RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C5ORF17 (Homo sapiens)

Ensembl gene IDs: ENSG00000248874

Ensembl transcript IDs: ENST00000507936.1, ENST00000512559.5

Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GCCTGCCAGTCCCGCGCCGCGCGCCCGCACTCCTCAGCCCTTGGGTaGTCGATGGGACTGGGCGCCCTGGAGCAGGGGGCGGCGCTCATC +
Preference number: 5 (lower is better)
Translates to: ACQSRAARPHSSALG*SMGLGALEQGAALI
Trigger: GATGAGCGCCGCCCCCTGCTCCAGGGCGCCCAGTCCCATCGACCACCCAAGGGCTGAGGAGTGCGGGCGCGCGGCGCGGGACTGGCAGGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507936.1
ENST00000512559.5
CDS GCA 90 bp GGAGGGTGTACTCCTCATTGCTCGGCCGCGGCGGGGCCAGCCGGCTaGTCCGAGTGCAGGGCCCGCCAAGCCCACGCCCACCCGGAACTC +
Preference number: 5 (lower is better)
Translates to: GGCTPHCSAAAGPAG*SECRARQAHAHPEL
Trigger: GAGTTCCGGGTGGGCGTGGGCTTGGCGGGCCCTGCACTCGGAGCAGCCGGCTGGCCCCGCCGCGGCCGAGCAATGAGGAGTACACCCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512559.5
CDS CCA 90 bp GCCCGCACTCCTCAGCCCTTGGGTGGTCGATGGGACTGGGCGCCCTaGAGCAGGGGGCGGCGCTCATCCGGGAGGCTCGGGCAGCACAGG +
Preference number: 5 (lower is better)
Translates to: ARTPQPLGGRWDWAP*SRGRRSSGRLGQHR
Trigger: CCTGTGCTGCCCGAGCCTCCCGGATGAGCGCCGCCCCCTGCTCCAGGGCGCCCAGTCCCATCGACCACCCAAGGGCTGAGGAGTGCGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507936.1
ENST00000512559.5
CDS GCA 90 bp CTCAGGAGCCCAGCTGGCTTCACCCAGTGGATCCCTCACCGGGGCTaGAGGTGGAGCTGCCTGCCAGTCCCGCGCCGCGCGCCCGCACTC +
Preference number: 5 (lower is better)
Translates to: LRSPAGFTQWIPHRG*RWSCLPVPRRAPAL
Trigger: GAGTGCGGGCGCGCGGCGCGGGACTGGCAGGCAGCTCCACCTGCAGCCCCGGTGAGGGATCCACTGGGTGAAGCCAGCTGGGCTCCTGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507936.1
ENST00000512559.5
CDS TCA 90 bp GTGGGAGGCTCAGGCATGGCGGGCTGCAGGTCCCGAGCCCTGCCCTaGGGGAAGGCAGCTAAGGCCCAGCGAGAAATCGAACGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: VGGSGMAGCRSRALP*GKAAKAQREIERSA
Trigger: GGCGCTGCGTTCGATTTCTCGCTGGGCCTTAGCTGCCTTCCCTCAGGGCAGGGCTCGGGACCTGCAGCCCGCCATGCCTGAGCCTCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512559.5
CDS GCA 90 bp CTAAGGCCCAGCGAGAAATCGAACGCAGCGCCGGTGGGCTGTCACTaGTGGGGTACCCAGTACACCCTCCACAGTCGCTGGCCCGGAGGG +
Preference number: 5 (lower is better)
Translates to: LRPSEKSNAAPVGCH*WGTQYTLHSRWPGG
Trigger: CCCTCCGGGCCAGCGACTGTGGAGGGTGTACTGGGTACCCCAGCAGTGACAGCCCACCGGCGCTGCGTTCGATTTCTCGCTGGGCCTTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512559.5
CDS GCA 90 bp GTGATTCACAGGAACTCACTTGGATGCTGCTGCCAACGTCATGTCTaGCAAATGCCTGCGCATCTTGCTACAGCTGTACTGGAATTCTTG +
Preference number: 5 (lower is better)
Translates to: VIHRNSLGCCCQRHV*QMPAHLATAVLEFL
Trigger: CAAGAATTCCAGTACAGCTGTAGCAAGATGCGCAGGCATTTGGCAGACATGACGTTGGCAGCAGCATCCAAGTGAGTTCCTGTGAATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512559.5
CDS TCA 90 bp AAAGCCACCTGCAATGGCACTAGTTGCTTGAATTCTCAAAGCGGGTaGTTCACAGGAACTCACTTGGATGCTGCTGCCAACGTCATGTCT +
Preference number: 5 (lower is better)
