Pregenerated sensors for C5ORF38 (Homo sapiens)
Ensembl gene IDs: ENSG00000186493Ensembl transcript IDs: ENST00000397835.4, ENST00000503940.5, ENST00000505106.5, ENST00000515640.5, ENST00000647681.1, ENST00000649739.1, ENST00000650439.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGGAGCCTCGGGCCAGGAGGCAGAGCAGGTCCGGGACCGTGGAAGTaGGAGCCGCGCGCACTGCCCGGAGGAAGACCCGAGCCGCGGGCG | + |
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Preference number: 5 (lower is better) Translates to: GSLGPGGRAGPGPWK*EPRALPGGRPEPRA Trigger: CGCCCGCGGCTCGGGTCTTCCTCCGGGCAGTGCGCGCGGCTCTCACTTCCACGGTCCCGGACCTGCTCTGCCTCCTGGCCCGAGGCTCCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000397835.4 ENST00000503940.5 ENST00000505106.5 ENST00000515640.5 ENST00000647681.1 ENST00000649739.1 ENST00000650439.1 |
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| CDS GCA 90 bp | GGGGCGAGTGGCTCGGCTCGGGAGCTCCTGGCGGGAGGGGTAACGTaGCTGGACCGCGCCTACCGGGAGCCTGCCGGCTCAGGAGGAGCC | + |
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Preference number: 5 (lower is better) Translates to: GASGSARELLAGGVT*LDRAYREPAGSGGA Trigger: GGCTCCTCCTGAGCCGGCAGGCTCCCGGTAGGCGCGGTCCAGGCACGTTACCCCTCCCGCCAGGAGCTCCCGAGCCGAGCCACTCGCCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS GCA 90 bp | GAGGCAGAGCAGGTCCGGGACCGTGGAAGTGAGAGCCGCGCGCACTaGCCGGAGGAAGACCCGAGCCGCGGGCGCCACCATCCTGACCTC | + |
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Preference number: 5 (lower is better) Translates to: EAEQVRDRGSESRAH*PEEDPSRGRHHPDL Trigger: GAGGTCAGGATGGTGGCGCCCGCGGCTCGGGTCTTCCTCCGGGCAGTGCGCGCGGCTCTCACTTCCACGGTCCCGGACCTGCTCTGCCTC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000503940.5 ENST00000505106.5 ENST00000515640.5 ENST00000647681.1 ENST00000649739.1 ENST00000650439.1 |
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| CDS TCA 90 bp | CGCGCACTGCCCGGAGGAAGACCCGAGCCGCGGGCGCCACCATCCTaGCCTCCCCACTTCCCTGCGACTTCCGGATTGGACACAGGGGCC | + |
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Preference number: 5 (lower is better) Translates to: RALPGGRPEPRAPPS*PPHFPATSGLDTGA Trigger: GGCCCCTGTGTCCAATCCGGAAGTCGCAGGGAAGTGGGGAGGTCAGGATGGTGGCGCCCGCGGCTCGGGTCTTCCTCCGGGCAGTGCGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000647681.1 ENST00000649739.1 |
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| CDS GCA 90 bp | GCCCTCCTGGCAATTCGCAACCAAGGCGCCCCGGATCCAGGTCCATaGTGGGCGGAGTGGACCGCGAGGGGTAGGCGACCAGACGCGAGG | + |
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Preference number: 5 (lower is better) Translates to: ALLAIRNQGAPDPGP*WAEWTARGRRPDAR Trigger: CCTCGCGTCTGGTCGCCTACCCCTCGCGGTCCACTCCGCCCAGCATGGACCTGGATCCGGGGCGCCTTGGTTGCGAATTGCCAGGAGGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000397835.4 ENST00000503940.5 ENST00000505106.5 ENST00000515640.5 ENST00000647681.1 ENST00000649739.1 ENST00000650439.1 |
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| CDS CCA 90 bp | CTCCTGGCAATTCGCAACCAAGGCGCCCCGGATCCAGGTCCATGCTaGGCGGAGTGGACCGCGAGGGGTAGGCGACCAGACGCGAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: LLAIRNQGAPDPGPC*AEWTARGRRPDARP Trigger: TGGCCTCGCGTCTGGTCGCCTACCCCTCGCGGTCCACTCCGCCCAGCATGGACCTGGATCCGGGGCGCCTTGGTTGCGAATTGCCAGGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000397835.4 ENST00000503940.5 ENST00000505106.5 ENST00000515640.5 ENST00000647681.1 ENST00000649739.1 ENST00000650439.1 |
