAGATAGGCTGCCAGCTCGTTCCGCAGCTTTTCCATCTGGCTaGGGTCCCTCCAGTCCACAGGTGCTGAAGACGCTGTGTTCTCTG +
Preference number: 5 (lower is better)
Translates to: HRDRLPARSAAFPSG*GPSSPQVLKTLCSL
Trigger: CAGAGAACACAGCGTCTTCAGCACCTGTGGACTGGAGGGACCCCAGCCAGATGGAAAAGCTGCGGAACGAGCTGGCAGCCTATCTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp CGACTGGTAGAGGTGTGTCAACTCTGGGCCCACACTGCTATGAATCTGGGTATGCCCAGGAGGTGGAGGTaGCAGGGAGCCGAGATCACG +
Preference number: 5 (lower is better)
Translates to: RLVEVCQLWAHTAMNLGMPRRWR*QGAEIT
Trigger: CGTGATCTCGGCTCCCTGCAACCTCCACCTCCTGGG...CATACCCAGATTCATAGCAGTGTGGGCCCAGAGTTGACACACCTCTACCAGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS CCA 90 bp GGGAGCCTCTTGTGCTTCCTGAACTGGGATGGACGAAGTCCTGACTaGGGTTGGGGGAGGCACTTTGAAAGAACGGGGGAAGGTGAGATG +
Preference number: 5 (lower is better)
Translates to: GSLLCFLNWDGRSPD*GWGRHFERTGEGEM
Trigger: CATCTCACCTTCCCCCGTTCTTTCAAAGTGCCTCCCCCAACCCCAGTCAGGACTTCGTCCATCCCAGTTCAGGAAGCACAAGAGGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 90 bp TGTCTCTGTCAGGCTGCTGCCGCCAAGACTCTTTTCAGGAACACCTaGGGGAGTGTCCTTTGCTGGCAGGCTCAGGAGAGTCTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: CLCQAAAAKTLFRNT*GSVLCWQAQESLLL
Trigger: GAGAAGGAGACTCTCCTGAGCCTGCCAGCAAAGGACACTCCCCCAGGTGTTCCTGAAAAGAGTCTTGGCGGCAGCAGCCTGACAGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCGCAGGGGCCGGACTCTaGGCCGAGCTTTCAGCGTGG +
Preference number: 5 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLAGAGL*AELSAW
Trigger: CCACGCTGAAAGCTCGGCCAAGAGTCCGGCCCCTGC...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCGCCGCACACTGGGAGTaGGAGAGTCTTGGGGAATGT +
Preference number: 5 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPAAHWE*ESLGEC
Trigger: ACATTCCCCAAGACTCTCCAACTCCCAGTGTGCGGC...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCCAGCAGGGTGGTGGATaGAGGTGGCAGATTCTTGGC +
Preference number: 5 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPQQGGG*RWQILG
Trigger: GCCAAGAATCTGCCACCTCAATCCACCACCCTGCTG...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCGGCCAAAGTGTAGCCTaGGGTGGTATGGCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPGQSVA*GGMAGS
Trigger: TGAGCCAGCCATACCACCCAAGGCTACACTTTGGCC...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTTCCTCCTCCTCCCTCTaGTTCGAAGGAGAAGGTGGG +
Preference number: 5 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACSSSSL*FEGEGG
Trigger: CCCACCTTCTCCTTCGAACAAGAGGGAGGAGGAGGA...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTGGGATGACCTCGAAGTaGAACTCCTCCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACGMTSK*NSSSSS
Trigger: GGAGGAGGAGGAGGAGTTCAACTTCGAGGTCATCCC...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCCCTGGTCCCAGGAATTaGGCCCACCAGTACCTGAAG +
Preference number: 5 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPPGPRN*AHQYLK
Trigger: CTTCAGGTACTGGTGGGCCAAATTCCTGGGACCAGG...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAAGCTGGTGCTGTGGCCTaGAGCTCCCCAGGGCAGTCT +
Preference number: 5 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQAGAVA*SSPGQS
Trigger: AGACTGCCCTGGGGAGCTCAAGGCCACAGCACCAGC...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAAAGAGCTGGCCTCGGCTaGGTGGCTGTGGTCACGGAG +
Preference number: 5 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQRAGLG*VAVVTE
Trigger: CTCCGTGACCACAGCCACCAAGCCGAGGCCAGCTCT...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAAGGGGGCTCAGGGTCATaGCTGAACTCTGGCGGCGGT +
Preference number: 5 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQGGSGS*LNSGGG
Trigger: ACCGCCGCCAGAGTTCAGCAATGACCCTGAGCCCCC...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS TCA 90 bp CAGCAGGGGCCGGACTCTTGGCCGAGCTTTCAGCGTGGCTGTTCCTaGCTCGCTCACTGTGTTAAACCGATTGTCTCCATAATAGATGCC +
Preference number: 5 (lower is better)
Translates to: QQGPDSWPSFQRGCS*LAHCVKPIVSIIDA
Trigger: GGCATCTATTATGGAGACAATCGGTTTAACACAGTGAGCGAGTCAGGAACAGCCACGCTGAAAGCTCGGCCAAGAGTCCGGCCCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341865.9
ENST00000356542.5
CDS-3UTR CAA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCCTGGGGGAGTGTCCTTaGCTGGCAGGCTCAGGAGAG +
Preference number: 5 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLLGECP*LAGSGE
Trigger: CTCTCCTGAGCCTGCCAGCAAAGGACACTCCCCCAG...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTGGGAGTTGGAGAGTCTaGGGGAATGTAGTCCACAGA +
