RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C6 (Homo sapiens)

Ensembl gene IDs: ENSG00000039537

Ensembl transcript IDs: ENST00000263413.7, ENST00000337836.10, ENST00000417809.1, ENST00000433294.1, ENST00000461473.1, ENST00000473450.1, ENST00000475349.5, ENST00000511470.1

Found 369 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGTTGGTACCTAGGGGTATGCTACAGGGCGTCATGAGCTGGAACTaGATAAGACATGCCCAAACAGGAGAGTCAGGGGAGAATAATGAT +
Preference number: 1 (lower is better)
Translates to: KLVPRGMLQGVMSWN*IRHAQTGESGENND
Trigger: ATCATTATTCTCCCCTGACTCTCCTGTTTGGGCATGTCTTATTCAGTTCCAGCTCATGACGCCCTGTAGCATACCCCTAGGTACCAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
3UTR-3UTR CCA 90 bp ATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGACTGCTGTGGAAGTTaGTACCTAGGGGTATGCTAC +
Preference number: 2 (lower is better)
Translates to: MKAKAFVCFIICRVLRTLDCCGS*YLGVCY
Trigger: GTAGCATACCCCTAGGTACCAACTTCCACAGCAGTC...CAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
3UTR-3UTR CCA 90 bp AAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCTTTACGAGACTGCTGTaGAAGTTGGTACCTAGGGGT +
Preference number: 2 (lower is better)
Translates to: KAKAFVCFIICRVLRTLVFTRLL*KLVPRG
Trigger: ACCCCTAGGTACCAACTTCCACAGCAGTCTCGTAAA...GACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
3UTR-3UTR GCA 90 bp CTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATCCTGTGAACTGAATAAGACATaGCCAAACAGGAGAGTCAGG +
Preference number: 2 (lower is better)
Translates to: LFYYLPSSQDFGQYLTSCELNKT*PNRRVR
Trigger: CCTGACTCTCCTGTTTGGGCATGTCTTATTCAGTTC...ACAGGATGTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
3UTR-3UTR GCA 90 bp TCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATCCTGGAACTGAATAAGACATaGCCAAACAGGAGAGTCAGG +
Preference number: 2 (lower is better)
Translates to: SVLLSAEFSGLWSVLDILELNKT*PNRRVR
Trigger: CCTGACTCTCCTGTTTGGGCATGTCTTATTCAGTTC...CAGGATGTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
3UTR-3UTR TCA 90 bp TTTGTGTGTCTACCCCTGAATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTGTCATGAGCTGGAACTaGATAAGACATGCCCAAACA +
Preference number: 2 (lower is better)
Translates to: FVCLPLNECMLHEGKGFCVMSWN*IRHAQT
Trigger: TGTTTGGGCATGTCTTATTCAGTTCCAGCTCATGAC...ACAAAAGCCTTTGCCTTCATGAAGCATACATTCATTCAGGGGTAGACACACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
3UTR-3UTR GCA 90 bp CTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATCCTGTTTGAGCATGCCAGTCTaGTGTTTGTGCAAGAATTCT +
Preference number: 2 (lower is better)
Translates to: LFYYLPSSQDFGQYLTSCLSMPV*CLCKNS
Trigger: AGAATTCTTGCACAAACAGCAGACTGGCATGCTCAA...ACAGGATGTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
3UTR-3UTR GCA 90 bp TTTGTGTGTCTACCCCTGAATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTTTGAGCATGCCAGTCTaGTGTTTGTGCAAGAATTCT +
Preference number: 2 (lower is better)
Translates to: FVCLPLNECMLHEGKGFCLSMPV*CLCKNS
Trigger: AGAATTCTTGCACAAACAGCAGACTGGCATGCTCAA...ACAAAAGCCTTTGCCTTCATGAAGCATACATTCATTCAGGGGTAGACACACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
3UTR-3UTR GCA 90 bp ATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGAGAATTTACGAGACTaGTGTGGAAGTTGGTACCTA +
Preference number: 2 (lower is better)
Translates to: MKAKAFVCFIICRVLRTLENLRD*CGSWYL
Trigger: TAGGTACCAACTTCCACAGCAGTCTCGTAAATTCTC...CAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
3UTR CAA 90 bp CTTAATGTCACAGGCTACATAAGGGCCTCAGAAGTCACATTATTTTaGTACAATGTGAACAGGAGAATTTACGAGACTGCTGTGGAAGTT +
Preference number: 2 (lower is better)
Translates to: LNVTGYIRASEVTLF*YNVNRRIYETAVEV
Trigger: AACTTCCACAGCAGTCTCGTAAATTCTCCTGTTCACATTGTACAAAAATAATGTGACTTCTGAGGCCCTTATGTAGCCTGTGACATTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
3UTR-3UTR TCA 90 bp ATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTCATGAGCTGGAACTaGATAAGACATGCCCAAACA +
Preference number: 2 (lower is better)
Translates to: MNVCFMKAKAFVCFIICRVMSWN*IRHAQT
Trigger: TGTTTGGGCATGTCTTATTCAGTTCCAGCTCATGAC...TCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACATTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
3UTR-3UTR CCA 90 bp ATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTGTTTATCTCATTTGTAGGAGTTaGTTCTTCGGGATGGTAAAT +
Preference number: 2 (lower is better)
Translates to: MKAGLQECVSEVLEISVYLICRS*FFGMVN
Trigger: ATTTACCATCCCGAAGAACCAACTCCTACAAATGAG...ATAAACAGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
3UTR-3UTR CCA 90 bp TCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATCCTGGTGTTTCAGAGGTTCTaGAGATTTCTGTTTATTAAC +
Preference number: 2 (lower is better)
Translates to: SVLLSAEFSGLWSVLDILVFQRF*RFLFIN
Trigger: GTTAATAAACAGAAATCTCCAGAACCTCTGAAACAC...CAGGATGTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
3UTR CAA 90 bp TCCTTGCATAAGATGATAATTAAGGATGGGACTCACCCTTCCGTGTaGTATTTTCTCCAAAACAATTATCACCATCAAACATGCTACATA +
Preference number: 2 (lower is better)
Translates to: SLHKMIIKDGTHPSV*YFLQNNYHHQTCYI
Trigger: TATGTAGCATGTTTGATGGTGATAATTGTTTTGGAGAAAATACAACACGGAAGGGTGAGTCCCATCCTTAATTATCATCTTATGCAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337836.10
3UTR-3UTR CCA 90 bp AGAAGTCACATTATTTTTGTACAATGTGAACAGGAGAATTTACGAGACTGCTGTCTCATTTGTAGGAGTTaGTTCTTCGGGATGGTAAAT +
Preference number: 2 (lower is better)
Translates to: RSHIIFVQCEQENLRDCCLICRS*FFGMVN
Trigger: ATTTACCATCCCGAAGAACCAACTCCTACAAATGAG...ACAGCAGTCTCGTAAATTCTCCTGTTCACATTGTACAAAAATAATGTGACTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
3UTR-3UTR CAA 90 bp TTGAATGAAGATATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGAGACTGCTGTGGAAGTaGGTACCTAGGGGTATGCTA +
Preference number: 3 (lower is better)
Translates to: LNEDMKAGLQECVSEVLERLLWK*VPRGML
Trigger: TAGCATACCCCTAGGTACCAACTTCCACAGCAGTCT...CTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCATATCTTCATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
3UTR GCA 72 bp ATTTTTGTACAATGTGAACAGGAGAATTTACGAGACTaGTGTGGAAGTTGGTACCTAGGGGTATGCTACAGG +
Preference number: 3 (lower is better)
Translates to: IFVQCEQENLRD*CGSWYLGVCYR
Trigger: CCTGTAGCATACCCCTAGGTACCAACTTCCACAGCAGTCTCGTAAATTCTCCTGTTCACATTGTACAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
3UTR-3UTR CAA 90 bp AAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCATGCCAGTCTGCTGTTaGTGCAAGAATTCTCATTTG +
Preference number: 3 (lower is better)
Translates to: KAKAFVCFIICRVLRTLVMPVCC*CKNSHL
Trigger: CAAATGAGAATTCTTGCACAAACAGCAGACTGGCAT...GACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
3UTR-3UTR CAA 90 bp CTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACTTTTTGTCAGTAACTTaGAGCATGCCAGTCTGCTGT +
Preference number: 3 (lower is better)
Translates to: LLSVLLSAEFSGLWSVLDFLSVT*SMPVCC
Trigger: ACAGCAGACTGGCATGCTCAAAGTTACTGACAAAAA...GTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp GGGTATGCTACAGGGCGTCATGAGCTGGAACTGAATAAGACATGCCCAAACAGGCCTGCACAACTGGCTTaGTGCACTCCGTCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: GYATGRHELELNKTCPNRPAQLA*CTPSVG
Trigger: GCCAACGGACGGAGTGCATCAAGCCAGTTGTGCAGG...CCTGTTTGGGCATGTCTTATTCAGTTCCAGCTCATGACGCCCTGTAGCATACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp ACGAGACTGCTGTGGAAGTTGGTACCTAGGGGTATGCTACAGGGCGTCATGAGCGAGCATTCAGCAGGATaGAGTACAAGACAGAGCGTC +
Preference number: 4 (lower is better)
Translates to: TRLLWKLVPRGMLQGVMSEHSAG*STRQSV
Trigger: GACGCTCTGTCTTGTACTTCATCCTGCTGAATGCTC...GCTCATGACGCCCTGTAGCATACCCCTAGGTACCAACTTCCACAGCAGTCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp ACAGGAGAATTTACGAGACTGCTGTGGAAGTTGGTACCTAGGGGTATGCTACAGCAGACATTCAGTCCCTaGGAGGGTGGGTCGGCCATT +
Preference number: 4 (lower is better)
Translates to: TGEFTRLLWKLVPRGMLQQTFSP*EGGSAI
Trigger: AATGGCCGACCCACCCTCTCAGGGACTGAATGTCTG...CTGTAGCATACCCCTAGGTACCAACTTCCACAGCAGTCTCGTAAATTCTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp GGGTATGCTACAGGGCGTCATGAGCTGGAACTGAATAAGACATGCCCAAACAGGCTAACTTTCTGGCAATaGAGCGGCCACTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: GYATGRHELELNKTCPNRLTFWQ*SGHCHS
Trigger: GCTGTGACAGTGGCCGCTGCATTGCCAGAAAGTTAG...CCTGTTTGGGCATGTCTTATTCAGTTCCAGCTCATGACGCCCTGTAGCATACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp ACGAGACTGCTGTGGAAGTTGGTACCTAGGGGTATGCTACAGGGCGTCATGAGCCTGACAGCTTGTTGGTaGTGCACCTATGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: TRLLWKLVPRGMLQGVMSLTACW*CTYVPL
Trigger: AAGTGGAACATAGGTGCACCACCAACAAGCTGTCAG...GCTCATGACGCCCTGTAGCATACCCCTAGGTACCAACTTCCACAGCAGTCTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp ACGAGACTGCTGTGGAAGTTGGTACCTAGGGGTATGCTACAGGGCGTCATGAGCAAGTTTTTGAGCAGCTaGTCCACTGAGTCCATGCAT +
Preference number: 4 (lower is better)
Translates to: TRLLWKLVPRGMLQGVMSKFLSS*STESMH
Trigger: ATGCATGGACTCAGTGGACCAGCTGCTCAAAAACTT...GCTCATGACGCCCTGTAGCATACCCCTAGGTACCAACTTCCACAGCAGTCTCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp GGGTATGCTACAGGGCGTCATGAGCTGGAACTGAATAAGACATGCCCAAACAGGAACTGGCGGCCGTCTTaGCAGGAACCAATATGTAGA +
Preference number: 4 (lower is better)
Translates to: GYATGRHELELNKTCPNRNWRPS*QEPICR
Trigger: TCTACATATTGGTTCCTGCCAAGACGGCCGCCAGTT...CCTGTTTGGGCATGTCTTATTCAGTTCCAGCTCATGACGCCCTGTAGCATACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp ACGAGACTGCTGTGGAAGTTGGTACCTAGGGGTATGCTACAGGGCGTCATGAGCTTTGGAAGTGGAGGCTaGACATTTTTCCCAGTCATA +
Preference number: 4 (lower is better)
Translates to: TRLLWKLVPRGMLQGVMSFGSGG*TFFPVI
Trigger: TATGACTGGGAAAAATGTTCAGCCTCCACTTCCAAA...GCTCATGACGCCCTGTAGCATACCCCTAGGTACCAACTTCCACAGCAGTCTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp TGTGCAAGAATTCTCATTTGTAGGAGTTGGTTCTTCGGGATGGTAAATCTGTTCCAGAGCGTCTGGCCATaGCTTGAGAGCCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: CARILICRSWFFGMVNLFQSVWP*LESLQA
Trigger: GGCCTGGAGGCTCTCAAGGCATGGCCAGACGCTCTG...GAACAGATTTACCATCCCGAAGAACCAACTCCTACAAATGAGAATTCTTGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp ACGAGACTGCTGTGGAAGTTGGTACCTAGGGGTATGCTACAGGGCGTCATGAGCCATTCTCTAGTCTCCTaGTTGCTGCAAATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: TRLLWKLVPRGMLQGVMSHSLVS*LLQICS
Trigger: TGAACAGATTTGCAGCAAGCAGGAGACTAGAGAATG...GCTCATGACGCCCTGTAGCATACCCCTAGGTACCAACTTCCACAGCAGTCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp GGGTATGCTACAGGGCGTCATGAGCTGGAACTGAATAAGACATGCCCAAACAGGGGCAAGGATCGAACTTaGCTGCATACTCTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: GYATGRHELELNKTCPNRGKDRT*LHTLAK
Trigger: CTTTGCAAGAGTATGCAGCCAAGTTCGATCCTTGCC...CCTGTTTGGGCATGTCTTATTCAGTTCCAGCTCATGACGCCCTGTAGCATACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp ACAGGAGAATTTACGAGACTGCTGTGGAAGTTGGTACCTAGGGGTATGCTACAGGAGCATTCAGCAGGATaGAGTACAAGACAGAGCGTC +
Preference number: 4 (lower is better)
Translates to: TGEFTRLLWKLVPRGMLQEHSAG*STRQSV
Trigger: GACGCTCTGTCTTGTACTTCATCCTGCTGAATGCTC...CTGTAGCATACCCCTAGGTACCAACTTCCACAGCAGTCTCGTAAATTCTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp GGGTATGCTACAGGGCGTCATGAGCTGGAACTGAATAAGACATGCCCAAACAGGGTCATGAGCTGGAACTaGATAAGACATGCCCAAACA +
Preference number: 4 (lower is better)
Translates to: GYATGRHELELNKTCPNRVMSWN*IRHAQT
Trigger: TGTTTGGGCATGTCTTATTCAGTTCCAGCTCATGAC...CCTGTTTGGGCATGTCTTATTCAGTTCCAGCTCATGACGCCCTGTAGCATACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp AGAATTCTCATTTGTAGGAGTTGGTTCTTCGGGATGGTAAATCTGTTCATTGTGCAGAGCGTCTGGCCATaGCTTGAGAGCCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: RILICRSWFFGMVNLFIVQSVWP*LESLQA
Trigger: GGCCTGGAGGCTCTCAAGGCATGGCCAGACGCTCTG...CACAATGAACAGATTTACCATCCCGAAGAACCAACTCCTACAAATGAGAATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp ACGAGACTGCTGTGGAAGTTGGTACCTAGGGGTATGCTACAGGGCGTCATGAGCCTCATTTGTAGGAGTTaGTTCTTCGGGATGGTAAAT +
Preference number: 4 (lower is better)
Translates to: TRLLWKLVPRGMLQGVMSLICRS*FFGMVN
Trigger: ATTTACCATCCCGAAGAACCAACTCCTACAAATGAG...GCTCATGACGCCCTGTAGCATACCCCTAGGTACCAACTTCCACAGCAGTCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp AAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACCTCCCAGGAGGCAGTTaGTGGGGCATCTTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: KGFCLFYYLPSSQDFGQYLPGGS*WGIFAS
Trigger: ACTGGCAAAGATGCCCCATCAACTGCCTCCTGGGAG...GTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp AAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACGGCTGTCCCCCAAACTaGCTGGGACGCAAGACAGAT +
Preference number: 4 (lower is better)
Translates to: KGFCLFYYLPSSQDFGQYGCPPN*LGRKTD
Trigger: ATCTGTCTTGCGTCCCAGTCAGTTTGGGGGACAGCC...GTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp ACGAGACTGCTGTGGAAGTTGGTACCTAGGGGTATGCTACAGGGCGTCATGAGCTTGTCCTACTGCTTTTaGCAGTTTTACATATTCCTC +
Preference number: 4 (lower is better)
Translates to: TRLLWKLVPRGMLQGVMSLSYCF*QFYIFL
Trigger: GAGGAATATGTAAAACTGTCAAAAGCAGTAGGACAA...GCTCATGACGCCCTGTAGCATACCCCTAGGTACCAACTTCCACAGCAGTCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp ATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGCAGACATTCAGTCCCTaGGAGGGTGGGTCGGCCATT +
Preference number: 4 (lower is better)
Translates to: MKAKAFVCFIICRVLRTLQTFSP*EGGSAI
Trigger: AATGGCCGACCCACCCTCTCAGGGACTGAATGTCTG...CAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp CATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTTCTGGAGGAACTGGCTaGGGACACCCGGAATCTGCT +
Preference number: 4 (lower is better)
Translates to: HEGKGFCLFYYLPSSQDFSGGTG*GHPESA
Trigger: AGCAGATTCCGGGTGTCCTCAGCCAGTTCCTCCAGA...AAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp GAAGATATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTTCTGGAGGAACTGGCTaGGGACACCCGGAATCTGCT +
Preference number: 4 (lower is better)
Translates to: EDMKAGLQECVSEVLEISSGGTG*GHPESA
Trigger: AGCAGATTCCGGGTGTCCTCAGCCAGTTCCTCCAGA...AGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCATATCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp TGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCCTGCACAACTGGCTTaGTGCACTCCGTCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: CMLHEGKGFCLFYYLPSSPAQLA*CTPSVG
Trigger: GCCAACGGACGGAGTGCATCAAGCCAGTTGTGCAGG...AGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp GGGTATGCTACAGGGCGTCATGAGCTGGAACTGAATAAGACATGCCCAAACAGGCAGAGATCTTCTGAATaGTGGCTACAGTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GYATGRHELELNKTCPNRQRSSE*WLQSSS
Trigger: AGAAGAAGACTGTAGCCATCATTCAGAAGATCTCTG...CCTGTTTGGGCATGTCTTATTCAGTTCCAGCTCATGACGCCCTGTAGCATACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp TTGGTTCTTCGGGATGGTAAATCTGTTCATTGTGCTGGGCCTAGCAGTAATTGTGTTGGTTTCCACCCTTaGAGCACTGTGGGGGCAATA +
Preference number: 4 (lower is better)
Translates to: LVLRDGKSVHCAGPSSNCVGFHP*STVGAI
Trigger: TATTGCCCCCACAGTGCTTCAAGGGTGGAAACCAAC...ACAATTACTGCTAGGCCCAGCACAATGAACAGATTTACCATCCCGAAGAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp ACAGGAGAATTTACGAGACTGCTGTGGAAGTTGGTACCTAGGGGTATGCTACAGGGTCCACTGAGTCCATaGATAGTGATCACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: TGEFTRLLWKLVPRGMLQGPLSP*IVITEA
Trigger: TGCTTCTGTGATCACTATGCATGGACTCAGTGGACC...CTGTAGCATACCCCTAGGTACCAACTTCCACAGCAGTCTCGTAAATTCTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp GGGTATGCTACAGGGCGTCATGAGCTGGAACTGAATAAGACATGCCCAAACAGGTTGATGGGGCATCTTTaGCAGTTACATTCTCTAGTC +
