RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C5 (Homo sapiens)

Ensembl gene IDs: ENSG00000106804

Ensembl transcript IDs: ENST00000223642.3, ENST00000460578.1, ENST00000466280.1, ENST00000480188.1, ENST00000489802.1

Found 211 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp CAAACATTCCTGAGTGGTAGGTTTGAGGAGGTGTTCCAATTTATTGTTTCCGGTGAGTATCTGTCTTCATaGCCTCCAAGGCCATGTTAT +
Preference number: 2 (lower is better)
Translates to: QTFLSGRFEEVFQFIVSGEYLSS*PPRPCY
Trigger: ATAACATGGCCTTGGAGGGCATGAAGACAGATACTC...ACCGGAAACAATAAATTGGAACACCTCCTCAAACCTACCACTCAGGAATGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
3UTR-3UTR GCA 90 bp AGGTGTTCCAATTTATTGTTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCACAGGAGTCCATAAGTaGAAACTGTATGCAGCTGAA +
Preference number: 2 (lower is better)
Translates to: RCSNLLFPVSNNLGGVSVTGVHK*KLYAAE
Trigger: TTCAGCTGCATACAGTTTGCACTTATGGACTCCTGT...GACAGATACTCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGAACACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
3UTR GCA 72 bp CGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATaGCCTCCAAGGCCATGTTATTTCAGAAAGTTACAG +
Preference number: 3 (lower is better)
Translates to: RCPITLEEYLSS*PPRPCYFRKLQ
Trigger: CTGTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp TGTTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCATCAGCTCCGCCTCTaGACTCCCTTTGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: CFRCPITLEEYLSSCPPRHQLRL*TPFGEV
Trigger: CACCTCCCCAAAGGGAGTGCAGAGGCGGAGCTGATG...CCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp TTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCCTGGGCTTTCCGAAGTaGAGATTCCCTCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: FPVSNNLGGVSVFMPSKALGFPK*RFPPQQ
Trigger: CTGCTGTGGAGGGAATCTGCACTTCGGAAAGCCCAG...GGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp TTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCCCAGAGGAAGCACAGTaGATGTCACCAAGTGACTGG +
Preference number: 4 (lower is better)
Translates to: FPVSNNLGGVSVFMPSKAPEEAQ*MSPSDW
Trigger: CCAGTCACTTGGTGACATTCACTGTGCTTCCTCTGG...GGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp TTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCAATGATTCTTCCCTGCTaGGCTTGTAGCTGGCACATG +
Preference number: 4 (lower is better)
Translates to: FRCPITLEEYLSSCPPRPMILPC*ACSWHM
Trigger: CATGTGCCAGCTACAAGCCCAGCAGGGAAGAATCAT...TGGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp AGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACAGCACACATTGGCATTGTTaGGGCCACCACCTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: RSICLHALQGHVISESYSTHWHC*GHHLPH
Trigger: GTGGGGCAGGTGGTGGCCTCAACAATGCCAATGTGT...GCTGTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp TTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCCCACCTCCATACCTCTaGTCTTCTGATAGCCATTTG +
Preference number: 4 (lower is better)
Translates to: FPVSNNLGGVSVFMPSKAPPPYL*SSDSHL
Trigger: CAAATGGCTATCAGAAGAGCAGAGGTATGGAGGTGG...GGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp GGTTTGAGGAGGTGTTCCAATTTATTGTTTCCGGTGTCCAATAACCTTGGAGGAGCATCAGGAGACAGATaGACCTGGAGCTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: GLRRCSNLLFPVSNNLGGASGDR*TWSWLP
Trigger: TGGCAACCAGCTCCAGGTTCATCTGTCTCCTGATGC...TCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGAACACCTCCTCAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp TTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCGATTGTGTCCTGGGTTaGATAAAAGCCACCTCCATA +
Preference number: 4 (lower is better)
Translates to: FPVSNNLGGVSVFMPSKADCVLG*IKATSI
Trigger: TATGGAGGTGGCTTTTATTCAACCCAGGACACAATC...GGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp TTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCGATGCCAGGTATTTCTaGCTCTTCAGAAAATCCACC +
Preference number: 4 (lower is better)
Translates to: FPVSNNLGGVSVFMPSKADARYF*LFRKST
Trigger: GGTGGATTTTCTGAAGAGGCAGAAATACCTGGCATC...GGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp TTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCATCCGAATTTCTGGCTTaGTTACTGGTAACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: FRCPITLEEYLSSCPPRPSEFLA*LLVTGS
Trigger: AGACCCTGTTACCAGTAAGCAAGCCAGAAATTCGGA...TGGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp TTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCGTAAGTCCAGCTAGGTaGAACACATTGGCATTGTTG +
Preference number: 4 (lower is better)
Translates to: FPVSNNLGGVSVFMPSKAVSPAR*NTLALL
Trigger: CAACAATGCCAATGTGTTCCACCTAGCTGGACTTAC...GGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp TGTTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCTGTCTGTTCTCCTGTaGCGATGTAATAGACCAGAA +
Preference number: 4 (lower is better)
Translates to: CFRCPITLEEYLSSCPPRLSVLL*RCNRPE
Trigger: TTCTGGTCTATTACATCGTCACAGGAGAACAGACAG...CCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp TGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACTGCCCTGATGATCAATaGCTGGGCTTTCCGAAGTGC +
Preference number: 4 (lower is better)
Translates to: WRSICLHALQGHVISESYCPDDQ*LGFPKC
Trigger: GCACTTCGGAAAGCCCAGTCATTGATCATCAGGGCA...GTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp TTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCAGAAATGACATATGTTTaGTCCTGTCCCCAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: FRCPITLEEYLSSCPPRPEMTYV*SCPQVF
Trigger: GAAAACCTGGGGACAGGAGCAAACATATGTCATTTC...TGGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp TTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCGCAACTGTTTTCTTCTaGGAACAAGATGAACTTCCC +
Preference number: 4 (lower is better)
Translates to: FPVSNNLGGVSVFMPSKAATVFF*EQDELP
Trigger: GGGAAGTTCATCTTGTTCCCAGAAGAAAACAGTTGC...GGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp TTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCAGGTACACTGTTTATCTaGTCTGTGGTATTCGTACAC +
Preference number: 4 (lower is better)
Translates to: FRCPITLEEYLSSCPPRPGTLFI*SVVFVH
Trigger: GTGTACGAATACCACAGACCAGATAAACAGTGTACC...TGGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp GGTTTGAGGAGGTGTTCCAATTTATTGTTTCCGGTGTCCAATAACCTTGGAGGAGACCAGAAGTCGGGATaGAGGAACCATGTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: GLRRCSNLLFPVSNNLGGDQKSG*RNHVLC
Trigger: ACACAGAACATGGTTCCTTCATCCCGACTTCTGGTC...TCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGAACACCTCCTCAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp TTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCACATATACCAGTGTTTaGAATGCCAACGCCTTGAAT +
Preference number: 4 (lower is better)
Translates to: FPVSNNLGGVSVFMPSKATYTSV*NANALN
Trigger: ATTCAAGGCGTTGGCATTTCAAACACTGGTATATGT...GGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp TTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCGAAAAATTGATGTTGTaGAGGCCAATTTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: FPVSNNLGGVSVFMPSKAEKLML*RPISRG
Trigger: TCCTCTGGAAATTGGCCTTCACAACATCAATTTTTC...GGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp CTTCAACAACAGGAGTCCATAAGTGCAAACTGTATGCAGCTGAACTTCAGGAATCCCAGCAAACATTCCTaGGTGGTAGGTTTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LQQQESISANCMQLNFRNPSKHS*VVGLRR