Preference number: 5 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACGSWRV*GNVVHR
Trigger: TCTGTGGACTACATTCCCCAAGACTCTCCAACTCCC...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCACCACAGTGAAGGAGTaGGGCGTGCCCTGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLTTVKE*GVPWLW
Trigger: CCACAGCCAGGGCACGCCCAACTCCTTCACTGTGGT...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp CGACTGGTAGAGGTGTGTCAACTCTGGGCCCACACTGCTATGAATCTGGGTATGTTCTTCCCGAAGAGTTaGCTGAAGGTGCCCTGCACC +
Preference number: 5 (lower is better)
Translates to: RLVEVCQLWAHTAMNLGMFFPKS*LKVPCT
Trigger: GGTGCAGGGCACCTTCAGCAAACTCTTCGGGAAGAA...CATACCCAGATTCATAGCAGTGTGGGCCCAGAGTTGACACACCTCTACCAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS-3UTR CAA 90 bp AATGTTTTAGTATTTTACCGACTGGTAGAGGTGTGTCAACTCTGGGCCCACACTGCAGGGGCCGGACTCTaGGCCGAGCTTTCAGCGTGG +
Preference number: 5 (lower is better)
Translates to: NVLVFYRLVEVCQLWAHTAGAGL*AELSAW
Trigger: CCACGCTGAAAGCTCGGCCAAGAGTCCGGCCCCTGC...AGTGTGGGCCCAGAGTTGACACACCTCTACCAGTCGGTAAAATACTAAAACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS-3UTR CAA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTCCAGGGCGCTCCCCTTaGGCTCAGCAGGGCTTCTCG +
Preference number: 5 (lower is better)
Translates to: EFGPPVPEDREARPRNIVPGRSP*AQQGFS
Trigger: CGAGAAGCCCTGCTGAGCCAAAGGGGAGCGCCCTGG...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTGGCTCAGGTGTGGCCTaGGGTGGTATGGCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASGSGVA*GGMAGP
Trigger: GGGACCAGCCATACCACCCAAGGCCACACCTGAGCC...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCCGCGGCCCCCACTTATaGGGTATTTCGGTCGTCAGC +
Preference number: 5 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLRGPHL*GISVVS
Trigger: GCTGACGACCGAAATACCCAATAAGTGGGGGCCGCG...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAAGTTGGGGGAGGCACTTaGAAAGAACGGGGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQVGGGT*KERGKV
Trigger: CACCTTCCCCCGTTCTTTCAAAGTGCCTCCCCCAAC...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAATCAGTGCCCCACCCCTaGCTTTCAGAACCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQSVPHP*LSEPAQ
Trigger: CTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGA...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCCCCAGGTGTCCACTCTaGCTTGGGATGGCAGGTGAT +
Preference number: 5 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLPRCPL*LGMAGD
Trigger: ATCACCTGCCATCCCAAGCAAGAGTGGACACCTGGG...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCCTGAGGCAGCCCACCTaGACCTGGTCCCAGGAATTT +
Preference number: 5 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLLRQPT*TWSQEF
Trigger: AAATTCCTGGGACCAGGTCAAGGTGGGCTGCCTCAG...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp GGGCCTGACAGGCAATCACAGCTATCTCGATGGGTTCCAGTTCAGTCAGTGCCCGGTGGGATTTGCTTCTaGAACACAGATAACCAGACC +
Preference number: 5 (lower is better)
Translates to: GPDRQSQLSRWVPVQSVPGGICF*NTDNQT
Trigger: GGTCTGGTTATCTGTGTTCAAGAAGCAAATCCCACC...GGGCACTGACTGAACTGGAACCCATCGAGATAGCTGTGATTGCCTGTCAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 90 bp CCCCCACAAGAAACAAGTGCCCAGATCCTTAAAGACACAGTTTGTTaGAGTAGAGCTAAGAGAACCCCTGGCTCAGGAGGTGGCTTTCCG +
Preference number: 5 (lower is better)
Translates to: PPQETSAQILKDTVC*SRAKRTPGSGGGFP
Trigger: CGGAAAGCCACCTCCTGAGCCAGGGGTTCTCTTAGCTCTACTCCAACAAACTGTGTCTTTAAGGATCTGGGCACTTGTTTCTTGTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAATTCTTCCCGAAGAGTTaGCTGAAGGTGCCCTGCACC +
Preference number: 5 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQFFPKS*LKVPCT
Trigger: GGTGCAGGGCACCTTCAGCAAACTCTTCGGGAAGAA...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCACATCTGATTTCCACTaGGTGACACCCCCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLTSDFH*VTPPGG
Trigger: TCCCCCTGGGGGTGTCACCAAGTGGAAATCAGATGT...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp TCAGTCAGTGCCCCACCCCTTGCTTTCAGAACCTGCTCAGTAGGCCGTGCTTGTTTTCCCATCCTAAACTaGCCAAGTGTCCTCTCTCTA +
Preference number: 5 (lower is better)
Translates to: SVSAPPLAFRTCSVGRACFPILN*PSVLSL
Trigger: TAGAGAGAGGACACTTGGCAAGTTTAGGATGGGAAA...ACAAGCACGGCCTACTGAGCAGGTTCTGAAAGCAAGGGGTGGGGCACTGACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTCTTCTCTGCCATCAGTaGGGATGTGGTGGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASLLCHQ*GCGGGQ
