Pregenerated sensors for C5ORF47 (Homo sapiens)
Ensembl gene IDs: ENSG00000185056Ensembl transcript IDs: ENST00000340147.7, ENST00000522195.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGAAAGGGCATCTCCTCTaGTCTTTGCCCAAAAATTTT | + |
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Preference number: 2 (lower is better) Translates to: TEFDHEQASFCLSLLSFQKGHLL*SLPKNF Trigger: AAAATTTTTGGGCAAAGATCAGAGGAGATGCCCTTT...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| 3UTR-3UTR TCA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGGGCGGAGGTAAAAGTTaGTTACTACTTAATGTTGAG | + |
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Preference number: 2 (lower is better) Translates to: TEFDHEQASFCLSLLSFQGGGKS*LLLNVE Trigger: CTCAACATTAAGTAGTAATCAACTTTTACCTCCGCC...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| 3UTR CAA 90 bp | CAGTATAAACAGTGTAAATATGTCTCATTTTGCAATGGACTTCAGTaGCATAAGCTAAAATTTGAAGCTTCACCCAAGGATTTAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: QYKQCKYVSFCNGLQ*HKLKFEASPKDLAA Trigger: GGCTGCTAAATCCTTGGGTGAAGCTTCAAATTTTAGCTTATGCAACTGAAGTCCATTGCAAAATGAGACATATTTACACTGTTTATACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS-3UTR GCA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGCGAGGGGCAGCTCGCTaGCACCCTGAACGCCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: TEFDHEQASFCLSLLSFQRGAAR*HPERPP Trigger: TGGCGGGCGTTCAGGGTGGCAGCGAGCTGCCCCTCG...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS-3UTR TCA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGAGCTCGCTGCCACCCTaGACGCCCGCCACCGCCATT | + |
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Preference number: 4 (lower is better) Translates to: TEFDHEQASFCLSLLSFQSSLPP*TPATAI Trigger: AATGGCGGTGGCGGGCGTTCAGGGTGGCAGCGAGCT...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS-3UTR CCA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGTCCCTCGGCTTCTCCTaGCGACAGCCTGCCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: TEFDHEQASFCLSLLSFQSLGFS*RQPAPG Trigger: GCCTGGGGCAGGCTGTCGCCAGGAGAAGCCGAGGGA...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS-3UTR CCA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGCTCGATGCCCGCAGCTaGGAGGAGGCAGAGGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: TEFDHEQASFCLSLLSFQLDARS*EEAEAA Trigger: TGCGGCCTCTGCCTCCTCCCAGCTGCGGGCATCGAG...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS-3UTR TCA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGAGGACGCCACTGCACTaGTGCGAGCCGAAGCGCGTC | + |
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Preference number: 4 (lower is better) Translates to: TEFDHEQASFCLSLLSFQRTPLH*CEPKRV Trigger: GACGCGCTTCGGCTCGCATCAGTGCAGTGGCGTCCT...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS-3UTR GCA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGCCAGACTGCCCACTGTaGAGGCGAGGGATGCGGGAG | + |
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Preference number: 4 (lower is better) Translates to: TEFDHEQASFCLSLLSFQPDCPL*RRGMRE Trigger: CTCCCGCATCCCTCGCCTGCACAGTGGGCAGTCTGG...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS-3UTR GCA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGGCCCGCCACCGCCATTaGTTCCCTCGGCTTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: TEFDHEQASFCLSLLSFQARHRH*FPRLLL Trigger: CAGGAGAAGCCGAGGGAAGCAATGGCGGTGGCGGGC...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS-3UTR TCA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGTGTCTGGTGCCGCTCTaGACTCTCGATGCCCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TEFDHEQASFCLSLLSFQCLVPL*TLDARS Trigger: GCTGCGGGCATCGAGAGTTCAGAGCGGCACCAGACA...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS-3UTR GCA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGGCTCTGAACTCTCGATaGCCGCAGCTGGGAGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: TEFDHEQASFCLSLLSFQALNSR*PQLGGG Trigger: GCCTCCTCCCAGCTGCGGGCATCGAGAGTTCAGAGC...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS-3UTR CCA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGCACGCGCCGACTGTCTaGTGCCGCTCTGAACTCTCG | + |