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| CDS GCA 90 bp | CCTGGCGGGAGGGGTAACGTGCCTGGACCGCGCCTACCGGGAGCCTaGCGGCTCAGGAGGAGCCATCCTCAAGCACAGCACTGCAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: PGGRGNVPGPRLPGA*RLRRSHPQAQHCSL Trigger: CAAACTGCAGTGCTGTGCTTGAGGATGGCTCCTCCTGAGCCGGCAGGCTCCCGGTAGGCGCGGTCCAGGCACGTTACCCCTCCCGCCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS CCA 90 bp | GCTGGGTCGTTGCAGGGGGCCCAGCCTGTGGGAACGGGGTGTCTGTaGGTGGAGGGAGAGGTGGTCGTGGGTGTGTGTGCGTGTGCGTGT | + |
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Preference number: 5 (lower is better) Translates to: AGSLQGAQPVGTGCL*VEGEVVVGVCACAC Trigger: ACACGCACACGCACACACACCCACGACCACCTCTCCCTCCACCCACAGACACCCCGTTCCCACAGGCTGGGCCCCCTGCAACGACCCAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS CCA 90 bp | GGTCGTTGCAGGGGGCCCAGCCTGTGGGAACGGGGTGTCTGTGGGTaGAGGGAGAGGTGGTCGTGGGTGTGTGTGCGTGTGCGTGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: GRCRGPSLWERGVCG*RERWSWVCVRVRVL Trigger: CAACACACGCACACGCACACACACCCACGACCACCTCTCCCTCCACCCACAGACACCCCGTTCCCACAGGCTGGGCCCCCTGCAACGACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS TCA 90 bp | GGTTCCCTTGCACCTGTAATGCCCACTGCACCGGCGGCGCCAACCTaGGCTCCTGCCCGTTCTCGACGTGACTGGGAGGCTTCAGGTCCT | + |
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Preference number: 5 (lower is better) Translates to: GSLAPVMPTAPAAPT*APARSRRDWEASGP Trigger: AGGACCTGAAGCCTCCCAGTCACGTCGAGAACGGGCAGGAGCTCAGGTTGGCGCCGCCGGTGCAGTGGGCATTACAGGTGCAAGGGAACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000503940.5 ENST00000505106.5 ENST00000515640.5 ENST00000647681.1 ENST00000650439.1 |
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| CDS TCA 90 bp | CTAAATTCTTTGGCTGTAATGCCCACTGCACCGGCGGCGCCAACCTaGGCTCCTGCCCGTTCTCGACGTGACTGGGAGGCTTCAGGTCCT | + |
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Preference number: 5 (lower is better) Translates to: LNSLAVMPTAPAAPT*APARSRRDWEASGP Trigger: AGGACCTGAAGCCTCCCAGTCACGTCGAGAACGGGCAGGAGCTCAGGTTGGCGCCGCCGGTGCAGTGGGCATTACAGCCAAAGAATTTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397835.4 |
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| CDS TCA 90 bp | GGTGGAGGGAGAGGTGGTCGTGGGTGTGTGTGCGTGTGCGTGTGTTaGGATGGCCTGAAGAGGATGTGTGCAGGATGGGGGTGTGGTTTG | + |
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Preference number: 5 (lower is better) Translates to: GGGRGGRGCVCVCVC*DGLKRMCAGWGCGL Trigger: CAAACCACACCCCCATCCTGCACACATCCTCTTCAGGCCATCTCAACACACGCACACGCACACACACCCACGACCACCTCTCCCTCCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS GCA 90 bp | GTGTGTGTGCGTGTGCGTGTGTTGAGATGGCCTGAAGAGGATGTGTaGAGGATGGGGGTGTGGTTTGTAGGAAGAGTGGTGGGGGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: VCVRVRVLRWPEEDV*RMGVWFVGRVVGEQ Trigger: CTGCTCCCCCACCACTCTTCCTACAAACCACACCCCCATCCTGCACACATCCTCTTCAGGCCATCTCAACACACGCACACGCACACACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS CCA 90 bp | AGGGAGAGGTGGTCGTGGGTGTGTGTGCGTGTGCGTGTGTTGAGATaGCCTGAAGAGGATGTGTGCAGGATGGGGGTGTGGTTTGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: RERWSWVCVRVRVLR*PEEDVCRMGVWFVG Trigger: TCCTACAAACCACACCCCCATCCTGCACACATCCTCTTCAGGCCATCTCAACACACGCACACGCACACACACCCACGACCACCTCTCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS TCA 90 bp | AAATACACACAGGACGGGAAGAGGCCATCTTCAAACTCCCAACACTaGGCTAAAGAGGGGGAAGGGCAGGCGGCGTTTCTGGAGATGCAC | + |