Preference number: 4 (lower is better)
Translates to: GYATGRHELELNKTCPNRLMGHL*QLHSLV
Trigger: GACTAGAGAATGTAACTGGCAAAGATGCCCCATCAA...CCTGTTTGGGCATGTCTTATTCAGTTCCAGCTCATGACGCCCTGTAGCATACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp TTGGTTCTTCGGGATGGTAAATCTGTTCATTGTGCTGGGCCTAGCAGTAATTGTCTAACTTTCTGGCAATaGAGCGGCCACTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: LVLRDGKSVHCAGPSSNCLTFWQ*SGHCHS
Trigger: GCTGTGACAGTGGCCGCTGCATTGCCAGAAAGTTAG...ACAATTACTGCTAGGCCCAGCACAATGAACAGATTTACCATCCCGAAGAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp ACGAGACTGCTGTGGAAGTTGGTACCTAGGGGTATGCTACAGGGCGTCATGAGCAAGACATCAGAAAGGTaGAGATCTTTAGCTTTCGTT +
Preference number: 4 (lower is better)
Translates to: TRLLWKLVPRGMLQGVMSKTSER*RSLAFV
Trigger: AACGAAAGCTAAAGATCTGCACCTTTCTGATGTCTT...GCTCATGACGCCCTGTAGCATACCCCTAGGTACCAACTTCCACAGCAGTCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp ATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGCAGAGGCGCAGTGCATaGCTGTCCCCCAAACTGACT +
Preference number: 4 (lower is better)
Translates to: MKAKAFVCFIICRVLRTLQRRSA*LSPKLT
Trigger: AGTCAGTTTGGGGGACAGCCATGCACTGCGCCTCTG...CAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp TGTGCAAGAATTCTCATTTGTAGGAGTTGGTTCTTCGGGATGGTAAATCTGTTCCAGAGGCGCAGTGCATaGCTGTCCCCCAAACTGACT +
Preference number: 4 (lower is better)
Translates to: CARILICRSWFFGMVNLFQRRSA*LSPKLT
Trigger: AGTCAGTTTGGGGGACAGCCATGCACTGCGCCTCTG...GAACAGATTTACCATCCCGAAGAACCAACTCCTACAAATGAGAATTCTTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp ACGAGACTGCTGTGGAAGTTGGTACCTAGGGGTATGCTACAGGGCGTCATGAGCAAGCATCTGAAGTACTaGTATCCAACAGTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: TRLLWKLVPRGMLQGVMSKHLKY*YPTVSK
Trigger: CTTTGAAACTGTTGGATACCAGTACTTCAGATGCTT...GCTCATGACGCCCTGTAGCATACCCCTAGGTACCAACTTCCACAGCAGTCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp CTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATCCTGTGACTTCCTGCACAACTaGCTTGATGCACTCCGTCCG +
Preference number: 4 (lower is better)
Translates to: LFYYLPSSQDFGQYLTSCDFLHN*LDALRP
Trigger: CGGACGGAGTGCATCAAGCCAGTTGTGCAGGAAGTC...ACAGGATGTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp GGGTATGCTACAGGGCGTCATGAGCTGGAACTGAATAAGACATGCCCAAACAGGAGACACATTTGGAAGTaGAGGCTGAACATTTTTCCC +
Preference number: 4 (lower is better)
Translates to: GYATGRHELELNKTCPNRRHIWK*RLNIFP
Trigger: GGGAAAAATGTTCAGCCTCCACTTCCAAATGTGTCT...CCTGTTTGGGCATGTCTTATTCAGTTCCAGCTCATGACGCCCTGTAGCATACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp CTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATCCTGTAGGCTTGGCCCTTGTTaGTCAGAGCATTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LFYYLPSSQDFGQYLTSCRLGPC*SEHSAG
Trigger: TCCTGCTGAATGCTCTGATCAACAAGGGCCAAGCCT...ACAGGATGTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp ATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTGTTTATCTCCCAGGAGGCAGTTaGTGGGGCATCTTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: MKAGLQECVSEVLEISVYLPGGS*WGIFAS
Trigger: ACTGGCAAAGATGCCCCATCAACTGCCTCCTGGGAG...ATAAACAGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp GGGTATGCTACAGGGCGTCATGAGCTGGAACTGAATAAGACATGCCCAAACAGGAAAGCCAGTAAGGCATaGAATTTCAACATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GYATGRHELELNKTCPNRKASKA*NFNIFS
Trigger: GGAGAAGATGTTGAAATTTCATGCCTTACTGGCTTT...CCTGTTTGGGCATGTCTTATTCAGTTCCAGCTCATGACGCCCTGTAGCATACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp TTGGTTCTTCGGGATGGTAAATCTGTTCATTGTGCTGGGCCTAGCAGTAATTGTACAGGTGAGAGAGTTTaGAATGGGTGGTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LVLRDGKSVHCAGPSSNCTGERV*NGWCPG
Trigger: TCCTGGACACCACCCATTTCAAACTCTCTCACCTGT...ACAATTACTGCTAGGCCCAGCACAATGAACAGATTTACCATCCCGAAGAACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp TGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCTACCAGAGGCGCAGTaGATGGCTGTCCCCCAAACT +
Preference number: 4 (lower is better)
Translates to: CMLHEGKGFCLFYYLPSSLPEAQ*MAVPQT
Trigger: AGTTTGGGGGACAGCCATGCACTGCGCCTCTGGTAG...AGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp ATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTGTTTATCTACCAGAGGCGCAGTaGATGGCTGTCCCCCAAACT +
Preference number: 4 (lower is better)
Translates to: MKAGLQECVSEVLEISVYLPEAQ*MAVPQT
Trigger: AGTTTGGGGGACAGCCATGCACTGCGCCTCTGGTAG...ATAAACAGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp AAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCCTTCCGTGTGCATACTaGCTTTGTCCTCCCACAGTC +
Preference number: 4 (lower is better)
Translates to: KAKAFVCFIICRVLRTLVLPCAY*LCPPTV
Trigger: GACTGTGGGAGGACAAAGGCAGTATGCACACGGAAG...GACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp TTGGTTCTTCGGGATGGTAAATCTGTTCATTGTGCTGGGCCTAGCAGTAATTGTGCTCCCTTTCTCCCATaGCAAAGCTGCTCCATATTC +
Preference number: 4 (lower is better)
Translates to: LVLRDGKSVHCAGPSSNCAPFLP*QSCSIF
Trigger: GAATATGGAGCAGCTTTGGCATGGGAGAAAGGGAGC...ACAATTACTGCTAGGCCCAGCACAATGAACAGATTTACCATCCCGAAGAACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp ATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGACAAGACAGAGCGTCTaGCCATGCCTTGAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: MKAKAFVCFIICRVLRTLTRQSV*PCLESL
Trigger: GAGGCTCTCAAGGCATGGCCAGACGCTCTGTCTTGT...CAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp TTTGTGTGTCTACCCCTGAATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTGGGCATGGAGCACACTaGCAAGGATCGAACTTGGCT +
Preference number: 4 (lower is better)
Translates to: FVCLPLNECMLHEGKGFCGHGAH*QGSNLA
Trigger: AGCCAAGTTCGATCCTTGCCAGTGTGCTCCATGCCC...ACAAAAGCCTTTGCCTTCATGAAGCATACATTCATTCAGGGGTAGACACACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp ATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGGGCATGGAGCACACTaGCAAGGATCGAACTTGGCT +
Preference number: 4 (lower is better)
Translates to: MKAKAFVCFIICRVLRTLGHGAH*QGSNLA
Trigger: AGCCAAGTTCGATCCTTGCCAGTGTGCTCCATGCCC...CAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp TTGGTTCTTCGGGATGGTAAATCTGTTCATTGTGCTGGGCCTAGCAGTAATTGTATTTTCTGGAGGAACTaGCTGAGGACACCCGGAATC +
Preference number: 4 (lower is better)
Translates to: LVLRDGKSVHCAGPSSNCIFWRN*LRTPGI
Trigger: GATTCCGGGTGTCCTCAGCCAGTTCCTCCAGAAAAT...ACAATTACTGCTAGGCCCAGCACAATGAACAGATTTACCATCCCGAAGAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp CATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGACTTCCTGCACAACTaGCTTGATGCACTCCGTCCG +
Preference number: 4 (lower is better)
Translates to: HEGKGFCLFYYLPSSQDFDFLHN*LDALRP
Trigger: CGGACGGAGTGCATCAAGCCAGTTGTGCAGGAAGTC...AAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp ATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGGCTGTCCCCCAAACTaGCTGGGACGCAAGACAGAT +
Preference number: 4 (lower is better)
Translates to: MNVCFMKAKAFVCFIICRGCPPN*LGRKTD
Trigger: ATCTGTCTTGCGTCCCAGTCAGTTTGGGGGACAGCC...TCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACATTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp AAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACGATGGAATGCATGGTTaGAAGGCTACCAGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: KGFCLFYYLPSSQDFGQYDGMHG*KATRGA
Trigger: TGCGCCTCTGGTAGCCTTTCAACCATGCATTCCATC...GTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp TTGGTTCTTCGGGATGGTAAATCTGTTCATTGTGCTGGGCCTAGCAGTAATTGTTCTCCTGCCAGAAAATaGAACCCATTGCCCATCAAC +
Preference number: 4 (lower is better)
Translates to: LVLRDGKSVHCAGPSSNCSPARK*NPLPIN
Trigger: GTTGATGGGCAATGGGTTTCATTTTCTGGCAGGAGA...ACAATTACTGCTAGGCCCAGCACAATGAACAGATTTACCATCCCGAAGAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp AGAATTCTCATTTGTAGGAGTTGGTTCTTCGGGATGGTAAATCTGTTCATTGTGACAAGACAGAGCGTCTaGCCATGCCTTGAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: RILICRSWFFGMVNLFIVTRQSV*PCLESL
Trigger: GAGGCTCTCAAGGCATGGCCAGACGCTCTGTCTTGT...CACAATGAACAGATTTACCATCCCGAAGAACCAACTCCTACAAATGAGAATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp TCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATCCTGGGCCGGAACACGGTATaGATTACTTGTCCTACTGCT +
Preference number: 4 (lower is better)
Translates to: SVLLSAEFSGLWSVLDILGRNTV*ITCPTA
Trigger: AGCAGTAGGACAAGTAATCCATACCGTGTTCCGGCC...CAGGATGTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp TTGGTTCTTCGGGATGGTAAATCTGTTCATTGTGCTGGGCCTAGCAGTAATTGTCGACATTTTCCAGATTaGCCGGAACACGGTATGGAT +
Preference number: 4 (lower is better)
Translates to: LVLRDGKSVHCAGPSSNCRHFPD*PEHGMD
Trigger: ATCCATACCGTGTTCCGGCCAATCTGGAAAATGTCG...ACAATTACTGCTAGGCCCAGCACAATGAACAGATTTACCATCCCGAAGAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp AAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACCGTTTCCCTCCTCGTTaGGGGGCAGGATTATTGCAT +
Preference number: 4 (lower is better)
Translates to: KGFCLFYYLPSSQDFGQYRFPPR*GAGLLH
Trigger: ATGCAATAATCCTGCCCCCCAACGAGGAGGGAAACG...GTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp GAAGATATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTATGCACTCCGTCCGTTaGCATTCCACATCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: EDMKAGLQECVSEVLEISMHSVR*HSTSPC
Trigger: ACAAGGGGATGTGGAATGCCAACGGACGGAGTGCAT...AGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCATATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp TTGAATGAAGATATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATGCACTCCGTCCGTTaGCATTCCACATCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: LNEDMKAGLQECVSEVLEMHSVR*HSTSPC
Trigger: ACAAGGGGATGTGGAATGCCAACGGACGGAGTGCAT...CTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCATATCTTCATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp TTTTTGTCAGTAACTTTGAGCATGCCAGTCTGCTGTTTGTGCAAGAATTCTCATAGGCTTGGCCCTTGTTaGTCAGAGCATTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: FLSVTLSMPVCCLCKNSHRLGPC*SEHSAG
Trigger: TCCTGCTGAATGCTCTGATCAACAAGGGCCAAGCCT...ATGAGAATTCTTGCACAAACAGCAGACTGGCATGCTCAAAGTTACTGACAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp GAAGATATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTCTGGCATGTGTACCTTaGTGGCCCAGCAACAACAAA +
Preference number: 4 (lower is better)
Translates to: EDMKAGLQECVSEVLEISLACVP*WPSNNK
Trigger: TTTGTTGTTGCTGGGCCATCAAGGTACACATGCCAG...AGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCATATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp ATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTGTTTATGTTGGTTTCCACCCTTaGAGCACTGTGGGGGCAATA +
Preference number: 4 (lower is better)
Translates to: MKAGLQECVSEVLEISVYVGFHP*STVGAI
Trigger: TATTGCCCCCACAGTGCTTCAAGGGTGGAAACCAAC...ATAAACAGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp AGAATTCTCATTTGTAGGAGTTGGTTCTTCGGGATGGTAAATCTGTTCATTGTGCTTCCGTGTGCATACTaGCTTTGTCCTCCCACAGTC +
Preference number: 4 (lower is better)
Translates to: RILICRSWFFGMVNLFIVLPCAY*LCPPTV
Trigger: GACTGTGGGAGGACAAAGGCAGTATGCACACGGAAG...CACAATGAACAGATTTACCATCCCGAAGAACCAACTCCTACAAATGAGAATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp AAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACCTCCCATGCCAAAGCTaGTCCATATTCACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: KGFCLFYYLPSSQDFGQYLPCQS*SIFTPS
Trigger: GGAAGGAGTGAATATGGAGCAGCTTTGGCATGGGAG...GTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp AAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTTCTCACCATAGGTaGCACTCTGACACACACACA +
Preference number: 4 (lower is better)
Translates to: KAKAFVCFIICRVLRTLVSSHHR*HSDTHT
Trigger: TGTGTGTGTGTCAGAGTGGCACCTATGGTGAGAACT...GACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp CTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATCCTGTGCTAACACAAGGCAATaGTGTCATATCCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LFYYLPSSQDFGQYLTSCANTRQ*CHIPEA
Trigger: GGCTTCTGGGATATGACAGCATTGCCTTGTGTTAGC...ACAGGATGTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337836.10
CDS-3UTR CCA 90 bp TGTGCAAGAATTCTCATTTGTAGGAGTTGGTTCTTCGGGATGGTAAATCTGTTCCAAGGACTTCTCCTCTaGGCTCTCCTGCCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: CARILICRSWFFGMVNLFQGLLL*ALLPEN
Trigger: ATTTTCTGGCAGGAGAGCCCAGAGGAGAAGTCCTTG...GAACAGATTTACCATCCCGAAGAACCAACTCCTACAAATGAGAATTCTTGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp AAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCCTGACAGCTTGTTGGTaGTGCACCTATGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: KAKAFVCFIICRVLRTLVLTACW*CTYVPL
Trigger: AAGTGGAACATAGGTGCACCACCAACAAGCTGTCAG...GACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp CTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATCCTGTGGCAAGGATCGAACTTaGCTGCATACTCTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LFYYLPSSQDFGQYLTSCGKDRT*LHTLAK
Trigger: CTTTGCAAGAGTATGCAGCCAAGTTCGATCCTTGCC...ACAGGATGTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp TTGAATGAAGATATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTTCTGGAGGAACTaGCTGAGGACACCCGGAATC +
Preference number: 4 (lower is better)
Translates to: LNEDMKAGLQECVSEVLEIFWRN*LRTPGI
Trigger: GATTCCGGGTGTCCTCAGCCAGTTCCTCCAGAAAAT...CTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCATATCTTCATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp AAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACAACTGGCGGCCGTCTTaGCAGGAACCAATATGTAGA +
Preference number: 4 (lower is better)
Translates to: KGFCLFYYLPSSQDFGQYNWRPS*QEPICR
Trigger: TCTACATATTGGTTCCTGCCAAGACGGCCGCCAGTT...GTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp ATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAAGACCCCATTCTAACTaGCGGCCGTCTTGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: MNVCFMKAKAFVCFIICRRPHSN*RPSWQE
Trigger: TTCCTGCCAAGACGGCCGCCAGTTAGAATGGGGTCT...TCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp AAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACGACTGCTGTGGAAGTTaGTACCTAGGGGTATGCTAC +
Preference number: 4 (lower is better)
Translates to: KGFCLFYYLPSSQDFGQYDCCGS*YLGVCY
Trigger: GTAGCATACCCCTAGGTACCAACTTCCACAGCAGTC...GTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp GGGTATGCTACAGGGCGTCATGAGCTGGAACTGAATAAGACATGCCCAAACAGGGTGTTTCAGAGGTTCTaGAGATTTCTGTTTATTAAC +
Preference number: 4 (lower is better)
Translates to: GYATGRHELELNKTCPNRVFQRF*RFLFIN
Trigger: GTTAATAAACAGAAATCTCCAGAACCTCTGAAACAC...CCTGTTTGGGCATGTCTTATTCAGTTCCAGCTCATGACGCCCTGTAGCATACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp AGAATTCTCATTTGTAGGAGTTGGTTCTTCGGGATGGTAAATCTGTTCATTGTGACAAGGGTCACAGTCTaGCCATGGTCCAAAATCTCC +
Preference number: 4 (lower is better)
Translates to: RILICRSWFFGMVNLFIVTRVTV*PWSKIS
Trigger: GGAGATTTTGGACCATGGTCAGACTGTGACCCTTGT...CACAATGAACAGATTTACCATCCCGAAGAACCAACTCCTACAAATGAGAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp TGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTACAAGGGTCACAGTCTaGCCATGGTCCAAAATCTCC +
Preference number: 4 (lower is better)
Translates to: CMLHEGKGFCLFYYLPSSTRVTV*PWSKIS
Trigger: GGAGATTTTGGACCATGGTCAGACTGTGACCCTTGT...AGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp ATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGATGGAATGCATGGTTaGAAGGCTACCAGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: MNVCFMKAKAFVCFIICRDGMHG*KATRGA