Trigger: CTGCCCACCACCACATCCCAACTGATGGCAGAGAAG...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCGGGAGTGGAAACTTCTaGAGATGCTGGCTTCTCTGG +
Preference number: 5 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLGSGNF*RCWLLW
Trigger: CCAGAGAAGCCAGCATCTCAAGAAGTTTCCACTCCC...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTCTTTCGGGGAGCCTCTaGTGCTTCCTGAACTGGGAT +
Preference number: 5 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASLSGSL*CFLNWD
Trigger: ATCCCAGTTCAGGAAGCACAAGAGGCTCCCCGAAAG...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTAGCTCGTTCATCTGCTaGGGACTGGGACTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: EFGPPVPEDREARPRNIVSSFIC*GLGLAK
Trigger: CTTGGCCAGTCCCAGTCCCAAGCAGATGAACGAGCT...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp GGAAGGGGGTCTAATTCACTGGAAAACAAGCATAAACCTGGACTGCCCAGGCAAACAGGCTTGGAGAGTTaGTCATCATCAGCCCCGTTT +
Preference number: 5 (lower is better)
Translates to: GRGSNSLENKHKPGLPRQTGLES*SSSAPF
Trigger: AAACGGGGCTGATGATGACAAACTCTCCAAGCCTGT...TTGCCTGGGCAGTCCAGGTTTATGCTTGTTTTCCAGTGAATTAGACCCCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTAGTCACACCAGCGCTTaGGGAAACAGAAGCCCACTC +
Preference number: 5 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASSHTSA*GNRSPL
Trigger: GAGTGGGCTTCTGTTTCCCAAAGCGCTGGTGTGACT...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCTTCTTGGCCACAGGCTaGGAGAGTTTGTCATCATCA +
Preference number: 5 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLFLATG*ESLSSS
Trigger: TGATGATGACAAACTCTCCAAGCCTGTGGCCAAGAA...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTGGTCCCAACATAGCCTaGGGCTGGAGTGATGTAGTT +
Preference number: 5 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASGPNIA*GWSDVV
Trigger: AACTACATCACTCCAGCCCAAGGCTATGTTGGGACC...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTCAGGCTGGAGTGCAATaGTGCAATCTCGGCTCACTG +
Preference number: 5 (lower is better)
Translates to: EFGPPVPEDREARPRNIVQAGVQ*CNLGSL
Trigger: CAGTGAGCCGAGATTGCACAATTGCACTCCAGCCTG...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTAGTCGGAGGTTGCCATaGACTAGTGAGCTGGTACCT +
Preference number: 5 (lower is better)
Translates to: EFGPPVPEDREARPRNIVSRRLP*TSELVP
Trigger: AGGTACCAGCTCACTAGTCAATGGCAACCTCCGACT...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTTCTCATCGTTGGTCTTaGGGGATCAAAGACTCCTCT +
Preference number: 5 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASSHRWS*GIKDSS
Trigger: AGAGGAGTCTTTGATCCCCAAAGACCAACGATGAGA...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTAAGCCAGGCTTAACCTaGTTTCCCATCCTAAACTTG +
Preference number: 5 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASKPGLT*FPILNL
Trigger: CAAGTTTAGGATGGGAAACAAGGTTAAGCCTGGCTT...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp AATCCTACCACTCTTGACTTTCCCAAACACATTCCCCAACAGCAGCAAGCTTCTACTAAGCACAGTGGCTaGTATCCAGTAGTTACCCAA +
Preference number: 5 (lower is better)
Translates to: NPTTLDFPKHIPQQQQASTKHSG*YPVVTQ
Trigger: TTGGGTAACTACTGGATACAAGCCACTGTGCTTAGT...AGAAGCTTGCTGCTGTTGGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTCCAATCCTACCACTCTaGACTTTCCCAAACACATTC +
Preference number: 5 (lower is better)
Translates to: EFGPPVPEDREARPRNIVPILPL*TFPNTF
Trigger: GAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATTGG...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp TCACCACCACAAGAGGCCTTCCCTGACTACCCTGTTAAAGTAAATCCACTCCTCTGTTTCCTGATATGTTaGGTGATCACAGCATCTAAA +
Preference number: 5 (lower is better)
Translates to: SPPQEAFPDYPVKVNPLLCFLIC*VITASK
Trigger: TTTAGATGCTGTGATCACCAAACATATCAGGAAACA...GAGGAGTGGATTTACTTTAACAGGGTAGTCAGGGAAGGCCTCTTGTGGTGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS-3UTR CAA 90 bp GAATTTGGCCCACCAGTACCTGAAGATAGGGAAGCAAGACCAAGGAATATTGTTAAGGCATCAAGAGTATaGGTGACTTGTAGTATCAGT +
Preference number: 5 (lower is better)
Translates to: EFGPPVPEDREARPRNIVKASRV*VTCSIS
Trigger: ACTGATACTACAAGTCACCAATACTCTTGATGCCTT...AACAATATTCCTTGGTCTTGCTTCCCTATCTTCAGGTACTGGTGGGCCAAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 72 bp CGAAGCCGTAGTCGGCGCTGCCGGGCGCTTTGTGCTTaGCCTCCGCGGCGCCCCGGGCGGCGCCCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: RSRSRRCRALCA*PPRRPGRRPPG