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Preference number: 5 (lower is better) Translates to: KYTQDGKRPSSNSQH*AKEGEGQAAFLEMH Trigger: GTGCATCTCCAGAAACGCCGCCTGCCCTTCCCCCTCTTTAGCTCAGTGTTGGGAGTTTGAAGATGGCCTCTTCCCGTCCTGTGTGTATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS GCA 90 bp | ATTCCCTCCCAGGAAGCGCAAAAATGTCGCAGACTGTCGACGGCTTaGCCAACCCGGCTGCTTTCTCTCTCTCTCTGTTTTTCAGCTCTA | + |
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Preference number: 5 (lower is better) Translates to: IPSQEAQKCRRLSTA*PTRLLSLSLCFSAL Trigger: TAGAGCTGAAAAACAGAGAGAGAGAGAAAGCAGCCGGGTTGGGCAAGCCGTCGACAGTCTGCGACATTTTTGCGCTTCCTGGGAGGGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS CCA 90 bp | TGTGTTTGCCATCCAGCGTGTGGGCCTCTCATTTACCCCTCTTCTTaGAGGAATTCCCTCCCAGGAAGCGCAAAAATGTCGCAGACTGTC | + |
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Preference number: 5 (lower is better) Translates to: CVCHPACGPLIYPSS*RNSLPGSAKMSQTV Trigger: GACAGTCTGCGACATTTTTGCGCTTCCTGGGAGGGAATTCCTCCAAGAAGAGGGGTAAATGAGAGGCCCACACGCTGGATGGCAAACACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS TCA 90 bp | AGGGGACCCTCCCCGCCACTGCACGTGTCTGGTTATATATTTAATTaGTGTCAGAATCGACTGTATCCAGAGCAGACACTCCAGCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: RGPSPPLHVSGYIFN*CQNRLYPEQTLQLQ Trigger: TTGGAGCTGGAGTGTCTGCTCTGGATACAGTCGATTCTGACATCAATTAAATATATAACCAGACACGTGCAGTGGCGGGGAGGGTCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS TCA 90 bp | ATGTCAGAATCGACTGTATCCAGAGCAGACACTCCAGCTCCAAACTaGGGATGTTTGTATAATAACTGGCTGTTTTCTCTTCTGCCCCTG | + |
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Preference number: 5 (lower is better) Translates to: MSESTVSRADTPAPN*GCLYNNWLFSLLPL Trigger: CAGGGGCAGAAGAGAAAACAGCCAGTTATTATACAAACATCCTCAGTTTGGAGCTGGAGTGTCTGCTCTGGATACAGTCGATTCTGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS CCA 90 bp | TTTATTAGTAACAGGCAGCAGCGGTATGGAACATATAGATTTCAGTaGAGGAGTATAATTGCTAAGGGGAAAATACACACAGGACGGGAA | + |
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Preference number: 5 (lower is better) Translates to: FISNRQQRYGTYRFQ*RSIIAKGKIHTGRE Trigger: TTCCCGTCCTGTGTGTATTTTCCCCTTAGCAATTATACTCCTCCACTGAAATCTATATGTTCCATACCGCTGCTGCCTGTTACTAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS GCA 72 bp | AAGCCGCCGGGGGAGGAGGTGGGTCGCGCCCACCGTTaGCGGGACTCGGGCCGGCAGACACGGGCCACAGCG | + |
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Preference number: 6 (lower is better) Translates to: KPPGEEVGRAHR*RDSGRQTRATA Trigger: CGCTGTGGCCCGTGTCTGCCGGCCCGAGTCCCGGCAACGGTGGGCGCGACCCACCTCCTCCCCCGGCGGCTT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000397835.4 ENST00000647681.1 |
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| CDS GCA 72 bp | CAGGTCCGGGACCGTGGAAGTGAGAGCCGCGCGCACTaGCCGGAGGAAGACCCGAGCCGCGGGCGCCACCAT | + |
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Preference number: 6 (lower is better) Translates to: QVRDRGSESRAH*PEEDPSRGRHH Trigger: ATGGTGGCGCCCGCGGCTCGGGTCTTCCTCCGGGCAGTGCGCGCGGCTCTCACTTCCACGGTCCCGGACCTG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000397835.4 ENST00000503940.5 ENST00000505106.5 ENST00000515640.5 ENST00000647681.1 ENST00000649739.1 ENST00000650439.1 |