Trigger: CCTCCTCAAACCTACCACTCAGGAATGTTTGCTGGG...ATTCCTGAAGTTCAGCTGCATACAGTTTGCACTTATGGACTCCTGTTGTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp GTTCCTTGGTATTTTCTTTCAAGCAAAGGCCATGTTTTTGTAATACTCCCTTTCGTTGAGGCCACCACCTaGCCCACAGCCCAGATCACT +
Preference number: 4 (lower is better)
Translates to: VPWYFLSSKGHVFVILPFVEATT*PTAQIT
Trigger: AGTGATCTGGGCTGTGGGGCAGGTGGTGGCCTCAAC...GAAAGGGAGTATTACAAAAACATGGCCTTTGCTTGAAAGAAAATACCAAGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp TGTTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGTCTTCTATCTTCTTTTaGAGCGTTCTTCTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: CFRCPITLEEYLSSCPPRSSIFF*SVLLGL
Trigger: CAGGCCAAGAAGAACGCTGCAAAAGAAGATAGAAGA...CCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp AGGTGTTCCAATTTATTGTTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCCAGCTTCTACACACTTaGACGCGGCTCCTTCACAGA +
Preference number: 4 (lower is better)
Translates to: RCSNLLFPVSNNLGGVSVQLLHT*TRLLHR
Trigger: TCTGTGAAGGAGCCGCGTGCAAGTGTGTAGAAGCTG...GACAGATACTCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGAACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp TTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCAGATATCCAGAAGGGTTaGCTTGTACTTGACAAAAAC +
Preference number: 4 (lower is better)
Translates to: FRCPITLEEYLSSCPPRPDIQKG*LVLDKN
Trigger: GTTTTTGTCAAGTACAAGGCAACCCTTCTGGATATC...TGGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp GGTTTGAGGAGGTGTTCCAATTTATTGTTTCCGGTGTCCAATAACCTTGGAGGATTCCCAAAAGGCCCATaGTTGGAGGTAGCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: GLRRCSNLLFPVSNNLGGFPKGP*LEVAGN
Trigger: GTTTCCTGCTACCTCCAACCATGGGCCTTTTGGGAA...TCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGAACACCTCCTCAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp TGTTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGAGACAGTTTCTCTTTTaGCTGGCTTCAAGTCGTCAT +
Preference number: 4 (lower is better)
Translates to: CFRCPITLEEYLSSCPPRRQFLF*LASSRH
Trigger: ATGACGACTTGAAGCCAGCCAAAAGAGAAACTGTCT...CCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp TTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTACACTTTTGCTTaGATCCAAGTCAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: FRCPITLEEYLSSCPPRPCYTFA*IQVRCL
Trigger: GAGACATCTGACTTGGATCCAAGCAAAAGTGTAACA...TGGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp AACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAATCTGGCGCACACATTTaGAGGACTTTGTGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: NLGGVSVFMPSKAMLFQKSGAHI*RTLCPD
Trigger: ATCAGGGCACAAAGTCCTCCAAATGTGTGCGCCAGA...TTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp GGTTTGAGGAGGTGTTCCAATTTATTGTTTCCGGTGTCCAATAACCTTGGAGGACTCCCTTTGGGGAGGTaGGTTAGGATATTGATGCCT +
Preference number: 4 (lower is better)
Translates to: GLRRCSNLLFPVSNNLGGLPLGR*VRILMP
Trigger: AGGCATCAATATCCTAACCCACCTCCCCAAAGGGAG...TCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGAACACCTCCTCAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp TGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACTGCTGGGCTTGTAGCTaGCACATGCTACTATGCGTT +
Preference number: 4 (lower is better)
Translates to: WRSICLHALQGHVISESYCWACS*HMLLCV
Trigger: AACGCATAGTAGCATGTGCCAGCTACAAGCCCAGCA...GTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
3UTR CAA 72 bp GGTGTTCCAATTTATTGTTTCCGGTGTCCAATAACCTaGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: GVPIYCFRCPIT*EEYLSSCPPRP
Trigger: TGGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGAACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp TTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCTGCGGTTCCAGTTGTTaGAAAGTCCTCTTTATATTT +
Preference number: 4 (lower is better)
Translates to: FPVSNNLGGVSVFMPSKACGSSC*KVLFIF
Trigger: AAATATAAAGAGGACTTTTCAACAACTGGAACCGCA...GGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp TTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCAAGTATGACAGTTCTTTaGCTGCTGTTTCAGAATCAA +
Preference number: 4 (lower is better)
Translates to: FRCPITLEEYLSSCPPRPSMTVL*LLFQNQ
Trigger: TTGATTCTGAAACAGCAGTCAAAGAACTGTCATACT...TGGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp TTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCAAACCAAGTCTCCAGTaGAAAATTGATGTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: FPVSNNLGGVSVFMPSKAKPSLQ*KIDVVK
Trigger: CTTCACAACATCAATTTTTCACTGGAGACTTGGTTT...GGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp AGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACAGCAATAGCTTTCCCTTTTaGCACCTTCTGGCACCACTC +
Preference number: 4 (lower is better)
Translates to: RSICLHALQGHVISESYSNSFPF*HLLAPL
Trigger: GAGTGGTGCCAGAAGGTGTCAAAAGGGAAAGCTATT...GCTGTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp AACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAATTGTTTAACCAGGAGTaGATATTCCGTCAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: NLGGVSVFMPSKAMLFQKLFNQE*IFRQAL
Trigger: GAGGGCCTGACGGAATATTCACTCCTGGTTAAACAA...TTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp GGTTTGAGGAGGTGTTCCAATTTATTGTTTCCGGTGTCCAATAACCTTGGAGGAATGTCCATCACCGCATaGGAGGATCCAGATGATGAT +
Preference number: 4 (lower is better)
Translates to: GLRRCSNLLFPVSNNLGGMSITA*EDPDDD
Trigger: ATCATCATCTGGATCCTCTCATGCGGTGATGGACAT...TCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGAACACCTCCTCAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp CCCCAGCAAACATTCCTGAGTGGTAGGTTTGAGGAGGTGTTCCAATTTATTGTTATCCGTGCAGCTCGCTaGTCACAGGTTTCATCATTA +
Preference number: 4 (lower is better)
Translates to: PQQTFLSGRFEEVFQFIVIRAAR*SQVSSL
Trigger: TAATGATGAAACCTGTGAGCAGCGAGCTGCACGGAT...AACAATAAATTGGAACACCTCCTCAAACCTACCACTCAGGAATGTTTGCTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp TATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACAGCATTTGAGCACGGAGCTGGCTTaGGACGACACAACATTCAGT +
Preference number: 4 (lower is better)
Translates to: YLSSCPPRPCYFRKLQHLSTELA*DDTTFS
Trigger: ACTGAATGTTGTGTCGTCGCAAGCCAGCTCCGTGCT...CAAATGCTGTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp AGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACAGCCACCTTGATGGGATATaGAATCCCAGGCTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: RSICLHALQGHVISESYSHLDGI*NPRLQE
Trigger: TTCCTGAAGCCTGGGATTCCATATCCCATCAAGGTG...GCTGTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp GGTTTGAGGAGGTGTTCCAATTTATTGTTTCCGGTGTCCAATAACCTTGGAGGATGCATTCAGTGTTACTaGGACTCCTCCTACCAACTG +
Preference number: 4 (lower is better)
Translates to: GLRRCSNLLFPVSNNLGGCIQCY*DSSYQL
Trigger: CAGTTGGTAGGAGGAGTCCCAGTAACACTGAATGCA...TCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGAACACCTCCTCAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp TATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACAGCATTTGGAGCCCTCTACTTTCTaGCGCACACATTTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: YLSSCPPRPCYFRKLQHLEPSTF*RTHLED