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Preference number: 4 (lower is better) Translates to: TEFDHEQASFCLSLLSFQHAPTV*CRSELS Trigger: CGAGAGTTCAGAGCGGCACCAGACAGTCGGCGCGTG...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS-3UTR GCA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGGTTGCAGGACGCCACTaGACTGATGCGAGCCGAAGC | + |
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Preference number: 4 (lower is better) Translates to: TEFDHEQASFCLSLLSFQVAGRH*TDASRS Trigger: GCTTCGGCTCGCATCAGTGCAGTGGCGTCCTGCAAC...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS-3UTR GCA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGGCGCCGACTGTCTGGTaGCGCTCTGAACTCTCGATG | + |
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Preference number: 4 (lower is better) Translates to: TEFDHEQASFCLSLLSFQAPTVW*RSELSM Trigger: CATCGAGAGTTCAGAGCGGCACCAGACAGTCGGCGC...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS-3UTR CCA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGTTAGCTGCATCCTTCTaGATTAAACCTGCACGCGCC | + |
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Preference number: 4 (lower is better) Translates to: TEFDHEQASFCLSLLSFQLAASF*IKPARA Trigger: GGCGCGTGCAGGTTTAATCCAGAAGGATGCAGCTAA...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS-3UTR TCA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGTATAAAGAAGTTGTGTaGCCCTCAATGCAGGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: TEFDHEQASFCLSLLSFQYKEVV*PSMQGN Trigger: GTTTCCCTGCATTGAGGGTCACACAACTTCTTTATA...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS-3UTR CCA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGTCACTAGATAACCTTTaGCATTTCAGCCTGTGTCTA | + |
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Preference number: 4 (lower is better) Translates to: TEFDHEQASFCLSLLSFQSLDNL*HFSLCL Trigger: TAGACACAGGCTGAAATGCCAAAGGTTATCTAGTGA...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS-3UTR CCA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGGAACATTCATTTCAGTaGGAGTCTTCATTCCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: TEFDHEQASFCLSLLSFQEHSFQ*ESSFLH Trigger: ATGGAGGAATGAAGACTCCCACTGAAATGAATGTTC...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS-3UTR TCA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGAAGGATTTAGCAGCCTaGAATTTACCCAGCATAATA | + |
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Preference number: 4 (lower is better) Translates to: TEFDHEQASFCLSLLSFQKDLAA*NLPSII Trigger: TATTATGCTGGGTAAATTTCAGGCTGCTAAATCCTT...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS-3UTR TCA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGGCAGCTTATGTTCAGTaGTGTATCAGTAAAGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: TEFDHEQASFCLSLLSFQAAYVQ*CISKEK Trigger: CTTTTCTTTACTGATACATCACTGAACATAAGCTGC...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS-3UTR TCA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGGTCATTAGCCCCTACTaGAATTATGGAACAGAAATA | + |
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Preference number: 4 (lower is better) Translates to: TEFDHEQASFCLSLLSFQVISPY*NYGTEI Trigger: TATTTCTGTTCCATAATTTCAGTAGGGGCTAATGAC...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS-3UTR CCA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGGGAAGCTTCATTCAATaGTATGGGAAAATCATACTT | + |
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Preference number: 4 (lower is better) Translates to: TEFDHEQASFCLSLLSFQGSFIQ*YGKIIL Trigger: AAGTATGATTTTCCCATACCATTGAATGAAGCTTCC...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS GCA 90 bp | GCCCGCCACCGCCATTGCTTCCCTCGGCTTCTCCTGGCGACAGCCTaGCCCAGGCCCCTGACCCCAAAGGCCTTGAGCTCCACGGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: ARHRHCFPRLLLATA*PRPLTPKALSSTAA Trigger: GGCGGCCGTGGAGCTCAAGGCCTTTGGGGTCAGGGGCCTGGGGCAGGCTGTCGCCAGGAGAAGCCGAGGGAAGCAATGGCGGTGGCGGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS GCA 90 bp | CCCAAAGGCCTTGAGCTCCACGGCCGCCCAGTTGCAGGACGCCACTaGACTGATGCGAGCCGAAGCGCGTCACATAGACGAAGCGCGCCG | + |
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Preference number: 5 (lower is better) Translates to: PKGLELHGRPVAGRH*TDASRSASHRRSAP Trigger: CGGCGCGCTTCGTCTATGTGACGCGCTTCGGCTCGCATCAGTGCAGTGGCGTCCTGCAACTGGGCGGCCGTGGAGCTCAAGGCCTTTGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS-3UTR CAA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGTCCACGGCCGCCCAGTaGCAGGACGCCACTGCACTG | + |