Trigger: TGCGCCTCTGGTAGCCTTTCAACCATGCATTCCATC...TCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp AAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACACCTTCATGTTTCTCTaGCAGCTTGTTGGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: KGFCLFYYLPSSQDFGQYTFMFL*QLVGGA
Trigger: TGCACCACCAACAAGCTGTCAGAGAAACATGAAGGT...GTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp CATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTACCTTCATGTTTCTCTaGCAGCTTGTTGGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: HEGKGFCLFYYLPSSQDFTFMFL*QLVGGA
Trigger: TGCACCACCAACAAGCTGTCAGAGAAACATGAAGGT...AAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp CATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTCGTCTGGTAAGCATCTaGAGTACTGGTATCCAACAG +
Preference number: 4 (lower is better)
Translates to: HEGKGFCLFYYLPSSQDFRLVSI*STGIQQ
Trigger: CTGTTGGATACCAGTACTTCAGATGCTTACCAGACG...AAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp CATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCCACTGAGTCCATaGATAGTGATCACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: HEGKGFCLFYYLPSSQDFGPLSP*IVITEA
Trigger: TGCTTCTGTGATCACTATGCATGGACTCAGTGGACC...AAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp CTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATCCTGTCTATTTGTCTGTGTCTaGTCTGGGTTCCAGAATTGC +
Preference number: 4 (lower is better)
Translates to: LFYYLPSSQDFGQYLTSCLFVCV*SGFQNC
Trigger: GCAATTCTGGAACCCAGAGCAGACACAGACAAATAG...ACAGGATGTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp TTTTTGTCAGTAACTTTGAGCATGCCAGTCTGCTGTTTGTGCAAGAATTCTCATGCTCCCTTTCTCCCATaGCAAAGCTGCTCCATATTC +
Preference number: 4 (lower is better)
Translates to: FLSVTLSMPVCCLCKNSHAPFLP*QSCSIF
Trigger: GAATATGGAGCAGCTTTGGCATGGGAGAAAGGGAGC...ATGAGAATTCTTGCACAAACAGCAGACTGGCATGCTCAAAGTTACTGACAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp CTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATCCTGTGTTCCGTTTTGTCACTaGACAGGGGATGTTTCTTAC +
Preference number: 4 (lower is better)
Translates to: LFYYLPSSQDFGQYLTSCVPFCH*TGDVSY
Trigger: GTAAGAAACATCCCCTGTGCAGTGACAAAACGGAAC...ACAGGATGTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp TGTGCAAGAATTCTCATTTGTAGGAGTTGGTTCTTCGGGATGGTAAATCTGTTCAGGACACCCGGAATCTaGTTCTATCTCAGGAAGATC +
Preference number: 4 (lower is better)
Translates to: CARILICRSWFFGMVNLFRTPGI*FYLRKI
Trigger: GATCTTCCTGAGATAGAAGCAGATTCCGGGTGTCCT...GAACAGATTTACCATCCCGAAGAACCAACTCCTACAAATGAGAATTCTTGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp CTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATTGTCAGGACTTCCTaGACAACTGGCTTGATGCAC +
Preference number: 4 (lower is better)
Translates to: LLSVLLSAEFSGLWSVLDIVRTS*TTGLMH
Trigger: GTGCATCAAGCCAGTTGTGCAGGAAGTCCTGACAAT...GTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp TTGGTTCTTCGGGATGGTAAATCTGTTCATTGTGCTGGGCCTAGCAGTAATTGTTTGAGCATGCCAGTCTaGTGTTTGTGCAAGAATTCT +
Preference number: 4 (lower is better)
Translates to: LVLRDGKSVHCAGPSSNCLSMPV*CLCKNS
Trigger: AGAATTCTTGCACAAACAGCAGACTGGCATGCTCAA...ACAATTACTGCTAGGCCCAGCACAATGAACAGATTTACCATCCCGAAGAACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp TGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTTCACAGAAGCAGGCTTaGCCCTTGTTGATCAGAGCA +
Preference number: 4 (lower is better)
Translates to: CMLHEGKGFCLFYYLPSSSQKQA*PLLIRA
Trigger: TGCTCTGATCAACAAGGGCCAAGCCTGCTTCTGTGA...AGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp TTTTTGTCAGTAACTTTGAGCATGCCAGTCTGCTGTTTGTGCAAGAATTCTCATTCACAGAAGCAGGCTTaGCCCTTGTTGATCAGAGCA +
Preference number: 4 (lower is better)
Translates to: FLSVTLSMPVCCLCKNSHSQKQA*PLLIRA
Trigger: TGCTCTGATCAACAAGGGCCAAGCCTGCTTCTGTGA...ATGAGAATTCTTGCACAAACAGCAGACTGGCATGCTCAAAGTTACTGACAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp ATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGCGACATTTTCCAGATTaGCCGGAACACGGTATGGAT +
Preference number: 4 (lower is better)
Translates to: MKAKAFVCFIICRVLRTLRHFPD*PEHGMD
Trigger: ATCCATACCGTGTTCCGGCCAATCTGGAAAATGTCG...CAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp AAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTCTCTGACAGCTTGTTaGTGGTGCACCTATGTTCCA +
Preference number: 4 (lower is better)
Translates to: KGFCLFYYLPSSQDFGQYSLTAC*WCTYVP
Trigger: TGGAACATAGGTGCACCACCAACAAGCTGTCAGAGA...GTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp CTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATCCTGTCTCGAATCAGGGATATaGATTTCTCTGCTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: LFYYLPSSQDFGQYLTSCLESGI*ISLLPV
Trigger: TACAGGGAGCAGAGAAATCCATATCCCTGATTCGAG...ACAGGATGTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp TTGAATGAAGATATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGTTACCAAGTCCACGATaGGGGCAAGCTCAAAGTCAA +
Preference number: 4 (lower is better)
Translates to: LNEDMKAGLQECVSEVLELPSPR*GQAQSQ
Trigger: TTGACTTTGAGCTTGCCCCCATCGTGGACTTGGTAA...CTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCATATCTTCATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp ATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTGTTTATGCCATTATTAGGGCATaGAGCACACTGGCAAGGATC +
Preference number: 4 (lower is better)
Translates to: MKAGLQECVSEVLEISVYAIIRA*STLARI
Trigger: GATCCTTGCCAGTGTGCTCCATGCCCTAATAATGGC...ATAAACAGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp TTTTTGTCAGTAACTTTGAGCATGCCAGTCTGCTGTTTGTGCAAGAATTCTCATGCCATTATTAGGGCATaGAGCACACTGGCAAGGATC +
Preference number: 4 (lower is better)
Translates to: FLSVTLSMPVCCLCKNSHAIIRA*STLARI
Trigger: GATCCTTGCCAGTGTGCTCCATGCCCTAATAATGGC...ATGAGAATTCTTGCACAAACAGCAGACTGGCATGCTCAAAGTTACTGACAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp AGAAGTCACATTATTTTTGTACAATGTGAACAGGAGAATTTACGAGACTGCTGTAGACCCCATTCTAACTaGCGGCCGTCTTGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: RSHIIFVQCEQENLRDCCRPHSN*RPSWQE
Trigger: TTCCTGCCAAGACGGCCGCCAGTTAGAATGGGGTCT...ACAGCAGTCTCGTAAATTCTCCTGTTCACATTGTACAAAAATAATGTGACTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp TTGGTTCTTCGGGATGGTAAATCTGTTCATTGTGCTGGGCCTAGCAGTAATTGTATAGGCAGACACATTTaGAAGTGGAGGCTGAACATT +
Preference number: 4 (lower is better)
Translates to: LVLRDGKSVHCAGPSSNCIGRHI*KWRLNI
Trigger: AATGTTCAGCCTCCACTTCCAAATGTGTCTGCCTAT...ACAATTACTGCTAGGCCCAGCACAATGAACAGATTTACCATCCCGAAGAACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp AAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTTACGAGACTGCTGTaGAAGTTGGTACCTAGGGGT +
Preference number: 4 (lower is better)
Translates to: KGFCLFYYLPSSQDFGQYFTRLL*KLVPRG
Trigger: ACCCCTAGGTACCAACTTCCACAGCAGTCTCGTAAA...GTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp CTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACTTTACGAGACTGCTGTaGAAGTTGGTACCTAGGGGT +
Preference number: 4 (lower is better)
Translates to: LLSVLLSAEFSGLWSVLDFTRLL*KLVPRG
Trigger: ACCCCTAGGTACCAACTTCCACAGCAGTCTCGTAAA...GTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp CTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACAGAATTGCAAGTTTTTaGGCAGCTGGTCCACTGAGT +
Preference number: 4 (lower is better)
Translates to: LLSVLLSAEFSGLWSVLDRIASF*AAGPLS
Trigger: ACTCAGTGGACCAGCTGCTCAAAAACTTGCAATTCT...GTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp AGAATTCTCATTTGTAGGAGTTGGTTCTTCGGGATGGTAAATCTGTTCATTGTGTCTCCTGCCAGAAAATaGAACCCATTGCCCATCAAC +
Preference number: 4 (lower is better)
Translates to: RILICRSWFFGMVNLFIVSPARK*NPLPIN
Trigger: GTTGATGGGCAATGGGTTTCATTTTCTGGCAGGAGA...CACAATGAACAGATTTACCATCCCGAAGAACCAACTCCTACAAATGAGAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp ATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGCTTGCAAAGCTTTCCTaGGGTTGTTCCGTTTTGTCA +
Preference number: 4 (lower is better)
Translates to: MKAKAFVCFIICRVLRTLLAKLS*GCSVLS
Trigger: TGACAAAACGGAACAACCTCAGGAAAGCTTTGCAAG...CAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp ATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGACTGGCATGTGTACCTTaGTGGCCCAGCAACAACAAA +
Preference number: 4 (lower is better)
Translates to: MNVCFMKAKAFVCFIICRLACVP*WPSNNK
Trigger: TTTGTTGTTGCTGGGCCATCAAGGTACACATGCCAG...TCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp GAAGATATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTCACACAGAGATCTTCTaGATGATGGCTACAGTCTTC +
Preference number: 4 (lower is better)
Translates to: EDMKAGLQECVSEVLEISHTEIF*MMATVF
Trigger: GAAGACTGTAGCCATCATTCAGAAGATCTCTGTGTG...AGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCATATCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp GAAGATATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTGAGCCTCCAGGCCTATaGATCTATGACTTGAAGAAA +
Preference number: 4 (lower is better)
Translates to: EDMKAGLQECVSEVLEISEPPGL*IYDLKK
Trigger: TTTCTTCAAGTCATAGATGCATAGGCCTGGAGGCTC...AGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCATATCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263413.7
CDS-3UTR GCA 90 bp TTGAATGAAGATATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGTCTGGGTTCCAGAATTaGAAGTTTTTGAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LNEDMKAGLQECVSEVLESGFQN*KFLSSW
Trigger: CCAGCTGCTCAAAAACTTGCAATTCTGGAACCCAGA...CTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCATATCTTCATTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp ATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGCTATTTGTCTGTGTCTaGTCTGGGTTCCAGAATTGC +
Preference number: 4 (lower is better)
Translates to: MKAKAFVCFIICRVLRTLLFVCV*SGFQNC
Trigger: GCAATTCTGGAACCCAGAGCAGACACAGACAAATAG...CAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp TGTGCAAGAATTCTCATTTGTAGGAGTTGGTTCTTCGGGATGGTAAATCTGTTCGATTATACTTCCGTGTaGATACTGCCTTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: CARILICRSWFFGMVNLFDYTSV*ILPLSS
Trigger: GGAGGACAAAGGCAGTATGCACACGGAAGTATAATC...GAACAGATTTACCATCCCGAAGAACCAACTCCTACAAATGAGAATTCTTGCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp ATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGACAGCTTGTTGGTGGTaGACCTATGTTCCACTTTTG +
Preference number: 4 (lower is better)
Translates to: MKAKAFVCFIICRVLRTLTACWW*TYVPLL
Trigger: CAAAAGTGGAACATAGGTGCACCACCAACAAGCTGT...CAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp ATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGACTCCCATGCCAAAGCTaGTCCATATTCACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: MNVCFMKAKAFVCFIICRLPCQS*SIFTPS
Trigger: GGAAGGAGTGAATATGGAGCAGCTTTGGCATGGGAG...TCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp AAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGGATCGAACTTGGCTaGATACTCTTGCAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: KAKAFVCFIICRVLRTLVRIELG*ILLQSF
Trigger: AAAGCTTTGCAAGAGTATGCAGCCAAGTTCGATCCT...GACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp AGAATTCTCATTTGTAGGAGTTGGTTCTTCGGGATGGTAAATCTGTTCATTGTGAGTTCTCACCATAGGTaGCACTCTGACACACACACA +
Preference number: 4 (lower is better)
Translates to: RILICRSWFFGMVNLFIVSSHHR*HSDTHT
Trigger: TGTGTGTGTGTCAGAGTGGCACCTATGGTGAGAACT...CACAATGAACAGATTTACCATCCCGAAGAACCAACTCCTACAAATGAGAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp TTTTTGTCAGTAACTTTGAGCATGCCAGTCTGCTGTTTGTGCAAGAATTCTCATAGGACACCCGGAATCTaGTTCTATCTCAGGAAGATC +
Preference number: 4 (lower is better)
Translates to: FLSVTLSMPVCCLCKNSHRTPGI*FYLRKI
Trigger: GATCTTCCTGAGATAGAAGCAGATTCCGGGTGTCCT...ATGAGAATTCTTGCACAAACAGCAGACTGGCATGCTCAAAGTTACTGACAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp TTTGTCAGTAACTTTGAGCATGCCAGTCTGCTGTTTGTGCAAGAATTCTCATTTATTGTCAGGACTTCCTaGACAACTGGCTTGATGCAC +
Preference number: 4 (lower is better)
Translates to: FVSNFEHASLLFVQEFSFIVRTS*TTGLMH
Trigger: GTGCATCAAGCCAGTTGTGCAGGAAGTCCTGACAAT...AAATGAGAATTCTTGCACAAACAGCAGACTGGCATGCTCAAAGTTACTGACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp CTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACGAACTGAATAAGACATaGCCAAACAGGAGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: LLSVLLSAEFSGLWSVLDELNKT*PNRRVR
Trigger: CCTGACTCTCCTGTTTGGGCATGTCTTATTCAGTTC...GTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp GAAGATATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTGAACTGAATAAGACATaGCCAAACAGGAGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: EDMKAGLQECVSEVLEISELNKT*PNRRVR
Trigger: CCTGACTCTCCTGTTTGGGCATGTCTTATTCAGTTC...AGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCATATCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp CTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACCTTAGATGGAATGCATaGTTGAAAGGCTACCAGAGG +
Preference number: 4 (lower is better)
Translates to: LLSVLLSAEFSGLWSVLDLRWNA*LKGYQR
Trigger: CCTCTGGTAGCCTTTCAACCATGCATTCCATCTAAG...GTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp TTTGTGTGTCTACCCCTGAATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTCTTAGATGGAATGCATaGTTGAAAGGCTACCAGAGG +
Preference number: 4 (lower is better)
Translates to: FVCLPLNECMLHEGKGFCLRWNA*LKGYQR
Trigger: CCTCTGGTAGCCTTTCAACCATGCATTCCATCTAAG...ACAAAAGCCTTTGCCTTCATGAAGCATACATTCATTCAGGGGTAGACACACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp ATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGGCCGGAACACGGTATaGATTACTTGTCCTACTGCT +
Preference number: 4 (lower is better)
Translates to: MNVCFMKAKAFVCFIICRGRNTV*ITCPTA
Trigger: AGCAGTAGGACAAGTAATCCATACCGTGTTCCGGCC...TCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp AAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACCTCGAATCAGGGATATaGATTTCTCTGCTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: KGFCLFYYLPSSQDFGQYLESGI*ISLLPV
Trigger: TACAGGGAGCAGAGAAATCCATATCCCTGATTCGAG...GTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp TTTGTCAGTAACTTTGAGCATGCCAGTCTGCTGTTTGTGCAAGAATTCTCATTTTTACCAAGTCCACGATaGGGGCAAGCTCAAAGTCAA +
Preference number: 4 (lower is better)
Translates to: FVSNFEHASLLFVQEFSFLPSPR*GQAQSQ
Trigger: TTGACTTTGAGCTTGCCCCCATCGTGGACTTGGTAA...AAATGAGAATTCTTGCACAAACAGCAGACTGGCATGCTCAAAGTTACTGACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp AGAAGTCACATTATTTTTGTACAATGTGAACAGGAGAATTTACGAGACTGCTGTCGTTTCCCTCCTCGTTaGGGGGCAGGATTATTGCAT +
Preference number: 4 (lower is better)
Translates to: RSHIIFVQCEQENLRDCCRFPPR*GAGLLH
Trigger: ATGCAATAATCCTGCCCCCCAACGAGGAGGGAAACG...ACAGCAGTCTCGTAAATTCTCCTGTTCACATTGTACAAAAATAATGTGACTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp TCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATCCTGGAGAATGAGCCTTGTTaGTTTTCATTGTGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: SVLLSAEFSGLWSVLDILENEPC*FSLCPR
Trigger: TCTTGGACACAATGAAAATCAACAAGGCTCATTCTC...CAGGATGTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp TTTGTCAGTAACTTTGAGCATGCCAGTCTGCTGTTTGTGCAAGAATTCTCATTTCTTGCAAAGCTTTCCTaGGGTTGTTCCGTTTTGTCA +
Preference number: 4 (lower is better)
Translates to: FVSNFEHASLLFVQEFSFLAKLS*GCSVLS
Trigger: TGACAAAACGGAACAACCTCAGGAAAGCTTTGCAAG...AAATGAGAATTCTTGCACAAACAGCAGACTGGCATGCTCAAAGTTACTGACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp TTGGTTCTTCGGGATGGTAAATCTGTTCATTGTGCTGGGCCTAGCAGTAATTGTATTGTTTTCCATGATTaGAAATGTGCAGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LVLRDGKSVHCAGPSSNCIVFHD*KCAVFL
