Pregenerated sensors for C5ORF58 (Homo sapiens)
Ensembl gene IDs: ENSG00000234511Ensembl transcript IDs: ENST00000517575.4, ENST00000518395.2, ENST00000521850.5, ENST00000524171.5
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTCACCTTGAGATTCTAATTATTCTGGGGGTGCTGTGTCAGCTCTaGGAGTCTTCAAACTTCCCAGGTAATTCTAATTTGAAGCCAAGA | + |
|
Preference number: 1 (lower is better) Translates to: SHLEILIILGVLCQL*ESSNFPGNSNLKPR Trigger: TCTTGGCTTCAAATTAGAATTACCTGGGAAGTTTGAAGACTCCCAGAGCTGACACAGCACCCCCAGAATAATTAGAATCTCAAGGTGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| 3UTR TCA 90 bp | CGTACCAGTTCTATCTTCCTCTTAACACAGACGTGCCATCCATGTTaGTGTGAAAGGACCAATATTAAAGAGATGGCAGCAACTTTTTGC | + |
|
Preference number: 1 (lower is better) Translates to: RTSSIFLLTQTCHPC*CERTNIKEMAATFC Trigger: GCAAAAAGTTGCTGCCATCTCTTTAATATTGGTCCTTTCACATCAACATGGATGGCACGTCTGTGTTAAGAGGAAGATAGAACTGGTACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| 3UTR GCA 90 bp | CATCTTTCACACTTAAACTCCACACCAGTAGTTCTCAGTAGTAGTTaGACATTTAGATCACCCGGAGAACTTTTGAAAAATCCCGATTCC | + |
|
Preference number: 1 (lower is better) Translates to: HLSHLNSTPVVLSSS*TFRSPGELLKNPDS Trigger: GGAATCGGGATTTTTCAAAAGTTCTCCGGGTGATCTAAATGTGCAACTACTACTGAGAACTACTGGTGTGGAGTTTAAGTGTGAAAGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| 3UTR TCA 90 bp | GAGTCTTCAAACTTCCCAGGTAATTCTAATTTGAAGCCAAGACTGTaGATCACTGGTCCAGAAGTATGTTTGTTTAGCAGAGATGTTCTG | + |
|
Preference number: 1 (lower is better) Translates to: ESSNFPGNSNLKPRL*ITGPEVCLFSRDVL Trigger: CAGAACATCTCTGCTAAACAAACATACTTCTGGACCAGTGATTCACAGTCTTGGCTTCAAATTAGAATTACCTGGGAAGTTTGAAGACTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| 3UTR-3UTR TCA 90 bp | CACAGACGTGCCATCCATGTTGATGTGAAAGGACCAATATTAAAGAGATGGCAGCACCCGGAGAACTTTTaGAAAATCCCGATTCCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: HRRAIHVDVKGPILKRWQHPENF*KIPIPG Trigger: CCCAGGAATCGGGATTTTTCAAAAGTTCTCCGGGTG...CTGCCATCTCTTTAATATTGGTCCTTTCACATCAACATGGATGGCACGTCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| 3UTR-3UTR TCA 90 bp | CACAGACGTGCCATCCATGTTGATGTGAAAGGACCAATATTAAAGAGATGGCAGTCCTGGGTCTCACCTTaGGATTCTAATTATTCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: HRRAIHVDVKGPILKRWQSWVSP*DSNYSG Trigger: CCCAGAATAATTAGAATCTCAAGGTGAGACCCAGGA...CTGCCATCTCTTTAATATTGGTCCTTTCACATCAACATGGATGGCACGTCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| 3UTR-3UTR CCA 90 bp | CCGATTCCTGGGTCTCACCTTGAGATTCTAATTATTCTGGGGGTGCTGTGTCAGAAGACTGTGAATCACTaGTCCAGAAGTATGTTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: PIPGSHLEILIILGVLCQKTVNH*SRSMFV Trigger: AACAAACATACTTCTGGACCAGTGATTCACAGTCTT...CTGACACAGCACCCCCAGAATAATTAGAATCTCAAGGTGAGACCCAGGAATCGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| 3UTR-3UTR GCA 90 bp | TCTTATATTACCCGACCAGAGGCAGAAGCTGCTCTTAGAAAGATAAACCAGGTAATTTCCCGTAGCCAGTaGCGAAACTTTACCTTAGAT | + |
|
Preference number: 2 (lower is better) Translates to: SYITRPEAEAALRKINQVISRSQ*RNFTLD Trigger: ATCTAAGGTAAAGTTTCGGCACTGGCTACGGGAAAT...TACCTGGTTTATCTTTCTAAGAGCAGCTTCTGCCTCTGGTCGGGTAATATAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524171.5 |
||
| 3UTR-3UTR TCA 90 bp | CAGAATTCATTAAATGAAGAGTGGTACGTTTCTTATATTACCCGACCAGAGGCATTGAAGCCAAGACTGTaGATCACTGGTCCAGAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: QNSLNEEWYVSYITRPEALKPRL*ITGPEV Trigger: TACTTCTGGACCAGTGATTCACAGTCTTGGCTTCAA...TGCCTCTGGTCGGGTAATATAAGAAACGTACCACTCTTCATTTAATGAATTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524171.5 |
||