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Preference number: 5 (lower is better) Translates to: TEFDHEQASFCLSLLSFQSTAAQ*QDATAL Trigger: CAGTGCAGTGGCGTCCTGCAACTGGGCGGCCGTGGA...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS-3UTR CAA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGCTGACCCCAAAGGCCTaGAGCTCCACGGCCGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: TEFDHEQASFCLSLLSFQLTPKA*SSTAAQ Trigger: CTGGGCGGCCGTGGAGCTCAAGGCCTTTGGGGTCAG...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS-3UTR CAA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGCGCCCGCCACCGCCATaGCTTCCCTCGGCTTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: TEFDHEQASFCLSLLSFQRPPPP*LPSASP Trigger: AGGAGAAGCCGAGGGAAGCAATGGCGGTGGCGGGCG...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS TCA 90 bp | CTTGTGAATAACATCTTTTCTCCCTTGCAAAACGCATCACCTCAGTaGTTGGCTTGCTGCCTGATAAGGCGAGGAGGAGTTTCTGCTCAC | + |
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Preference number: 5 (lower is better) Translates to: LVNNIFSPLQNASPQ*LACCLIRRGGVSAH Trigger: GTGAGCAGAAACTCCTCCTCGCCTTATCAGGCAGCAAGCCAATCACTGAGGTGATGCGTTTTGCAAGGGAGAAAAGATGTTATTCACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522195.1 |
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| CDS TCA 90 bp | GTGGATTTCAGGTTTGTTCTCCCGTCTTCTCACACAGCAGCCTTGTaGATAACATCTTTTCTCCCTTGCAAAACGCATCACCTCAGTGAT | + |
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Preference number: 5 (lower is better) Translates to: VDFRFVLPSSHTAAL*ITSFLPCKTHHLSD Trigger: ATCACTGAGGTGATGCGTTTTGCAAGGGAGAAAAGATGTTATTCACAAGGCTGCTGTGTGAGAAGACGGGAGAACAAACCTGAAATCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522195.1 |
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| CDS CCA 90 bp | TTCATCTTGTGTAATTTGAGCCTTCAAGCCCTATATTTGGGGAGGTaGATTTCAGGTTTGTTCTCCCGTCTTCTCACACAGCAGCCTTGT | + |
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Preference number: 5 (lower is better) Translates to: FILCNLSLQALYLGR*ISGLFSRLLTQQPC Trigger: ACAAGGCTGCTGTGTGAGAAGACGGGAGAACAAACCTGAAATCCACCTCCCCAAATATAGGGCTTGAAGGCTCAAATTACACAAGATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522195.1 |
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| CDS-3UTR CAA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGCATAATATAAAGAAGTaGTGTGACCCTCAATGCAGG | + |
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Preference number: 5 (lower is better) Translates to: TEFDHEQASFCLSLLSFQHNIKK*CDPQCR Trigger: CCTGCATTGAGGGTCACACAACTTCTTTATATTATG...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS-3UTR CAA 90 bp | ACAGAATTTGATCATGAACAAGCCTCATTTTGTCTTTCCCTCCTAAGTTTCCAGGTTCCACCTAGGTCTTaGATTCAATTTAGAAAGAGA | + |
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Preference number: 5 (lower is better) Translates to: TEFDHEQASFCLSLLSFQVPPRS*IQFRKR Trigger: TCTCTTTCTAAATTGAATCAAAGACCTAGGTGGAAC...CTGGAAACTTAGGAGGGAAAGACAAAATGAGGCTTGTTCATGATCAAATTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS GCA 72 bp | CGCCATTGCTTCCCTCGGCTTCTCCTGGCGACAGCCTaGCCCAGGCCCCTGACCCCAAAGGCCTTGAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: RHCFPRLLLATA*PRPLTPKALSS Trigger: GGAGCTCAAGGCCTTTGGGGTCAGGGGCCTGGGGCAGGCTGTCGCCAGGAGAAGCCGAGGGAAGCAATGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS CAA 90 bp | CCCAGGCCCCTGACCCCAAAGGCCTTGAGCTCCACGGCCGCCCAGTaGCAGGACGCCACTGCACTGATGCGAGCCGAAGCGCGTCACATA | + |
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Preference number: 6 (lower is better) Translates to: PRPLTPKALSSTAAQ*QDATALMRAEARHI Trigger: TATGTGACGCGCTTCGGCTCGCATCAGTGCAGTGGCGTCCTGCAACTGGGCGGCCGTGGAGCTCAAGGCCTTTGGGGTCAGGGGCCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS CAA 72 bp | CTGACCCCAAAGGCCTTGAGCTCCACGGCCGCCCAGTaGCAGGACGCCACTGCACTGATGCGAGCCGAAGCG | + |