Trigger: GTCCTCCAAATGTGTGCGCCAGAAAGTAGAGGGCTC...CAAATGCTGTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp TGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACAAAGGTGCTCTGGGCTaGCAGTGTATTTTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: WRSICLHALQGHVISESYKGALG*QCIFKQ
Trigger: CTGCTTGAAAATACACTGCCAGCCCAGAGCACCTTT...GTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp TGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACACTTTGGCTGAGAGATaGGTATGCTATTGCTCGGTA +
Preference number: 4 (lower is better)
Translates to: WRSICLHALQGHVISESYTLAER*VCYCSV
Trigger: TACCGAGCAATAGCATACTCATCTCTCAGCCAAAGT...GTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp TGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACTCAAGTTCAGACTGGTaGGTAAAGCATAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: WRSICLHALQGHVISESYSSSDW*VKHRQL
Trigger: CAACTGCCTATGCTTTACTCACCAGTCTGAACTTGA...GTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp AGGTGTTCCAATTTATTGTTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTGGCCTGGAGAATATaGATCTGCATCAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: RCSNLLFPVSNNLGGVSVLAWRI*ICIRRQ
Trigger: CTGTCTCCTGATGCAGATGCATATTCTCCAGGCCAA...GACAGATACTCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGAACACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp TGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACTCAGGTAGGGCAAACTaGAACTGTTTTCTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: WRSICLHALQGHVISESYSGRAN*NCFLLG
Trigger: TCCCAGAAGAAAACAGTTGCAGTTTGCCCTACCTGA...GTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp TGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACGGCCTGATTTTCTTCTaGAAGATCTGGAGCATCAGT +
Preference number: 4 (lower is better)
Translates to: WRSICLHALQGHVISESYGLIFF*KIWSIS
Trigger: ACTGATGCTCCAGATCTTCCAGAAGAAAATCAGGCC...GTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp GGTTTGAGGAGGTGTTCCAATTTATTGTTTCCGGTGTCCAATAACCTTGGAGGATTTTTGGCTCCTCTTTaGACTCCATACACAGCACTG +
Preference number: 4 (lower is better)
Translates to: GLRRCSNLLFPVSNNLGGFLAPL*TPYTAL
Trigger: CAGTGCTGTGTATGGAGTCCAAAGAGGAGCCAAAAA...TCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGAACACCTCCTCAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp GGTTTGAGGAGGTGTTCCAATTTATTGTTTCCGGTGTCCAATAACCTTGGAGGAAATACTCCCTTTCAATaGACTGTTCTTTCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GLRRCSNLLFPVSNNLGGNTPFQ*TVLSAP
Trigger: TGGGGCCGAAAGAACAGTCCATTGAAAGGGAGTATT...TCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGAACACCTCCTCAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp TCCAATTTATTGTTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCTTCTGGGAACAAGATaGACTTCCCACAACCAGCTT +
Preference number: 4 (lower is better)
Translates to: SNLLFPVSNNLGGVSVFMLLGTR*TSHNQL
Trigger: AAGCTGGTTGTGGGAAGTTCATCTTGTTCCCAGAAG...CATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp CCCCAGCAAACATTCCTGAGTGGTAGGTTTGAGGAGGTGTTCCAATTTATTGTTATATTGATGCCTTCCTaGCTTAGAACTGCAGACAAG +
Preference number: 4 (lower is better)
Translates to: PQQTFLSGRFEEVFQFIVILMPS*LRTADK
Trigger: CTTGTCTGCAGTTCTAAGTCAGGAAGGCATCAATAT...AACAATAAATTGGAACACCTCCTCAAACCTACCACTCAGGAATGTTTGCTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp CAAACATTCCTGAGTGGTAGGTTTGAGGAGGTGTTCCAATTTATTGTTTCCGGTGGTGGGTTAGGATATTaGTGCCTTCCTGACTTAGAA +
Preference number: 4 (lower is better)
Translates to: QTFLSGRFEEVFQFIVSGGGLGY*CLPDLE
Trigger: TTCTAAGTCAGGAAGGCATCAATATCCTAACCCACC...ACCGGAAACAATAAATTGGAACACCTCCTCAAACCTACCACTCAGGAATGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp TGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACAAATGCTTGACACGATaGACATGTTGTGTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: WRSICLHALQGHVISESYKCLTR*TCCVSR
Trigger: CCTAGAGACACAACATGTTCATCGTGTCAAGCATTT...GTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp AGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACAGCTGGAGAATATGCATCTaGATCAGGAGACAGATGAAC +
Preference number: 4 (lower is better)
Translates to: RSICLHALQGHVISESYSWRICI*IRRQMN
Trigger: GTTCATCTGTCTCCTGATGCAGATGCATATTCTCCA...GCTGTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp GGTTTGAGGAGGTGTTCCAATTTATTGTTTCCGGTGTCCAATAACCTTGGAGGATACCAGTGTTTGAAATaGCAACGCCTTGAATTTCCC +
Preference number: 4 (lower is better)
Translates to: GLRRCSNLLFPVSNNLGGYQCLK*QRLEFP
Trigger: GGGAAATTCAAGGCGTTGGCATTTCAAACACTGGTA...TCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGAACACCTCCTCAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp CTTCAACAACAGGAGTCCATAAGTGCAAACTGTATGCAGCTGAACTTCAGGAATTGTTTCTACCATACGTaGCGTACCAGTGTTAGGTAC +
Preference number: 4 (lower is better)
Translates to: LQQQESISANCMQLNFRNCFYHT*RTSVRY
Trigger: GTACCTAACACTGGTACGGCACGTATGGTAGAAACA...ATTCCTGAAGTTCAGCTGCATACAGTTTGCACTTATGGACTCCTGTTGTTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp AGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACAGCCTTGTAGCTGGCACATaGTACTATGCGTTTGTAATC +
Preference number: 4 (lower is better)
Translates to: RSICLHALQGHVISESYSLVAGT*YYAFVI
Trigger: GATTACAAACGCATAGTAGCATGTGCCAGCTACAAG...GCTGTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp TGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACACAGGAGTCCATAAGTaGAAACTGTATGCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: WRSICLHALQGHVISESYTGVHK*KLYAAE
Trigger: TTCAGCTGCATACAGTTTGCACTTATGGACTCCTGT...GTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp TCCAATTTATTGTTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCTCGGTAACCTTCCCTaGCCTGATTTTCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SNLLFPVSNNLGGVSVFMLGNLP*PDFLLE
Trigger: TTCCAGAAGAAAATCAGGCCAGGGAAGGTTACCGAG...CATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp AGGTGTTCCAATTTATTGTTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCCTTGAATTTCCCAGGTaGTTAGAGAATCAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: RCSNLLFPVSNNLGGVSVLEFPR*LENQVG
Trigger: CCCTACCTGATTCTCTAACCACCTGGGAAATTCAAG...GACAGATACTCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGAACACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp AGGTGTTCCAATTTATTGTTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCCTGATGATCAATGACTaGGCTTTCCGAAGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: RCSNLLFPVSNNLGGVSVLMIND*AFRSAD
Trigger: ATCTGCACTTCGGAAAGCCCAGTCATTGATCATCAG...GACAGATACTCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGAACACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp AACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAATACCATGTCAACTTCTaGTCCTTCAGGATCTATGAA +
Preference number: 4 (lower is better)
Translates to: NLGGVSVFMPSKAMLFQKYHVNF*SFRIYE
Trigger: TTCATAGATCCTGAAGGATCAGAAGTTGACATGGTA...TTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp AACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAATATTCTGGCTCGATTaGGACAGAAAAATGTGGCAA +
Preference number: 4 (lower is better)
Translates to: NLGGVSVFMPSKAMLFQKIFWLD*DRKMWQ