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| CDS CCA 72 bp | CAAGGCGCCCCGGATCCAGGTCCATGCTGGGCGGAGTaGACCGCGAGGGGTAGGCGACCAGACGCGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: QGAPDPGPCWAE*TARGRRPDARP Trigger: TGGCCTCGCGTCTGGTCGCCTACCCCTCGCGGTCCACTCCGCCCAGCATGGACCTGGATCCGGGGCGCCTTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000397835.4 ENST00000503940.5 ENST00000505106.5 ENST00000515640.5 ENST00000647681.1 ENST00000649739.1 ENST00000650439.1 |
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| CDS CCA 72 bp | TTCTTCTTCCCCGAATTAAGCCGCCGGGGGAGGAGGTaGGTCGCGCCCACCGTTGCCGGGACTCGGGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: FFFPELSRRGRR*VAPTVAGTRAG Trigger: GCCGGCCCGAGTCCCGGCAACGGTGGGCGCGACCCACCTCCTCCCCCGGCGGCTTAATTCGGGGAAGAAGAA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000397835.4 ENST00000647681.1 |
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| CDS TCA 72 bp | GGCGGCGCCAACCTGAGCTCCTGCCCGTTCTCGACGTaGCTGGGAGGCTTCAGGTCCTCAGGGCCCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GGANLSSCPFST*LGGFRSSGPSW Trigger: CCAGGAGGGCCCTGAGGACCTGAAGCCTCCCAGTCACGTCGAGAACGGGCAGGAGCTCAGGTTGGCGCCGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503940.5 ENST00000505106.5 |
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| CDS GCA 72 bp | GCAATTCGCAACCAAGGCGCCCCGGATCCAGGTCCATaGTGGGCGGAGTGGACCGCGAGGGGTAGGCGACCA | + |
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Preference number: 6 (lower is better) Translates to: AIRNQGAPDPGP*WAEWTARGRRP Trigger: TGGTCGCCTACCCCTCGCGGTCCACTCCGCCCAGCATGGACCTGGATCCGGGGCGCCTTGGTTGCGAATTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000397835.4 ENST00000503940.5 ENST00000505106.5 ENST00000515640.5 ENST00000647681.1 ENST00000649739.1 ENST00000650439.1 |
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| CDS GCA 72 bp | AGGGGTAACGTGCCTGGACCGCGCCTACCGGGAGCCTaGCGGCTCAGGAGGAGCCATCCTCAAGCACAGCAC | + |
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Preference number: 6 (lower is better) Translates to: RGNVPGPRLPGA*RLRRSHPQAQH Trigger: GTGCTGTGCTTGAGGATGGCTCCTCCTGAGCCGGCAGGCTCCCGGTAGGCGCGGTCCAGGCACGTTACCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS CCA 72 bp | ATTCGCAACCAAGGCGCCCCGGATCCAGGTCCATGCTaGGCGGAGTGGACCGCGAGGGGTAGGCGACCAGAC | + |
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Preference number: 6 (lower is better) Translates to: IRNQGAPDPGPC*AEWTARGRRPD Trigger: GTCTGGTCGCCTACCCCTCGCGGTCCACTCCGCCCAGCATGGACCTGGATCCGGGGCGCCTTGGTTGCGAAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000397835.4 ENST00000503940.5 ENST00000505106.5 ENST00000515640.5 ENST00000647681.1 ENST00000649739.1 ENST00000650439.1 |
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| CDS CCA 72 bp | AGGGGGCCCAGCCTGTGGGAACGGGGTGTCTGTGGGTaGAGGGAGAGGTGGTCGTGGGTGTGTGTGCGTGTG | + |
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Preference number: 6 (lower is better) Translates to: RGPSLWERGVCG*RERWSWVCVRV Trigger: CACACGCACACACACCCACGACCACCTCTCCCTCCACCCACAGACACCCCGTTCCCACAGGCTGGGCCCCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS TCA 72 bp | GGCGGCGCCAACCTGAGCTCCTGCCCGTTCTCGACGTaGCTGGGAGGCTTCAGGTCCTGCCAGAGGCGGTTT | + |