Trigger: GAGGAAGACTGCACATTTTCAATCATGGAAAACAAT...ACAATTACTGCTAGGCCCAGCACAATGAACAGATTTACCATCCCGAAGAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp AGAAGTCACATTATTTTTGTACAATGTGAACAGGAGAATTTACGAGACTGCTGTACAGGTGAGAGAGTTTaGAATGGGTGGTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RSHIIFVQCEQENLRDCCTGERV*NGWCPG
Trigger: TCCTGGACACCACCCATTTCAAACTCTCTCACCTGT...ACAGCAGTCTCGTAAATTCTCCTGTTCACATTGTACAAAAATAATGTGACTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp ATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTGTTTATAATGCATTCAGATCCTaGTTGTTTCTGTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: MKAGLQECVSEVLEISVYNAFRS*LFLSQL
Trigger: CAGCTGGGACAGAAACAATCAGGATCTGAATGCATT...ATAAACAGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp AAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACCAGAGATCTTCTGAATaGTGGCTACAGTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: KGFCLFYYLPSSQDFGQYQRSSE*WLQSSS
Trigger: AGAAGAAGACTGTAGCCATCATTCAGAAGATCTCTG...GTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp TTTTTGTCAGTAACTTTGAGCATGCCAGTCTGCTGTTTGTGCAAGAATTCTCATCACACAGAGATCTTCTaGATGATGGCTACAGTCTTC +
Preference number: 4 (lower is better)
Translates to: FLSVTLSMPVCCLCKNSHHTEIF*MMATVF
Trigger: GAAGACTGTAGCCATCATTCAGAAGATCTCTGTGTG...ATGAGAATTCTTGCACAAACAGCAGACTGGCATGCTCAAAGTTACTGACAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp TTGAATGAAGATATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGCTTTGTGCTGTTGGATaGAAGTCTTGTCCTTTCAAG +
Preference number: 4 (lower is better)
Translates to: LNEDMKAGLQECVSEVLELCAVG*KSCPFK
Trigger: CTTGAAAGGACAAGACTTTCATCCAACAGCACAAAG...CTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCATATCTTCATTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp CATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTTTTGGAAGTGGAGGCTaGACATTTTTCCCAGTCATA +
Preference number: 4 (lower is better)
Translates to: HEGKGFCLFYYLPSSQDFFGSGG*TFFPVI
Trigger: TATGACTGGGAAAAATGTTCAGCCTCCACTTCCAAA...AAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp GAAGATATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTACTTTGGTCAGTACTTaGCATCCTGTATACACACTC +
Preference number: 4 (lower is better)
Translates to: EDMKAGLQECVSEVLEISTLVST*HPVYTL
Trigger: GAGTGTGTATACAGGATGTCAAGTACTGACCAAAGT...AGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCATATCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp TTTGTCAGTAACTTTGAGCATGCCAGTCTGCTGTTTGTGCAAGAATTCTCATTTTCTGGGTTCCAGAATTaGAAGTTTTTGAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FVSNFEHASLLFVQEFSFSGFQN*KFLSSW
Trigger: CCAGCTGCTCAAAAACTTGCAATTCTGGAACCCAGA...AAATGAGAATTCTTGCACAAACAGCAGACTGGCATGCTCAAAGTTACTGACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp CATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTTTGATGGGGCATCTTTaGCAGTTACATTCTCTAGTC +
Preference number: 4 (lower is better)
Translates to: HEGKGFCLFYYLPSSQDFLMGHL*QLHSLV
Trigger: GACTAGAGAATGTAACTGGCAAAGATGCCCCATCAA...AAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp AGAATTCTCATTTGTAGGAGTTGGTTCTTCGGGATGGTAAATCTGTTCATTGTGACAGCTTGTTGGTGGTaGACCTATGTTCCACTTTTG +
Preference number: 4 (lower is better)
Translates to: RILICRSWFFGMVNLFIVTACWW*TYVPLL
Trigger: CAAAAGTGGAACATAGGTGCACCACCAACAAGCTGT...CACAATGAACAGATTTACCATCCCGAAGAACCAACTCCTACAAATGAGAATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp ATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTGTTTATGTTCCGTTTTGTCACTaGACAGGGGATGTTTCTTAC +
Preference number: 4 (lower is better)
Translates to: MKAGLQECVSEVLEISVYVPFCH*TGDVSY
Trigger: GTAAGAAACATCCCCTGTGCAGTGACAAAACGGAAC...ATAAACAGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp TTTGTGTGTCTACCCCTGAATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTAGGATCGAACTTGGCTaGATACTCTTGCAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: FVCLPLNECMLHEGKGFCRIELG*ILLQSF
Trigger: AAAGCTTTGCAAGAGTATGCAGCCAAGTTCGATCCT...ACAAAAGCCTTTGCCTTCATGAAGCATACATTCATTCAGGGGTAGACACACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp GAAGATATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTCCACTGTCCGTCTACTaGATTGGATTTATAATCTGG +
Preference number: 4 (lower is better)
Translates to: EDMKAGLQECVSEVLEISPLSVY*IGFIIW
Trigger: CCAGATTATAAATCCAATGCAGTAGACGGACAGTGG...AGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCATATCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp TTGGTTCTTCGGGATGGTAAATCTGTTCATTGTGCTGGGCCTAGCAGTAATTGTAGGATTCTTTCTTTGTaGTGTTGGATGAAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: LVLRDGKSVHCAGPSSNCRILSL*CWMKVL
Trigger: CAAGACTTTCATCCAACAGCACAAAGAAAGAATCCT...ACAATTACTGCTAGGCCCAGCACAATGAACAGATTTACCATCCCGAAGAACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp TCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATCCTGTTCCATCTTCCTGTTTaGACATCTTATAGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: SVLLSAEFSGLWSVLDILFHLPV*TSYSSH
Trigger: GTGGGAACTATAAGATGTGCAAACAGGAAGATGGAA...CAGGATGTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp CTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACTTGAGCATGCCAGTCTaGTGTTTGTGCAAGAATTCT +
Preference number: 4 (lower is better)
Translates to: LLSVLLSAEFSGLWSVLDLSMPV*CLCKNS
Trigger: AGAATTCTTGCACAAACAGCAGACTGGCATGCTCAA...GTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp TTTGTGTGTCTACCCCTGAATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTGAGAATTTACGAGACTaGTGTGGAAGTTGGTACCTA +
Preference number: 4 (lower is better)
Translates to: FVCLPLNECMLHEGKGFCENLRD*CGSWYL
Trigger: TAGGTACCAACTTCCACAGCAGTCTCGTAAATTCTC...ACAAAAGCCTTTGCCTTCATGAAGCATACATTCATTCAGGGGTAGACACACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp ATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGATGCATTCTAACTTTCTaGCAATGCAGCGGCCACTGT +
Preference number: 4 (lower is better)
Translates to: MNVCFMKAKAFVCFIICRCILTF*QCSGHC
Trigger: ACAGTGGCCGCTGCATTGCCAGAAAGTTAGAATGCA...TCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp AGAAGTCACATTATTTTTGTACAATGTGAACAGGAGAATTTACGAGACTGCTGTCAAGGACTTCTCCTCTaGGCTCTCCTGCCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: RSHIIFVQCEQENLRDCCQGLLL*ALLPEN
Trigger: ATTTTCTGGCAGGAGAGCCCAGAGGAGAAGTCCTTG...ACAGCAGTCTCGTAAATTCTCCTGTTCACATTGTACAAAAATAATGTGACTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp ATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGATCTCTGACAGCTTGTTaGTGGTGCACCTATGTTCCA +
Preference number: 4 (lower is better)
Translates to: MNVCFMKAKAFVCFIICRSLTAC*WCTYVP
Trigger: TGGAACATAGGTGCACCACCAACAAGCTGTCAGAGA...TCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp AAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACGATAAATCCATTTTCTaGAGGAACTGGCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: KGFCLFYYLPSSQDFGQYDKSIF*RNWLRT
Trigger: TGTCCTCAGCCAGTTCCTCCAGAAAATGGATTTATC...GTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp TTTGTGTGTCTACCCCTGAATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTGATAAATCCATTTTCTaGAGGAACTGGCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: FVCLPLNECMLHEGKGFCDKSIF*RNWLRT
Trigger: TGTCCTCAGCCAGTTCCTCCAGAAAATGGATTTATC...ACAAAAGCCTTTGCCTTCATGAAGCATACATTCATTCAGGGGTAGACACACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp TTGAATGAAGATATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGAGACACATTTGGAAGTaGAGGCTGAACATTTTTCCC +
Preference number: 4 (lower is better)
Translates to: LNEDMKAGLQECVSEVLERHIWK*RLNIFP
Trigger: GGGAAAAATGTTCAGCCTCCACTTCCAAATGTGTCT...CTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCATATCTTCATTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp AGAAGTCACATTATTTTTGTACAATGTGAACAGGAGAATTTACGAGACTGCTGTGACTGCTGTGGAAGTTaGTACCTAGGGGTATGCTAC +
Preference number: 4 (lower is better)
Translates to: RSHIIFVQCEQENLRDCCDCCGS*YLGVCY
Trigger: GTAGCATACCCCTAGGTACCAACTTCCACAGCAGTC...ACAGCAGTCTCGTAAATTCTCCTGTTCACATTGTACAAAAATAATGTGACTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp AAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCTTGTCCTACTGCTTTTaGCAGTTTTACATATTCCTC +
Preference number: 4 (lower is better)
Translates to: KAKAFVCFIICRVLRTLVLSYCF*QFYIFL
Trigger: GAGGAATATGTAAAACTGTCAAAAGCAGTAGGACAA...GACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp AGAAGTCACATTATTTTTGTACAATGTGAACAGGAGAATTTACGAGACTGCTGTCGTCTGGTAAGCATCTaGAGTACTGGTATCCAACAG +
Preference number: 4 (lower is better)
Translates to: RSHIIFVQCEQENLRDCCRLVSI*STGIQQ
Trigger: CTGTTGGATACCAGTACTTCAGATGCTTACCAGACG...ACAGCAGTCTCGTAAATTCTCCTGTTCACATTGTACAAAAATAATGTGACTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp CTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACTATCTTTTTCACAGGTaGGAGAGTTTGAAATGGGTG +
Preference number: 4 (lower is better)
Translates to: LLSVLLSAEFSGLWSVLDYLFHR*ESLKWV
Trigger: CACCCATTTCAAACTCTCTCACCTGTGAAAAAGATA...GTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp ATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGTGTTTCTGTCCCAGCTaGCAATGGCCTTTTAATTTT +
Preference number: 4 (lower is better)
Translates to: MKAKAFVCFIICRVLRTLCFCPS*QWPFNF
Trigger: AAAATTAAAAGGCCATTGTCAGCTGGGACAGAAACA...CAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp AAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTGTTTCTGTCCCAGCTaGCAATGGCCTTTTAATTTT +
Preference number: 4 (lower is better)
Translates to: KGFCLFYYLPSSQDFGQYCFCPS*QWPFNF
Trigger: AAAATTAAAAGGCCATTGTCAGCTGGGACAGAAACA...GTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp TTGAATGAAGATATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGAAACTTACAAGCGGGTaGAGTAAAGTAATCGTTGGA +
Preference number: 4 (lower is better)
Translates to: LNEDMKAGLQECVSEVLEKLTSG*SKVIVG
Trigger: TCCAACGATTACTTTACTTCACCCGCTTGTAAGTTT...CTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCATATCTTCATTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp AGAATTCTCATTTGTAGGAGTTGGTTCTTCGGGATGGTAAATCTGTTCATTGTGCTTTGTGCTGTTGGATaGAAGTCTTGTCCTTTCAAG +
Preference number: 4 (lower is better)
Translates to: RILICRSWFFGMVNLFIVLCAVG*KSCPFK
Trigger: CTTGAAAGGACAAGACTTTCATCCAACAGCACAAAG...CACAATGAACAGATTTACCATCCCGAAGAACCAACTCCTACAAATGAGAATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp TTTTTGTCAGTAACTTTGAGCATGCCAGTCTGCTGTTTGTGCAAGAATTCTCATTTGTGTGTCTACCCCTaGATGAATGTATGCTTCATG +
Preference number: 4 (lower is better)
Translates to: FLSVTLSMPVCCLCKNSHLCVYP*MNVCFM
Trigger: CATGAAGCATACATTCATTCAGGGGTAGACACACAA...ATGAGAATTCTTGCACAAACAGCAGACTGGCATGCTCAAAGTTACTGACAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp TGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCATTCTCTAGTCTCCTaGTTGCTGCAAATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: CMLHEGKGFCLFYYLPSSHSLVS*LLQICS
Trigger: TGAACAGATTTGCAGCAAGCAGGAGACTAGAGAATG...AGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp ATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGATTATACTTCCGTGTaGATACTGCCTTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: MNVCFMKAKAFVCFIICRDYTSV*ILPLSS
Trigger: GGAGGACAAAGGCAGTATGCACACGGAAGTATAATC...TCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACATTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp ATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTGTTTATGAGAATTTACGAGACTaGTGTGGAAGTTGGTACCTA +
Preference number: 4 (lower is better)
Translates to: MKAGLQECVSEVLEISVYENLRD*CGSWYL
Trigger: TAGGTACCAACTTCCACAGCAGTCTCGTAAATTCTC...ATAAACAGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp TTGGTTCTTCGGGATGGTAAATCTGTTCATTGTGCTGGGCCTAGCAGTAATTGTGTCATCATTGATACATaGTTGTCCATTGTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LVLRDGKSVHCAGPSSNCVIIDT*LSIVFH
Trigger: ATGGAAAACAATGGACAACCATGTATCAATGATGAC...ACAATTACTGCTAGGCCCAGCACAATGAACAGATTTACCATCCCGAAGAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp ATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTGTTTATAAAGCCAGTAAGGCATaGAATTTCAACATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: MKAGLQECVSEVLEISVYKASKA*NFNIFS
Trigger: GGAGAAGATGTTGAAATTTCATGCCTTACTGGCTTT...ATAAACAGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp ATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTGTTTATAAACTTACAAGCGGGTaGAGTAAAGTAATCGTTGGA +
Preference number: 4 (lower is better)
Translates to: MKAGLQECVSEVLEISVYKLTSG*SKVIVG
Trigger: TCCAACGATTACTTTACTTCACCCGCTTGTAAGTTT...ATAAACAGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp TGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTTTGATGATCCCATTTTaGCACAGTAGAGTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: CMLHEGKGFCLFYYLPSSLMIPF*HSRVGF
Trigger: GAAACCAACTCTACTGTGTCAAAATGGGATCATCAA...AGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp TTTGTCAGTAACTTTGAGCATGCCAGTCTGCTGTTTGTGCAAGAATTCTCATTTTTGATGATCCCATTTTaGCACAGTAGAGTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: FVSNFEHASLLFVQEFSFLMIPF*HSRVGF
Trigger: GAAACCAACTCTACTGTGTCAAAATGGGATCATCAA...AAATGAGAATTCTTGCACAAACAGCAGACTGGCATGCTCAAAGTTACTGACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp AGAAGTCACATTATTTTTGTACAATGTGAACAGGAGAATTTACGAGACTGCTGTGTCATGAGCTGGAACTaGATAAGACATGCCCAAACA +
Preference number: 4 (lower is better)
Translates to: RSHIIFVQCEQENLRDCCVMSWN*IRHAQT
Trigger: TGTTTGGGCATGTCTTATTCAGTTCCAGCTCATGAC...ACAGCAGTCTCGTAAATTCTCCTGTTCACATTGTACAAAAATAATGTGACTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp ATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAACTTTGGTCAGTACTTaGCATCCTGTATACACACTC +
Preference number: 4 (lower is better)
Translates to: MNVCFMKAKAFVCFIICRTLVST*HPVYTL
Trigger: GAGTGTGTATACAGGATGTCAAGTACTGACCAAAGT...TCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp ATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGATTGTGTGTCTACCCCTaGATGAATGTATGCTTCATG +
Preference number: 4 (lower is better)
Translates to: MNVCFMKAKAFVCFIICRLCVYP*MNVCFM
Trigger: CATGAAGCATACATTCATTCAGGGGTAGACACACAA...TCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp ATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTGTTTATTTTCAAGTCATCTTCTaGAGTTTGTACCTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: MKAGLQECVSEVLEISVYFQVIF*SLYLKA
Trigger: GGCTTTGAGGTACAAACTGCAGAAGATGACTTGAAA...ATAAACAGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp TGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTTTTCAAGTCATCTTCTaGAGTTTGTACCTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: CMLHEGKGFCLFYYLPSSFQVIF*SLYLKA
Trigger: GGCTTTGAGGTACAAACTGCAGAAGATGACTTGAAA...AGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp CATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTAAGACATCAGAAAGGTaGAGATCTTTAGCTTTCGTT +
Preference number: 4 (lower is better)
Translates to: HEGKGFCLFYYLPSSQDFKTSER*RSLAFV
Trigger: AACGAAAGCTAAAGATCTGCACCTTTCTGATGTCTT...AAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp ATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTGTTTATGTCCGTCTACTGCATTaGATTTATAATCTGGAGACT +
Preference number: 4 (lower is better)