Trigger: TTGCCACATTTTTCTGTCTCAATCGAGCCAGAATAT...TTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp CAAACATTCCTGAGTGGTAGGTTTGAGGAGGTGTTCCAATTTATTGTTTCCGGTGCGTTCTTCTTGGCCTaGGAATTTCTTTACAAGGTT +
Preference number: 4 (lower is better)
Translates to: QTFLSGRFEEVFQFIVSGAFFLA*EFLYKV
Trigger: AACCTTGTAAAGAAATTCTCAGGCCAAGAAGAACGC...ACCGGAAACAATAAATTGGAACACCTCCTCAAACCTACCACTCAGGAATGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp AGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACAGCAATTGCATGTCTTTATaGGAGATATTAGCACGGAGC +
Preference number: 4 (lower is better)
Translates to: RSICLHALQGHVISESYSNCMSL*EILARS
Trigger: GCTCCGTGCTAATATCTCTCATAAAGACATGCAATT...GCTGTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp TGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACGAACCTGGAGCTGGTTaGCACATTTTTCTTCAATAT +
Preference number: 4 (lower is better)
Translates to: WRSICLHALQGHVISESYEPGAG*HIFLQY
Trigger: ATATTGAAGAAAAATGTGGCAACCAGCTCCAGGTTC...GTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp AACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAATCTTTGAACACCTTTaGCTTGACAGTATCAGCAAC +
Preference number: 4 (lower is better)
Translates to: NLGGVSVFMPSKAMLFQKIFEHL*LDSISN
Trigger: GTTGCTGATACTGTCAAGGCAAAGGTGTTCAAAGAT...TTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp AGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACAGCTGGCACATGCTACTATaGGTTTGTAATCAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: RSICLHALQGHVISESYSWHMLL*VCNQSF
Trigger: GAAACTCTGATTACAAACGCATAGTAGCATGTGCCA...GCTGTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp TATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACAGCATTTGGAGTATCTGTCTTCATaGCCTCCAAGGCCATGTTAT +
Preference number: 4 (lower is better)
Translates to: YLSSCPPRPCYFRKLQHLEYLSS*PPRPCY
Trigger: ATAACATGGCCTTGGAGGGCATGAAGACAGATACTC...CAAATGCTGTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp CCCCAGCAAACATTCCTGAGTGGTAGGTTTGAGGAGGTGTTCCAATTTATTGTTAGTTTCTCTTTTGGCTaGCTTCAAGTCGTCATTCAA +
Preference number: 4 (lower is better)
Translates to: PQQTFLSGRFEEVFQFIVSFSFG*LQVVIQ
Trigger: TTGAATGACGACTTGAAGCCAGCCAAAAGAGAAACT...AACAATAAATTGGAACACCTCCTCAAACCTACCACTCAGGAATGTTTGCTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp TGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACACAGTTCCTTTCAATTaGATCTGTTCTCCTCGTACA +
Preference number: 4 (lower is better)
Translates to: WRSICLHALQGHVISESYTVPFN*ICSPRT
Trigger: TGTACGAGGAGAACAGATCCAATTGAAAGGAACTGT...GTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp CTTCAACAACAGGAGTCCATAAGTGCAAACTGTATGCAGCTGAACTTCAGGAATAATGTAAAGGTGCTCTaGGCTGGCAGTGTATTTTCA +
Preference number: 4 (lower is better)
Translates to: LQQQESISANCMQLNFRNNVKVL*AGSVFS
Trigger: TGAAAATACACTGCCAGCCCAGAGCACCTTTACATT...ATTCCTGAAGTTCAGCTGCATACAGTTTGCACTTATGGACTCCTGTTGTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp CAAACATTCCTGAGTGGTAGGTTTGAGGAGGTGTTCCAATTTATTGTTTCCGGTTTTTTGGTGCTGAAATaGCATATGTTTGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: QTFLSGRFEEVFQFIVSGFLVLK*HMFAPV
Trigger: GACAGGAGCAAACATATGTCATTTCAGCACCAAAAA...ACCGGAAACAATAAATTGGAACACCTCCTCAAACCTACCACTCAGGAATGTTTG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp AACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAACAGGTTTGTCTGTATaGATGAAGAGAAATCCATTG +
Preference number: 4 (lower is better)
Translates to: NLGGVSVFMPSKAMLFQKTGLSV*MKRNPL
Trigger: CAATGGATTTCTCTTCATTCATACAGACAAACCTGT...TTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp GGTTTGAGGAGGTGTTCCAATTTATTGTTTCCGGTGTCCAATAACCTTGGAGGAATCCTTCAGGATCTATaGAAGTTAAGACAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: GLRRCSNLLFPVSNNLGGILQDL*KLRQFL
Trigger: GAGAAACTGTCTTAACTTTCATAGATCCTGAAGGAT...TCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGAACACCTCCTCAAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp CTTCAACAACAGGAGTCCATAAGTGCAAACTGTATGCAGCTGAACTTCAGGAATAAAGGTAACTTTGGCTaGGAGATGAGTATGCTATTG +
Preference number: 4 (lower is better)
Translates to: LQQQESISANCMQLNFRNKGNFG*EMSMLL
Trigger: CAATAGCATACTCATCTCTCAGCCAAAGTTACCTTT...ATTCCTGAAGTTCAGCTGCATACAGTTTGCACTTATGGACTCCTGTTGTTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp TTTCCTGTTCCTTGGTATTTTCTTTCAAGCAAAGGCCATGTTTTTGTAATACTCGGCCCTCAATGGCATTaGTTGTGTCCTGGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: FPVPWYFLSSKGHVFVILGPQWH*LCPGLN
Trigger: ATTCAACCCAGGACACAATCAATGCCATTGAGGGCC...GAGTATTACAAAAACATGGCCTTTGCTTGAAAGAAAATACCAAGGAACAGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp CAAACATTCCTGAGTGGTAGGTTTGAGGAGGTGTTCCAATTTATTGTTTCCGGTTTCTTGGGAGTCATCTaGATTTGCATTAGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: QTFLSGRFEEVFQFIVSGFLGVI*ICISEE
Trigger: TTCCTCACTAATGCAAATGCAGATGACTCCCAAGAA...ACCGGAAACAATAAATTGGAACACCTCCTCAAACCTACCACTCAGGAATGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp AGGTGTTCCAATTTATTGTTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTGCAGCGTTCTTCTTaGCCTGAGAATTTCTTTACA +
Preference number: 4 (lower is better)
Translates to: RCSNLLFPVSNNLGGVSVLQRSS*PENFFT
Trigger: TGTAAAGAAATTCTCAGGCCAAGAAGAACGCTGCAA...GACAGATACTCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGAACACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp GTTCCTTGGTATTTTCTTTCAAGCAAAGGCCATGTTTTTGTAATACTCCCTTTCATATTAGCACGGAGCTaGCTTGCGACGACACAACAT +
Preference number: 4 (lower is better)
Translates to: VPWYFLSSKGHVFVILPFILARS*LATTQH
Trigger: ATGTTGTGTCGTCGCAAGCCAGCTCCGTGCTAATAT...GAAAGGGAGTATTACAAAAACATGGCCTTTGCTTGAAAGAAAATACCAAGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp AGGTGTTCCAATTTATTGTTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCAAAAACATAGAATACTaGGACAACGCTCATCAGCTC +
Preference number: 4 (lower is better)
Translates to: RCSNLLFPVSNNLGGVSVKNIEY*DNAHQL
Trigger: GAGCTGATGAGCGTTGTCCCAGTATTCTATGTTTTT...GACAGATACTCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGAACACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp GTTCCTTGGTATTTTCTTTCAAGCAAAGGCCATGTTTTTGTAATACTCCCTTTCGAGAAGCACCTCTACTaGCCTCCCAAGGAAATTCTT +
Preference number: 4 (lower is better)
Translates to: VPWYFLSSKGHVFVILPFEKHLY*PPKEIL
Trigger: AAGAATTTCCTTGGGAGGCCAGTAGAGGTGCTTCTC...GAAAGGGAGTATTACAAAAACATGGCCTTTGCTTGAAAGAAAATACCAAGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp TCCAATTTATTGTTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCTTCCTCAGAGGTACTaGTTTTGTGAACTACAGTTG +
Preference number: 4 (lower is better)
Translates to: SNLLFPVSNNLGGVSVFMLPQRY*FCELQL
Trigger: CAACTGTAGTTCACAAAACCAGTACCTCTGAGGAAG...CATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp AGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACAGCTGTTTATCTGGTCTGTaGTATTCGTACACTGTGAAA +
Preference number: 4 (lower is better)
Translates to: RSICLHALQGHVISESYSCLSGL*YSYTVK
Trigger: TTTCACAGTGTACGAATACCACAGACCAGATAAACA...GCTGTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp TATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACAGCATTTGGAGGTACTGGTTTTGTaGACTACAGTTGTTACATGT +