| 3UTR-3UTR CCA 90 bp | ACATCGTACCAGTTCTATCTTCCTCTTAACACAGACGTGCCATCCATGTTGATGAAGACTGTGAATCACTaGTCCAGAAGTATGTTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: TSYQFYLPLNTDVPSMLMKTVNH*SRSMFV Trigger: AACAAACATACTTCTGGACCAGTGATTCACAGTCTT...CATCAACATGGATGGCACGTCTGTGTTAAGAGGAAGATAGAACTGGTACGATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| 3UTR-3UTR TCA 90 bp | GAAAGCAAAAATCTTTCATCTTTCACACTTAAACTCCACACCAGTAGTTCTCAGTTGAAGCCAAGACTGTaGATCACTGGTCCAGAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: ESKNLSSFTLKLHTSSSQLKPRL*ITGPEV Trigger: TACTTCTGGACCAGTGATTCACAGTCTTGGCTTCAA...CTGAGAACTACTGGTGTGGAGTTTAAGTGTGAAAGATGAAAGATTTTTGCTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| 3UTR-3UTR CCA 90 bp | TCTGATATTTTAGACTCTTCAAAGAGGGGGTTGTTTCTTTCTGCTTCTGCTAAGTCACAAAGCAATAACTaGGAGAGCTCTCATAGGATT | + |
|
Preference number: 2 (lower is better) Translates to: SDILDSSKRGLFLSASAKSQSNN*ESSHRI Trigger: AATCCTATGAGAGCTCTCCCAGTTATTGCTTTGTGA...CTTAGCAGAAGCAGAAAGAAACAACCCCCTCTTTGAAGAGTCTAAAATATCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000518395.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTCATTTGGTTGGCAGCATCTTAGGAGATTTTATTAATGAAAGAGTCTGTCTTACGTGCCATCCATGTTaGTGTGAAAGGACCAATATT | + |
|
Preference number: 2 (lower is better) Translates to: SHLVGSILGDFINERVCLTCHPC*CERTNI Trigger: AATATTGGTCCTTTCACATCAACATGGATGGCACGT...AAGACAGACTCTTTCATTAATAAAATCTCCTAAGATGCTGCCAACCAAATGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524171.5 |
||
| 3UTR-3UTR TCA 90 bp | AAACTGTTAGAAACAAGGGATACATCTGATATTTTAGACTCTTCAAAGAGGGGGTCAGTCTTGATGGGATaGTTAAAATGTAGGATAAGG | + |
|
Preference number: 2 (lower is better) Translates to: KLLETRDTSDILDSSKRGSVLMG*LKCRIR Trigger: CCTTATCCTACATTTTAATCATCCCATCAAGACTGA...CCCCCTCTTTGAAGAGTCTAAAATATCAGATGTATCCCTTGTTTCTAACAGTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000518395.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCTGTAATACCTAGGAGACCCATTAGTGCCAGCTTCACAACTACCAGCACCTCTCAAGGCAGTCATTaGGTTGGCAGCATCTTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LSVIPRRPISASFTTTSTSQGSH*VGSILG Trigger: TCCTAAGATGCTGCCAACCAAATGACTGCCTTGAGA...GGTGCTGGTAGTTGTGAAGCTGGCACTAATGGGTCTCCTAGGTATTACAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524171.5 |
||
| 3UTR-3UTR CAA 90 bp | CACAGACGTGCCATCCATGTTGATGTGAAAGGACCAATATTAAAGAGATGGCAGGGTCCAGAAGTATGTTaGTTTAGCAGAGATGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: HRRAIHVDVKGPILKRWQGPEVC*FSRDVL Trigger: CAGAACATCTCTGCTAAACAAACATACTTCTGGACC...CTGCCATCTCTTTAATATTGGTCCTTTCACATCAACATGGATGGCACGTCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| 3UTR-3UTR CAA 90 bp | ACATCGTACCAGTTCTATCTTCCTCTTAACACAGACGTGCCATCCATGTTGATGGGTCCAGAAGTATGTTaGTTTAGCAGAGATGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TSYQFYLPLNTDVPSMLMGPEVC*FSRDVL Trigger: CAGAACATCTCTGCTAAACAAACATACTTCTGGACC...CATCAACATGGATGGCACGTCTGTGTTAAGAGGAAGATAGAACTGGTACGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| 3UTR TCA 72 bp | AACTTCCCAGGTAATTCTAATTTGAAGCCAAGACTGTaGATCACTGGTCCAGAAGTATGTTTGTTTAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: NFPGNSNLKPRL*ITGPEVCLFSR Trigger: TCTGCTAAACAAACATACTTCTGGACCAGTGATTCACAGTCTTGGCTTCAAATTAGAATTACCTGGGAAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| 3UTR CCA 72 bp | ATTAATGAAAGAGTCTGTCTTGTCATAGGAATCACATaGTGTCAGAAGGAGACTCTCTTTCAAAGTTCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: INERVCLVIGIT*CQKETLFQSSN Trigger: GTTGGAACTTTGAAAGAGAGTCTCCTTCTGACACCATGTGATTCCTATGACAAGACAGACTCTTTCATTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| CDS-3UTR TCA 90 bp | CCGATTCCTGGGTCTCACCTTGAGATTCTAATTATTCTGGGGGTGCTGTGTCAGCGAAGCCGCGCCCCCTaGTTGGCCAGCTTCTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PIPGSHLEILIILGVLCQRSRAP*LASFSA Trigger: GGCGGAGAAGCTGGCCAATCAGGGGGCGCGGCTTCG...CTGACACAGCACCCCCAGAATAATTAGAATCTCAAGGTGAGACCCAGGAATCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000524171.5 |