Translates to: MKAGLQECVSEVLEISVYVRLLH*IYNLET
Trigger: AGTCTCCAGATTATAAATCCAATGCAGTAGACGGAC...ATAAACAGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp ATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAATAGGCAGACACATTTaGAAGTGGAGGCTGAACATT +
Preference number: 4 (lower is better)
Translates to: MNVCFMKAKAFVCFIICRIGRHI*KWRLNI
Trigger: AATGTTCAGCCTCCACTTCCAAATGTGTCTGCCTAT...TCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp ATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTGTTTATATTGTTTTCCATGATTaGAAATGTGCAGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: MKAGLQECVSEVLEISVYIVFHD*KCAVFL
Trigger: GAGGAAGACTGCACATTTTCAATCATGGAAAACAAT...ATAAACAGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp GAAGATATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTAGCGAAATTTATTCTTaGAGTCAGCCTCTTCAATTT +
Preference number: 4 (lower is better)
Translates to: EDMKAGLQECVSEVLEISSEIYS*SQPLQF
Trigger: AAATTGAAGAGGCTGACTGCAAGAATAAATTTCGCT...AGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCATATCTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp TGTGCAAGAATTCTCATTTGTAGGAGTTGGTTCTTCGGGATGGTAAATCTGTTCCCAACCAAGTATAGTTaGTTTTCATTCCGGATAAAT +
Preference number: 4 (lower is better)
Translates to: CARILICRSWFFGMVNLFPTKYS*FSFRIN
Trigger: ATTTATCCGGAATGAAAAGCAACTATACTTGGTTGG...GAACAGATTTACCATCCCGAAGAACCAACTCCTACAAATGAGAATTCTTGCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp GAAGATATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTCCAACCAAGTATAGTTaGTTTTCATTCCGGATAAAT +
Preference number: 4 (lower is better)
Translates to: EDMKAGLQECVSEVLEISPTKYS*FSFRIN
Trigger: ATTTATCCGGAATGAAAAGCAACTATACTTGGTTGG...AGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCATATCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp TGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTAGGATTCTTTCTTTGTaGTGTTGGATGAAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: CMLHEGKGFCLFYYLPSSRILSL*CWMKVL
Trigger: CAAGACTTTCATCCAACAGCACAAAGAAAGAATCCT...AGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp ATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGATTCCATCTTCCTGTTTaGACATCTTATAGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: MNVCFMKAKAFVCFIICRFHLPV*TSYSSH
Trigger: GTGGGAACTATAAGATGTGCAAACAGGAAGATGGAA...TCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACATTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp ATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTCCGTCTACTGCATTaGATTTATAATCTGGAGACT +
Preference number: 4 (lower is better)
Translates to: MNVCFMKAKAFVCFIICRVRLLH*IYNLET
Trigger: AGTCTCCAGATTATAAATCCAATGCAGTAGACGGAC...TCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACATTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp AGAATTCTCATTTGTAGGAGTTGGTTCTTCGGGATGGTAAATCTGTTCATTGTGAAGCATCTGAAGTACTaGTATCCAACAGTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: RILICRSWFFGMVNLFIVKHLKY*YPTVSK
Trigger: CTTTGAAACTGTTGGATACCAGTACTTCAGATGCTT...CACAATGAACAGATTTACCATCCCGAAGAACCAACTCCTACAAATGAGAATTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp ATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGATACAATCTCTGAAATaGTGTAATTGTCAGGACTTC +
Preference number: 4 (lower is better)
Translates to: MKAKAFVCFIICRVLRTLIQSLK*CNCQDF
Trigger: GAAGTCCTGACAATTACACCATTTCAGAGATTGTAT...CAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp TGTGCAAGAATTCTCATTTGTAGGAGTTGGTTCTTCGGGATGGTAAATCTGTTCATACAATCTCTGAAATaGTGTAATTGTCAGGACTTC +
Preference number: 4 (lower is better)
Translates to: CARILICRSWFFGMVNLFIQSLK*CNCQDF
Trigger: GAAGTCCTGACAATTACACCATTTCAGAGATTGTAT...GAACAGATTTACCATCCCGAAGAACCAACTCCTACAAATGAGAATTCTTGCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp TTTTTGTCAGTAACTTTGAGCATGCCAGTCTGCTGTTTGTGCAAGAATTCTCATCTTTCTTTGTGCTGTTaGATGAAAGTCTTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: FLSVTLSMPVCCLCKNSHLSLCC*MKVLSF
Trigger: AAAGGACAAGACTTTCATCCAACAGCACAAAGAAAG...ATGAGAATTCTTGCACAAACAGCAGACTGGCATGCTCAAAGTTACTGACAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp AAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACGTGTTTCAGAGGTTCTaGAGATTTCTGTTTATTAAC +
Preference number: 4 (lower is better)
Translates to: KGFCLFYYLPSSQDFGQYVFQRF*RFLFIN
Trigger: GTTAATAAACAGAAATCTCCAGAACCTCTGAAACAC...GTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR TCA 90 bp AGAAGTCACATTATTTTTGTACAATGTGAACAGGAGAATTTACGAGACTGCTGTGAGAATGAGCCTTGTTaGTTTTCATTGTGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: RSHIIFVQCEQENLRDCCENEPC*FSLCPR
Trigger: TCTTGGACACAATGAAAATCAACAAGGCTCATTCTC...ACAGCAGTCTCGTAAATTCTCCTGTTCACATTGTACAAAAATAATGTGACTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp TTTGTCAGTAACTTTGAGCATGCCAGTCTGCTGTTTGTGCAAGAATTCTCATTTGTCATCATTGATACATaGTTGTCCATTGTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: FVSNFEHASLLFVQEFSFVIIDT*LSIVFH
Trigger: ATGGAAAACAATGGACAACCATGTATCAATGATGAC...AAATGAGAATTCTTGCACAAACAGCAGACTGGCATGCTCAAAGTTACTGACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CCA 90 bp ATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGACTTTCTTTGTGCTGTTaGATGAAAGTCTTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: MNVCFMKAKAFVCFIICRLSLCC*MKVLSF
Trigger: AAAGGACAAGACTTTCATCCAACAGCACAAAGAAAG...TCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACATTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR GCA 90 bp ATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAAGCGAAATTTATTCTTaGAGTCAGCCTCTTCAATTT +
Preference number: 4 (lower is better)
Translates to: MNVCFMKAKAFVCFIICRSEIYS*SQPLQF
Trigger: AAATTGAAGAGGCTGACTGCAAGAATAAATTTCGCT...TCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACATTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
3UTR CAA 72 bp AAGATGATAATTAAGGATGGGACTCACCCTTCCGTGTaGTATTTTCTCCAAAACAATTATCACCATCAAACA +
Preference number: 4 (lower is better)
Translates to: KMIIKDGTHPSV*YFLQNNYHHQT
Trigger: TGTTTGATGGTGATAATTGTTTTGGAGAAAATACAACACGGAAGGGTGAGTCCCATCCTTAATTATCATCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337836.10
CDS TCA 90 bp CTGAACAGGAGTCCCGTGAGTGCCCATCATCTCCCCTTTCAGCACTaGCCCTCAGAAGCACATATGAGCCATTTTGGCCCTTCCCATGGG +
Preference number: 5 (lower is better)
Translates to: LNRSPVSAHHLPFQH*PSEAHMSHFGPSHG
Trigger: CCCATGGGAAGGGCCAAAATGGCTCATATGTGCTTCTGAGGGTCAGTGCTGAAAGGGGAGATGATGGGCACTCACGGGACTCCTGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473450.1
CDS GCA 90 bp TGCTCTTCCAATCAGCCTCAGGTTGAAGCAGTGCTGGGACTCAGCTaGCCACACCTCCCAGCACAGGAGCAACAAATACTCCACAGTCTG +
Preference number: 5 (lower is better)
Translates to: CSSNQPQVEAVLGLS*PHLPAQEQQILHSL
Trigger: CAGACTGTGGAGTATTTGTTGCTCCTGTGCTGGGAGGTGTGGGCAGCTGAGTCCCAGCACTGCTTCAACCTGAGGCTGATTGGAAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461473.1
CDS-3UTR CAA 90 bp ACGAGACTGCTGTGGAAGTTGGTACCTAGGGGTATGCTACAGGGCGTCATGAGCCAGGCTTGGCCCTTGTaGATCAGAGCATTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: TRLLWKLVPRGMLQGVMSQAWPL*IRAFSR
Trigger: CCTGCTGAATGCTCTGATCAACAAGGGCCAAGCCTG...GCTCATGACGCCCTGTAGCATACCCCTAGGTACCAACTTCCACAGCAGTCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS GCA 90 bp ATCCTGCATGGGCCCAGAGATGATCCTGAACAGGAGTCCCGTGAGTaGCCATCATCTCCCCTTTCAGCACTGACCCTCAGAAGCACATAT +
Preference number: 5 (lower is better)
Translates to: ILHGPRDDPEQESRE*PSSPLSALTLRSTY
Trigger: ATATGTGCTTCTGAGGGTCAGTGCTGAAAGGGGAGATGATGGGCACTCACGGGACTCCTGTTCAGGATCATCTCTGGGCCCATGCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473450.1
CDS CCA 90 bp GTCCCTGAGAGGGTGGGTCGGCCATTATTAGGGCATGGAGCACACTaGCAAGGATCGAACTTGGCTGCATACTCTTGCAAAGCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: VPERVGRPLLGHGAH*QGSNLAAYSCKAFL
Trigger: CAGGAAAGCTTTGCAAGAGTATGCAGCCAAGTTCGATCCTTGCCAGTGTGCTCCATGCCCTAATAATGGCCGACCCACCCTCTCAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000475349.5
ENST00000511470.1
CDS-3UTR CAA 90 bp ACGAGACTGCTGTGGAAGTTGGTACCTAGGGGTATGCTACAGGGCGTCATGAGCAGTTGGTTTCCACCCTaGAAGCACTGTGGGGGCAAT +
Preference number: 5 (lower is better)
Translates to: TRLLWKLVPRGMLQGVMSSWFPP*KHCGGN
Trigger: ATTGCCCCCACAGTGCTTCAAGGGTGGAAACCAACT...GCTCATGACGCCCTGTAGCATACCCCTAGGTACCAACTTCCACAGCAGTCTCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS GCA 90 bp GGGCATGGAGCACACTGGCAAGGATCGAACTTGGCTGCATACTCTTaGAAAGCTTTCCTGAGGTTGTTCCGTTTTGTCACTGCACAGGGG +
Preference number: 5 (lower is better)
Translates to: GHGAHWQGSNLAAYS*KAFLRLFRFVTAQG
Trigger: CCCCTGTGCAGTGACAAAACGGAACAACCTCAGGAAAGCTTTGCAAGAGTATGCAGCCAAGTTCGATCCTTGCCAGTGTGCTCCATGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000475349.5
ENST00000511470.1
CDS-3UTR CAA 90 bp GGGTATGCTACAGGGCGTCATGAGCTGGAACTGAATAAGACATGCCCAAACAGGATCACAGAAGCAGGCTaGGCCCTTGTTGATCAGAGC +
Preference number: 5 (lower is better)
Translates to: GYATGRHELELNKTCPNRITEAG*ALVDQS
Trigger: GCTCTGATCAACAAGGGCCAAGCCTGCTTCTGTGAT...CCTGTTTGGGCATGTCTTATTCAGTTCCAGCTCATGACGCCCTGTAGCATACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS GCA 90 bp CTCAGAAAATGTCTTCTCCTCCAGACCAGAGCTCCCTTTCTCCCATaGCAAAGCTGCTCCATATTCACTCCTTCCACCTCGAATCAGGGA +
Preference number: 5 (lower is better)
Translates to: LRKCLLLQTRAPFLP*QSCSIFTPSTSNQG
Trigger: TCCCTGATTCGAGGTGGAAGGAGTGAATATGGAGCAGCTTTGGCATGGGAGAAAGGGAGCTCTGGTCTGGAGGAGAAGACATTTTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000473450.1
ENST00000475349.5
CDS CCA 90 bp GTCTGTGTCTGCTCTGGGTTCCAGAATTGCAAGTTTTTGAGCAGCTaGTCCACTGAGTCCATGCATAGTGATCACAGAAGCAGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: VCVCSGFQNCKFLSS*STESMHSDHRSRLG
Trigger: GCCAAGCCTGCTTCTGTGATCACTATGCATGGACTCAGTGGACCAGCTGCTCAAAAACTTGCAATTCTGGAACCCAGAGCAGACACAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000417809.1
CDS CCA 90 bp CTTAGATGGAATGCATGGTTGAAAGGCTACCAGAGGCGCAGTGCATaGCTGTCCCCCAAACTGACTGGGACGCAAGACAGATCTAACTTT +
Preference number: 5 (lower is better)
Translates to: LRWNAWLKGYQRRSA*LSPKLTGTQDRSNF
Trigger: AAAGTTAGATCTGTCTTGCGTCCCAGTCAGTTTGGGGGACAGCCATGCACTGCGCCTCTGGTAGCCTTTCAACCATGCATTCCATCTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000417809.1
CDS CCA 90 bp CTTGCAGTCAGCCTCTTCAATTTTGCAGAGCTTAGATGGAATGCATaGTTGAAAGGCTACCAGAGGCGCAGTGCATGGCTGTCCCCCAAA +
Preference number: 5 (lower is better)
Translates to: LAVSLFNFAELRWNA*LKGYQRRSAWLSPK
Trigger: TTTGGGGGACAGCCATGCACTGCGCCTCTGGTAGCCTTTCAACCATGCATTCCATCTAAGCTCTGCAAAATTGAAGAGGCTGACTGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp ACGAGACTGCTGTGGAAGTTGGTACCTAGGGGTATGCTACAGGGCGTCATGAGCTCAGCCTCTTCAATTTaGCAGAGCTTAGATGGAATG +
Preference number: 5 (lower is better)
Translates to: TRLLWKLVPRGMLQGVMSSASSI*QSLDGM
Trigger: CATTCCATCTAAGCTCTGCAAAATTGAAGAGGCTGA...GCTCATGACGCCCTGTAGCATACCCCTAGGTACCAACTTCCACAGCAGTCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp ACGAGACTGCTGTGGAAGTTGGTACCTAGGGGTATGCTACAGGGCGTCATGAGCTGTTGGATGAAAGTCTaGTCCTTTCAAGACCCCATT +
Preference number: 5 (lower is better)
Translates to: TRLLWKLVPRGMLQGVMSCWMKV*SFQDPI
Trigger: AATGGGGTCTTGAAAGGACAAGACTTTCATCCAACA...GCTCATGACGCCCTGTAGCATACCCCTAGGTACCAACTTCCACAGCAGTCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS GCA 90 bp GACCATGGTCCAAAATCTCCCAGGAGGCAGTTGATGGGGCATCTTTaGCAGTTACATTCTCTAGTCTCCTGCTTGCTGCAAATCTGTTCA +
Preference number: 5 (lower is better)
Translates to: DHGPKSPRRQLMGHL*QLHSLVSCLLQICS
Trigger: TGAACAGATTTGCAGCAAGCAGGAGACTAGAGAATGTAACTGGCAAAGATGCCCCATCAACTGCCTCCTGGGAGATTTTGGACCATGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000417809.1
CDS GCA 90 bp GCCATTATTAGGGCATGGAGCACACTGGCAAGGATCGAACTTGGCTaGATACTCTTGCAAAGCTTTCCTGAGGTTGTTCCGTTTTGTCAC +
Preference number: 5 (lower is better)
Translates to: AIIRAWSTLARIELG*ILLQSFPEVVPFCH
Trigger: GTGACAAAACGGAACAACCTCAGGAAAGCTTTGCAAGAGTATGCAGCCAAGTTCGATCCTTGCCAGTGTGCTCCATGCCCTAATAATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000475349.5
ENST00000511470.1
CDS-3UTR CAA 90 bp TGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTGCGTCTGGCCATGCCTaGAGAGCCTCCAGGCCTATG +
Preference number: 5 (lower is better)
Translates to: CMLHEGKGFCLFYYLPSSASGHA*RASRPM
Trigger: CATAGGCCTGGAGGCTCTCAAGGCATGGCCAGACGC...AGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263413.7
CDS-3UTR CAA 90 bp TCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATCCTGTCTCCCAGGAGGCAGTaGATGGGGCATCTTTGCCAG +
Preference number: 5 (lower is better)
Translates to: SVLLSAEFSGLWSVLDILSPRRQ*MGHLCQ
Trigger: CTGGCAAAGATGCCCCATCAACTGCCTCCTGGGAGA...CAGGATGTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp GGGTATGCTACAGGGCGTCATGAGCTGGAACTGAATAAGACATGCCCAAACAGGCTTTTTGTGAGAGGCTaGAATGGCTTGTTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: GYATGRHELELNKTCPNRLFVRG*NGLFEG
Trigger: GCCTTCAAACAAGCCATTCAAGCCTCTCACAAAAAG...CCTGTTTGGGCATGTCTTATTCAGTTCCAGCTCATGACGCCCTGTAGCATACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp TGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTGCGTCTGGCCATGCCTaGAGAGCCTCCAGGCCCTTT +
Preference number: 5 (lower is better)
Translates to: CMLHEGKGFCLFYYLPSSASGHA*RASRPF
Trigger: AAAGGGCCTGGAGGCTCTCAAGGCATGGCCAGACGC...AGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337836.10
CDS TCA 90 bp ACTGGCAAGGATCGAACTTGGCTGCATACTCTTGCAAAGCTTTCCTaGGGTTGTTCCGTTTTGTCACTGCACAGGGGATGTTTCTTACCA +
Preference number: 5 (lower is better)
Translates to: TGKDRTWLHTLAKLS*GCSVLSLHRGCFLP
Trigger: TGGTAAGAAACATCCCCTGTGCAGTGACAAAACGGAACAACCTCAGGAAAGCTTTGCAAGAGTATGCAGCCAAGTTCGATCCTTGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000475349.5
ENST00000511470.1
CDS-3UTR CAA 90 bp CTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACTCTCCCAGGAGGCAGTaGATGGGGCATCTTTGCCAG +
Preference number: 5 (lower is better)
Translates to: LLSVLLSAEFSGLWSVLDSPRRQ*MGHLCQ
Trigger: CTGGCAAAGATGCCCCATCAACTGCCTCCTGGGAGA...GTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp TTTTTGTCAGTAACTTTGAGCATGCCAGTCTGCTGTTTGTGCAAGAATTCTCATGCATTCCACATCCCCTaGTCTCCAGGTCCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: FLSVTLSMPVCCLCKNSHAFHIP*SPGPVW
Trigger: CCAGACGGGACCTGGAGACAAGGGGATGTGGAATGC...ATGAGAATTCTTGCACAAACAGCAGACTGGCATGCTCAAAGTTACTGACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp TGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTGCATTCCACATCCCCTaGTCTCCAGGTCCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: CMLHEGKGFCLFYYLPSSAFHIP*SPGPVW
Trigger: CCAGACGGGACCTGGAGACAAGGGGATGTGGAATGC...AGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp TTTGTGTGTCTACCCCTGAATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTGATGCACTCCGTCCGTaGGCATTCCACATCCCCTTG +
Preference number: 5 (lower is better)
Translates to: FVCLPLNECMLHEGKGFCDALRP*AFHIPL
Trigger: CAAGGGGATGTGGAATGCCAACGGACGGAGTGCATC...ACAAAAGCCTTTGCCTTCATGAAGCATACATTCATTCAGGGGTAGACACACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS TCA 90 bp AGTTGCTTTTCATTCCGGATAAATCCATTTTCTGGAGGAACTGGCTaGGGACACCCGGAATCTGCTTCTATCTCAGGAAGATCGACCTCT +
Preference number: 5 (lower is better)
Translates to: SCFSFRINPFSGGTG*GHPESASISGRSTS
Trigger: AGAGGTCGATCTTCCTGAGATAGAAGCAGATTCCGGGTGTCCTCAGCCAGTTCCTCCAGAAAATGGATTTATCCGGAATGAAAAGCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000511470.1