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Preference number: 6 (lower is better) Translates to: LTPKALSSTAAQ*QDATALMRAEA Trigger: CGCTTCGGCTCGCATCAGTGCAGTGGCGTCCTGCAACTGGGCGGCCGTGGAGCTCAAGGCCTTTGGGGTCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS GCA 72 bp | CTTGAGCTCCACGGCCGCCCAGTTGCAGGACGCCACTaGACTGATGCGAGCCGAAGCGCGTCACATAGACGA | + |
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Preference number: 6 (lower is better) Translates to: LELHGRPVAGRH*TDASRSASHRR Trigger: TCGTCTATGTGACGCGCTTCGGCTCGCATCAGTGCAGTGGCGTCCTGCAACTGGGCGGCCGTGGAGCTCAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS TCA 72 bp | ATTAAACCTGCACGCGCCGACTGTCTGGTGCCGCTCTaGACTCTCGATGCCCGCAGCTGGGAGGAGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: IKPARADCLVPL*TLDARSWEEAE Trigger: CTCTGCCTCCTCCCAGCTGCGGGCATCGAGAGTTCAGAGCGGCACCAGACAGTCGGCGCGTGCAGGTTTAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS GCA 72 bp | CCTTCTGGATTAAACCTGCACGCGCCGACTGTCTGGTaGCGCTCTGAACTCTCGATGCCCGCAGCTGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: PSGLNLHAPTVW*RSELSMPAAGR Trigger: CCTCCCAGCTGCGGGCATCGAGAGTTCAGAGCGGCACCAGACAGTCGGCGCGTGCAGGTTTAATCCAGAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS GCA 72 bp | ATTGGCTTGCTGCCTGATAAGGCGAGGAGGAGTTTCTaGTCACTAGTCCTTCCCCCGCCCCCGTGGGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: IGLLPDKARRSF*SLVLPPPPWAA Trigger: TGCGGCCCACGGGGGCGGGGGAAGGACTAGTGAGCAGAAACTCCTCCTCGCCTTATCAGGCAGCAAGCCAAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000522195.1 |
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| CDS CCA 72 bp | CATCCTTCTGGATTAAACCTGCACGCGCCGACTGTCTaGTGCCGCTCTGAACTCTCGATGCCCGCAGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: HPSGLNLHAPTV*CRSELSMPAAG Trigger: CCCAGCTGCGGGCATCGAGAGTTCAGAGCGGCACCAGACAGTCGGCGCGTGCAGGTTTAATCCAGAAGGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS CAA 72 bp | TTCTCCCTTGCAAAACGCATCACCTCAGTGATTGGCTaGCTGCCTGATAAGGCGAGGAGGAGTTTCTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: FSLAKRITSVIG*LPDKARRSFCS Trigger: TGAGCAGAAACTCCTCCTCGCCTTATCAGGCAGCAAGCCAATCACTGAGGTGATGCGTTTTGCAAGGGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522195.1 |
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| CDS CCA 72 bp | GGTATGGGAAAATCATACTTTTTAGCTGCATCCTTCTaGATTAAACCTGCACGCGCCGACTGTCTGGTGCCG | + |
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Preference number: 6 (lower is better) Translates to: GMGKSYFLAASF*IKPARADCLVP Trigger: CGGCACCAGACAGTCGGCGCGTGCAGGTTTAATCCAGAAGGATGCAGCTAAAAAGTATGATTTTCCCATACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340147.7 |
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| CDS TCA 72 bp | AACATCTTTTCTCCCTTGCAAAACGCATCACCTCAGTaGTTGGCTTGCTGCCTGATAAGGCGAGGAGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: NIFSPLQNASPQ*LACCLIRRGGV Trigger: AACTCCTCCTCGCCTTATCAGGCAGCAAGCCAATCACTGAGGTGATGCGTTTTGCAAGGGAGAAAAGATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522195.1 |
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| CDS CCA 72 bp | TGTAATTTGAGCCTTCAAGCCCTATATTTGGGGAGGTaGATTTCAGGTTTGTTCTCCCGTCTTCTCACACAG | + |
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Preference number: 6 (lower is better) Translates to: CNLSLQALYLGR*ISGLFSRLLTQ Trigger: CTGTGTGAGAAGACGGGAGAACAAACCTGAAATCCACCTCCCCAAATATAGGGCTTGAAGGCTCAAATTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522195.1 |
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| CDS CAA 90 bp | ATAAGAAGATTCATCTTGTGTAATTTGAGCCTTCAAGCCCTATATTaGGGGAGGTGGATTTCAGGTTTGTTCTCCCGTCTTCTCACACAG | + |
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Preference number: 6 (lower is better) Translates to: IRRFILCNLSLQALY*GRWISGLFSRLLTQ Trigger: CTGTGTGAGAAGACGGGAGAACAAACCTGAAATCCACCTCCCCAAATATAGGGCTTGAAGGCTCAAATTACACAAGATGAATCTTCTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522195.1 |
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| CDS CAA 72 bp | AAAGATAGGTTATTCCAGAAGATAAGAAGATTCATCTaGTGTAATTTGAGCCTTCAAGCCCTATATTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: KDRLFQKIRRFI*CNLSLQALYLG Trigger: CCCCAAATATAGGGCTTGAAGGCTCAAATTACACAAGATGAATCTTCTTATCTTCTGGAATAACCTATCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000522195.1 |
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