||
| CDS-3UTR TCA 90 bp | TTCCAACATCGTACCAGTTCTATCTTCCTCTTAACACAGACGTGCCATCCATGTGCAGGGAGCCGACGGTaGAGGCGAAGCCGCGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FQHRTSSIFLLTQTCHPCAGSRR*RRSRAP Trigger: GGGGGCGCGGCTTCGCCTTCACCGTCGGCTCCCTGC...ACATGGATGGCACGTCTGTGTTAAGAGGAAGATAGAACTGGTACGATGTTGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| CDS-3UTR TCA 90 bp | TCTTGTCATAGGAATCACATGGTGTCAGAAGGAGACTCTCTTTCAAAGTTCCAAGCAGGGAGCCGACGGTaGAGGCGAAGCCGCGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SCHRNHMVSEGDSLSKFQAGSRR*RRSRAP Trigger: GGGGGCGCGGCTTCGCCTTCACCGTCGGCTCCCTGC...TTGGAACTTTGAAAGAGAGTCTCCTTCTGACACCATGTGATTCCTATGACAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| CDS-3UTR TCA 90 bp | ATTCCTGGGTCTCACCTTGAGATTCTAATTATTCTGGGGGTGCTGTGTCAGCTCCCGTCACCGAGGTTCTaGCAGGAGCAGGGAGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: IPGSHLEILIILGVLCQLPSPRF*QEQGAD Trigger: GTCGGCTCCCTGCTCCTGTCAGAACCTCGGTGACGG...GAGCTGACACAGCACCCCCAGAATAATTAGAATCTCAAGGTGAGACCCAGGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| CDS-3UTR TCA 90 bp | TCTTATATTACCCGACCAGAGGCAGAAGCTGCTCTTAGAAAGATAAACCAGGTACCGTCACCGAGGTTCTaGCAGGAGCAGGGAGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SYITRPEAEAALRKINQVPSPRF*QEQGAD Trigger: GTCGGCTCCCTGCTCCTGTCAGAACCTCGGTGACGG...TACCTGGTTTATCTTTCTAAGAGCAGCTTCTGCCTCTGGTCGGGTAATATAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524171.5 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAGTCATTTGGTTGGCAGCATCTTAGGAGATTTTATTAATGAAAGAGTCGCCGCGCCCCCTGATTaGCCAGCTTCTCCGCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: QGSHLVGSILGDFINERVAAPPD*PASPPA Trigger: CGCAGGCGGAGAAGCTGGCCAATCAGGGGGCGCGGC...GACTCTTTCATTAATAAAATCTCCTAAGATGCTGCCAACCAAATGACTGCCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000524171.5 |
||
| CDS-3UTR CCA 90 bp | ACATCGTACCAGTTCTATCTTCCTCTTAACACAGACGTGCCATCCATGTTGATGCGCTTCTTACCCATCTaGCCAACCGTCACCGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TSYQFYLPLNTDVPSMLMRFLPI*PTVTEV Trigger: AACCTCGGTGACGGTTGGCCAGATGGGTAAGAAGCG...CATCAACATGGATGGCACGTCTGTGTTAAGAGGAAGATAGAACTGGTACGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517575.4 |
||
| CDS-3UTR TCA 90 bp | CCGATTCCTGGGTCTCACCTTGAGATTCTAATTATTCTGGGGGTGCTGTGTCAGTTGAAGCCAAGACTGTaGATCACTGGTCCAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PIPGSHLEILIILGVLCQLKPRL*ITGPEV Trigger: TACTTCTGGACCAGTGATTCACAGTCTTGGCTTCAA...CTGACACAGCACCCCCAGAATAATTAGAATCTCAAGGTGAGACCCAGGAATCGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| CDS-3UTR CCA 90 bp | CCGATTCCTGGGTCTCACCTTGAGATTCTAATTATTCTGGGGGTGCTGTGTCAGGTCATAGGAATCACATaGTGTCAGAAGGAGACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PIPGSHLEILIILGVLCQVIGIT*CQKETL Trigger: GAGAGTCTCCTTCTGACACCATGTGATTCCTATGAC...CTGACACAGCACCCCCAGAATAATTAGAATCTCAAGGTGAGACCCAGGAATCGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| CDS-3UTR TCA 90 bp | ATTCCTGGGTCTCACCTTGAGATTCTAATTATTCTGGGGGTGCTGTGTCAGCTCTCCTGGGTCTCACCTTaGGATTCTAATTATTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IPGSHLEILIILGVLCQLSWVSP*DSNYSG Trigger: CCCAGAATAATTAGAATCTCAAGGTGAGACCCAGGA...GAGCTGACACAGCACCCCCAGAATAATTAGAATCTCAAGGTGAGACCCAGGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| CDS-3UTR TCA 90 bp | GTCTGTCTTGTCATAGGAATCACATGGTGTCAGAAGGAGACTCTCTTTCAAAGTGGCAGAGAAGGGAACTaGCCTGTCCTGAGTACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VCLVIGITWCQKETLFQSGREGN*PVLSTN Trigger: ATTGGTACTCAGGACAGGTCAGTTCCCTTCTCTGCC...ACTTTGAAAGAGAGTCTCCTTCTGACACCATGTGATTCCTATGACAAGACAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524171.5 |