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Preference number: 6 (lower is better) Translates to: GGANLSSCPFST*LGGFRSCQRRF Trigger: AAACCGCCTCTGGCAGGACCTGAAGCCTCCCAGTCACGTCGAGAACGGGCAGGAGCTCAGGTTGGCGCCGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000397835.4 ENST00000515640.5 ENST00000647681.1 ENST00000650439.1 |
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| CDS TCA 72 bp | GCACCTGTAATGCCCACTGCACCGGCGGCGCCAACCTaGGCTCCTGCCCGTTCTCGACGTGACTGGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: APVMPTAPAAPT*APARSRRDWEA Trigger: AGCCTCCCAGTCACGTCGAGAACGGGCAGGAGCTCAGGTTGGCGCCGCCGGTGCAGTGGGCATTACAGGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000503940.5 ENST00000505106.5 ENST00000515640.5 ENST00000647681.1 ENST00000650439.1 |
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| CDS TCA 72 bp | TTGGCTGTAATGCCCACTGCACCGGCGGCGCCAACCTaGGCTCCTGCCCGTTCTCGACGTGACTGGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: LAVMPTAPAAPT*APARSRRDWEA Trigger: AGCCTCCCAGTCACGTCGAGAACGGGCAGGAGCTCAGGTTGGCGCCGCCGGTGCAGTGGGCATTACAGCCAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397835.4 |
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| CDS GCA 72 bp | CTAAATTCTTTGGCTGGACCGCGCCTACCGGGAGCCTaGCGGCTCAGGAGGAGCCATCCTCAAGCACAGCAC | + |
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Preference number: 6 (lower is better) Translates to: LNSLAGPRLPGA*RLRRSHPQAQH Trigger: GTGCTGTGCTTGAGGATGGCTCCTCCTGAGCCGGCAGGCTCCCGGTAGGCGCGGTCCAGCCAAAGAATTTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503940.5 ENST00000650439.1 |
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| CDS CAA 90 bp | GGGTGGAGGGAGAGGTGGTCGTGGGTGTGTGTGCGTGTGCGTGTGTaGAGATGGCCTGAAGAGGATGTGTGCAGGATGGGGGTGTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: GWRERWSWVCVRVRV*RWPEEDVCRMGVWF Trigger: AAACCACACCCCCATCCTGCACACATCCTCTTCAGGCCATCTCAACACACGCACACGCACACACACCCACGACCACCTCTCCCTCCACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS CCA 72 bp | TGGTCGTGGGTGTGTGTGCGTGTGCGTGTGTTGAGATaGCCTGAAGAGGATGTGTGCAGGATGGGGGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: WSWVCVRVRVLR*PEEDVCRMGVW Trigger: CCACACCCCCATCCTGCACACATCCTCTTCAGGCCATCTCAACACACGCACACGCACACACACCCACGACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS CAA 72 bp | GAGAGGTGGTCGTGGGTGTGTGTGCGTGTGCGTGTGTaGAGATGGCCTGAAGAGGATGTGTGCAGGATGGGG | + |
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Preference number: 6 (lower is better) Translates to: ERWSWVCVRVRV*RWPEEDVCRMG Trigger: CCCCATCCTGCACACATCCTCTTCAGGCCATCTCAACACACGCACACGCACACACACCCACGACCACCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS TCA 72 bp | CAGGACGGGAAGAGGCCATCTTCAAACTCCCAACACTaGGCTAAAGAGGGGGAAGGGCAGGCGGCGTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: QDGKRPSSNSQH*AKEGEGQAAFL Trigger: CAGAAACGCCGCCTGCCCTTCCCCCTCTTTAGCTCAGTGTTGGGAGTTTGAAGATGGCCTCTTCCCGTCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS CCA 72 bp | AGATGGCCTGAAGAGGATGTGTGCAGGATGGGGGTGTaGTTTGTAGGAAGAGTGGTGGGGGAGCAGTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: RWPEEDVCRMGV*FVGRVVGEQCG Trigger: CCCACACTGCTCCCCCACCACTCTTCCTACAAACCACACCCCCATCCTGCACACATCCTCTTCAGGCCATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS CAA 72 bp | CCAGGAAGCGCAAAAATGTCGCAGACTGTCGACGGCTaGCCCAACCCGGCTGCTTTCTCTCTCTCTCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: PGSAKMSQTVDG*PNPAAFSLSLF Trigger: AAACAGAGAGAGAGAGAAAGCAGCCGGGTTGGGCAAGCCGTCGACAGTCTGCGACATTTTTGCGCTTCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS GCA 72 bp | CAGGAAGCGCAAAAATGTCGCAGACTGTCGACGGCTTaGCCAACCCGGCTGCTTTCTCTCTCTCTCTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: QEAQKCRRLSTA*PTRLLSLSLCF Trigger: AAAACAGAGAGAGAGAGAAAGCAGCCGGGTTGGGCAAGCCGTCGACAGTCTGCGACATTTTTGCGCTTCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS CCA 72 bp | CATCCAGCGTGTGGGCCTCTCATTTACCCCTCTTCTTaGAGGAATTCCCTCCCAGGAAGCGCAAAAATGTCG | + |