CDS-3UTR CAA 90 bp TCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATCCTGAGATGGAATGCATGGTaGAAAGGCTACCAGAGGCGC +
Preference number: 5 (lower is better)
Translates to: SVLLSAEFSGLWSVLDILRWNAW*KGYQRR
Trigger: GCGCCTCTGGTAGCCTTTCAACCATGCATTCCATCT...CAGGATGTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp AAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCCCGACATTTTCCAGATaGGCCGGAACACGGTATGGA +
Preference number: 5 (lower is better)
Translates to: KAKAFVCFIICRVLRTLVPTFSR*AGTRYG
Trigger: TCCATACCGTGTTCCGGCCAATCTGGAAAATGTCGG...GACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp TCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATCCTGCCGACATTTTCCAGATaGGCCGGAACACGGTATGGA +
Preference number: 5 (lower is better)
Translates to: SVLLSAEFSGLWSVLDILPTFSR*AGTRYG
Trigger: TCCATACCGTGTTCCGGCCAATCTGGAAAATGTCGG...CAGGATGTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp TTTGTGTGTCTACCCCTGAATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTTGTGCAGTCTTCCTCTaGTCGCTTCTCCCCCTCACA +
Preference number: 5 (lower is better)
Translates to: FVCLPLNECMLHEGKGFCCAVFL*SLLPLT
Trigger: TGTGAGGGGGAGAAGCGACAAGAGGAAGACTGCACA...ACAAAAGCCTTTGCCTTCATGAAGCATACATTCATTCAGGGGTAGACACACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS TCA 90 bp TACTATTTGTCTGTGTCTGCTCTGGGTTCCAGAATTGCAAGTTTTTaGGCAGCTGGTCCACTGAGTCCATGCATAGTGATCACAGAAGCA +
Preference number: 5 (lower is better)
Translates to: YYLSVSALGSRIASF*AAGPLSPCIVITEA
Trigger: TGCTTCTGTGATCACTATGCATGGACTCAGTGGACCAGCTGCTCAAAAACTTGCAATTCTGGAACCCAGAGCAGACACAGACAAATAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000417809.1
CDS GCA 90 bp GATAAATCCATTTTCTGGAGGAACTGGCTGAGGACACCCGGAATCTaGTTCTATCTCAGGAAGATCGACCTCTTTCATTTCTTCGTCATC +
Preference number: 5 (lower is better)
Translates to: DKSIFWRNWLRTPGI*FYLRKIDLFHFFVI
Trigger: GATGACGAAGAAATGAAAGAGGTCGATCTTCCTGAGATAGAAGCAGATTCCGGGTGTCCTCAGCCAGTTCCTCCAGAAAATGGATTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000511470.1
CDS CCA 90 bp AAATTTATTCTTGCAGTCAGCCTCTTCAATTTTGCAGAGCTTAGATaGAATGCATGGTTGAAAGGCTACCAGAGGCGCAGTGCATGGCTG +
Preference number: 5 (lower is better)
Translates to: KFILAVSLFNFAELR*NAWLKGYQRRSAWL
Trigger: CAGCCATGCACTGCGCCTCTGGTAGCCTTTCAACCATGCATTCCATCTAAGCTCTGCAAAATTGAAGAGGCTGACTGCAAGAATAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS CCA 90 bp ACATCCCCTTGTCTCCAGGTCCCGTCTGGTAAGCATCTGAAGTACTaGTATCCAACAGTTTCAAAGCCAGTAAGGCATGAAATTTCAACA +
Preference number: 5 (lower is better)
Translates to: TSPCLQVPSGKHLKY*YPTVSKPVRHEIST
Trigger: TGTTGAAATTTCATGCCTTACTGGCTTTGAAACTGTTGGATACCAGTACTTCAGATGCTTACCAGACGGGACCTGGAGACAAGGGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000461473.1
CDS-3UTR CAA 90 bp ATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTGTTTATCAGGCTTGGCCCTTGTaGATCAGAGCATTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: MKAGLQECVSEVLEISVYQAWPL*IRAFSR
Trigger: CCTGCTGAATGCTCTGATCAACAAGGGCCAAGCCTG...ATAAACAGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp ATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGATCACAGAAGCAGGCTaGGCCCTTGTTGATCAGAGC +
Preference number: 5 (lower is better)
Translates to: MKAKAFVCFIICRVLRTLITEAG*ALVDQS
Trigger: GCTCTGATCAACAAGGGCCAAGCCTGCTTCTGTGAT...CAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp TTTGTGTGTCTACCCCTGAATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTAGATGGAATGCATGGTaGAAAGGCTACCAGAGGCGC +
Preference number: 5 (lower is better)
Translates to: FVCLPLNECMLHEGKGFCRWNAW*KGYQRR
Trigger: GCGCCTCTGGTAGCCTTTCAACCATGCATTCCATCT...ACAAAAGCCTTTGCCTTCATGAAGCATACATTCATTCAGGGGTAGACACACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp ATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTGTTTATTGTGCAGTCTTCCTCTaGTCGCTTCTCCCCCTCACA +
Preference number: 5 (lower is better)
Translates to: MKAGLQECVSEVLEISVYCAVFL*SLLPLT
Trigger: TGTGAGGGGGAGAAGCGACAAGAGGAAGACTGCACA...ATAAACAGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp AAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACCCTGGCATGTGTACCTaGATGGCCCAGCAACAACAA +
Preference number: 5 (lower is better)
Translates to: KGFCLFYYLPSSQDFGQYPGMCT*MAQQQQ
Trigger: TTGTTGTTGCTGGGCCATCAAGGTACACATGCCAGG...GTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp CATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTCCTGGCATGTGTACCTaGATGGCCCAGCAACAACAA +
Preference number: 5 (lower is better)
Translates to: HEGKGFCLFYYLPSSQDFPGMCT*MAQQQQ
Trigger: TTGTTGTTGCTGGGCCATCAAGGTACACATGCCAGG...AAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp ACAGGAGAATTTACGAGACTGCTGTGGAAGTTGGTACCTAGGGGTATGCTACAGTGTTGGATGAAAGTCTaGTCCTTTCAAGACCCCATT +
Preference number: 5 (lower is better)
Translates to: TGEFTRLLWKLVPRGMLQCWMKV*SFQDPI
Trigger: AATGGGGTCTTGAAAGGACAAGACTTTCATCCAACA...CTGTAGCATACCCCTAGGTACCAACTTCCACAGCAGTCTCGTAAATTCTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp TTGAATGAAGATATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGAGTTGGTTTCCACCCTaGAAGCACTGTGGGGGCAAT +
Preference number: 5 (lower is better)
Translates to: LNEDMKAGLQECVSEVLESWFPP*KHCGGN
Trigger: ATTGCCCCCACAGTGCTTCAAGGGTGGAAACCAACT...CTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCATATCTTCATTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp TCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATCCTGAGACTGCTGTGGAAGTaGGTACCTAGGGGTATGCTA +
Preference number: 5 (lower is better)
Translates to: SVLLSAEFSGLWSVLDILRLLWK*VPRGML
Trigger: TAGCATACCCCTAGGTACCAACTTCCACAGCAGTCT...CAGGATGTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp TTTGTCAGTAACTTTGAGCATGCCAGTCTGCTGTTTGTGCAAGAATTCTCATTTAAGCAGGCTTGGCCCTaGTTGATCAGAGCATTCAGC +
Preference number: 5 (lower is better)
Translates to: FVSNFEHASLLFVQEFSFKQAWP*LIRAFS
Trigger: GCTGAATGCTCTGATCAACAAGGGCCAAGCCTGCTT...AAATGAGAATTCTTGCACAAACAGCAGACTGGCATGCTCAAAGTTACTGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp AAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCCAGAATTGCAAGTTTTaGAGCAGCTGGTCCACTGAG +
Preference number: 5 (lower is better)
Translates to: KAKAFVCFIICRVLRTLVQNCKF*SSWSTE
Trigger: CTCAGTGGACCAGCTGCTCAAAAACTTGCAATTCTG...GACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp ACAGGAGAATTTACGAGACTGCTGTGGAAGTTGGTACCTAGGGGTATGCTACAGCAGCGAAATTTATTCTaGCAGTCAGCCTCTTCAATT +
Preference number: 5 (lower is better)
Translates to: TGEFTRLLWKLVPRGMLQQRNLF*QSASSI
Trigger: AATTGAAGAGGCTGACTGCAAGAATAAATTTCGCTG...CTGTAGCATACCCCTAGGTACCAACTTCCACAGCAGTCTCGTAAATTCTCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp TCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATCCTGCTTGGCTGCATACTCTaGCAAAGCTTTCCTGAGGTT +
Preference number: 5 (lower is better)
Translates to: SVLLSAEFSGLWSVLDILLGCIL*QSFPEV
Trigger: AACCTCAGGAAAGCTTTGCAAGAGTATGCAGCCAAG...CAGGATGTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp AAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCTGGCAAGGATCGAACTaGGCTGCATACTCTTGCAAA +
Preference number: 5 (lower is better)
Translates to: KAKAFVCFIICRVLRTLVWQGSN*AAYSCK
Trigger: TTTGCAAGAGTATGCAGCCAAGTTCGATCCTTGCCA...GACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS GCA 90 bp ACTTATCTACTACTATTTGTCTGTGTCTGCTCTGGGTTCCAGAATTaGAAGTTTTTGAGCAGCTGGTCCACTGAGTCCATGCATAGTGAT +
Preference number: 5 (lower is better)
Translates to: TYLLLFVCVCSGFQN*KFLSSWSTESMHSD
Trigger: ATCACTATGCATGGACTCAGTGGACCAGCTGCTCAAAAACTTGCAATTCTGGAACCCAGAGCAGACACAGACAAATAGTAGTAGATAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000417809.1
CDS GCA 90 bp TTTCCCAGTCATAGCAGGTGTCATAGCCACAGGATTCTTTCTTTGTaGTGTTGGATGAAAGTCTTGTCCTTTCAAGACCCCATTCTAACT +
Preference number: 5 (lower is better)
Translates to: FPSHSRCHSHRILSL*CWMKVLSFQDPILT
Trigger: AGTTAGAATGGGGTCTTGAAAGGACAAGACTTTCATCCAACAGCACAAAGAAAGAATCCTGTGGCTATGACACCTGCTATGACTGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp ACAGGAGAATTTACGAGACTGCTGTGGAAGTTGGTACCTAGGGGTATGCTACAGCTATGCATCTATGACTaGAAGAAATACCAGCAGATA +
Preference number: 5 (lower is better)
Translates to: TGEFTRLLWKLVPRGMLQLCIYD*KKYQQI
Trigger: TATCTGCTGGTATTTCTTCAAGTCATAGATGCATAG...CTGTAGCATACCCCTAGGTACCAACTTCCACAGCAGTCTCGTAAATTCTCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263413.7
CDS-3UTR CAA 90 bp CTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACCAGAATTGCAAGTTTTaGAGCAGCTGGTCCACTGAG +
Preference number: 5 (lower is better)
Translates to: LLSVLLSAEFSGLWSVLDQNCKF*SSWSTE
Trigger: CTCAGTGGACCAGCTGCTCAAAAACTTGCAATTCTG...GTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp TCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATCCTGCTTTTTGTGAGAGGCTaGAATGGCTTGTTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: SVLLSAEFSGLWSVLDILLFVRG*NGLFEG
Trigger: GCCTTCAAACAAGCCATTCAAGCCTCTCACAAAAAG...CAGGATGTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp CTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATCCTGTATCCTGACACAGTGTTaGGCTTCTTCCTCGGTTAAA +
Preference number: 5 (lower is better)
Translates to: LFYYLPSSQDFGQYLTSCILTQC*ASSSVK
Trigger: TTTAACCGAGGAAGAAGCCAAACACTGTGTCAGGAT...ACAGGATGTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp TTGAATGAAGATATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGCTTGGCTGCATACTCTaGCAAAGCTTTCCTGAGGTT +
Preference number: 5 (lower is better)
Translates to: LNEDMKAGLQECVSEVLELGCIL*QSFPEV
Trigger: AACCTCAGGAAAGCTTTGCAAGAGTATGCAGCCAAG...CTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCATATCTTCATTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp TTGAATGAAGATATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGGCAACAACAAAGCCTTaGGGGCAAGTTAGCTCAATG +
Preference number: 5 (lower is better)
Translates to: LNEDMKAGLQECVSEVLEATTKP*GQVSSM
Trigger: CATTGAGCTAACTTGCCCCAAAGGCTTTGTTGTTGC...CTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCATATCTTCATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp AAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAATAGGCAGACACATTaGGAAGTGGAGGCTGAACAT +
Preference number: 5 (lower is better)
Translates to: KAKAFVCFIICRVLRTLVNRQTH*EVEAEH
Trigger: ATGTTCAGCCTCCACTTCCAAATGTGTCTGCCTATT...GACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp AAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCTTTGACACAGTAGAGTaGGTTTCCACCCTTGAAGCA +
Preference number: 5 (lower is better)
Translates to: KAKAFVCFIICRVLRTLVFDTVE*VSTLEA
Trigger: TGCTTCAAGGGTGGAAACCAACTCTACTGTGTCAAA...GACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp ACAGGAGAATTTACGAGACTGCTGTGGAAGTTGGTACCTAGGGGTATGCTACAGAAGCTTCTTTTCTTATaGCTAGCTAACACAAGGCAA +
Preference number: 5 (lower is better)
Translates to: TGEFTRLLWKLVPRGMLQKLLFL*LANTRQ
Trigger: TTGCCTTGTGTTAGCTAGCAATAAGAAAAGAAGCTT...CTGTAGCATACCCCTAGGTACCAACTTCCACAGCAGTCTCGTAAATTCTCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337836.10
CDS TCA 90 bp TGGCGGCCGTCTTGGCAGGAACCAATATGTAGAAAATGGAGTTGCTaGTTATTTAAACATTTCTCAGCCAAAAACTTACAAGCGGGTGAA +
Preference number: 5 (lower is better)
Translates to: WRPSWQEPICRKWSC*LFKHFSAKNLQAGE
Trigger: TTCACCCGCTTGTAAGTTTTTGGCTGAGAAATGTTTAAATAATCAGCAACTCCATTTTCTACATATTGGTTCCTGCCAAGACGGCCGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp CTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATCCTGACACAGTGTTaGGCTTCTTCCTCGGTTAAA +
Preference number: 5 (lower is better)
Translates to: LLSVLLSAEFSGLWSVLDILTQC*ASSSVK
Trigger: TTTAACCGAGGAAGAAGCCAAACACTGTGTCAGGAT...GTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp ATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGATTCTCTGACAGCTTGTaGGTGGTGCACCTATGTTCC +
Preference number: 5 (lower is better)
Translates to: MNVCFMKAKAFVCFIICRFSDSL*VVHLCS
Trigger: GGAACATAGGTGCACCACCAACAAGCTGTCAGAGAA...TCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp AAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACAAAGCTTTCCTGAGGTaGTTCCGTTTTGTCACTGCA +
Preference number: 5 (lower is better)
Translates to: KGFCLFYYLPSSQDFGQYKAFLR*FRFVTA
Trigger: TGCAGTGACAAAACGGAACAACCTCAGGAAAGCTTT...GTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp TTTGTCAGTAACTTTGAGCATGCCAGTCTGCTGTTTGTGCAAGAATTCTCATTTTGGCAAGGATCGAACTaGGCTGCATACTCTTGCAAA +
Preference number: 5 (lower is better)
Translates to: FVSNFEHASLLFVQEFSFWQGSN*AAYSCK
Trigger: TTTGCAAGAGTATGCAGCCAAGTTCGATCCTTGCCA...AAATGAGAATTCTTGCACAAACAGCAGACTGGCATGCTCAAAGTTACTGACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp ATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTGTTTATGCAACAACAAAGCCTTaGGGGCAAGTTAGCTCAATG +
Preference number: 5 (lower is better)
Translates to: MKAGLQECVSEVLEISVYATTKP*GQVSSM
Trigger: CATTGAGCTAACTTGCCCCAAAGGCTTTGTTGTTGC...ATAAACAGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp CTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATCCTGTCACAGGATTCTTTCTTaGTGCTGTTGGATGAAAGTC +
Preference number: 5 (lower is better)
Translates to: LFYYLPSSQDFGQYLTSCHRILS*CCWMKV
Trigger: GACTTTCATCCAACAGCACAAAGAAAGAATCCTGTG...ACAGGATGTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp AAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTTGACACAGTAGAGTaGGTTTCCACCCTTGAAGCA +
Preference number: 5 (lower is better)
Translates to: KGFCLFYYLPSSQDFGQYFDTVE*VSTLEA
Trigger: TGCTTCAAGGGTGGAAACCAACTCTACTGTGTCAAA...GTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS GCA 90 bp CTAGGCCAAACACTTTCCAGGATGCAGTATTTCCATCTTCCTGTTTaGACATCTTATAGTTCCCACTTCACAGATGTTCAATGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: LGQTLSRMQYFHLPV*TSYSSHFTDVQCFL
Trigger: GAGAAAACATTGAACATCTGTGAAGTGGGAACTATAAGATGTGCAAACAGGAAGATGGAAATACTGCATCCTGGAAAGTGTTTGGCCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp TTTGTGTGTCTACCCCTGAATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTCTTATCTACTACTATTaGTCTGTGTCTGCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: FVCLPLNECMLHEGKGFCLIYYY*SVSALG
Trigger: ACCCAGAGCAGACACAGACAAATAGTAGTAGATAAG...ACAAAAGCCTTTGCCTTCATGAAGCATACATTCATTCAGGGGTAGACACACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp AGAATTCTCATTTGTAGGAGTTGGTTCTTCGGGATGGTAAATCTGTTCATTGTGGTTGATGGGGCATCTTaGCCAGTTACATTCTCTAGT +
Preference number: 5 (lower is better)
Translates to: RILICRSWFFGMVNLFIVVDGAS*PVTFSS
Trigger: ACTAGAGAATGTAACTGGCAAAGATGCCCCATCAAC...CACAATGAACAGATTTACCATCCCGAAGAACCAACTCCTACAAATGAGAATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp ATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTGTTTATGTTGATGGGGCATCTTaGCCAGTTACATTCTCTAGT +
Preference number: 5 (lower is better)
Translates to: MKAGLQECVSEVLEISVYVDGAS*PVTFSS
Trigger: ACTAGAGAATGTAACTGGCAAAGATGCCCCATCAAC...ATAAACAGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp TTTGTGTGTCTACCCCTGAATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTTCAGCCTCTTCAATTTaGCAGAGCTTAGATGGAATG +
Preference number: 5 (lower is better)
Translates to: FVCLPLNECMLHEGKGFCSASSI*QSLDGM
Trigger: CATTCCATCTAAGCTCTGCAAAATTGAAGAGGCTGA...ACAAAAGCCTTTGCCTTCATGAAGCATACATTCATTCAGGGGTAGACACACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp CATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTAGAGGCTTGAATGGCTaGTTTGAAGGCAGAATTATG +