||
| CDS-3UTR TCA 90 bp | ATCCCGATTCCTGGGTCTCACCTTGAGATTCTAATTATTCTGGGGGTGCTGTGTTTAGCAGAGATGTTCTaGCAGGCTCAATTAACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: IPIPGSHLEILIILGVLCLAEMF*QAQLTF Trigger: AAAAGTTAATTGAGCCTGTCAGAACATCTCTGCTAA...ACACAGCACCCCCAGAATAATTAGAATCTCAAGGTGAGACCCAGGAATCGGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| CDS-3UTR TCA 90 bp | CGTGCCATCCATGTTGATGTGAAAGGACCAATATTAAAGAGATGGCAGCAACTTTTGAAGCCAAGACTGTaGATCACTGGTCCAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RAIHVDVKGPILKRWQQLLKPRL*ITGPEV Trigger: TACTTCTGGACCAGTGATTCACAGTCTTGGCTTCAA...AAGTTGCTGCCATCTCTTTAATATTGGTCCTTTCACATCAACATGGATGGCACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| CDS-3UTR TCA 90 bp | CAGAATTCATTAAATGAAGAGTGGTACGTTTCTTATATTACCCGACCAGAGGCACACCCGGAGAACTTTTaGAAAATCCCGATTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QNSLNEEWYVSYITRPEAHPENF*KIPIPG Trigger: CCCAGGAATCGGGATTTTTCAAAAGTTCTCCGGGTG...TGCCTCTGGTCGGGTAATATAAGAAACGTACCACTCTTCATTTAATGAATTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000524171.5 |
||
| CDS-3UTR TCA 90 bp | CAAGGCAGTCATTTGGTTGGCAGCATCTTAGGAGATTTTATTAATGAAAGAGTCGCCTCTACCTTTTCCTaGGCAGGGAGAATTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGSHLVGSILGDFINERVASTFS*AGRISA Trigger: TGCAGAAATTCTCCCTGCTCAGGAAAAGGTAGAGGC...GACTCTTTCATTAATAAAATCTCCTAAGATGCTGCCAACCAAATGACTGCCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000524171.5 |
||
| CDS-3UTR GCA 90 bp | ACATCGTACCAGTTCTATCTTCCTCTTAACACAGACGTGCCATCCATGTTGATGATTTCCCGTAGCCAGTaGCGAAACTTTACCTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TSYQFYLPLNTDVPSMLMISRSQ*RNFTLD Trigger: ATCTAAGGTAAAGTTTCGGCACTGGCTACGGGAAAT...CATCAACATGGATGGCACGTCTGTGTTAAGAGGAAGATAGAACTGGTACGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| CDS-3UTR TCA 90 bp | GAAACAAGGGATACATCTGATATTTTAGACTCTTCAAAGAGGGGGTTGTTTCTTGCCTCTACCTTTTCCTaGGCAGGGAGAATTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ETRDTSDILDSSKRGLFLASTFS*AGRISA Trigger: TGCAGAAATTCTCCCTGCTCAGGAAAAGGTAGAGGC...AAGAAACAACCCCCTCTTTGAAGAGTCTAAAATATCAGATGTATCCCTTGTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000518395.2 |
||
| CDS-3UTR GCA 90 bp | GTCTGTCTTGTCATAGGAATCACATGGTGTCAGAAGGAGACTCTCTTTCAAAGTATTTCCCGTAGCCAGTaGCGAAACTTTACCTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VCLVIGITWCQKETLFQSISRSQ*RNFTLD Trigger: ATCTAAGGTAAAGTTTCGGCACTGGCTACGGGAAAT...ACTTTGAAAGAGAGTCTCCTTCTGACACCATGTGATTCCTATGACAAGACAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| CDS-3UTR TCA 90 bp | CACAGACGTGCCATCCATGTTGATGTGAAAGGACCAATATTAAAGAGATGGCAGTTAGCAGAGATGTTCTaGCAGGCTCAATTAACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HRRAIHVDVKGPILKRWQLAEMF*QAQLTF Trigger: AAAAGTTAATTGAGCCTGTCAGAACATCTCTGCTAA...CTGCCATCTCTTTAATATTGGTCCTTTCACATCAACATGGATGGCACGTCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| CDS-3UTR TCA 90 bp | AATGGGAAAGCAAAAATCTTTCATCTTTCACACTTAAACTCCACACCAGTAGTTCACCCGGAGAACTTTTaGAAAATCCCGATTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NGKAKIFHLSHLNSTPVVHPENF*KIPIPG