Translates to: KATCNGTSCLNSQSG*FTGTHLDAAANVMS
Trigger: AGACATGACGTTGGCAGCAGCATCCAAGTGAGTTCCTGTGAATCACCCGCTTTGAGAATTCAAGCAACTAGTGCCATTGCAGGTGGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512559.5
CDS CCA 90 bp CTGTTTCTTTCCTCATTGCTGAGAGTCCAGGTTTATTTGTCACACTaGTGGCTCCCAATTCCTCACCCTGAGGCCACTGAAGTACTGAAG +
Preference number: 5 (lower is better)
Translates to: LFLSSLLRVQVYLSH*WLPIPHPEATEVLK
Trigger: CTTCAGTACTTCAGTGGCCTCAGGGTGAGGAATTGGGAGCCACCAGTGTGACAAATAAACCTGGACTCTCAGCAATGAGGAAAGAAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512559.5
CDS CCA 90 bp TTTCTTTCCTCATTGCTGAGAGTCCAGGTTTATTTGTCACACTGGTaGCTCCCAATTCCTCACCCTGAGGCCACTGAAGTACTGAAGGTA +
Preference number: 5 (lower is better)
Translates to: FLSSLLRVQVYLSHW*LPIPHPEATEVLKV
Trigger: TACCTTCAGTACTTCAGTGGCCTCAGGGTGAGGAATTGGGAGCCACCAGTGTGACAAATAAACCTGGACTCTCAGCAATGAGGAAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512559.5
CDS CCA 90 bp GTTACCTGGTCACCGCAGTATGTGAGCTTTCTTTCCCCAACTTGTTaGTCTGTTTCTTTCCTCATTGCTGAGAGTCCAGGTTTATTTGTC +
Preference number: 5 (lower is better)
Translates to: VTWSPQYVSFLSPTC*SVSFLIAESPGLFV
Trigger: GACAAATAAACCTGGACTCTCAGCAATGAGGAAAGAAACAGACCAACAAGTTGGGGAAAGAAAGCTCACATACTGCGGTGACCAGGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507936.1
ENST00000512559.5
CDS CCA 90 bp TTTCTTTCCTCATTGCTGAGAGTCCAGGTTTATTTGTCACACTGGTaGCTCCCAATTCCTCACCCTGAAGTACTGAAGGTAATTCTTCAC +
Preference number: 5 (lower is better)
Translates to: FLSSLLRVQVYLSHW*LPIPHPEVLKVILH
Trigger: GTGAAGAATTACCTTCAGTACTTCAGGGTGAGGAATTGGGAGCCACCAGTGTGACAAATAAACCTGGACTCTCAGCAATGAGGAAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507936.1
CDS CCA 90 bp CTGTTTCTTTCCTCATTGCTGAGAGTCCAGGTTTATTTGTCACACTaGTGGCTCCCAATTCCTCACCCTGAAGTACTGAAGGTAATTCTT +
Preference number: 5 (lower is better)
Translates to: LFLSSLLRVQVYLSH*WLPIPHPEVLKVIL
Trigger: AAGAATTACCTTCAGTACTTCAGGGTGAGGAATTGGGAGCCACCAGTGTGACAAATAAACCTGGACTCTCAGCAATGAGGAAAGAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507936.1
CDS GCA 72 bp TGCTCGGCCGCGGCGGGGCCAGCCGGCTGCTCCGAGTaGAGGGCCCGCCAAGCCCACGCCCACCCGGAACTC +
Preference number: 6 (lower is better)
Translates to: CSAAAGPAGCSE*RARQAHAHPEL
Trigger: GAGTTCCGGGTGGGCGTGGGCTTGGCGGGCCCTGCACTCGGAGCAGCCGGCTGGCCCCGCCGCGGCCGAGCA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512559.5
CDS CCA 72 bp TCCCGCGCCGCGCGCCCGCACTCCTCAGCCCTTGGGTaGTCGATGGGACTGGGCGCCCTGGAGCAGGGGGCG +
Preference number: 6 (lower is better)
Translates to: SRAARPHSSALG*SMGLGALEQGA
Trigger: CGCCCCCTGCTCCAGGGCGCCCAGTCCCATCGACCACCCAAGGGCTGAGGAGTGCGGGCGCGCGGCGCGGGA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507936.1
ENST00000512559.5
CDS GCA 72 bp ACTCCTCATTGCTCGGCCGCGGCGGGGCCAGCCGGCTaGTCCGAGTGCAGGGCCCGCCAAGCCCACGCCCAC +
Preference number: 6 (lower is better)
Translates to: TPHCSAAAGPAG*SECRARQAHAH
Trigger: GTGGGCGTGGGCTTGGCGGGCCCTGCACTCGGAGCAGCCGGCTGGCCCCGCCGCGGCCGAGCAATGAGGAGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512559.5