Preference number: 5 (lower is better)
Translates to: HEGKGFCLFYYLPSSQDFRGLNG*FEGRIM
Trigger: CATAATTCTGCCTTCAAACAAGCCATTCAAGCCTCT...AAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp AGAAGTCACATTATTTTTGTACAATGTGAACAGGAGAATTTACGAGACTGCTGTTTCTCTGACAGCTTGTaGGTGGTGCACCTATGTTCC +
Preference number: 5 (lower is better)
Translates to: RSHIIFVQCEQENLRDCCFSDSL*VVHLCS
Trigger: GGAACATAGGTGCACCACCAACAAGCTGTCAGAGAA...ACAGCAGTCTCGTAAATTCTCCTGTTCACATTGTACAAAAATAATGTGACTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp TTTTTGTCAGTAACTTTGAGCATGCCAGTCTGCTGTTTGTGCAAGAATTCTCATAAAGCTTTCCTGAGGTaGTTCCGTTTTGTCACTGCA +
Preference number: 5 (lower is better)
Translates to: FLSVTLSMPVCCLCKNSHKAFLR*FRFVTA
Trigger: TGCAGTGACAAAACGGAACAACCTCAGGAAAGCTTT...ATGAGAATTCTTGCACAAACAGCAGACTGGCATGCTCAAAGTTACTGACAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp CTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATCCTGTTCTTTCTTTGTGCTGTaGGATGAAAGTCTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: LFYYLPSSQDFGQYLTSCSFFVL*DESLVL
Trigger: AAGGACAAGACTTTCATCCAACAGCACAAAGAAAGA...ACAGGATGTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp TTTTTGTCAGTAACTTTGAGCATGCCAGTCTGCTGTTTGTGCAAGAATTCTCATAATAGGCAGACACATTaGGAAGTGGAGGCTGAACAT +
Preference number: 5 (lower is better)
Translates to: FLSVTLSMPVCCLCKNSHNRQTH*EVEAEH
Trigger: ATGTTCAGCCTCCACTTCCAAATGTGTCTGCCTATT...ATGAGAATTCTTGCACAAACAGCAGACTGGCATGCTCAAAGTTACTGACAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp AAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACATGCCAGTCTGCTGTTaGTGCAAGAATTCTCATTTG +
Preference number: 5 (lower is better)
Translates to: KGFCLFYYLPSSQDFGQYMPVCC*CKNSHL
Trigger: CAAATGAGAATTCTTGCACAAACAGCAGACTGGCAT...GTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS GCA 90 bp GAAGTTTGGATCATTCTTCTGGAAGCTCTTTTTCATTTCCTGACATaGTGGAAACCTGCTAAAGAGAACGTTCACTTTAAGCAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: EVWIILLEALFHFLT*WKPAKENVHFKQSL
Trigger: CAAACTCTGCTTAAAGTGAACGTTCTCTTTAGCAGGTTTCCAGCATGTCAGGAAATGAAAAAGAGCTTCCAGAAGAATGATCCAAACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433294.1
CDS CCA 90 bp GCAATAGCCTCAAGTACATTTCAGCTGTTCCTACTTTTCTGGGACTaGGAAAGAAGTTTGGATCATTCTTCTGGAAGCTCTTTTTCATTT +
Preference number: 5 (lower is better)
Translates to: AIASSTFQLFLLFWD*ERSLDHSSGSSFSF
Trigger: AAATGAAAAAGAGCTTCCAGAAGAATGATCCAAACTTCTTTCCCAGTCCCAGAAAAGTAGGAACAGCTGAAATGTACTTGAGGCTATTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433294.1
CDS-3UTR CAA 90 bp TTGAATGAAGATATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGCAGCGAAATTTATTCTaGCAGTCAGCCTCTTCAATT +
Preference number: 5 (lower is better)
Translates to: LNEDMKAGLQECVSEVLEQRNLF*QSASSI
Trigger: AATTGAAGAGGCTGACTGCAAGAATAAATTTCGCTG...CTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCATATCTTCATTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp AAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCCTTGTCCTACTGCTTTaGACAGTTTTACATATTCCT +
Preference number: 5 (lower is better)
Translates to: KAKAFVCFIICRVLRTLVLVLLL*TVLHIP
Trigger: AGGAATATGTAAAACTGTCAAAAGCAGTAGGACAAG...GACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp ATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTCATCTTCTGCAGTTaGTACCTCAAAGCCGACATT +
Preference number: 5 (lower is better)
Translates to: MNVCFMKAKAFVCFIICRVIFCS*YLKADI
Trigger: AATGTCGGCTTTGAGGTACAAACTGCAGAAGATGAC...TCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACATTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp TTTGTCAGTAACTTTGAGCATGCCAGTCTGCTGTTTGTGCAAGAATTCTCATTTAGAGGCTTGAATGGCTaGTTTGAAGGCAGAATTATG +
Preference number: 5 (lower is better)
Translates to: FVSNFEHASLLFVQEFSFRGLNG*FEGRIM
Trigger: CATAATTCTGCCTTCAAACAAGCCATTCAAGCCTCT...AAATGAGAATTCTTGCACAAACAGCAGACTGGCATGCTCAAAGTTACTGACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp CATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTTCTTTCTTTGTGCTGTaGGATGAAAGTCTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: HEGKGFCLFYYLPSSQDFSFFVL*DESLVL
Trigger: AAGGACAAGACTTTCATCCAACAGCACAAAGAAAGA...AAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp ATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTGTTTATCACAGGATTCTTTCTTaGTGCTGTTGGATGAAAGTC +
Preference number: 5 (lower is better)
Translates to: MKAGLQECVSEVLEISVYHRILS*CCWMKV
Trigger: GACTTTCATCCAACAGCACAAAGAAAGAATCCTGTG...ATAAACAGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp ATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTGTTTATATGCCAGTCTGCTGTTaGTGCAAGAATTCTCATTTG +
Preference number: 5 (lower is better)
Translates to: MKAGLQECVSEVLEISVYMPVCC*CKNSHL
Trigger: CAAATGAGAATTCTTGCACAAACAGCAGACTGGCAT...ATAAACAGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp ATGAAAGCTGGGCTTCAAGAATGTGTTTCAGAGGTTCTGGAGATTTCTGTTTATTTTTTGTCAGTAACTTaGAGCATGCCAGTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: MKAGLQECVSEVLEISVYFLSVT*SMPVCC
Trigger: ACAGCAGACTGGCATGCTCAAAGTTACTGACAAAAA...ATAAACAGAAATCTCCAGAACCTCTGAAACACATTCTTGAAGCCCAGCTTTCAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp ATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGACTTATCTACTACTATTaGTCTGTGTCTGCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: MNVCFMKAKAFVCFIICRLIYYY*SVSALG
Trigger: ACCCAGAGCAGACACAGACAAATAGTAGTAGATAAG...TCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp CTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACCTTGTCCTACTGCTTTaGACAGTTTTACATATTCCT +
Preference number: 5 (lower is better)
Translates to: LLSVLLSAEFSGLWSVLDLVLLL*TVLHIP
Trigger: AGGAATATGTAAAACTGTCAAAAGCAGTAGGACAAG...GTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp CTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGGTCAGTACTTGACATTTCTTCGTCATCATaGATACATGGTTGTCCATTG +
Preference number: 5 (lower is better)
Translates to: LLSVLLSAEFSGLWSVLDISSSS*IHGCPL
Trigger: CAATGGACAACCATGTATCAATGATGACGAAGAAAT...GTCAAGTACTGACCAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp ATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGAGTTCTCAGGACTTTGATTTCTTCGTCATCATaGATACATGGTTGTCCATTG +
Preference number: 5 (lower is better)
Translates to: MKAKAFVCFIICRVLRTLISSSS*IHGCPL
Trigger: CAATGGACAACCATGTATCAATGATGACGAAGAAAT...CAAAGTCCTGAGAACTCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp ATGAATGTATGCTTCATGAAGGCAAAGGCTTTTGTCTGTTTTATTATCTGCCGATTTTTGTCAGTAACTTaGAGCATGCCAGTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: MNVCFMKAKAFVCFIICRFLSVT*SMPVCC
Trigger: ACAGCAGACTGGCATGCTCAAAGTTACTGACAAAAA...TCGGCAGATAATAAAACAGACAAAAGCCTTTGCCTTCATGAAGCATACATTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS-3UTR CAA 90 bp TTTTTGTCAGTAACTTTGAGCATGCCAGTCTGCTGTTTGTGCAAGAATTCTCATACTCACCCTTCCGTGTaGTATTTTCTCCAAAACAAT +
Preference number: 5 (lower is better)
Translates to: FLSVTLSMPVCCLCKNSHTHPSV*YFLQNN
Trigger: ATTGTTTTGGAGAAAATACAACACGGAAGGGTGAGT...ATGAGAATTCTTGCACAAACAGCAGACTGGCATGCTCAAAGTTACTGACAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337836.10
CDS GCA 90 bp TCTAGAGGCAGATGGTTAAGTGCTTTCAAAAAGACATCAGAAAGGTaGAGATCTTTAGCTTTCGTTGTGAAGTTTAAGACTTTCATCACT +
Preference number: 5 (lower is better)
Translates to: SRGRWLSAFKKTSER*RSLAFVVKFKTFIT
Trigger: AGTGATGAAAGTCTTAAACTTCACAACGAAAGCTAAAGATCTGCACCTTTCTGATGTCTTTTTGAAAGCACTTAACCATCTGCCTCTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000475349.5
CDS GCA 90 bp TGTTTCCAAAAAGAATCAATTCAGCTTTCAAGTGGCACACAGCCTTaGTCTATCACTACAGGTTTGAAATTGTCAATGATCTTATGCAAG +
Preference number: 5 (lower is better)
Translates to: CFQKESIQLSSGTQP*SITTGLKLSMILCK
Trigger: CTTGCATAAGATCATTGACAATTTCAAACCTGTAGTGATAGAGCAAGGCTGTGTGCCACTTGAAAGCTGAATTGATTCTTTTTGGAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461473.1
CDS CCA 90 bp TACCAGCAGATACTTCAGCACATCAAAATCCAAGTCCAGAGTAACTaGTTTCATATTTCTTATTATGAGCTCTCAGCAGGAATCTTACTA +
Preference number: 5 (lower is better)
Translates to: YQQILQHIKIQVQSN*FHISYYELSAGILL
Trigger: TAGTAAGATTCCTGCTGAGAGCTCATAATAAGAAATATGAAACCAGTTACTCTGGACTTGGATTTTGATGTGCTGAAGTATCTGCTGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263413.7
CDS CCA 90 bp GCAAGGTATACATTGTTTCCAAAAAGAATCAATTCAGCTTTCAAGTaGCACACAGCCTTGCTCTATCACTACAGGTTTGAAATTGTCAAT +
Preference number: 5 (lower is better)
Translates to: ARYTLFPKRINSAFK*HTALLYHYRFEIVN
Trigger: ATTGACAATTTCAAACCTGTAGTGATAGAGCAAGGCTGTGTGCCACTTGAAAGCTGAATTGATTCTTTTTGGAAACAATGTATACCTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461473.1
CDS GCA 72 bp GGGCCCAGAGATGATCCTGAACAGGAGTCCCGTGAGTaGCCATCATCTCCCCTTTCAGCACTGACCCTCAGA +
Preference number: 6 (lower is better)
Translates to: GPRDDPEQESRE*PSSPLSALTLR
Trigger: TCTGAGGGTCAGTGCTGAAAGGGGAGATGATGGGCACTCACGGGACTCCTGTTCAGGATCATCTCTGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473450.1
CDS CCA 72 bp TGTCGCTTCTCCCCCTCACAGCGTTTCCCTCCTCGTTaGGGGGCAGGATTATTGCATTCTCGGGTTCTCGAT +
Preference number: 6 (lower is better)
Translates to: CRFSPSQRFPPR*GAGLLHSRVLD
Trigger: ATCGAGAACCCGAGAATGCAATAATCCTGCCCCCCAACGAGGAGGGAAACGCTGTGAGGGGGAGAAGCGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000511470.1
CDS TCA 72 bp GGGTGGTGTCCAGGAATTCCCCTGGCATGTGTACCTTaGTGGCCCAGCAACAACAAAGCCTTTGGGGCAAGT +
Preference number: 6 (lower is better)
Translates to: GWCPGIPLACVP*WPSNNKAFGAS
Trigger: ACTTGCCCCAAAGGCTTTGTTGTTGCTGGGCCATCAAGGTACACATGCCAGGGGAATTCCTGGACACCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000461473.1
CDS GCA 72 bp ATGGAATGCATGGTTGAAAGGCTACCAGAGGCGCAGTaGATGGCTGTCCCCCAAACTGACTGGGACGCAAGA +
Preference number: 6 (lower is better)
Translates to: MECMVERLPEAQ*MAVPQTDWDAR
Trigger: TCTTGCGTCCCAGTCAGTTTGGGGGACAGCCATGCACTGCGCCTCTGGTAGCCTTTCAACCATGCATTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000417809.1
CDS CCA 72 bp AATGCATGGTTGAAAGGCTACCAGAGGCGCAGTGCATaGCTGTCCCCCAAACTGACTGGGACGCAAGACAGA +
Preference number: 6 (lower is better)
Translates to: NAWLKGYQRRSA*LSPKLTGTQDR
Trigger: TCTGTCTTGCGTCCCAGTCAGTTTGGGGGACAGCCATGCACTGCGCCTCTGGTAGCCTTTCAACCATGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000417809.1
CDS TCA 72 bp GCTACCAGAGGCGCAGTGCATGGCTGTCCCCCAAACTaGCTGGGACGCAAGACAGATCTAACTTTAGACTGT +
Preference number: 6 (lower is better)
Translates to: ATRGAVHGCPPN*LGRKTDLTLDC
Trigger: ACAGTCTAAAGTTAGATCTGTCTTGCGTCCCAGTCAGTTTGGGGGACAGCCATGCACTGCGCCTCTGGTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000417809.1
CDS TCA 72 bp AGGATGAAGTACAAGACAGAGCGTCTGGCCATGCCTTaGGAGCCTCCAGGCCCCAACAGATTTCTGAGGATG +
Preference number: 6 (lower is better)
Translates to: RMKYKTERLAMP*EPPGPNRFLRM
Trigger: CATCCTCAGAAATCTGTTGGGGCCTGGAGGCTCTCAAGGCATGGCCAGACGCTCTGTCTTGTACTTCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417809.1
CDS TCA 72 bp AGTCCCGTGAGTGCCCATCATCTCCCCTTTCAGCACTaGCCCTCAGAAGCACATATGAGCCATTTTGGCCCT +
Preference number: 6 (lower is better)
Translates to: SPVSAHHLPFQH*PSEAHMSHFGP
Trigger: AGGGCCAAAATGGCTCATATGTGCTTCTGAGGGTCAGTGCTGAAAGGGGAGATGATGGGCACTCACGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473450.1
CDS GCA 72 bp TGTCTTCTCCTCCAGACCAGAGCTCCCTTTCTCCCATaGCAAAGCTGCTCCATATTCACTCCTTCCACCTCG +
Preference number: 6 (lower is better)
Translates to: CLLLQTRAPFLP*QSCSIFTPSTS
Trigger: CGAGGTGGAAGGAGTGAATATGGAGCAGCTTTGGCATGGGAGAAAGGGAGCTCTGGTCTGGAGGAGAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000473450.1
ENST00000475349.5
CDS CAA 90 bp TCAATGATCTTATGCAAGGAATCTGCTCTTCCAATCAGCCTCAGGTaGAAGCAGTGCTGGGACTCAGCTGCCCACACCTCCCAGCACAGG +
Preference number: 6 (lower is better)
Translates to: SMILCKESALPISLR*KQCWDSAAHTSQHR
Trigger: CCTGTGCTGGGAGGTGTGGGCAGCTGAGTCCCAGCACTGCTTCAACCTGAGGCTGATTGGAAGAGCAGATTCCTTGCATAAGATCATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461473.1
CDS TCA 72 bp ACATATGAGCCATTTTGGCCCTTCCCATGGGGATGGTaGTGTCCTGTCCTTGTTGCCTGCCACTTGTTGCCA +
Preference number: 6 (lower is better)
Translates to: TYEPFWPFPWGW*CPVLVACHLLP
Trigger: TGGCAACAAGTGGCAGGCAACAAGGACAGGACATCACCATCCCCATGGGAAGGGCCAAAATGGCTCATATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473450.1
CDS GCA 72 bp AGGGCATGGAGCACACTGGCAAGGATCGAACTTGGCTaGATACTCTTGCAAAGCTTTCCTGAGGTTGTTCCG +
Preference number: 6 (lower is better)
Translates to: RAWSTLARIELG*ILLQSFPEVVP
Trigger: CGGAACAACCTCAGGAAAGCTTTGCAAGAGTATGCAGCCAAGTTCGATCCTTGCCAGTGTGCTCCATGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000475349.5
ENST00000511470.1
CDS CCA 72 bp AGGGTGGGTCGGCCATTATTAGGGCATGGAGCACACTaGCAAGGATCGAACTTGGCTGCATACTCTTGCAAA +
Preference number: 6 (lower is better)
Translates to: RVGRPLLGHGAH*QGSNLAAYSCK
Trigger: TTTGCAAGAGTATGCAGCCAAGTTCGATCCTTGCCAGTGTGCTCCATGCCCTAATAATGGCCGACCCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000475349.5
ENST00000511470.1
CDS CAA 90 bp GCAGTCAGCCTCTTCAATTTTGCAGAGCTTAGATGGAATGCATGGTaGAAAGGCTACCAGAGGCGCAGTGCATGGCTGTCCCCCAAACTG +
Preference number: 6 (lower is better)
Translates to: AVSLFNFAELRWNAW*KGYQRRSAWLSPKL
Trigger: CAGTTTGGGGGACAGCCATGCACTGCGCCTCTGGTAGCCTTTCAACCATGCATTCCATCTAAGCTCTGCAAAATTGAAGAGGCTGACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS CAA 90 bp AGGGCATGGAGCACACTGGCAAGGATCGAACTTGGCTGCATACTCTaGCAAAGCTTTCCTGAGGTTGTTCCGTTTTGTCACTGCACAGGG +
Preference number: 6 (lower is better)
Translates to: RAWSTLARIELGCIL*QSFPEVVPFCHCTG
Trigger: CCCTGTGCAGTGACAAAACGGAACAACCTCAGGAAAGCTTTGCAAGAGTATGCAGCCAAGTTCGATCCTTGCCAGTGTGCTCCATGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000475349.5
ENST00000511470.1
CDS CAA 90 bp GCAGCTGGTCCACTGAGTCCATGCATAGTGATCACAGAAGCAGGCTaGGCCCTTGTTGATCAGAGCATTCAGCAGGATGAAGTACAAGAC +
Preference number: 6 (lower is better)
Translates to: AAGPLSPCIVITEAG*ALVDQSIQQDEVQD
Trigger: GTCTTGTACTTCATCCTGCTGAATGCTCTGATCAACAAGGGCCAAGCCTGCTTCTGTGATCACTATGCATGGACTCAGTGGACCAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000417809.1
CDS CAA 90 bp CAAGGGTCACAGTCTGACCATGGTCCAAAATCTCCCAGGAGGCAGTaGATGGGGCATCTTTGCCAGTTACATTCTCTAGTCTCCTGCTTG +
Preference number: 6 (lower is better)
Translates to: QGSQSDHGPKSPRRQ*MGHLCQLHSLVSCL
Trigger: CAAGCAGGAGACTAGAGAATGTAACTGGCAAAGATGCCCCATCAACTGCCTCCTGGGAGATTTTGGACCATGGTCAGACTGTGACCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000417809.1
CDS TCA 72 bp GGAGGTGTCCAGGTCTTTTTCACAGGTGAGAGAGTTTaGAATGGGTGGTGTCCAGGAATTCCCCTGGCATGT +
Preference number: 6 (lower is better)
Translates to: GGVQVFFTGERV*NGWCPGIPLAC
Trigger: ACATGCCAGGGGAATTCCTGGACACCACCCATTTCAAACTCTCTCACCTGTGAAAAAGACCTGGACACCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461473.1
CDS CAA 90 bp GGTCGGCCATTATTAGGGCATGGAGCACACTGGCAAGGATCGAACTaGGCTGCATACTCTTGCAAAGCTTTCCTGAGGTTGTTCCGTTTT +
Preference number: 6 (lower is better)
Translates to: GRPLLGHGAHWQGSN*AAYSCKAFLRLFRF
Trigger: AAAACGGAACAACCTCAGGAAAGCTTTGCAAGAGTATGCAGCCAAGTTCGATCCTTGCCAGTGTGCTCCATGCCCTAATAATGGCCGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000475349.5
ENST00000511470.1
CDS GCA 72 bp CCAAAATCTCCCAGGAGGCAGTTGATGGGGCATCTTTaGCAGTTACATTCTCTAGTCTCCTGCTTGCTGCAA +
Preference number: 6 (lower is better)