Trigger: CCCAGGAATCGGGATTTTTCAAAAGTTCTCCGGGTG...AACTACTGGTGTGGAGTTTAAGTGTGAAAGATGAAAGATTTTTGCTTTCCCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| CDS-3UTR CCA 90 bp | ATTAATGAAAGAGTCTGTCTTGTCATAGGAATCACATGGTGTCAGAAGGAGACTGTCATAGGAATCACATaGTGTCAGAAGGAGACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: INERVCLVIGITWCQKETVIGIT*CQKETL Trigger: GAGAGTCTCCTTCTGACACCATGTGATTCCTATGAC...AGTCTCCTTCTGACACCATGTGATTCCTATGACAAGACAGACTCTTTCATTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| CDS-3UTR TCA 90 bp | ATTAATGAAAGAGTCTGTCTTGTCATAGGAATCACATGGTGTCAGAAGGAGACTACGTGCCATCCATGTTaGTGTGAAAGGACCAATATT | + |
|
Preference number: 4 (lower is better) Translates to: INERVCLVIGITWCQKETTCHPC*CERTNI Trigger: AATATTGGTCCTTTCACATCAACATGGATGGCACGT...AGTCTCCTTCTGACACCATGTGATTCCTATGACAAGACAGACTCTTTCATTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| CDS-3UTR CCA 90 bp | CGTGCCATCCATGTTGATGTGAAAGGACCAATATTAAAGAGATGGCAGCAACTTAAGACTGTGAATCACTaGTCCAGAAGTATGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RAIHVDVKGPILKRWQQLKTVNH*SRSMFV Trigger: AACAAACATACTTCTGGACCAGTGATTCACAGTCTT...AAGTTGCTGCCATCTCTTTAATATTGGTCCTTTCACATCAACATGGATGGCACG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| CDS-3UTR CCA 90 bp | AGTCATTTGGTTGGCAGCATCTTAGGAGATTTTATTAATGAAAGAGTCTGTCTTCGGGAATCATTAGGCTaGCAGAAGAATCTCAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SHLVGSILGDFINERVCLRESLG*QKNLKA Trigger: TGCCTTGAGATTCTTCTGCCAGCCTAATGATTCCCG...AAGACAGACTCTTTCATTAATAAAATCTCCTAAGATGCTGCCAACCAAATGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524171.5 |
||
| CDS-3UTR TCA 90 bp | AGTCATTTGGTTGGCAGCATCTTAGGAGATTTTATTAATGAAAGAGTCTGTCTTTCCTGGGTCTCACCTTaGGATTCTAATTATTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHLVGSILGDFINERVCLSWVSP*DSNYSG Trigger: CCCAGAATAATTAGAATCTCAAGGTGAGACCCAGGA...AAGACAGACTCTTTCATTAATAAAATCTCCTAAGATGCTGCCAACCAAATGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524171.5 |
||
| CDS-3UTR TCA 90 bp | GAAAGCAAAAATCTTTCATCTTTCACACTTAAACTCCACACCAGTAGTTCTCAGACGTGCCATCCATGTTaGTGTGAAAGGACCAATATT | + |
|
Preference number: 4 (lower is better) Translates to: ESKNLSSFTLKLHTSSSQTCHPC*CERTNI Trigger: AATATTGGTCCTTTCACATCAACATGGATGGCACGT...CTGAGAACTACTGGTGTGGAGTTTAAGTGTGAAAGATGAAAGATTTTTGCTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| CDS-3UTR CCA 90 bp | TCTTCAAAGAGGGGGTTGTTTCTTTCTGCTTCTGCTAAGTTCTCAGTCTTGATGCTCTTAGAAGAGTCCTaGATTATGGTAAATTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SSKRGLFLSASAKFSVLMLLEES*IMVNSV Trigger: TACAGAATTTACCATAATCCAGGACTCTTCTAAGAG...CATCAAGACTGAGAACTTAGCAGAAGCAGAAAGAAACAACCCCCTCTTTGAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000518395.2 |
||
| CDS-3UTR CCA 90 bp | AAACTGTTAGAAACAAGGGATACATCTGATATTTTAGACTCTTCAAAGAGGGGGTCACAAAGCAATAACTaGGAGAGCTCTCATAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: KLLETRDTSDILDSSKRGSQSNN*ESSHRI Trigger: AATCCTATGAGAGCTCTCCCAGTTATTGCTTTGTGA...CCCCCTCTTTGAAGAGTCTAAAATATCAGATGTATCCCTTGTTTCTAACAGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000518395.2 |
||
| CDS-3UTR TCA 90 bp | GAAACAAGGGATACATCTGATATTTTAGACTCTTCAAAGAGGGGGTTGTTTCTTTCAGTCTTGATGGGATaGTTAAAATGTAGGATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ETRDTSDILDSSKRGLFLSVLMG*LKCRIR Trigger: CCTTATCCTACATTTTAATCATCCCATCAAGACTGA...AAGAAACAACCCCCTCTTTGAAGAGTCTAAAATATCAGATGTATCCCTTGTTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000518395.2 |
||