Preference number: 4 (lower is better)
Translates to: YLSSCPPRPCYFRKLQHLEVLVL*TTVVTC
Trigger: ACATGTAACAACTGTAGTTCACAAAACCAGTACCTC...CAAATGCTGTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp CTTCAACAACAGGAGTCCATAAGTGCAAACTGTATGCAGCTGAACTTCAGGAATTTAGCTAAAAATGCTTaGCACGATGAACATGTTGTG +
Preference number: 4 (lower is better)
Translates to: LQQQESISANCMQLNFRNLAKNA*HDEHVV
Trigger: CACAACATGTTCATCGTGTCAAGCATTTTTAGCTAA...ATTCCTGAAGTTCAGCTGCATACAGTTTGCACTTATGGACTCCTGTTGTTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp TATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACAGCATTTGCAAACTGTATGCAGCTaGACTTCAGGAATTTTAGCA +
Preference number: 4 (lower is better)
Translates to: YLSSCPPRPCYFRKLQHLQTVCS*TSGILA
Trigger: TGCTAAAATTCCTGAAGTTCAGCTGCATACAGTTTG...CAAATGCTGTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp AGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACAGCACTAGCAAAGCCTTATaGTTATCAGTCCAATCAATA +
Preference number: 4 (lower is better)
Translates to: RSICLHALQGHVISESYSTSKAL*LSVQSI
Trigger: TATTGATTGGACTGATAACCATAAGGCTTTGCTAGT...GCTGTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp TATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACAGCATTTGCCACAACCAGCTTTCTaGAAAATAACTCCGAATTTC +
Preference number: 4 (lower is better)
Translates to: YLSSCPPRPCYFRKLQHLPQPAF*KITPNF
Trigger: GAAATTCGGAGTTATTTTCCAGAAAGCTGGTTGTGG...CAAATGCTGTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp TTGGTATTTTCTTTCAAGCAAAGGCCATGTTTTTGTAATACTCCCTTTCAATGGGAGAGAGGACATATTTaGTGCCAGGTATTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LVFSFKQRPCFCNTPFQWERGHI*CQVFLP
Trigger: AGGCAGAAATACCTGGCATCAAATATGTCCTCTCTC...CCATTGAAAGGGAGTATTACAAAAACATGGCCTTTGCTTGAAAGAAAATACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp TATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACAGCATTTGTCTCCAGTGAAAAATTaGTGTTGTGAAGGCCAATTT +
Preference number: 4 (lower is better)
Translates to: YLSSCPPRPCYFRKLQHLSPVKN*CCEGQF
Trigger: AAATTGGCCTTCACAACATCAATTTTTCACTGGAGA...CAAATGCTGTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp GTTCCTTGGTATTTTCTTTCAAGCAAAGGCCATGTTTTTGTAATACTCCCTTTCCACGTGTTACACTTTTaGTTGGATCCAAGTCAGATG +
Preference number: 4 (lower is better)
Translates to: VPWYFLSSKGHVFVILPFHVLHF*LDPSQM
Trigger: CATCTGACTTGGATCCAAGCAAAAGTGTAACACGTG...GAAAGGGAGTATTACAAAAACATGGCCTTTGCTTGAAAGAAAATACCAAGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp TTGGTATTTTCTTTCAAGCAAAGGCCATGTTTTTGTAATACTCCCTTTCAATGGACTCCTCCTACCAACTaGTCAAGCGAATCTTTAACC +
Preference number: 4 (lower is better)
Translates to: LVFSFKQRPCFCNTPFQWTPPTN*SSESLT
Trigger: GGTTAAAGATTCGCTTGACCAGTTGGTAGGAGGAGT...CCATTGAAAGGGAGTATTACAAAAACATGGCCTTTGCTTGAAAGAAAATACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp TTTCCTGTTCCTTGGTATTTTCTTTCAAGCAAAGGCCATGTTTTTGTAATACTCTCCCTCGTGCCAAAGTaGATAATTTTGCCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: FPVPWYFLSSKGHVFVILSLVPK*IILPLD
Trigger: ATCCAAGGGCAAAATTATCCACTTTGGCACGAGGGA...GAGTATTACAAAAACATGGCCTTTGCTTGAAAGAAAATACCAAGGAACAGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR TCA 90 bp GTTCCTTGGTATTTTCTTTCAAGCAAAGGCCATGTTTTTGTAATACTCCCTTTCCTCTTATTCCAAATGTaGTATAAACGTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: VPWYFLSSKGHVFVILPFLLFQM*YKRQPQ
Trigger: CTGAGGCTGACGTTTATATCACATTTGGAATAAGAG...GAAAGGGAGTATTACAAAAACATGGCCTTTGCTTGAAAGAAAATACCAAGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp TTGGTATTTTCTTTCAAGCAAAGGCCATGTTTTTGTAATACTCCCTTTCAATGGGGAGTCATCTGCATTTaGATTAGTGAGGAAGGTAAG +
Preference number: 4 (lower is better)
Translates to: LVFSFKQRPCFCNTPFQWGVICI*ISEEGK
Trigger: CTTACCTTCCTCACTAATGCAAATGCAGATGACTCC...CCATTGAAAGGGAGTATTACAAAAACATGGCCTTTGCTTGAAAGAAAATACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp TTGGTATTTTCTTTCAAGCAAAGGCCATGTTTTTGTAATACTCCCTTTCAATGGAGATCCAATTCTTCCTaGATTTGCCCACAATCAGCT +
Preference number: 4 (lower is better)
Translates to: LVFSFKQRPCFCNTPFQWRSNSS*ICPQSA
Trigger: AGCTGATTGTGGGCAAATGCAGGAAGAATTGGATCT...CCATTGAAAGGGAGTATTACAAAAACATGGCCTTTGCTTGAAAGAAAATACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CCA 90 bp TATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACAGCATTTGAAAACGATAAATGGGTaGATTACCTTTAACCAAAGC +
Preference number: 4 (lower is better)
Translates to: YLSSCPPRPCYFRKLQHLKTING*ITFNQS
Trigger: GCTTTGGTTAAAGGTAATCCACCCATTTATCGTTTT...CAAATGCTGTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp GTTCCTTGGTATTTTCTTTCAAGCAAAGGCCATGTTTTTGTAATACTCCCTTTCTACATCAATTGTTTGTaGATTCAGTGTTACTGGGAC +
Preference number: 4 (lower is better)
Translates to: VPWYFLSSKGHVFVILPFYINCL*IQCYWD
Trigger: GTCCCAGTAACACTGAATGCACAAACAATTGATGTA...GAAAGGGAGTATTACAAAAACATGGCCTTTGCTTGAAAGAAAATACCAAGGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR GCA 90 bp TTGGTATTTTCTTTCAAGCAAAGGCCATGTTTTTGTAATACTCCCTTTCAATGGGGAATCCATTCCAGTTaGCATATTAAGAGACACAGT +
Preference number: 4 (lower is better)
Translates to: LVFSFKQRPCFCNTPFQWGIHSS*HIKRHS
Trigger: ACTGTGTCTCTTAATATGGCAACTGGAATGGATTCC...CCATTGAAAGGGAGTATTACAAAAACATGGCCTTTGCTTGAAAGAAAATACCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS TCA 90 bp TCAGCTCCGCCTCTGCACTCCCTTTGGGGAGGTGGGTTAGGATATTaGTGCCTTCCTGACTTAGAACTGCAGACAAGATCTCACCTACAA +
Preference number: 5 (lower is better)
Translates to: SAPPLHSLWGGGLGY*CLPDLELQTRSHLQ
Trigger: TTGTAGGTGAGATCTTGTCTGCAGTTCTAAGTCAGGAAGGCATCAATATCCTAACCCACCTCCCCAAAGGGAGTGCAGAGGCGGAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS TCA 90 bp CTTTCTGGCGCACACATTTGGAGGACTTTGTGCCCTGATGATCAATaGCTGGGCTTTCCGAAGTGCAGATTCCCTCCACAGCAGACATTT +
Preference number: 5 (lower is better)
Translates to: LSGAHIWRTLCPDDQ*LGFPKCRFPPQQTF
Trigger: AAATGTCTGCTGTGGAGGGAATCTGCACTTCGGAAAGCCCAGTCATTGATCATCAGGGCACAAAGTCCTCCAAATGTGTGCGCCAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS CCA 90 bp CTGGCGCACACATTTGGAGGACTTTGTGCCCTGATGATCAATGACTaGGCTTTCCGAAGTGCAGATTCCCTCCACAGCAGACATTTTAAC +
Preference number: 5 (lower is better)
Translates to: LAHTFGGLCALMIND*AFRSADSLHSRHFN
Trigger: GTTAAAATGTCTGCTGTGGAGGGAATCTGCACTTCGGAAAGCCCAGTCATTGATCATCAGGGCACAAAGTCCTCCAAATGTGTGCGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp CCCCAGCAAACATTCCTGAGTGGTAGGTTTGAGGAGGTGTTCCAATTTATTGTTCCAAAAGGCCCATGGTaGGAGGTAGCAGGAAACCAC +
Preference number: 5 (lower is better)
Translates to: PQQTFLSGRFEEVFQFIVPKGPW*EVAGNH
Trigger: GTGGTTTCCTGCTACCTCCAACCATGGGCCTTTTGG...AACAATAAATTGGAACACCTCCTCAAACCTACCACTCAGGAATGTTTGCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp TTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCTCTTTAACCTGCACCTaGATGGGATATGGAATCCCA +
Preference number: 5 (lower is better)
Translates to: FPVSNNLGGVSVFMPSKASLTCT*MGYGIP
Trigger: TGGGATTCCATATCCCATCAAGGTGCAGGTTAAAGA...GGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp CCCCAGCAAACATTCCTGAGTGGTAGGTTTGAGGAGGTGTTCCAATTTATTGTTTCAGCTTCTACACACTaGCACGCGGCTCCTTCACAG +
Preference number: 5 (lower is better)
Translates to: PQQTFLSGRFEEVFQFIVSASTH*HAAPSQ