Trigger: CCCTGGAGGGCGCCGCCCGGGGCGCCGCGGAGGCCAAGCACAAAGCGCCCGGCAGCGCCGACTACGGCTTCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS GCA 72 bp ACCTGCCGGCAGCTGGGGCGAAGCCGTAGTCGGCGCTaGCGGGCGCTTTGTGCTTGGCCTCCGCGGCGCCCC +
Preference number: 6 (lower is better)
Translates to: TCRQLGRSRSRR*RALCAWPPRRP
Trigger: GGGGCGCCGCGGAGGCCAAGCACAAAGCGCCCGGCAGCGCCGACTACGGCTTCGCCCCAGCTGCCGGCAGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 72 bp CAGTTGGGAGAGCTCAGGCTGCGGCCGGTGCCACCGTaGGGTAGCCCTGGGCCTCGGTGCGGCTCCCCGACG +
Preference number: 6 (lower is better)
Translates to: QLGELRLRPVPP*GSPGPRCGSPT
Trigger: CGTCGGGGAGCCGCACCGAGGCCCAGGGCTACCCCACGGTGGCACCGGCCGCAGCCTGAGCTCTCCCAACTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 72 bp GCATCTCGGGGCCTCCGGGCTGCGGCCCGAAGCAGTTaGGAGAGCTCAGGCTGCGGCCGGTGCCACCGTGGG +
Preference number: 6 (lower is better)
Translates to: ASRGLRAAARSS*ESSGCGRCHRG
Trigger: CCCACGGTGGCACCGGCCGCAGCCTGAGCTCTCCCAACTGCTTCGGGCCGCAGCCCGGAGGCCCCGAGATGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CAA 72 bp CGCATCTCGGGGCCTCCGGGCTGCGGCCCGAAGCAGTaGGGAGAGCTCAGGCTGCGGCCGGTGCCACCGTGG +
Preference number: 6 (lower is better)
Translates to: RISGPPGCGPKQ*GELRLRPVPPW
Trigger: CCACGGTGGCACCGGCCGCAGCCTGAGCTCTCCCAACTGCTTCGGGCCGCAGCCCGGAGGCCCCGAGATGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS GCA 72 bp GCCGAGTTCACGCGCCGCATCTCGGGGCCTCCGGGCTaGGGCCCGAAGCAGTTGGGAGAGCTCAGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: AEFTRRISGPPG*GPKQLGELRLR
Trigger: CCGCAGCCTGAGCTCTCCCAACTGCTTCGGGCCGCAGCCCGGAGGCCCCGAGATGCGGCGCGTGAACTCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CAA 90 bp TTCACGCGCCGCATCTCGGGGCCTCCGGGCTGCGGCCCGAAGCAGTaGGGAGAGCTCAGGCTGCGGCCGGTGCCACCGTGGGGTAGCCCT +
Preference number: 6 (lower is better)
Translates to: FTRRISGPPGCGPKQ*GELRLRPVPPWGSP
Trigger: AGGGCTACCCCACGGTGGCACCGGCCGCAGCCTGAGCTCTCCCAACTGCTTCGGGCCGCAGCCCGGAGGCCCCGAGATGCGGCGCGTGAA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS GCA 72 bp GCGCCAGGGAAGGACCTTCCCTCCCTCGCCCTGCCCTaGCCCGGACTGAACTCAGCACGGTCTCCCCAGGGG +
Preference number: 6 (lower is better)
Translates to: APGKDLPSLALP*PGLNSARSPQG
Trigger: CCCCTGGGGAGACCGTGCTGAGTTCAGTCCGGGGCAGGGCAGGGCGAGGGAGGGAAGGTCCTTCCCTGGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341865.9
ENST00000356542.5
CDS GCA 72 bp CGGCCGGTGCCACCGTGGGGTAGCCCTGGGCCTCGGTaGGGCTCCCCGACGTACAGGCGCTTCTTTATGAGC +
Preference number: 6 (lower is better)
Translates to: RPVPPWGSPGPR*GSPTYRRFFMS
Trigger: GCTCATAAAGAAGCGCCTGTACGTCGGGGAGCCGCACCGAGGCCCAGGGCTACCCCACGGTGGCACCGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS TCA 72 bp AGCCCCGCTCCACCACCTCCCCAGTCACCGGGTGCCTaGGGAGTTCATCAGTGGGCTGGGCCGAGGCAGGAG +
Preference number: 6 (lower is better)
Translates to: SPAPPPPQSPGA*GVHQWAGPRQE
Trigger: CTCCTGCCTCGGCCCAGCCCACTGATGAACTCCTCAGGCACCCGGTGACTGGGGAGGTGGTGGAGCGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS GCA 72 bp CCTTCTCAGGCAGGCGGGGGCCCTTCTTGCCCTCCTTaGTCTGAGGGGCCACTGTTGGGCCTGGCCTGTGAC +
Preference number: 6 (lower is better)
Translates to: PSQAGGGPSCPP*SEGPLLGLACD
Trigger: GTCACAGGCCAGGCCCAACAGTGGCCCCTCAGAGCAAGGAGGGCAAGAAGGGCCCCCGCCTGCCTGAGAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CAA 90 bp TGGCGGCCCAGATACTGGAGGGCCGGGGCCGGGGGCTCAGGGTCATaGCTGAACTCTGGCGGCGGTGGGATGACCTCGAAGTTGAACTCC +
Preference number: 6 (lower is better)
Translates to: WRPRYWRAGAGGSGS*LNSGGGGMTSKLNS
Trigger: GGAGTTCAACTTCGAGGTCATCCCACCGCCGCCAGAGTTCAGCAATGACCCTGAGCCCCCGGCCCCGGCCCTCCAGTATCTGGGCCGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS GCA 72 bp GGAGAGTCTCCTTCTCAGGCAGGCGGGGGCCCTTCTTaGCCTCCTTGCTCTGAGGGGCCACTGTTGGGCCTG +
Preference number: 6 (lower is better)
Translates to: GESPSQAGGGPS*PPCSEGPLLGL
Trigger: CAGGCCCAACAGTGGCCCCTCAGAGCAAGGAGGGCAAGAAGGGCCCCCGCCTGCCTGAGAAGGAGACTCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 72 bp GGCCTCGGCTTGGTGGCTGTGGTCACGGAGACTTCCTaGCAGAGAGGACCGACCCAGGGCAGCCCCTACAGA +
Preference number: 6 (lower is better)
Translates to: GLGLVAVVTETS*QRGPTQGSPYR
Trigger: TCTGTAGGGGCTGCCCTGGGTCGGTCCTCTCTGCCAGGAAGTCTCCGTGACCACAGCCACCAAGCCGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 72 bp GGCCGGGGCCGGGGGCTCAGGGTCATTGCTGAACTCTaGCGGCGGTGGGATGACCTCGAAGTTGAACTCCTC +
Preference number: 6 (lower is better)
Translates to: GRGRGLRVIAEL*RRWDDLEVELL