| CDS-3UTR TCA 90 bp | GAAACAAGGGATACATCTGATATTTTAGACTCTTCAAAGAGGGGGTTGTTTCTTGTAAAGGTTGGCTGCTaGCATTACTTTTATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ETRDTSDILDSSKRGLFLVKVGC*HYFYLL Trigger: AAGAAGATAAAAGTAATGTCAGCAGCCAACCTTTAC...AAGAAACAACCCCCTCTTTGAAGAGTCTAAAATATCAGATGTATCCCTTGTTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000518395.2 |
||
| CDS-3UTR GCA 90 bp | GAAACAAGGGATACATCTGATATTTTAGACTCTTCAAAGAGGGGGTTGTTTCTTAAGAGAGTTCATTTATaGAGAGCTCTTAGAAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ETRDTSDILDSSKRGLFLKRVHL*RALRRV Trigger: GACTCTTCTAAGAGCTCTGCATAAATGAACTCTCTT...AAGAAACAACCCCCTCTTTGAAGAGTCTAAAATATCAGATGTATCCCTTGTTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000518395.2 |
||
| CDS TCA 90 bp | CCGAGCAGCCGTCACTACCCACCTGGCCAACCGTCACCGAGGTTCTaGCAGGAGCAGGGAGCCGACGGTGAAGGCGAAGCCGCGCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PSSRHYPPGQPSPRF*QEQGADGEGEAAPP Trigger: AGGGGGCGCGGCTTCGCCTTCACCGTCGGCTCCCTGCTCCTGTCAGAACCTCGGTGACGGTTGGCCAGGTGGGTAGTGACGGCTGCTCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521850.5 |
||
| CDS GCA 90 bp | ATCTCCGGGCCACAGGACGCCGCCCAGGCCCTCAGCCCGCAGCCCTaGAGAGCCATCGTTAGCACCGCAGGTTCTACTCTGAAAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ISGPQDAAQALSPQP*RAIVSTAGSTLKAQ Trigger: CTGGGCTTTCAGAGTAGAACCTGCGGTGCTAACGATGGCTCTGCAGGGCTGCGGGCTGAGGGCCTGGGCGGCGTCCTGTGGCCCGGAGAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521850.5 |
||
| CDS CCA 90 bp | CCTAGGCCCTCGAGCACCCAGCGCGTGGGTGGGGTGAGGGCACAGTaGGGTGCTACACAACAATGTAGCTGGGACTGGACTGGAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PRPSSTQRVGGVRAQ*GATQQCSWDWTGGR Trigger: CCTGCCTCCAGTCCAGTCCCAGCTACATTGTTGTGTAGCACCCCACTGTGCCCTCACCCCACCCACGCGCTGGGTGCTCGAGGGCCTAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521850.5 |
||
| CDS CCA 90 bp | CTACACAACAATGTAGCTGGGACTGGACTGGAGGCAGGACAGGTCTaGGTCAAGCCCTCCCCGGGGAGCTCGGCCAGGCCACTACCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LHNNVAGTGLEAGQV*VKPSPGSSARPLPR Trigger: TCTGGGTAGTGGCCTGGCCGAGCTCCCCGGGGAGGGCTTGACCCAGACCTGTCCTGCCTCCAGTCCAGTCCCAGCTACATTGTTGTGTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521850.5 |
||
| CDS CCA 90 bp | GTGGGTGGGGTGAGGGCACAGTGGGGTGCTACACAACAATGTAGCTaGGACTGGACTGGAGGCAGGACAGGTCTGGGTCAAGCCCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VGGVRAQWGATQQCS*DWTGGRTGLGQALP Trigger: GGGGAGGGCTTGACCCAGACCTGTCCTGCCTCCAGTCCAGTCCCAGCTACATTGTTGTGTAGCACCCCACTGTGCCCTCACCCCACCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521850.5 |
||
| CDS GCA 90 bp | GGGAGTTGTAGTCCCAGGCAAGGCCCCTACGGAGAAGGTTCTGGATaGCGGGTTACAACTGACTCGCGCGGCCACGTTGGCGGAAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSCSPRQGPYGEGSG*RVTTDSRGHVGGKS Trigger: GCTTTTTCCGCCAACGTGGCCGCGCGAGTCAGTTGTAACCCGGCATCCAGAACCTTCTCCGTAGGGGCCTTGCCTGGGACTACAACTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000521850.5 |
||
| CDS CCA 90 bp | ACCAGATTAGGATCCTTCAAGACCGAGCAGCCGTCACTACCCACCTaGCCAACCGTCACCGAGGTTCTGACAGGAGCAGGGAGCCGACGG | + |
|
Preference number: 5 (lower is better) Translates to: TRLGSFKTEQPSLPT*PTVTEVLTGAGSRR Trigger: CCGTCGGCTCCCTGCTCCTGTCAGAACCTCGGTGACGGTTGGCCAGGTGGGTAGTGACGGCTGCTCGGTCTTGAAGGATCCTAATCTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521850.5 |
||
| CDS GCA 90 bp | GCGCTTTGCATCTACCCCCAAGACCCCATTCTCCAGGATGTCAGCTaGCTTCCTTGGGCATGCCAAACCAAGAGTCAAGTTGCAGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ALCIYPQDPILQDVS*LPWACQTKSQVAGK Trigger: TTTCCCTGCAACTTGACTCTTGGTTTGGCATGCCCAAGGAAGGCAGCTGACATCCTGGAGAATGGGGTCTTGGGGGTAGATGCAAAGCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000521850.5 |