Trigger: CTGTGAAGGAGCCGCGTGCAAGTGTGTAGAAGCTGA...AACAATAAATTGGAACACCTCCTCAAACCTACCACTCAGGAATGTTTGCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS TCA 90 bp TCTGCACTCCCTTTGGGGAGGTGGGTTAGGATATTGATGCCTTCCTaGCTTAGAACTGCAGACAAGATCTCACCTACAAGCAGTCCTTTT +
Preference number: 5 (lower is better)
Translates to: SALPLGRWVRILMPS*LRTADKISPTSSPF
Trigger: AAAAGGACTGCTTGTAGGTGAGATCTTGTCTGCAGTTCTAAGTCAGGAAGGCATCAATATCCTAACCCACCTCCCCAAAGGGAGTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS GCA 90 bp CATTCCAGTTGCCATATTAAGAGACACAGTTTGGCCTGGAGAATATaGATCTGCATCAGGAGACAGATGAACCTGGAGCTGGTTGCCACA +
Preference number: 5 (lower is better)
Translates to: HSSCHIKRHSLAWRI*ICIRRQMNLELVAT
Trigger: TGTGGCAACCAGCTCCAGGTTCATCTGTCTCCTGATGCAGATGCATATTCTCCAGGCCAAACTGTGTCTCTTAATATGGCAACTGGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS CCA 90 bp CCAGGAATCCATTCCAGTTGCCATATTAAGAGACACAGTTTGGCCTaGAGAATATGCATCTGCATCAGGAGACAGATGAACCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: PGIHSSCHIKRHSLA*RICICIRRQMNLEL
Trigger: CAGCTCCAGGTTCATCTGTCTCCTGATGCAGATGCATATTCTCCAGGCCAAACTGTGTCTCTTAATATGGCAACTGGAATGGATTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp AGGTGTTCCAATTTATTGTTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTGGAACACATTGGCATaGTTGAGGCCACCACCTGCC +
Preference number: 5 (lower is better)
Translates to: RCSNLLFPVSNNLGGVSVWNTLA*LRPPPA
Trigger: GGCAGGTGGTGGCCTCAACAATGCCAATGTGTTCCA...GACAGATACTCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGAACACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp TTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCAAACAGTTCCTTTCAATaGGATCTGTTCTCCTCGTAC +
Preference number: 5 (lower is better)
Translates to: FRCPITLEEYLSSCPPRPNSSFQ*DLFSSY
Trigger: GTACGAGGAGAACAGATCCAATTGAAAGGAACTGTT...TGGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTTATTGGACACCGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS TCA 90 bp GGTAACAGGGTCTTCATGTGTAGCCTTCCCAATTGCATGTCTTTATaGGAGATATTAGCACGGAGCTGGCTTGCGACGACACAACATTCA +
Preference number: 5 (lower is better)
Translates to: GNRVFMCSLPNCMSL*EILARSWLATTQHS
Trigger: TGAATGTTGTGTCGTCGCAAGCCAGCTCCGTGCTAATATCTCTCATAAAGACATGCAATTGGGAAGGCTACACATGAAGACCCTGTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS TCA 90 bp AGAAACATCGATGTCCATACTCAAGCGGAGTTGTTTAACCAGGAGTaGATATTCCGTCAGGCCCTCAATGGCATTGATTGTGTCCTGGGT +
Preference number: 5 (lower is better)
Translates to: RNIDVHTQAELFNQE*IFRQALNGIDCVLG
Trigger: ACCCAGGACACAATCAATGCCATTGAGGGCCTGACGGAATATTCACTCCTGGTTAAACAACTCCGCTTGAGTATGGACATCGATGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS GCA 90 bp TCCCAATTGCATGTCTTTATGAGAGATATTAGCACGGAGCTGGCTTaGGACGACACAACATTCAGTGAAAGCTTTGATGCATCTTGGCCC +
Preference number: 5 (lower is better)
Translates to: SQLHVFMRDISTELA*DDTTFSESFDASWP
Trigger: GGGCCAAGATGCATCAAAGCTTTCACTGAATGTTGTGTCGTCGCAAGCCAGCTCCGTGCTAATATCTCTCATAAAGACATGCAATTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp CTTCAACAACAGGAGTCCATAAGTGCAAACTGTATGCAGCTGAACTTCAGGAATGCTAGGTGGAACACATaGGCATTGTTGAGGCCACCA +
Preference number: 5 (lower is better)
Translates to: LQQQESISANCMQLNFRNARWNT*ALLRPP
Trigger: TGGTGGCCTCAACAATGCCAATGTGTTCCACCTAGC...ATTCCTGAAGTTCAGCTGCATACAGTTTGCACTTATGGACTCCTGTTGTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS GCA 90 bp CTTCCCACAACCAGCTTTCTGGAAAATAACTCCGAATTTCTGGCTTaGTTACTGGTAACAGGGTCTTCATGTGTAGCCTTCCCAATTGCA +
Preference number: 5 (lower is better)
Translates to: LPTTSFLENNSEFLA*LLVTGSSCVAFPIA
Trigger: TGCAATTGGGAAGGCTACACATGAAGACCCTGTTACCAGTAAGCAAGCCAGAAATTCGGAGTTATTTTCCAGAAAGCTGGTTGTGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS CCA 90 bp TGGAGCATCAGTTTTGACATTAAACTCCAGCACCGTCACTCCAGATaGGAGATTAAGCACAAAGGAAGCTACTCCATCATCAACACGTGT +
Preference number: 5 (lower is better)
Translates to: WSISFDIKLQHRHSR*EIKHKGSYSIINTC
Trigger: ACACGTGTTGATGATGGAGTAGCTTCCTTTGTGCTTAATCTCCCATCTGGAGTGACGGTGCTGGAGTTTAATGTCAAAACTGATGCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp CAAACATTCCTGAGTGGTAGGTTTGAGGAGGTGTTCCAATTTATTGTTTCCGGTCTTTCCAAGGGCTTTTaGGCTCCTCTTTGGACTCCA +
Preference number: 5 (lower is better)
Translates to: QTFLSGRFEEVFQFIVSGLSKGF*APLWTP
Trigger: TGGAGTCCAAAGAGGAGCCAAAAAGCCCTTGGAAAG...ACCGGAAACAATAAATTGGAACACCTCCTCAAACCTACCACTCAGGAATGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp AGGTGTTCCAATTTATTGTTTCCGGTGTCCAATAACCTTGGAGGAGTATCTGTCCTCCGAATTTCTGGCTaGCTTACTGGTAACAGGGTC +
Preference number: 5 (lower is better)
Translates to: RCSNLLFPVSNNLGGVSVLRISG*LTGNRV
Trigger: GACCCTGTTACCAGTAAGCAAGCCAGAAATTCGGAG...GACAGATACTCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGAACACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp CCCCAGCAAACATTCCTGAGTGGTAGGTTTGAGGAGGTGTTCCAATTTATTGTTGTAAAGCATAGGCAGTaGTTTCTACCATACGTGCCG +
Preference number: 5 (lower is better)
Translates to: PQQTFLSGRFEEVFQFIVVKHRQ*FLPYVP
Trigger: CGGCACGTATGGTAGAAACAACTGCCTATGCTTTAC...AACAATAAATTGGAACACCTCCTCAAACCTACCACTCAGGAATGTTTGCTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp AACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAAAGACAGTTTCTCTTTaGGCTGGCTTCAAGTCGTCA +
Preference number: 5 (lower is better)
Translates to: NLGGVSVFMPSKAMLFQKKTVSL*AGFKSS
Trigger: TGACGACTTGAAGCCAGCCAAAAGAGAAACTGTCTT...TTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp GTTCCTTGGTATTTTCTTTCAAGCAAAGGCCATGTTTTTGTAATACTCCCTTTCAACACATTGGCATTGTaGAGGCCACCACCTGCCCCA +
Preference number: 5 (lower is better)
Translates to: VPWYFLSSKGHVFVILPFNTLAL*RPPPAP
Trigger: TGGGGCAGGTGGTGGCCTCAACAATGCCAATGTGTT...GAAAGGGAGTATTACAAAAACATGGCCTTTGCTTGAAAGAAAATACCAAGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp CTTCAACAACAGGAGTCCATAAGTGCAAACTGTATGCAGCTGAACTTCAGGAATACAATGAGGTCATCATaGAGAAGCACCTCTACTGGC +
Preference number: 5 (lower is better)
Translates to: LQQQESISANCMQLNFRNTMRSS*RSTSTG
Trigger: GCCAGTAGAGGTGCTTCTCAATGATGACCTCATTGT...ATTCCTGAAGTTCAGCTGCATACAGTTTGCACTTATGGACTCCTGTTGTTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS TCA 90 bp TTAACCAGACTGAATCAGACACTAATTCTGCTGTCTGTTCTCCTGTaGCGATGTAATAGACCAGAAGTCGGGATGAAGGAACCATGTTCT +
Preference number: 5 (lower is better)
Translates to: LTRLNQTLILLSVLL*RCNRPEVGMKEPCS
Trigger: AGAACATGGTTCCTTCATCCCGACTTCTGGTCTATTACATCGTCACAGGAGAACAGACAGCAGAATTAGTGTCTGATTCAGTCTGGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp TATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACAGCATTTGGGAGAGAGGACATATTaGATGCCAGGTATTTCTGCC +
Preference number: 5 (lower is better)
Translates to: YLSSCPPRPCYFRKLQHLGERTY*MPGISA
Trigger: GGCAGAAATACCTGGCATCAAATATGTCCTCTCTCC...CAAATGCTGTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp TGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACCACATATACCAGTGTTaGAAATGCCAACGCCTTGAA +
Preference number: 5 (lower is better)
Translates to: WRSICLHALQGHVISESYHIYQC*KCQRLE
Trigger: TTCAAGGCGTTGGCATTTCAAACACTGGTATATGTG...GTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp AACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAATTGAACACCTTTGCCTaGACAGTATCAGCAACACAT +