CDS GCA 72 bp ACCCAGTGGATCCCTCACCGGGGCTGCAGGTGGAGCTaGCTGCCAGTCCCGCGCCGCGCGCCCGCACTCCTC +
Preference number: 6 (lower is better)
Translates to: TQWIPHRGCRWS*LPVPRRAPALL
Trigger: GAGGAGTGCGGGCGCGCGGCGCGGGACTGGCAGGCAGCTCCACCTGCAGCCCCGGTGAGGGATCCACTGGGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507936.1
ENST00000512559.5
CDS CCA 72 bp CCTCAGCCCTTGGGTGGTCGATGGGACTGGGCGCCCTaGAGCAGGGGGCGGCGCTCATCCGGGAGGCTCGGG +
Preference number: 6 (lower is better)
Translates to: PQPLGGRWDWAP*SRGRRSSGRLG
Trigger: CCCGAGCCTCCCGGATGAGCGCCGCCCCCTGCTCCAGGGCGCCCAGTCCCATCGACCACCCAAGGGCTGAGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507936.1
ENST00000512559.5
CDS CCA 72 bp GCCCGCACTCCTCAGCCCTTGGGTGGTCGATGGGACTaGGCGCCCTGGAGCAGGGGGCGGCGCTCATCCGGG +
Preference number: 6 (lower is better)
Translates to: ARTPQPLGGRWD*APWSRGRRSSG
Trigger: CCCGGATGAGCGCCGCCCCCTGCTCCAGGGCGCCCAGTCCCATCGACCACCCAAGGGCTGAGGAGTGCGGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507936.1
ENST00000512559.5
CDS CCA 72 bp GGGAGGCTCGGGCAGCACAGGAGCCAACGGAGGGGGTaGGAGGCTCAGGCATGGCGGGCTGCAGGTCCCGAG +
Preference number: 6 (lower is better)
Translates to: GRLGQHRSQRRG*EAQAWRAAGPE
Trigger: CTCGGGACCTGCAGCCCGCCATGCCTGAGCCTCCCACCCCCTCCGTTGGCTCCTGTGCTGCCCGAGCCTCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512559.5
CDS CAA 72 bp CCTCCACAGTCGCTGGCCCGGAGGGTGTACTCCTCATaGCTCGGCCGCGGCGGGGCCAGCCGGCTGCTCCGA +
Preference number: 6 (lower is better)
Translates to: PPQSLARRVYSS*LGRGGASRLLR
Trigger: TCGGAGCAGCCGGCTGGCCCCGCCGCGGCCGAGCAATGAGGAGTACACCCTCCGGGCCAGCGACTGTGGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512559.5
CDS CAA 90 bp CCAGTACACCCTCCACAGTCGCTGGCCCGGAGGGTGTACTCCTCATaGCTCGGCCGCGGCGGGGCCAGCCGGCTGCTCCGAGTGCAGGGC +
Preference number: 6 (lower is better)
Translates to: PVHPPQSLARRVYSS*LGRGGASRLLRVQG
Trigger: GCCCTGCACTCGGAGCAGCCGGCTGGCCCCGCCGCGGCCGAGCAATGAGGAGTACACCCTCCGGGCCAGCGACTGTGGAGGGTGTACTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512559.5
CDS GCA 72 bp GAGGCTCAGGCATGGCGGGCTGCAGGTCCCGAGCCCTaGCCTGAGGGAAGGCAGCTAAGGCCCAGCGAGAAA +
Preference number: 6 (lower is better)
Translates to: EAQAWRAAGPEP*PEGRQLRPSEK
Trigger: TTTCTCGCTGGGCCTTAGCTGCCTTCCCTCAGGGCAGGGCTCGGGACCTGCAGCCCGCCATGCCTGAGCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512559.5
CDS TCA 72 bp TCAGGCATGGCGGGCTGCAGGTCCCGAGCCCTGCCCTaGGGGAAGGCAGCTAAGGCCCAGCGAGAAATCGAA +
Preference number: 6 (lower is better)
Translates to: SGMAGCRSRALP*GKAAKAQREIE
Trigger: TTCGATTTCTCGCTGGGCCTTAGCTGCCTTCCCTCAGGGCAGGGCTCGGGACCTGCAGCCCGCCATGCCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512559.5
CDS GCA 72 bp AGCGAGAAATCGAACGCAGCGCCGGTGGGCTGTCACTaGTGGGGTACCCAGTACACCCTCCACAGTCGCTGG +
Preference number: 6 (lower is better)
Translates to: SEKSNAAPVGCH*WGTQYTLHSRW
Trigger: CCAGCGACTGTGGAGGGTGTACTGGGTACCCCAGCAGTGACAGCCCACCGGCGCTGCGTTCGATTTCTCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512559.5