||
| CDS TCA 90 bp | TCCTTACCCCCAGTGTGCCAGGCTTTTGCAACCCTTATCTGCATTTaGGTCGCACAGGATAGCGGTAGCGTTAAGTGCAGACTCTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SLPPVCQAFATLICI*VAQDSGSVKCRLWN Trigger: ATTCCAGAGTCTGCACTTAACGCTACCGCTATCCTGTGCGACTCAAATGCAGATAAGGGTTGCAAAAGCCTGGCACACTGGGGGTAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000521850.5 |
||
| CDS-3UTR CAA 90 bp | TTCCAACATCGTACCAGTTCTATCTTCCTCTTAACACAGACGTGCCATCCATGTTCTCAAGGCAGTCATTaGGTTGGCAGCATCTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FQHRTSSIFLLTQTCHPCSQGSH*VGSILG Trigger: TCCTAAGATGCTGCCAACCAAATGACTGCCTTGAGA...ACATGGATGGCACGTCTGTGTTAAGAGGAAGATAGAACTGGTACGATGTTGGAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524171.5 |
||
| CDS-3UTR CAA 90 bp | TTCCAACATCGTACCAGTTCTATCTTCCTCTTAACACAGACGTGCCATCCATGTGGTCCAGAAGTATGTTaGTTTAGCAGAGATGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FQHRTSSIFLLTQTCHPCGPEVC*FSRDVL Trigger: CAGAACATCTCTGCTAAACAAACATACTTCTGGACC...ACATGGATGGCACGTCTGTGTTAAGAGGAAGATAGAACTGGTACGATGTTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||
| CDS-3UTR CAA 90 bp | AACTGGGAGAGCTCTCATAGGATTATGATGAAGAGAGTTCATTTATGCAGAGCTTCTTTAAGTCAATCCTaGCCTCTACCTTTTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: NWESSHRIMMKRVHLCRASLSQS*PLPFPE Trigger: CTCAGGAAAAGGTAGAGGCAAGGATTGACTTAAAGA...AGCTCTGCATAAATGAACTCTCTTCATCATAATCCTATGAGAGCTCTCCCAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518395.2 |
||
| CDS-3UTR CAA 90 bp | ATTAATGAAAGAGTCTGTCTTGTCATAGGAATCACATGGTGTCAGAAGGAGACTTCTTTAAGTCAATCCTaGCCTCTACCTTTTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: INERVCLVIGITWCQKETSLSQS*PLPFPE Trigger: CTCAGGAAAAGGTAGAGGCAAGGATTGACTTAAAGA...AGTCTCCTTCTGACACCATGTGATTCCTATGACAAGACAGACTCTTTCATTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524171.5 |
||
| CDS CCA 72 bp | GGAGCCGACGGTGAAGGCGAAGCCGCGCCCCCTGATTaGCCAGCTTCTCCGCCTGCGGCATCCTGGGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GADGEGEAAPPD*PASPPAASWEL Trigger: CAACTCCCAGGATGCCGCAGGCGGAGAAGCTGGCCAATCAGGGGGCGCGGCTTCGCCTTCACCGTCGGCTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521850.5 |
||
| CDS TCA 72 bp | CGTCACTACCCACCTGGCCAACCGTCACCGAGGTTCTaGCAGGAGCAGGGAGCCGACGGTGAAGGCGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RHYPPGQPSPRF*QEQGADGEGEA Trigger: GGCTTCGCCTTCACCGTCGGCTCCCTGCTCCTGTCAGAACCTCGGTGACGGTTGGCCAGGTGGGTAGTGACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521850.5 |
||
| CDS GCA 72 bp | AGTCCCAGGCAAGGCCCCTACGGAGAAGGTTCTGGATaGCGGGTTACAACTGACTCGCGCGGCCACGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SPRQGPYGEGSG*RVTTDSRGHVG Trigger: GCCAACGTGGCCGCGCGAGTCAGTTGTAACCCGGCATCCAGAACCTTCTCCGTAGGGGCCTTGCCTGGGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521850.5 |
||
| CDS GCA 72 bp | GGAGCTCGGCCAGGCCACTACCCAGAAAGGAGAGGCTaGTCCAACAGCAATTCACCGGGAGTGGGGAAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GARPGHYPERRG*SNSNSPGVGKR Trigger: CCGCTTCCCCACTCCCGGTGAATTGCTGTTGGAGCAGCCTCTCCTTTCTGGGTAGTGGCCTGGCCGAGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521850.5 |
||
| CDS TCA 72 bp | GCTTCTTACCCATCTGGCCAACCGTCACCGAGGTTCTaGCAGGAGCAGGGAGCCGACGGTGAAGGCGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ASYPSGQPSPRF*QEQGADGEGEA Trigger: GGCTTCGCCTTCACCGTCGGCTCCCTGCTCCTGTCAGAACCTCGGTGACGGTTGGCCAGATGGGTAAGAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517575.4 |
||