Trigger: GAGGAGTTCAACTTCGAGGTCATCCCACCGCCGCCAGAGTTCAGCAATGACCCTGAGCCCCCGGCCCCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS TCA 72 bp ACCCCTGGCTCAGGAGGTGGCTTTCCGATGGGCCCCTaGGCAGACATAGGAGATGGGATGGCGGGTCCCAGG +
Preference number: 6 (lower is better)
Translates to: TPGSGGGFPMGP*ADIGDGMAGPR
Trigger: CCTGGGACCCGCCATCCCATCTCCTATGTCTGCTCAGGGGCCCATCGGAAAGCCACCTCCTGAGCCAGGGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 72 bp AGCTGGGAGGCAGTGGGAGTCGGCTGGGAGCCTTCTTaGTGGCCCCCTCTTCCTTTCGGGGAGCCTCTTGTG +
Preference number: 6 (lower is better)
Translates to: SWEAVGVGWEPS*WPPLPFGEPLV
Trigger: CACAAGAGGCTCCCCGAAAGGAAGAGGGGGCCACCAAGAAGGCTCCCAGCCGACTCCCACTGCCTCCCAGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 72 bp TGGGAGGCAGTGGGAGTCGGCTGGGAGCCTTCTTGGTaGCCCCCTCTTCCTTTCGGGGAGCCTCTTGTGCTT +
Preference number: 6 (lower is better)
Translates to: WEAVGVGWEPSW*PPLPFGEPLVL
Trigger: AAGCACAAGAGGCTCCCCGAAAGGAAGAGGGGGCCACCAAGAAGGCTCCCAGCCGACTCCCACTGCCTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 72 bp GGCACCACAGTGAAGGAGTTGGGCGTGCCCTGGCTGTaGAAGATGCTGTCAGAGCTGGCCTCGGCTTGGTGG +
Preference number: 6 (lower is better)
Translates to: GTTVKELGVPWL*KMLSELASAWW
Trigger: CCACCAAGCCGAGGCCAGCTCTGACAGCATCTTCCACAGCCAGGGCACGCCCAACTCCTTCACTGTGGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CAA 72 bp CAGTCAGCGGAAGGAAGGTCAGCAGGGGCCGGACTCTaGGCCGAGCTTTCAGCGTGGCTGTTCCTGACTCGC +
Preference number: 6 (lower is better)
Translates to: QSAEGRSAGAGL*AELSAWLFLTR
Trigger: GCGAGTCAGGAACAGCCACGCTGAAAGCTCGGCCAAGAGTCCGGCCCCTGCTGACCTTCCTTCCGCTGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS CAA 90 bp CTCCAGCTCATTCCGGATCTGCCGCACACTGGGAGTTGGAGAGTCTaGGGGAATGTAGTCCACAGAGGGCAGGGTCAGGCTGGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: LQLIPDLPHTGSWRV*GNVVHRGQGQAGGS
Trigger: GCTGCCCCCAGCCTGACCCTGCCCTCTGTGGACTACATTCCCCAAGACTCTCCAACTCCCAGTGTGCGGCAGATCCGGAATGAGCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CAA 90 bp AGAGCCGGGCCTCCAGCTCATTCCGGATCTGCCGCACACTGGGAGTaGGAGAGTCTTGGGGAATGTAGTCCACAGAGGGCAGGGTCAGGC +
Preference number: 6 (lower is better)
Translates to: RAGPPAHSGSAAHWE*ESLGECSPQRAGSG
Trigger: GCCTGACCCTGCCCTCTGTGGACTACATTCCCCAAGACTCTCCAACTCCCAGTGTGCGGCAGATCCGGAATGAGCTGGAGGCCCGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CAA 90 bp GGGGCTTGTAGAGACATGGCACCTCTCCTCCACCAGGAGATGTCTTaGGTGGGAAGGCTGCAGATGAGCGGGCTCCCTGTGTGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: GACRDMAPLLHQEMS*VGRLQMSGLPVWAA
Trigger: GGCTGCCCACACAGGGAGCCCGCTCATCTGCAGCCTTCCCACCAAAGACATCTCCTGGTGGAGGAGAGGTGCCATGTCTCTACAAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CAA 90 bp AGCTCTGTGCCCTCTGCGTCTCTTCCCAGCCGCGGCCCCCACTTATaGGGTATTTCGGTCGTCAGCGGGGAGTCCTTCTCAGCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: SSVPSASLPSRGPHL*GISVVSGESFSASL
Trigger: CAAGGAGGCTGAGAAGGACTCCCCGCTGACGACCGAAATACCCAATAAGTGGGGGCCGCGGCTGGGAAGAGACGCAGAGGGCACAGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS TCA 72 bp TCCACCAGGAGATGTCTTTGGTGGGAAGGCTGCAGATaGGCGGGCTCCCTGTGTGGGCAGCCTAGTGGCCTC +
Preference number: 6 (lower is better)
Translates to: STRRCLWWEGCR*AGSLCGQPSGL
Trigger: GAGGCCACTAGGCTGCCCACACAGGGAGCCCGCTCATCTGCAGCCTTCCCACCAAAGACATCTCCTGGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS GCA 72 bp GCTGAGGAGAGCCGGGCCTCCAGCTCATTCCGGATCTaGCGCACACTGGGAGTTGGAGAGTCTTGGGGAATG +
Preference number: 6 (lower is better)
Translates to: AEESRASSSFRI*RTLGVGESWGM
Trigger: CATTCCCCAAGACTCTCCAACTCCCAGTGTGCGGCAGATCCGGAATGAGCTGGAGGCCCGGCTCTCCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 72 bp CTTGCCCTCCTTGCTCTGAGGGGCCACTGTTGGGCCTaGCCTGTGACTGAGGAATCGGTCCTCTCTCCTGGA +
Preference number: 6 (lower is better)
Translates to: LALLALRGHCWA*PVTEESVLSPG
Trigger: TCCAGGAGAGAGGACCGATTCCTCAGTCACAGGCCAGGCCCAACAGTGGCCCCTCAGAGCAAGGAGGGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 72 bp GCCCTTCTTGCCCTCCTTGCTCTGAGGGGCCACTGTTaGGCCTGGCCTGTGACTGAGGAATCGGTCCTCTCT +
Preference number: 6 (lower is better)
Translates to: ALLALLALRGHC*AWPVTEESVLS
Trigger: AGAGAGGACCGATTCCTCAGTCACAGGCCAGGCCCAACAGTGGCCCCTCAGAGCAAGGAGGGCAAGAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 72 bp AAGATGCTGTCAGAGCTGGCCTCGGCTTGGTGGCTGTaGTCACGGAGACTTCCTGGCAGAGAGGACCGACCC +
Preference number: 6 (lower is better)
Translates to: KMLSELASAWWL*SRRLPGREDRP