CDS GCA 72 bp AGGAACTCACTTGGATGCTGCTGCCAACGTCATGTCTaGCAAATGCCTGCGCATCTTGCTACAGCTGTACTG +
Preference number: 6 (lower is better)
Translates to: RNSLGCCCQRHV*QMPAHLATAVL
Trigger: CAGTACAGCTGTAGCAAGATGCGCAGGCATTTGGCAGACATGACGTTGGCAGCAGCATCCAAGTGAGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512559.5
CDS GCA 72 bp CACTTGGATGCTGCTGCCAACGTCATGTCTGCCAAATaGCTGCGCATCTTGCTACAGCTGTACTGGAATTCT +
Preference number: 6 (lower is better)
Translates to: HLDAAANVMSAK*LRILLQLYWNS
Trigger: AGAATTCCAGTACAGCTGTAGCAAGATGCGCAGGCATTTGGCAGACATGACGTTGGCAGCAGCATCCAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512559.5
CDS CCA 72 bp TCCTCATTGCTGAGAGTCCAGGTTTATTTGTCACACTaGTGGCTCCCAATTCCTCACCCTGAGGCCACTGAA +
Preference number: 6 (lower is better)
Translates to: SSLLRVQVYLSH*WLPIPHPEATE
Trigger: TTCAGTGGCCTCAGGGTGAGGAATTGGGAGCCACCAGTGTGACAAATAAACCTGGACTCTCAGCAATGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512559.5
CDS GCA 72 bp TGGATGCTGCTGCCAACGTCATGTCTGCCAAATGCCTaGGCATCTTGCTACAGCTGTACTGGAATTCTTGTT +
Preference number: 6 (lower is better)
Translates to: WMLLPTSCLPNA*ASCYSCTGILV
Trigger: AACAAGAATTCCAGTACAGCTGTAGCAAGATGCGCAGGCATTTGGCAGACATGACGTTGGCAGCAGCATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512559.5
CDS CAA 90 bp CTTGTTGGTCTGTTTCTTTCCTCATTGCTGAGAGTCCAGGTTTATTaGTCACACTGGTGGCTCCCAATTCCTCACCCTGAGGCCACTGAA +
Preference number: 6 (lower is better)
Translates to: LVGLFLSSLLRVQVY*SHWWLPIPHPEATE
Trigger: TTCAGTGGCCTCAGGGTGAGGAATTGGGAGCCACCAGTGTGACAAATAAACCTGGACTCTCAGCAATGAGGAAAGAAACAGACCAACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512559.5
CDS CAA 90 bp CTTGTTGGTCTGTTTCTTTCCTCATTGCTGAGAGTCCAGGTTTATTaGTCACACTGGTGGCTCCCAATTCCTCACCCTGAAGTACTGAAG +
Preference number: 6 (lower is better)
Translates to: LVGLFLSSLLRVQVY*SHWWLPIPHPEVLK
Trigger: CTTCAGTACTTCAGGGTGAGGAATTGGGAGCCACCAGTGTGACAAATAAACCTGGACTCTCAGCAATGAGGAAAGAAACAGACCAACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507936.1
CDS TCA 72 bp TTCCCCAACTTGTTGGTCTGTTTCTTTCCTCATTGCTaGGAGTCCAGGTTTATTTGTCACACTGGTGGCTCC +
Preference number: 6 (lower is better)
Translates to: FPNLLVCFFPHC*ESRFICHTGGS
Trigger: GGAGCCACCAGTGTGACAAATAAACCTGGACTCTCAGCAATGAGGAAAGAAACAGACCAACAAGTTGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507936.1
ENST00000512559.5
CDS CCA 72 bp TCATTGCTGAGAGTCCAGGTTTATTTGTCACACTGGTaGCTCCCAATTCCTCACCCTGAAGTACTGAAGGTA +
Preference number: 6 (lower is better)
Translates to: SLLRVQVYLSHW*LPIPHPEVLKV
Trigger: TACCTTCAGTACTTCAGGGTGAGGAATTGGGAGCCACCAGTGTGACAAATAAACCTGGACTCTCAGCAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507936.1
CDS CAA 72 bp GCTTTGGCTTTAGTGTGTTCTTATTTCTTCAGTTCCTaGAGGTGTGAATTTAGGCTGTCTGTTTGCACTCTT +
Preference number: 6 (lower is better)
Translates to: ALALVCSYFFSS*RCEFRLSVCTL
Trigger: AAGAGTGCAAACAGACAGCCTAAATTCACACCTCAAGGAACTGAAGAAATAAGAACACACTAAAGCCAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512559.5