| CDS CCA 72 bp | GGATCCTTCAAGACCGAGCAGCCGTCACTACCCACCTaGCCAACCGTCACCGAGGTTCTGACAGGAGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GSFKTEQPSLPT*PTVTEVLTGAG Trigger: CCCTGCTCCTGTCAGAACCTCGGTGACGGTTGGCCAGGTGGGTAGTGACGGCTGCTCGGTCTTGAAGGATCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521850.5 |
||
| CDS CAA 90 bp | GAGAAGGTTCTGGATGCCGGGTTACAACTGACTCGCGCGGCCACGTaGGCGGAAAAAGCACTGACATTCCTTACCCCCAGTGTGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: EKVLDAGLQLTRAAT*AEKALTFLTPSVPG Trigger: GCCTGGCACACTGGGGGTAAGGAATGTCAGTGCTTTTTCCGCCAACGTGGCCGCGCGAGTCAGTTGTAACCCGGCATCCAGAACCTTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000521850.5 |
||
| CDS CCA 72 bp | GTGAGGGCACAGTGGGGTGCTACACAACAATGTAGCTaGGACTGGACTGGAGGCAGGACAGGTCTGGGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: VRAQWGATQQCS*DWTGGRTGLGQ Trigger: TTGACCCAGACCTGTCCTGCCTCCAGTCCAGTCCCAGCTACATTGTTGTGTAGCACCCCACTGTGCCCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521850.5 |
||
| CDS CAA 72 bp | CTGGATGCCGGGTTACAACTGACTCGCGCGGCCACGTaGGCGGAAAAAGCACTGACATTCCTTACCCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LDAGLQLTRAAT*AEKALTFLTPS Trigger: ACTGGGGGTAAGGAATGTCAGTGCTTTTTCCGCCAACGTGGCCGCGCGAGTCAGTTGTAACCCGGCATCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000521850.5 |
||
| CDS CAA 90 bp | GGCGGAAAAAGCACTGACATTCCTTACCCCCAGTGTGCCAGGCTTTaGCAACCCTTATCTGCATTTGAGTCGCACAGGATAGCGGTAGCG | + |
|
Preference number: 6 (lower is better) Translates to: GGKSTDIPYPQCARL*QPLSAFESHRIAVA Trigger: CGCTACCGCTATCCTGTGCGACTCAAATGCAGATAAGGGTTGCAAAAGCCTGGCACACTGGGGGTAAGGAATGTCAGTGCTTTTTCCGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000521850.5 |
||
| CDS CCA 72 bp | CAAGACCCCATTCTCCAGGATGTCAGCTGCCTTCCTTaGGCATGCCAAACCAAGAGTCAAGTTGCAGGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: QDPILQDVSCLP*ACQTKSQVAGK Trigger: TTTCCCTGCAACTTGACTCTTGGTTTGGCATGCCCAAGGAAGGCAGCTGACATCCTGGAGAATGGGGTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521850.5 |
||
| CDS TCA 72 bp | CCAGTGTGCCAGGCTTTTGCAACCCTTATCTGCATTTaGGTCGCACAGGATAGCGGTAGCGTTAAGTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PVCQAFATLICI*VAQDSGSVKCR Trigger: TCTGCACTTAACGCTACCGCTATCCTGTGCGACTCAAATGCAGATAAGGGTTGCAAAAGCCTGGCACACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521850.5 |
||
| CDS CCA 72 bp | TCCTCGCCCTCCCAGACAGGATTTGGAATGAACCTTTaGGGCTTACTAAGTTTCTTGCCAAGTGGACAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SSPSQTGFGMNL*GLLSFLPSGQD Trigger: ATCCTGTCCACTTGGCAAGAAACTTAGTAAGCCCCAAAGGTTCATTCCAAATCCTGTCTGGGAGGGCGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521850.5 |
||
| CDS CCA 72 bp | GAAGTTTCCACAGTCCTCGCCCTCCCAGACAGGATTTaGAATGAACCTTTGGGGCTTACTAAGTTTCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: EVSTVLALPDRI*NEPLGLTKFLA Trigger: GGCAAGAAACTTAGTAAGCCCCAAAGGTTCATTCCAAATCCTGTCTGGGAGGGCGAGGACTGTGGAAACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521850.5 |
||
| CDS CAA 72 bp | AGCACTGACATTCCTTACCCCCAGTGTGCCAGGCTTTaGCAACCCTTATCTGCATTTGAGTCGCACAGGATA | + |
|
Preference number: 6 (lower is better) Translates to: STDIPYPQCARL*QPLSAFESHRI Trigger: TATCCTGTGCGACTCAAATGCAGATAAGGGTTGCAAAAGCCTGGCACACTGGGGGTAAGGAATGTCAGTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521850.5 |
||
| CDS TCA 72 bp | CTGGTCCAGAAGTATGTTTGTTTAGCAGAGATGTTCTaGCAGGCTCAATTAACTTTTATCTTCTTCAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: LVQKYVCLAEMF*QAQLTFIFFNS Trigger: GGAGTTGAAGAAGATAAAAGTTAATTGAGCCTGTCAGAACATCTCTGCTAAACAAACATACTTCTGGACCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517575.4 ENST00000524171.5 |
||