Preference number: 5 (lower is better)
Translates to: NLGGVSVFMPSKAMLFQKLNTFA*TVSATH
Trigger: ATGTGTTGCTGATACTGTCAAGGCAAAGGTGTTCAA...TTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS TCA 90 bp AAGCCTTATGGTTATCAGTCCAATCAATATAAAGGTAACTTTGGCTaGGAGATGAGTATGCTATTGCTCGGTAACCTTCCCTGGCCTGAT +
Preference number: 5 (lower is better)
Translates to: KPYGYQSNQYKGNFG*EMSMLLLGNLPWPD
Trigger: ATCAGGCCAGGGAAGGTTACCGAGCAATAGCATACTCATCTCTCAGCCAAAGTTACCTTTATATTGATTGGACTGATAACCATAAGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp GGTTTGAGGAGGTGTTCCAATTTATTGTTTCCGGTGTCCAATAACCTTGGAGGATATATTCTGGCTCGATaGAGACAGAAAAATGTGGCA +
Preference number: 5 (lower is better)
Translates to: GLRRCSNLLFPVSNNLGGYILAR*RQKNVA
Trigger: TGCCACATTTTTCTGTCTCAATCGAGCCAGAATATA...TCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGAACACCTCCTCAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp CTTCAACAACAGGAGTCCATAAGTGCAAACTGTATGCAGCTGAACTTCAGGAATATTAAGAGACACAGTTaGGCCTGGAGAATATGCATC +
Preference number: 5 (lower is better)
Translates to: LQQQESISANCMQLNFRNIKRHS*AWRICI
Trigger: GATGCATATTCTCCAGGCCAAACTGTGTCTCTTAAT...ATTCCTGAAGTTCAGCTGCATACAGTTTGCACTTATGGACTCCTGTTGTTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp TATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACAGCATTTGTCCAGGAAGACATCTTaGAACACCTTTGCCTTGACA +
Preference number: 5 (lower is better)
Translates to: YLSSCPPRPCYFRKLQHLSRKTS*NTFALT
Trigger: TGTCAAGGCAAAGGTGTTCAAAGATGTCTTCCTGGA...CAAATGCTGTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp GGTTTGAGGAGGTGTTCCAATTTATTGTTTCCGGTGTCCAATAACCTTGGAGGACTTTTGATTTCTGTTTaGGGGACCAAATCTAAGGGT +
Preference number: 5 (lower is better)
Translates to: GLRRCSNLLFPVSNNLGGLLISV*GTKSKG
Trigger: ACCCTTAGATTTGGTCCCCAAAACAGAAATCAAAAG...TCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGAACACCTCCTCAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp AACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAATGGTTTACATGCTGTTaGTTTTCTTGTCTCTGCAGA +
Preference number: 5 (lower is better)
Translates to: NLGGVSVFMPSKAMLFQKWFTCC*FSCLCR
Trigger: TCTGCAGAGACAAGAAAACAAACAGCATGTAAACCA...TTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp CCCCAGCAAACATTCCTGAGTGGTAGGTTTGAGGAGGTGTTCCAATTTATTGTTTCCAGAAGGGTTGCCTaGTACTTGACAAAAACATTT +
Preference number: 5 (lower is better)
Translates to: PQQTFLSGRFEEVFQFIVSRRVA*YLTKTF
Trigger: AAATGTTTTTGTCAAGTACAAGGCAACCCTTCTGGA...AACAATAAATTGGAACACCTCCTCAAACCTACCACTCAGGAATGTTTGCTGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp CCCCAGCAAACATTCCTGAGTGGTAGGTTTGAGGAGGTGTTCCAATTTATTGTTAGGTGTTCCAATTTATaGTTTCCGGTGTCCAATAAC +
Preference number: 5 (lower is better)
Translates to: PQQTFLSGRFEEVFQFIVRCSNL*FPVSNN
Trigger: GTTATTGGACACCGGAAACAATAAATTGGAACACCT...AACAATAAATTGGAACACCTCCTCAAACCTACCACTCAGGAATGTTTGCTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS TCA 90 bp ATGGTTATCAGTCCAATCAATATAAAGGTAACTTTGGCTGAGAGATaGGTATGCTATTGCTCGGTAACCTTCCCTGGCCTGATTTTCTTC +
Preference number: 5 (lower is better)
Translates to: MVISPINIKVTLAER*VCYCSVTFPGLIFF
Trigger: GAAGAAAATCAGGCCAGGGAAGGTTACCGAGCAATAGCATACTCATCTCTCAGCCAAAGTTACCTTTATATTGATTGGACTGATAACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS TCA 90 bp TGCTGTCTGTTCTCCTGTGACGATGTAATAGACCAGAAGTCGGGATaGAGGAACCATGTTCTGTGTTACTGGAATGTTTATACTTTGATA +
Preference number: 5 (lower is better)
Translates to: CCLFSCDDVIDQKSG*RNHVLCYWNVYTLI
Trigger: TATCAAAGTATAAACATTCCAGTAACACAGAACATGGTTCCTTCATCCCGACTTCTGGTCTATTACATCGTCACAGGAGAACAGACAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS CCA 90 bp CACAAAGGAAGCTACTCCATCATCAACACGTGTTACACTTTTGCTTaGATCCAAGTCAGATGTCTCTTGGTTTACATCAATTGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: HKGSYSIINTCYTFA*IQVRCLLVYINCLC
Trigger: GCACAAACAATTGATGTAAACCAAGAGACATCTGACTTGGATCCAAGCAAAAGTGTAACACGTGTTGATGATGGAGTAGCTTCCTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp GGTTTGAGGAGGTGTTCCAATTTATTGTTTCCGGTGTCCAATAACCTTGGAGGAATGCGGTTCCAGTTGTaGAAAAGTCCTCTTTATATT +
Preference number: 5 (lower is better)
Translates to: GLRRCSNLLFPVSNNLGGMRFQL*KSPLYI
Trigger: AATATAAAGAGGACTTTTCAACAACTGGAACCGCAT...TCCTCCAAGGTTATTGGACACCGGAAACAATAAATTGGAACACCTCCTCAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp AACCTTGGAGGAGTATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAAATATGCGGTTCCAGTaGTTGAAAAGTCCTCTTTAT +
Preference number: 5 (lower is better)
Translates to: NLGGVSVFMPSKAMLFQKNMRFQ*LKSPLY
Trigger: ATAAAGAGGACTTTTCAACAACTGGAACCGCATATT...TTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATACTCCTCCAAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp TTGGTATTTTCTTTCAAGCAAAGGCCATGTTTTTGTAATACTCCCTTTCAATGGGAGATGAGTATGCTATaGCTCGGTAACCTTCCCTGG +
Preference number: 5 (lower is better)
Translates to: LVFSFKQRPCFCNTPFQWEMSML*LGNLPW
Trigger: CCAGGGAAGGTTACCGAGCAATAGCATACTCATCTC...CCATTGAAAGGGAGTATTACAAAAACATGGCCTTTGCTTGAAAGAAAATACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp TATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACAGCATTTGCATTCAGTGAAAGCTTaGATGCATCTTGGCCCTAAA +
Preference number: 5 (lower is better)
Translates to: YLSSCPPRPCYFRKLQHLHSVKA*MHLGPK
Trigger: TTTAGGGCCAAGATGCATCAAAGCTTTCACTGAATG...CAAATGCTGTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp GTTCCTTGGTATTTTCTTTCAAGCAAAGGCCATGTTTTTGTAATACTCCCTTTCTCTGGAGCATCAGTTTaGACATTAAACTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: VPWYFLSSKGHVFVILPFSGASV*TLNSST
Trigger: GGTGCTGGAGTTTAATGTCAAAACTGATGCTCCAGA...GAAAGGGAGTATTACAAAAACATGGCCTTTGCTTGAAAGAAAATACCAAGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp CTTCAACAACAGGAGTCCATAAGTGCAAACTGTATGCAGCTGAACTTCAGGAATCCAAAGTGGATAATTTaGCCCTTGGATAAAATCAAG +
Preference number: 5 (lower is better)
Translates to: LQQQESISANCMQLNFRNPKWII*PLDKIK
Trigger: CTTGATTTTATCCAAGGGCAAAATTATCCACTTTGG...ATTCCTGAAGTTCAGCTGCATACAGTTTGCACTTATGGACTCCTGTTGTTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp TTGGTATTTTCTTTCAAGCAAAGGCCATGTTTTTGTAATACTCCCTTTCAATGGCTTTTTGGCTCCTCTTaGGACTCCATACACAGCACT +
Preference number: 5 (lower is better)
Translates to: LVFSFKQRPCFCNTPFQWLFGSS*DSIHST
Trigger: AGTGCTGTGTATGGAGTCCAAAGAGGAGCCAAAAAG...CCATTGAAAGGGAGTATTACAAAAACATGGCCTTTGCTTGAAAGAAAATACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp TTGGTATTTTCTTTCAAGCAAAGGCCATGTTTTTGTAATACTCCCTTTCAATGGCGGTGTCCAATAACCTaGGAGGAGTATCTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: LVFSFKQRPCFCNTPFQWRCPIT*EEYLSS
Trigger: TGAAGACAGATACTCCTCCAAGGTTATTGGACACCG...CCATTGAAAGGGAGTATTACAAAAACATGGCCTTTGCTTGAAAGAAAATACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp TATCTGTCTTCATGCCCTCCAAGGCCATGTTATTTCAGAAAGTTACAGCATTTGCTCCAGGCAATTGTTTaGGTTGTATTGTTAAGATTG +
Preference number: 5 (lower is better)
Translates to: YLSSCPPRPCYFRKLQHLLQAIV*VVLLRL
Trigger: CAATCTTAACAATACAACCAAAACAATTGCCTGGAG...CAAATGCTGTAACTTTCTGAAATAACATGGCCTTGGAGGGCATGAAGACAGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS GCA 90 bp GGATGTGATGCTAACTTTATAAGCATATGCAATCTCTGGTTTACATaGTGTTTGTTTTCTTGTCTCTGCAGAGATTGTCAGATCCAATTC +