Trigger: GGGTCGGTCCTCTCTGCCAGGAAGTCTCCGTGACCACAGCCACCAAGCCGAGGCCAGCTCTGACAGCATCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 72 bp CCTCTGCGTCTCTTCCCAGCCGCGGCCCCCACTTATTaGGTATTTCGGTCGTCAGCGGGGAGTCCTTCTCAG +
Preference number: 6 (lower is better)
Translates to: PLRLFPAAAPTY*VFRSSAGSPSQ
Trigger: CTGAGAAGGACTCCCCGCTGACGACCGAAATACCCAATAAGTGGGGGCCGCGGCTGGGAAGAGACGCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 72 bp AGCTACTCTTTCCCAGGCCACAGGGGCCTGGGGCTCTaGCTTTGTCCAGTTGTGCCTGCGGCTCAGCTCTGT +
Preference number: 6 (lower is better)
Translates to: SYSFPGHRGLGL*LCPVVPAAQLC
Trigger: ACAGAGCTGAGCCGCAGGCACAACTGGACAAAGCCAGAGCCCCAGGCCCCTGTGGCCTGGGAAAGAGTAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 72 bp CGGGGGCTCAGGGTCATTGCTGAACTCTGGCGGCGGTaGGATGACCTCGAAGTTGAACTCCTCCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: RGLRVIAELWRR*DDLEVELLLLL
Trigger: GAGGAGGAGGAGGAGTTCAACTTCGAGGTCATCCCACCGCCGCCAGAGTTCAGCAATGACCCTGAGCCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CAA 72 bp CATTCAGCGGAAGGAAGGTCAGCAGGGGCCGGACTCTaGGCCGAGCTTTCAGCGTGGCTGTTCCTGACTCGC +
Preference number: 6 (lower is better)
Translates to: HSAEGRSAGAGL*AELSAWLFLTR
Trigger: GCGAGTCAGGAACAGCCACGCTGAAAGCTCGGCCAAGAGTCCGGCCCCTGCTGACCTTCCTTCCGCTGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CAA 72 bp CCCTCTGCGTCTCTTCCCAGCCGCGGCCCCCACTTATaGGGTATTTCGGTCGTCAGCGGGGAGTCCTTCTCA +
Preference number: 6 (lower is better)
Translates to: PSASLPSRGPHL*GISVVSGESFS
Trigger: TGAGAAGGACTCCCCGCTGACGACCGAAATACCCAATAAGTGGGGGCCGCGGCTGGGAAGAGACGCAGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS TCA 72 bp TGCTCTGAGGGGCCACTGTTGGGCCTGGCCTGTGACTaGGGAATCGGTCCTCTCTCCTGGAGCCACAGAGAT +
Preference number: 6 (lower is better)
Translates to: CSEGPLLGLACD*GIGPLSWSHRD
Trigger: ATCTCTGTGGCTCCAGGAGAGAGGACCGATTCCTCAGTCACAGGCCAGGCCCAACAGTGGCCCCTCAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 72 bp AGATCCAGGGCGGATTGGTGGCGTAGAGGGAGGTGCTaGGGGTCGTGGTGTGCTTCTTCCCGAAGAGTTTGC +
Preference number: 6 (lower is better)
Translates to: RSRADWWRRGRC*GSWCASSRRVC
Trigger: GCAAACTCTTCGGGAAGAAGCACACCACGACCCCCAGCACCTCCCTCTACGCCACCAATCCGCCCTGGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341865.9
ENST00000356542.5
CDS CCA 72 bp TCATCTGGAACCGAGGGGGTGGGCACAGCCAGCCCATaGTTTTCCTGGGCATTCAGCGGAAGGAAGGTCAGC +
Preference number: 6 (lower is better)
Translates to: SSGTEGVGTASP*FSWAFSGRKVS
Trigger: GCTGACCTTCCTTCCGCTGAATGCCCAGGAAAACCATGGGCTGGCTGTGCCCACCCCCTCGGTTCCAGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 72 bp GCCGGGCCTCCAGCTCATTCCGGATCTGCCGCACACTaGGAGTTGGAGAGTCTTGGGGAATGTAGTCCACAG +
Preference number: 6 (lower is better)
Translates to: AGPPAHSGSAAH*ELESLGECSPQ
Trigger: CTGTGGACTACATTCCCCAAGACTCTCCAACTCCCAGTGTGCGGCAGATCCGGAATGAGCTGGAGGCCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 72 bp CTGTGGAAGATGCTGTCAGAGCTGGCCTCGGCTTGGTaGCTGTGGTCACGGAGACTTCCTGGCAGAGAGGAC +
Preference number: 6 (lower is better)
Translates to: LWKMLSELASAW*LWSRRLPGRED
Trigger: GTCCTCTCTGCCAGGAAGTCTCCGTGACCACAGCCACCAAGCCGAGGCCAGCTCTGACAGCATCTTCCACAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 72 bp TGGCTGTGGAAGATGCTGTCAGAGCTGGCCTCGGCTTaGTGGCTGTGGTCACGGAGACTTCCTGGCAGAGAG +
Preference number: 6 (lower is better)
Translates to: WLWKMLSELASA*WLWSRRLPGRE
Trigger: CTCTCTGCCAGGAAGTCTCCGTGACCACAGCCACCAAGCCGAGGCCAGCTCTGACAGCATCTTCCACAGCCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 72 bp AACTTGGGCACCACAGTGAAGGAGTTGGGCGTGCCCTaGCTGTGGAAGATGCTGTCAGAGCTGGCCTCGGCT +
Preference number: 6 (lower is better)
Translates to: NLGTTVKELGVP*LWKMLSELASA
Trigger: AGCCGAGGCCAGCTCTGACAGCATCTTCCACAGCCAGGGCACGCCCAACTCCTTCACTGTGGTGCCCAAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CAA 90 bp TTTCCTGGGCATTCAGCGGAAGGAAGGTCAGCAGGGGCCGGACTCTaGGCCGAGCTTTCAGCGTGGCTGTTCCTGACTCGCTCACTGTGT +
Preference number: 6 (lower is better)
Translates to: FPGHSAEGRSAGAGL*AELSAWLFLTRSLC
Trigger: ACACAGTGAGCGAGTCAGGAACAGCCACGCTGAAAGCTCGGCCAAGAGTCCGGCCCCTGCTGACCTTCCTTCCGCTGAATGCCCAGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CAA 90 bp TCCTTCTCAGCCTCCTTGGGTAACTTGGGCACCACAGTGAAGGAGTaGGGCGTGCCCTGGCTGTGGAAGATGCTGTCAGAGCTGGCCTCG +
Preference number: 6 (lower is better)
Translates to: SFSASLGNLGTTVKE*GVPWLWKMLSELAS