Translates to: PKSPRRQLMGHL*QLHSLVSCLLQ
Trigger: TTGCAGCAAGCAGGAGACTAGAGAATGTAACTGGCAAAGATGCCCCATCAACTGCCTCCTGGGAGATTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000417809.1
CDS CCA 72 bp AGCCTCTTCAATTTTGCAGAGCTTAGATGGAATGCATaGTTGAAAGGCTACCAGAGGCGCAGTGCATGGCTG +
Preference number: 6 (lower is better)
Translates to: SLFNFAELRWNA*LKGYQRRSAWL
Trigger: CAGCCATGCACTGCGCCTCTGGTAGCCTTTCAACCATGCATTCCATCTAAGCTCTGCAAAATTGAAGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS CCA 72 bp CTGAAATGGTGTAATTGTCAGGACTTCCTGCACAACTaGCTTGATGCACTCCGTCCGTTGGCATTCCACATC +
Preference number: 6 (lower is better)
Translates to: LKWCNCQDFLHN*LDALRPLAFHI
Trigger: GATGTGGAATGCCAACGGACGGAGTGCATCAAGCCAGTTGTGCAGGAAGTCCTGACAATTACACCATTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000461473.1
CDS CAA 72 bp TCCAAAATCTCCCAGGAGGCAGTTGATGGGGCATCTTaGCCAGTTACATTCTCTAGTCTCCTGCTTGCTGCA +
Preference number: 6 (lower is better)
Translates to: SKISQEAVDGAS*PVTFSSLLLAA
Trigger: TGCAGCAAGCAGGAGACTAGAGAATGTAACTGGCAAAGATGCCCCATCAACTGCCTCCTGGGAGATTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000417809.1
CDS CAA 72 bp CAGTCTGACCATGGTCCAAAATCTCCCAGGAGGCAGTaGATGGGGCATCTTTGCCAGTTACATTCTCTAGTC +
Preference number: 6 (lower is better)
Translates to: QSDHGPKSPRRQ*MGHLCQLHSLV
Trigger: GACTAGAGAATGTAACTGGCAAAGATGCCCCATCAACTGCCTCCTGGGAGATTTTGGACCATGGTCAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000417809.1
CDS CAA 72 bp CTCTTCAATTTTGCAGAGCTTAGATGGAATGCATGGTaGAAAGGCTACCAGAGGCGCAGTGCATGGCTGTCC +
Preference number: 6 (lower is better)
Translates to: LFNFAELRWNAW*KGYQRRSAWLS
Trigger: GGACAGCCATGCACTGCGCCTCTGGTAGCCTTTCAACCATGCATTCCATCTAAGCTCTGCAAAATTGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS TCA 72 bp TCTGTGTCTGCTCTGGGTTCCAGAATTGCAAGTTTTTaGGCAGCTGGTCCACTGAGTCCATGCATAGTGATC +
Preference number: 6 (lower is better)
Translates to: SVSALGSRIASF*AAGPLSPCIVI
Trigger: GATCACTATGCATGGACTCAGTGGACCAGCTGCTCAAAAACTTGCAATTCTGGAACCCAGAGCAGACACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000417809.1
CDS TCA 72 bp GATCGAACTTGGCTGCATACTCTTGCAAAGCTTTCCTaGGGTTGTTCCGTTTTGTCACTGCACAGGGGATGT +
Preference number: 6 (lower is better)
Translates to: DRTWLHTLAKLS*GCSVLSLHRGC
Trigger: ACATCCCCTGTGCAGTGACAAAACGGAACAACCTCAGGAAAGCTTTGCAAGAGTATGCAGCCAAGTTCGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000475349.5
ENST00000511470.1
CDS GCA 72 bp TTGCAAAGCTTTCCTGAGGTTGTTCCGTTTTGTCACTaGACAGGGGATGTTTCTTACCAAGTCCACGATGGG +
Preference number: 6 (lower is better)
Translates to: LQSFPEVVPFCH*TGDVSYQVHDG
Trigger: CCCATCGTGGACTTGGTAAGAAACATCCCCTGTGCAGTGACAAAACGGAACAACCTCAGGAAAGCTTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000475349.5
ENST00000511470.1
CDS GCA 72 bp GCACACTGGCAAGGATCGAACTTGGCTGCATACTCTTaGAAAGCTTTCCTGAGGTTGTTCCGTTTTGTCACT +
Preference number: 6 (lower is better)
Translates to: AHWQGSNLAAYS*KAFLRLFRFVT
Trigger: AGTGACAAAACGGAACAACCTCAGGAAAGCTTTGCAAGAGTATGCAGCCAAGTTCGATCCTTGCCAGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000475349.5
ENST00000511470.1
CDS CCA 72 bp TGCTCTGGGTTCCAGAATTGCAAGTTTTTGAGCAGCTaGTCCACTGAGTCCATGCATAGTGATCACAGAAGC +
Preference number: 6 (lower is better)
Translates to: CSGFQNCKFLSS*STESMHSDHRS
Trigger: GCTTCTGTGATCACTATGCATGGACTCAGTGGACCAGCTGCTCAAAAACTTGCAATTCTGGAACCCAGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000417809.1
CDS CCA 72 bp CTTGCAGTCAGCCTCTTCAATTTTGCAGAGCTTAGATaGAATGCATGGTTGAAAGGCTACCAGAGGCGCAGT +
Preference number: 6 (lower is better)
Translates to: LAVSLFNFAELR*NAWLKGYQRRS
Trigger: ACTGCGCCTCTGGTAGCCTTTCAACCATGCATTCCATCTAAGCTCTGCAAAATTGAAGAGGCTGACTGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS CCA 72 bp CTGCAGTTTGTACCTCAAAGCCGACATTTTCCAGATTaGCCGGAACACGGTATGGATTACTTGTCCTACTGC +
Preference number: 6 (lower is better)
Translates to: LQFVPQSRHFPD*PEHGMDYLSYC
Trigger: GCAGTAGGACAAGTAATCCATACCGTGTTCCGGCCAATCTGGAAAATGTCGGCTTTGAGGTACAAACTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS CAA 72 bp GTCTGTGTCTGCTCTGGGTTCCAGAATTGCAAGTTTTaGAGCAGCTGGTCCACTGAGTCCATGCATAGTGAT +
Preference number: 6 (lower is better)
Translates to: VCVCSGFQNCKF*SSWSTESMHSD
Trigger: ATCACTATGCATGGACTCAGTGGACCAGCTGCTCAAAAACTTGCAATTCTGGAACCCAGAGCAGACACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000417809.1
CDS CAA 72 bp AGCACACTGGCAAGGATCGAACTTGGCTGCATACTCTaGCAAAGCTTTCCTGAGGTTGTTCCGTTTTGTCAC +
Preference number: 6 (lower is better)
Translates to: STLARIELGCIL*QSFPEVVPFCH
Trigger: GTGACAAAACGGAACAACCTCAGGAAAGCTTTGCAAGAGTATGCAGCCAAGTTCGATCCTTGCCAGTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000475349.5
ENST00000511470.1
CDS CAA 90 bp CAAGGATCGAACTTGGCTGCATACTCTTGCAAAGCTTTCCTGAGGTaGTTCCGTTTTGTCACTGCACAGGGGATGTTTCTTACCAAGTCC +
Preference number: 6 (lower is better)
Translates to: QGSNLAAYSCKAFLR*FRFVTAQGMFLTKS
Trigger: GGACTTGGTAAGAAACATCCCCTGTGCAGTGACAAAACGGAACAACCTCAGGAAAGCTTTGCAAGAGTATGCAGCCAAGTTCGATCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000475349.5
ENST00000511470.1
CDS CAA 90 bp CTACTATTTGTCTGTGTCTGCTCTGGGTTCCAGAATTGCAAGTTTTaGAGCAGCTGGTCCACTGAGTCCATGCATAGTGATCACAGAAGC +
Preference number: 6 (lower is better)
Translates to: LLFVCVCSGFQNCKF*SSWSTESMHSDHRS
Trigger: GCTTCTGTGATCACTATGCATGGACTCAGTGGACCAGCTGCTCAAAAACTTGCAATTCTGGAACCCAGAGCAGACACAGACAAATAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000417809.1
CDS TCA 72 bp TCATTCCGGATAAATCCATTTTCTGGAGGAACTGGCTaGGGACACCCGGAATCTGCTTCTATCTCAGGAAGA +
Preference number: 6 (lower is better)
Translates to: SFRINPFSGGTG*GHPESASISGR
Trigger: TCTTCCTGAGATAGAAGCAGATTCCGGGTGTCCTCAGCCAGTTCCTCCAGAAAATGGATTTATCCGGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000511470.1
CDS GCA 72 bp CTACTATTTGTCTGTGTCTGCTCTGGGTTCCAGAATTaGAAGTTTTTGAGCAGCTGGTCCACTGAGTCCATG +
Preference number: 6 (lower is better)
Translates to: LLFVCVCSGFQN*KFLSSWSTESM
Trigger: CATGGACTCAGTGGACCAGCTGCTCAAAAACTTGCAATTCTGGAACCCAGAGCAGACACAGACAAATAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000417809.1
CDS GCA 72 bp ATTTTCTGGAGGAACTGGCTGAGGACACCCGGAATCTaGTTCTATCTCAGGAAGATCGACCTCTTTCATTTC +
Preference number: 6 (lower is better)
Translates to: IFWRNWLRTPGI*FYLRKIDLFHF
Trigger: GAAATGAAAGAGGTCGATCTTCCTGAGATAGAAGCAGATTCCGGGTGTCCTCAGCCAGTTCCTCCAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000511470.1
CDS CCA 72 bp CTTTTCATTCCGGATAAATCCATTTTCTGGAGGAACTaGCTGAGGACACCCGGAATCTGCTTCTATCTCAGG +
Preference number: 6 (lower is better)
Translates to: LFIPDKSIFWRN*LRTPGICFYLR
Trigger: CCTGAGATAGAAGCAGATTCCGGGTGTCCTCAGCCAGTTCCTCCAGAAAATGGATTTATCCGGAATGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000511470.1
CDS CCA 72 bp TGTCTCCAGGTCCCGTCTGGTAAGCATCTGAAGTACTaGTATCCAACAGTTTCAAAGCCAGTAAGGCATGAA +
Preference number: 6 (lower is better)
Translates to: CLQVPSGKHLKY*YPTVSKPVRHE
Trigger: TTCATGCCTTACTGGCTTTGAAACTGTTGGATACCAGTACTTCAGATGCTTACCAGACGGGACCTGGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000461473.1
CDS CAA 72 bp TCTGCAGTTTGTACCTCAAAGCCGACATTTTCCAGATaGGCCGGAACACGGTATGGATTACTTGTCCTACTG +
Preference number: 6 (lower is better)
Translates to: SAVCTSKPTFSR*AGTRYGLLVLL
Trigger: CAGTAGGACAAGTAATCCATACCGTGTTCCGGCCAATCTGGAAAATGTCGGCTTTGAGGTACAAACTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS CCA 72 bp GATGAAAGTCTTGTCCTTTCAAGACCCCATTCTAACTaGCGGCCGTCTTGGCAGGAACCAATATGTAGAAAA +
Preference number: 6 (lower is better)
Translates to: DESLVLSRPHSN*RPSWQEPICRK
Trigger: TTTTCTACATATTGGTTCCTGCCAAGACGGCCGCCAGTTAGAATGGGGTCTTGAAAGGACAAGACTTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS CAA 72 bp GCAATGCAGCGGCCACTGTCACAGCGAAATTTATTCTaGCAGTCAGCCTCTTCAATTTTGCAGAGCTTAGAT +
Preference number: 6 (lower is better)
Translates to: AMQRPLSQRNLF*QSASSILQSLD
Trigger: ATCTAAGCTCTGCAAAATTGAAGAGGCTGACTGCAAGAATAAATTTCGCTGTGACAGTGGCCGCTGCATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS CAA 72 bp AACTTGGCTGCATACTCTTGCAAAGCTTTCCTGAGGTaGTTCCGTTTTGTCACTGCACAGGGGATGTTTCTT +
Preference number: 6 (lower is better)
Translates to: NLAAYSCKAFLR*FRFVTAQGMFL
Trigger: AAGAAACATCCCCTGTGCAGTGACAAAACGGAACAACCTCAGGAAAGCTTTGCAAGAGTATGCAGCCAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000475349.5
ENST00000511470.1
CDS CAA 90 bp AACTTTCTGGCAATGCAGCGGCCACTGTCACAGCGAAATTTATTCTaGCAGTCAGCCTCTTCAATTTTGCAGAGCTTAGATGGAATGCAT +
Preference number: 6 (lower is better)
Translates to: NFLAMQRPLSQRNLF*QSASSILQSLDGMH
Trigger: ATGCATTCCATCTAAGCTCTGCAAAATTGAAGAGGCTGACTGCAAGAATAAATTTCGCTGTGACAGTGGCCGCTGCATTGCCAGAAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS TCA 72 bp AACTTTAGACTGTTTTTCAATACAAGGGTCACAGTCTaGCCATGGTCCAAAATCTCCCAGGAGGCAGTTGAT +
Preference number: 6 (lower is better)
Translates to: NFRLFFNTRVTV*PWSKISQEAVD
Trigger: ATCAACTGCCTCCTGGGAGATTTTGGACCATGGTCAGACTGTGACCCTTGTATTGAAAAACAGTCTAAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000417809.1
CDS GCA 72 bp AGGTTTGAAATTGTCAATGATCTTATGCAAGGAATCTaGTCTTCCAATCAGCCTCAGGTTGAAGCAGTGCTG +
Preference number: 6 (lower is better)
Translates to: RFEIVNDLMQGI*SSNQPQVEAVL
Trigger: CAGCACTGCTTCAACCTGAGGCTGATTGGAAGAGCAGATTCCTTGCATAAGATCATTGACAATTTCAAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461473.1
CDS CCA 72 bp AGGTGTCATAGCCACAGGATTCTTTCTTTGTGCTGTTaGATGAAAGTCTTGTCCTTTCAAGACCCCATTCTA +
Preference number: 6 (lower is better)
Translates to: RCHSHRILSLCC*MKVLSFQDPIL
Trigger: TAGAATGGGGTCTTGAAAGGACAAGACTTTCATCCAACAGCACAAAGAAAGAATCCTGTGGCTATGACACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS CAA 72 bp AGTCATAGCAGGTGTCATAGCCACAGGATTCTTTCTTaGTGCTGTTGGATGAAAGTCTTGTCCTTTCAAGAC +
Preference number: 6 (lower is better)
Translates to: SHSRCHSHRILS*CCWMKVLSFQD
Trigger: GTCTTGAAAGGACAAGACTTTCATCCAACAGCACAAAGAAAGAATCCTGTGGCTATGACACCTGCTATGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS CAA 90 bp TCCAGATTGGCCGGAACACGGTATGGATTACTTGTCCTACTGCTTTaGACAGTTTTACATATTCCTCCAGTGAAAGAGTTATCAAGGACT +
Preference number: 6 (lower is better)
Translates to: SRLAGTRYGLLVLLL*TVLHIPPVKELSRT
Trigger: AGTCCTTGATAACTCTTTCACTGGAGGAATATGTAAAACTGTCAAAAGCAGTAGGACAAGTAATCCATACCGTGTTCCGGCCAATCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS CAA 90 bp ATTTTTCCCAGTCATAGCAGGTGTCATAGCCACAGGATTCTTTCTTaGTGCTGTTGGATGAAAGTCTTGTCCTTTCAAGACCCCATTCTA +
Preference number: 6 (lower is better)
Translates to: IFPSHSRCHSHRILS*CCWMKVLSFQDPIL
Trigger: TAGAATGGGGTCTTGAAAGGACAAGACTTTCATCCAACAGCACAAAGAAAGAATCCTGTGGCTATGACACCTGCTATGACTGGGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS CCA 72 bp AGCTGTTCCTACTTTTCTGGGACTGGGAAAGAAGTTTaGATCATTCTTCTGGAAGCTCTTTTTCATTTCCTG +
Preference number: 6 (lower is better)
Translates to: SCSYFSGTGKEV*IILLEALFHFL
Trigger: CAGGAAATGAAAAAGAGCTTCCAGAAGAATGATCCAAACTTCTTTCCCAGTCCCAGAAAAGTAGGAACAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433294.1
CDS CAA 72 bp GCCGGAACACGGTATGGATTACTTGTCCTACTGCTTTaGACAGTTTTACATATTCCTCCAGTGAAAGAGTTA +
Preference number: 6 (lower is better)
Translates to: AGTRYGLLVLLL*TVLHIPPVKEL
Trigger: TAACTCTTTCACTGGAGGAATATGTAAAACTGTCAAAAGCAGTAGGACAAGTAATCCATACCGTGTTCCGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10
CDS CAA 72 bp CAGCTGTTCCTACTTTTCTGGGACTGGGAAAGAAGTTaGGATCATTCTTCTGGAAGCTCTTTTTCATTTCCT +
Preference number: 6 (lower is better)
Translates to: QLFLLFWDWERS*DHSSGSSFSFP
Trigger: AGGAAATGAAAAAGAGCTTCCAGAAGAATGATCCAAACTTCTTTCCCAGTCCCAGAAAAGTAGGAACAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433294.1
CDS CAA 72 bp TCAAGTGGCACACAGCCTTGCTCTATCACTACAGGTTaGAAATTGTCAATGATCTTATGCAAGGAATCTGCT +
Preference number: 6 (lower is better)
Translates to: SSGTQPCSITTG*KLSMILCKESA
Trigger: AGCAGATTCCTTGCATAAGATCATTGACAATTTCAAACCTGTAGTGATAGAGCAAGGCTGTGTGCCACTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461473.1
CDS CAA 72 bp CCAAAGTCATCGAATATTCGGCTGTACAAAGCAGAGTaGTATTCTAGAGGCAGATGGTTAAGTGCTTTCAAA +
Preference number: 6 (lower is better)
Translates to: PKSSNIRLYKAE*YSRGRWLSAFK
Trigger: TTTGAAAGCACTTAACCATCTGCCTCTAGAATACAACTCTGCTTTGTACAGCCGAATATTCGATGACTTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000475349.5
CDS CAA 72 bp AAAACGCGTTTCTTTGTTTCAATCCTGACACAGTGTTaGGCTTCTTCCTCGGTTAAACCTGAGTTCTTTAGT +
Preference number: 6 (lower is better)
Translates to: KTRFFVSILTQC*ASSSVKPEFFS
Trigger: ACTAAAGAACTCAGGTTTAACCGAGGAAGAAGCCAAACACTGTGTCAGGATTGAAACAAAGAAACGCGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000475349.5
CDS GCA 72 bp AAAGAATCAATTCAGCTTTCAAGTGGCACACAGCCTTaGTCTATCACTACAGGTTTGAAATTGTCAATGATC +
Preference number: 6 (lower is better)
Translates to: KESIQLSSGTQP*SITTGLKLSMI
Trigger: GATCATTGACAATTTCAAACCTGTAGTGATAGAGCAAGGCTGTGTGCCACTTGAAAGCTGAATTGATTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461473.1
CDS CCA 72 bp ACATTGTTTCCAAAAAGAATCAATTCAGCTTTCAAGTaGCACACAGCCTTGCTCTATCACTACAGGTTTGAA +
Preference number: 6 (lower is better)
Translates to: TLFPKRINSAFK*HTALLYHYRFE
Trigger: TTCAAACCTGTAGTGATAGAGCAAGGCTGTGTGCCACTTGAAAGCTGAATTGATTCTTTTTGGAAACAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461473.1
CDS CAA 72 bp AAAACGCGTTTCTTTGTTTCAATCCTGACACAGTGTTaGGCTTCTTCCTCGGTTAAACCTATAGATTCAATC +
Preference number: 6 (lower is better)
Translates to: KTRFFVSILTQC*ASSSVKPIDSI
Trigger: GATTGAATCTATAGGTTTAACCGAGGAAGAAGCCAAACACTGTGTCAGGATTGAAACAAAGAAACGCGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473450.1
CDS CAA 72 bp TGTATAAATGAACCTTCATGTTTCTCTGACAGCTTGTaGGTGGTGCACCTATGTTCCACTTTTGTTTTCTTA +
Preference number: 6 (lower is better)
Translates to: CINEPSCFSDSL*VVHLCSTFVFL
Trigger: TAAGAAAACAAAAGTGGAACATAGGTGCACCACCAACAAGCTGTCAGAGAAACATGAAGGTTCATTTATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000473450.1
ENST00000475349.5
CDS CAA 72 bp TCAGGAAGATCGACCTCTTTCATTTCTTCGTCATCATaGATACATGGTTGTCCATTGTTTTCCATGATTGAA +
Preference number: 6 (lower is better)
Translates to: SGRSTSFISSSS*IHGCPLFSMIE
Trigger: TTCAATCATGGAAAACAATGGACAACCATGTATCAATGATGACGAAGAAATGAAAGAGGTCGATCTTCCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263413.7
ENST00000337836.10
ENST00000511470.1
CDS CAA 72 bp AAAAGAATCAATTCAGCTTTCAAGTGGCACACAGCCTaGCTCTATCACTACAGGTTTGAAATTGTCAATGAT +
Preference number: 6 (lower is better)
Translates to: KRINSAFKWHTA*LYHYRFEIVND
Trigger: ATCATTGACAATTTCAAACCTGTAGTGATAGAGCAAGGCTGTGTGCCACTTGAAAGCTGAATTGATTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461473.1
CDS CAA 90 bp TTGTTTCCAAAAAGAATCAATTCAGCTTTCAAGTGGCACACAGCCTaGCTCTATCACTACAGGTTTGAAATTGTCAATGATCTTATGCAA +
Preference number: 6 (lower is better)
Translates to: LFPKRINSAFKWHTA*LYHYRFEIVNDLMQ
Trigger: TTGCATAAGATCATTGACAATTTCAAACCTGTAGTGATAGAGCAAGGCTGTGTGCCACTTGAAAGCTGAATTGATTCTTTTTGGAAACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461473.1
CDS TCA 72 bp CAAATGCATTCAGATCCTGATTGTTTCTGTCCCAGCTaGCAATGGCCTTTTAATTTTGTTAGAGTATCTTTT +
Preference number: 6 (lower is better)
Translates to: QMHSDPDCFCPS*QWPFNFVRVSF
Trigger: AAAAGATACTCTAACAAAATTAAAAGGCCATTGTCAGCTGGGACAGAAACAATCAGGATCTGAATGCATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263413.7
ENST00000337836.10