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Preference number: 6 (lower is better) Translates to: HPACGPLIYPSS*RNSLPGSAKMS Trigger: CGACATTTTTGCGCTTCCTGGGAGGGAATTCCTCCAAGAAGAGGGGTAAATGAGAGGCCCACACGCTGGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS CAA 72 bp | CCATCCAGCGTGTGGGCCTCTCATTTACCCCTCTTCTaGGAGGAATTCCCTCCCAGGAAGCGCAAAAATGTC | + |
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Preference number: 6 (lower is better) Translates to: PSSVWASHLPLF*EEFPPRKRKNV Trigger: GACATTTTTGCGCTTCCTGGGAGGGAATTCCTCCAAGAAGAGGGGTAAATGAGAGGCCCACACGCTGGATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS CAA 90 bp | AATTCCCTCCCAGGAAGCGCAAAAATGTCGCAGACTGTCGACGGCTaGCCCAACCCGGCTGCTTTCTCTCTCTCTCTGTTTTTCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: NSLPGSAKMSQTVDG*PNPAAFSLSLFFSS Trigger: AGAGCTGAAAAACAGAGAGAGAGAGAAAGCAGCCGGGTTGGGCAAGCCGTCGACAGTCTGCGACATTTTTGCGCTTCCTGGGAGGGAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS CAA 90 bp | TTGTGTTTGCCATCCAGCGTGTGGGCCTCTCATTTACCCCTCTTCTaGGAGGAATTCCCTCCCAGGAAGCGCAAAAATGTCGCAGACTGT | + |
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Preference number: 6 (lower is better) Translates to: LCLPSSVWASHLPLF*EEFPPRKRKNVADC Trigger: ACAGTCTGCGACATTTTTGCGCTTCCTGGGAGGGAATTCCTCCAAGAAGAGGGGTAAATGAGAGGCCCACACGCTGGATGGCAAACACAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS GCA 72 bp | AATGTCGCAGACTGTCGACGGCTTGCCCAACCCGGCTaGTTTCTCTCTCTCTCTGTTTTTCAGCTCTATAGT | + |
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Preference number: 6 (lower is better) Translates to: NVADCRRLAQPG*FLSLSVFQLYS Trigger: ACTATAGAGCTGAAAAACAGAGAGAGAGAGAAAGCAGCCGGGTTGGGCAAGCCGTCGACAGTCTGCGACATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS TCA 72 bp | TCCCCGCCACTGCACGTGTCTGGTTATATATTTAATTaGTGTCAGAATCGACTGTATCCAGAGCAGACACTC | + |
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Preference number: 6 (lower is better) Translates to: SPPLHVSGYIFN*CQNRLYPEQTL Trigger: GAGTGTCTGCTCTGGATACAGTCGATTCTGACATCAATTAAATATATAACCAGACACGTGCAGTGGCGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS TCA 72 bp | TCGACTGTATCCAGAGCAGACACTCCAGCTCCAAACTaGGGATGTTTGTATAATAACTGGCTGTTTTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: STVSRADTPAPN*GCLYNNWLFSL Trigger: AAGAGAAAACAGCCAGTTATTATACAAACATCCTCAGTTTGGAGCTGGAGTGTCTGCTCTGGATACAGTCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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| CDS CCA 72 bp | AACAGGCAGCAGCGGTATGGAACATATAGATTTCAGTaGAGGAGTATAATTGCTAAGGGGAAAATACACACA | + |
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Preference number: 6 (lower is better) Translates to: NRQQRYGTYRFQ*RSIIAKGKIHT Trigger: TGTGTGTATTTTCCCCTTAGCAATTATACTCCTCCACTGAAATCTATATGTTCCATACCGCTGCTGCCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515640.5 |
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