Trigger: CGAGGCCAGCTCTGACAGCATCTTCCACAGCCAGGGCACGCCCAACTCCTTCACTGTGGTGCCCAAGTTACCCAAGGAGGCTGAGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CAA 90 bp GGTGGGATGACCTCGAAGTTGAACTCCTCCTCCTCCTCCTCCCTCTaGTTCGAAGGAGAAGGTGGGGAGGAGAAGGACTTGGGCAGCGGG +
Preference number: 6 (lower is better)
Translates to: GGMTSKLNSSSSSSL*FEGEGGEEKDLGSG
Trigger: CCCGCTGCCCAAGTCCTTCTCCTCCCCACCTTCTCCTTCGAACAAGAGGGAGGAGGAGGAGGAGGAGTTCAACTTCGAGGTCATCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS GCA 72 bp CTTGGTGGCCCCCTCTTCCTTTCGGGGAGCCTCTTGTaGTTCCTGAACTGGGATGGACGAAGTCCTGACTGG +
Preference number: 6 (lower is better)
Translates to: LGGPLFLSGSLL*FLNWDGRSPDW
Trigger: CCAGTCAGGACTTCGTCCATCCCAGTTCAGGAAGCACAAGAGGCTCCCCGAAAGGAAGAGGGGGCCACCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS GCA 72 bp GAATCGGTCCTCTCTCCTGGAGCCACAGAGATAGGCTaGCAGCTCGTTCCGCAGCTTTTCCATCTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: ESVLSPGATEIG*QLVPQLFHLAG
Trigger: CCCAGCCAGATGGAAAAGCTGCGGAACGAGCTGGCAGCCTATCTCTGTGGCTCCAGGAGAGAGGACCGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 72 bp CAGGCTGCTGCCGCCAAGACTCTTTTCAGGAACACCTaGGGGAGTGTCCTTTGCTGGCAGGCTCAGGAGAGT +
Preference number: 6 (lower is better)
Translates to: QAAAAKTLFRNT*GSVLCWQAQES
Trigger: ACTCTCCTGAGCCTGCCAGCAAAGGACACTCCCCCAGGTGTTCCTGAAAAGAGTCTTGGCGGCAGCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CAA 90 bp GGCCAAAGTGTAGCCTTGGGTGGTATGGCTGGCTCAGGTGTGGCCTaGGGTGGTATGGCTGGTCCCAACATAGCCTTGGGCTGGAGTGAT +
Preference number: 6 (lower is better)
Translates to: GQSVALGGMAGSGVA*GGMAGPNIALGWSD
Trigger: ATCACTCCAGCCCAAGGCTATGTTGGGACCAGCCATACCACCCAAGGCCACACCTGAGCCAGCCATACCACCCAAGGCTACACTTTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CAA 90 bp TTATTGGGTATTTCGGTCGTCAGCGGGGAGTCCTTCTCAGCCTCCTaGGGTAACTTGGGCACCACAGTGAAGGAGTTGGGCGTGCCCTGG +
Preference number: 6 (lower is better)
Translates to: LLGISVVSGESFSAS*GNLGTTVKELGVPW
Trigger: CCAGGGCACGCCCAACTCCTTCACTGTGGTGCCCAAGTTACCCAAGGAGGCTGAGAAGGACTCCCCGCTGACGACCGAAATACCCAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CAA 90 bp AATGAAACTCAGTCAGCGGAAGGAAGGTCAGCAGGGGCCGGACTCTaGGCCGAGCTTTCAGCGTGGCTGTTCCTGACTCGCTCACTGTGT +
Preference number: 6 (lower is better)
Translates to: NETQSAEGRSAGAGL*AELSAWLFLTRSLC
Trigger: ACACAGTGAGCGAGTCAGGAACAGCCACGCTGAAAGCTCGGCCAAGAGTCCGGCCCCTGCTGACCTTCCTTCCGCTGACTGAGTTTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356542.5
CDS TCA 72 bp GGTGGCCTCTGCCTGCCTGCCATTCAGTGCTACATCTaGTTTCCACTTGGTGACACCCCCAGGGGGAAAGAG +
Preference number: 6 (lower is better)
Translates to: GGLCLPAIQCYI*FPLGDTPRGKE
Trigger: CTCTTTCCCCCTGGGGGTGTCACCAAGTGGAAATCAGATGTAGCACTGAATGGCAGGCAGGCAGAGGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 72 bp ACTCTTTTCAGGAACACCTGGGGGAGTGTCCTTTGCTaGCAGGCTCAGGAGAGTCTCCTTCTCAGGCAGGCG +
Preference number: 6 (lower is better)
Translates to: TLFRNTWGSVLC*QAQESLLLRQA
Trigger: CGCCTGCCTGAGAAGGAGACTCTCCTGAGCCTGCCAGCAAAGGACACTCCCCCAGGTGTTCCTGAAAAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 72 bp CTCCAGCTCATTCCGGATCTGCCGCACACTGGGAGTTaGAGAGTCTTGGGGAATGTAGTCCACAGAGGGCAG +
Preference number: 6 (lower is better)
Translates to: LQLIPDLPHTGS*RVLGNVVHRGQ
Trigger: CTGCCCTCTGTGGACTACATTCCCCAAGACTCTCCAACTCCCAGTGTGCGGCAGATCCGGAATGAGCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CAA 72 bp GCCTGCCTGCCATTCAGTGCTACATCTGATTTCCACTaGGTGACACCCCCAGGGGGAAAGAGACGAGTCCCC +
Preference number: 6 (lower is better)
Translates to: ACLPFSATSDFH*VTPPGGKRRVP
Trigger: GGGGACTCGTCTCTTTCCCCCTGGGGGTGTCACCAAGTGGAAATCAGATGTAGCACTGAATGGCAGGCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CAA 72 bp CTTCTTGGTGGCCCCCTCTTCCTTTCGGGGAGCCTCTaGTGCTTCCTGAACTGGGATGGACGAAGTCCTGAC +
Preference number: 6 (lower is better)
Translates to: LLGGPLFLSGSL*CFLNWDGRSPD
Trigger: GTCAGGACTTCGTCCATCCCAGTTCAGGAAGCACAAGAGGCTCCCCGAAAGGAAGAGGGGGCCACCAAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CAA 72 bp CCTCCAGCTCATTCCGGATCTGCCGCACACTGGGAGTaGGAGAGTCTTGGGGAATGTAGTCCACAGAGGGCA +
Preference number: 6 (lower is better)
Translates to: PPAHSGSAAHWE*ESLGECSPQRA
Trigger: TGCCCTCTGTGGACTACATTCCCCAAGACTCTCCAACTCCCAGTGTGCGGCAGATCCGGAATGAGCTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CAA 72 bp ATTTCGGTCGTCAGCGGGGAGTCCTTCTCAGCCTCCTaGGGTAACTTGGGCACCACAGTGAAGGAGTTGGGC +
Preference number: 6 (lower is better)
Translates to: ISVVSGESFSAS*GNLGTTVKELG
Trigger: GCCCAACTCCTTCACTGTGGTGCCCAAGTTACCCAAGGAGGCTGAGAAGGACTCCCCGCTGACGACCGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CAA 90 bp TCAGGGTCATTGCTGAACTCTGGCGGCGGTGGGATGACCTCGAAGTaGAACTCCTCCTCCTCCTCCTCCCTCTTGTTCGAAGGAGAAGGT +
Preference number: 6 (lower is better)
Translates to: SGSLLNSGGGGMTSK*NSSSSSSLLFEGEG
Trigger: ACCTTCTCCTTCGAACAAGAGGGAGGAGGAGGAGGAGGAGTTCAACTTCGAGGTCATCCCACCGCCGCCAGAGTTCAGCAATGACCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS TCA 72 bp GGCTGGAGTGATGTAGTTGGCAGCAGGGTGGTGGATTaGGGTGGCAGATTCTTGGCCACAGGCTTGGAGAGT +
Preference number: 6 (lower is better)
Translates to: GWSDVVGSRVVD*GGRFLATGLES
Trigger: ACTCTCCAAGCCTGTGGCCAAGAATCTGCCACCTCAATCCACCACCCTGCTGCCAACTACATCACTCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CAA 72 bp GTGCTGGGGGTCGTGGTGTGCTTCTTCCCGAAGAGTTaGCTGAAGGTGCCCTGCACCGTCTGCTTCTTTTTC +
Preference number: 6 (lower is better)
Translates to: VLGVVVCFFPKS*LKVPCTVCFFF
Trigger: GAAAAAGAAGCAGACGGTGCAGGGCACCTTCAGCAAACTCTTCGGGAAGAAGCACACCACGACCCCCAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341865.9
ENST00000356542.5
CDS CAA 72 bp TTGCTGAACTCTGGCGGCGGTGGGATGACCTCGAAGTaGAACTCCTCCTCCTCCTCCTCCCTCTTGTTCGAA +
Preference number: 6 (lower is better)
Translates to: LLNSGGGGMTSK*NSSSSSSLLFE
Trigger: TTCGAACAAGAGGGAGGAGGAGGAGGAGGAGTTCAACTTCGAGGTCATCCCACCGCCGCCAGAGTTCAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS TCA 72 bp TGGGGGTCGTGGTGTGCTTCTTCCCGAAGAGTTTGCTaGAGGTGCCCTGCACCGTCTGCTTCTTTTTCATGC +
Preference number: 6 (lower is better)
Translates to: WGSWCASSRRVC*RCPAPSASFSC
Trigger: GCATGAAAAAGAAGCAGACGGTGCAGGGCACCTTCAGCAAACTCTTCGGGAAGAAGCACACCACGACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341865.9
ENST00000356542.5
CDS GCA 72 bp AAGACTCTTTTCAGGAACACCTGGGGGAGTGTCCTTTaGTGGCAGGCTCAGGAGAGTCTCCTTCTCAGGCAG +
Preference number: 6 (lower is better)
Translates to: KTLFRNTWGSVL*WQAQESLLLRQ
Trigger: CTGCCTGAGAAGGAGACTCTCCTGAGCCTGCCAGCAAAGGACACTCCCCCAGGTGTTCCTGAAAAGAGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 72 bp TTGTGCTTCCTGAACTGGGATGGACGAAGTCCTGACTaGGGTTGGGGGAGGCACTTTGAAAGAACGGGGGAA +
Preference number: 6 (lower is better)
Translates to: LCFLNWDGRSPD*GWGRHFERTGE
Trigger: TTCCCCCGTTCTTTCAAAGTGCCTCCCCCAACCCCAGTCAGGACTTCGTCCATCCCAGTTCAGGAAGCACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CAA 72 bp GGCCTCAGGTCACCCACAGAGCTGTACAGTCGGAGGTaGCCATTGACTAGTGAGCTGGTACCTGTCACTTCT +
Preference number: 6 (lower is better)
Translates to: GLRSPTELYSRR*PLTSELVPVTS
Trigger: AGAAGTGACAGGTACCAGCTCACTAGTCAATGGCAACCTCCGACTGTACAGCTCTGTGGGTGACCTGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CAA 72 bp CAAGACTCTTTTCAGGAACACCTGGGGGAGTGTCCTTaGCTGGCAGGCTCAGGAGAGTCTCCTTCTCAGGCA +
Preference number: 6 (lower is better)
Translates to: QDSFQEHLGECP*LAGSGESPSQA
Trigger: TGCCTGAGAAGGAGACTCTCCTGAGCCTGCCAGCAAAGGACACTCCCCCAGGTGTTCCTGAAAAGAGTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS TCA 72 bp CCGGACTCTTGGCCGAGCTTTCAGCGTGGCTGTTCCTaGCTCGCTCACTGTGTTAAACCGATTGTCTCCATA +
Preference number: 6 (lower is better)
Translates to: PDSWPSFQRGCS*LAHCVKPIVSI
Trigger: TATGGAGACAATCGGTTTAACACAGTGAGCGAGTCAGGAACAGCCACGCTGAAAGCTCGGCCAAGAGTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341865.9
ENST00000356542.5
CDS TCA 72 bp GGTCACCCACAGAGCTGTACAGTCGGAGGTTGCCATTaGCTAGTGAGCTGGTACCTGTCACTTCTTTGTCTG +
Preference number: 6 (lower is better)
Translates to: GHPQSCTVGGCH*LVSWYLSLLCL
Trigger: CAGACAAAGAAGTGACAGGTACCAGCTCACTAGTCAATGGCAACCTCCGACTGTACAGCTCTGTGGGTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CAA 90 bp TATTGTCCAGGCCTCAGGTCACCCACAGAGCTGTACAGTCGGAGGTaGCCATTGACTAGTGAGCTGGTACCTGTCACTTCTTTGTCTGCA +
Preference number: 6 (lower is better)
Translates to: YCPGLRSPTELYSRR*PLTSELVPVTSLSA
Trigger: TGCAGACAAAGAAGTGACAGGTACCAGCTCACTAGTCAATGGCAACCTCCGACTGTACAGCTCTGTGGGTGACCTGAGGCCTGGACAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341865.9
CDS CCA 72 bp GAAACAAGTGCCCAGATCCTTAAAGACACAGTTTGTTaGAGTAGAGCTAAGAGAACCCCTGGCTCAGGAGGT +
Preference number: 6 (lower is better)
Translates to: ETSAQILKDTVC*SRAKRTPGSGG
Trigger: ACCTCCTGAGCCAGGGGTTCTCTTAGCTCTACTCCAACAAACTGTGTCTTTAAGGATCTGGGCACTTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341865.9