Preference number: 5 (lower is better)
Translates to: GCDANFISICNLWFT*CLFSCLCRDCQIQF
Trigger: GAATTGGATCTGACAATCTCTGCAGAGACAAGAAAACAAACAGCATGTAAACCAGAGATTGCATATGCTTATAAAGTTAGCATCACATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223642.3
ENST00000480188.1
CDS-3UTR CAA 90 bp GTTCCTTGGTATTTTCTTTCAAGCAAAGGCCATGTTTTTGTAATACTCCCTTTCGGATTAGACGGAATCTaGAAGTCAGGAAAAGAGATA +
Preference number: 5 (lower is better)
Translates to: VPWYFLSSKGHVFVILPFGLDGI*KSGKEI
Trigger: TATCTCTTTTCCTGACTTCAAGATTCCGTCTAATCC...GAAAGGGAGTATTACAAAAACATGGCCTTTGCTTGAAAGAAAATACCAAGGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp TTTCCTGTTCCTTGGTATTTTCTTTCAAGCAAAGGCCATGTTTTTGTAATACTCTCAAAGCTGAAACAATaGAACGAAACTGTGGGTGAG +
Preference number: 5 (lower is better)
Translates to: FPVPWYFLSSKGHVFVILSKLKQ*NETVGE
Trigger: CTCACCCACAGTTTCGTTCAATTGTTTCAGCTTTGA...GAGTATTACAAAAACATGGCCTTTGCTTGAAAGAAAATACCAAGGAACAGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp TTGGTATTTTCTTTCAAGCAAAGGCCATGTTTTTGTAATACTCCCTTTCAATGGATAAGAAACTGGGTTTaGTCCTCCAGGCAATTGTTT +
Preference number: 5 (lower is better)
Translates to: LVFSFKQRPCFCNTPFQWIRNWV*SSRQLF
Trigger: AAACAATTGCCTGGAGGACAAAACCCAGTTTCTTAT...CCATTGAAAGGGAGTATTACAAAAACATGGCCTTTGCTTGAAAGAAAATACCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp TTTCCTGTTCCTTGGTATTTTCTTTCAAGCAAAGGCCATGTTTTTGTAATACTCATGCTGTTTGTTTTCTaGTCTCTGCAGAGATTGTCA +
Preference number: 5 (lower is better)
Translates to: FPVPWYFLSSKGHVFVILMLFVF*SLQRLS
Trigger: TGACAATCTCTGCAGAGACAAGAAAACAAACAGCAT...GAGTATTACAAAAACATGGCCTTTGCTTGAAAGAAAATACCAAGGAACAGGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS TCA 90 bp AAAAAGATATCTTCGGCAAATTCATCTAAATTAGCTAAAAATGCTTaGCACGATGAACATGTTGTGTCTCTAGGCCAGTATTCAATCCAG +
Preference number: 5 (lower is better)
Translates to: KKISSANSSKLAKNA*HDEHVVSLGQYSIQ
Trigger: CTGGATTGAATACTGGCCTAGAGACACAACATGTTCATCGTGTCAAGCATTTTTAGCTAATTTAGATGAATTTGCCGAAGATATCTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp TTTCCTGTTCCTTGGTATTTTCTTTCAAGCAAAGGCCATGTTTTTGTAATACTCAGGGTTGCCTTGTACTaGACAAAAACATTTTCTACA +
Preference number: 5 (lower is better)
Translates to: FPVPWYFLSSKGHVFVILRVALY*TKTFST
Trigger: TGTAGAAAATGTTTTTGTCAAGTACAAGGCAACCCT...GAGTATTACAAAAACATGGCCTTTGCTTGAAAGAAAATACCAAGGAACAGGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS-3UTR CAA 90 bp TTTCCTGTTCCTTGGTATTTTCTTTCAAGCAAAGGCCATGTTTTTGTAATACTCTACCTGAAACTGAAATaGTATTTTATCTGGAGGGCT +
Preference number: 5 (lower is better)
Translates to: FPVPWYFLSSKGHVFVILYLKLK*YFIWRA
Trigger: AGCCCTCCAGATAAAATACAATTTCAGTTTCAGGTA...GAGTATTACAAAAACATGGCCTTTGCTTGAAAGAAAATACCAAGGAACAGGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS CAA 72 bp TTAGTGAGGAAGGTAAGTCCAGCTAGGTGGAACACATaGGCATTGTTGAGGCCACCACCTGCCCCACAGCCC +
Preference number: 6 (lower is better)
Translates to: LVRKVSPARWNT*ALLRPPPAPQP
Trigger: GGGCTGTGGGGCAGGTGGTGGCCTCAACAATGCCAATGTGTTCCACCTAGCTGGACTTACCTTCCTCACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS CAA 90 bp GCATTAGTGAGGAAGGTAAGTCCAGCTAGGTGGAACACATTGGCATaGTTGAGGCCACCACCTGCCCCACAGCCCAGATCACTCTTCTCT +
Preference number: 6 (lower is better)
Translates to: ALVRKVSPARWNTLA*LRPPPAPQPRSLFS
Trigger: AGAGAAGAGTGATCTGGGCTGTGGGGCAGGTGGTGGCCTCAACAATGCCAATGTGTTCCACCTAGCTGGACTTACCTTCCTCACTAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS CAA 90 bp GCATTTGCATTAGTGAGGAAGGTAAGTCCAGCTAGGTGGAACACATaGGCATTGTTGAGGCCACCACCTGCCCCACAGCCCAGATCACTC +
Preference number: 6 (lower is better)
Translates to: AFALVRKVSPARWNT*ALLRPPPAPQPRSL
Trigger: GAGTGATCTGGGCTGTGGGGCAGGTGGTGGCCTCAACAATGCCAATGTGTTCCACCTAGCTGGACTTACCTTCCTCACTAATGCAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS TCA 72 bp CTGATTCCAGTAGGCAAGGAGATGTCCATCACCGCATaGGAGGATCCAGATGATGATTCTTCCCTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: LIPVGKEMSITA*EDPDDDSSLLG
Trigger: GCCCAGCAGGGAAGAATCATCATCTGGATCCTCTCATGCGGTGATGGACATCTCCTTGCCTACTGGAATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS CAA 90 bp TTAGTGAGGAAGGTAAGTCCAGCTAGGTGGAACACATTGGCATTGTaGAGGCCACCACCTGCCCCACAGCCCAGATCACTCTTCTCTAAG +
Preference number: 6 (lower is better)
Translates to: LVRKVSPARWNTLAL*RPPPAPQPRSLFSK
Trigger: CTTAGAGAAGAGTGATCTGGGCTGTGGGGCAGGTGGTGGCCTCAACAATGCCAATGTGTTCCACCTAGCTGGACTTACCTTCCTCACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS CAA 90 bp TTAGCACGGAGCTGGCTTGCGACGACACAACATTCAGTGAAAGCTTaGATGCATCTTGGCCCTAAACTAATCCGTGCAGCTCGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: LARSWLATTQHSVKA*MHLGPKLIRAARCS
Trigger: TGAGCAGCGAGCTGCACGGATTAGTTTAGGGCCAAGATGCATCAAAGCTTTCACTGAATGTTGTGTCGTCGCAAGCCAGCTCCGTGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS TCA 72 bp GCACACATTTGGAGGACTTTGTGCCCTGATGATCAATaGCTGGGCTTTCCGAAGTGCAGATTCCCTCCACAG +
Preference number: 6 (lower is better)
Translates to: AHIWRTLCPDDQ*LGFPKCRFPPQ
Trigger: CTGTGGAGGGAATCTGCACTTCGGAAAGCCCAGTCATTGATCATCAGGGCACAAAGTCCTCCAAATGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS TCA 72 bp CCAATTTCCAGAGGAAGCACAGTGAATGTCACCAAGTaGCTGGAGGAGCCCTCTACTTTCTGGCGCACACAT +
Preference number: 6 (lower is better)
Translates to: PISRGSTVNVTK*LEEPSTFWRTH
Trigger: ATGTGTGCGCCAGAAAGTAGAGGGCTCCTCCAGTCACTTGGTGACATTCACTGTGCTTCCTCTGGAAATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS CCA 72 bp ACATTTGGAGGACTTTGTGCCCTGATGATCAATGACTaGGCTTTCCGAAGTGCAGATTCCCTCCACAGCAGA +
Preference number: 6 (lower is better)
Translates to: TFGGLCALMIND*AFRSADSLHSR
Trigger: TCTGCTGTGGAGGGAATCTGCACTTCGGAAAGCCCAGTCATTGATCATCAGGGCACAAAGTCCTCCAAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS TCA 72 bp CCTTTGGGGAGGTGGGTTAGGATATTGATGCCTTCCTaGCTTAGAACTGCAGACAAGATCTCACCTACAAGC +
Preference number: 6 (lower is better)
Translates to: PLGRWVRILMPS*LRTADKISPTS
Trigger: GCTTGTAGGTGAGATCTTGTCTGCAGTTCTAAGTCAGGAAGGCATCAATATCCTAACCCACCTCCCCAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS GCA 72 bp ATTAAGAGACACAGTTTGGCCTGGAGAATATGCATCTaGATCAGGAGACAGATGAACCTGGAGCTGGTTGCC +
Preference number: 6 (lower is better)
Translates to: IKRHSLAWRICI*IRRQMNLELVA
Trigger: GGCAACCAGCTCCAGGTTCATCTGTCTCCTGATGCAGATGCATATTCTCCAGGCCAAACTGTGTCTCTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS GCA 72 bp ATGCATCTTGGCCCTAAACTAATCCGTGCAGCTCGCTaGTCACAGGTTTCATCATTATTAACGCAGGCTCCA +
Preference number: 6 (lower is better)
Translates to: MHLGPKLIRAAR*SQVSSLLTQAP
Trigger: TGGAGCCTGCGTTAATAATGATGAAACCTGTGAGCAGCGAGCTGCACGGATTAGTTTAGGGCCAAGATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS GCA 72 bp TCTGCAGAGATTGTCAGATCCAATTCTTCCTGCATTTaGCCACAATCAGCTTCTACACACTTGCACGCGGCT +
Preference number: 6 (lower is better)
Translates to: SAEIVRSNSSCI*PQSASTHLHAA
Trigger: AGCCGCGTGCAAGTGTGTAGAAGCTGATTGTGGGCAAATGCAGGAAGAATTGGATCTGACAATCTCTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223642.3
ENST00000480188.1
CDS CCA 72 bp TGTGCATTCAGTGTTACTGGGACTCCTCCTACCAACTaGTCAAGCGAATCTTTAACCTGCACCTTGATGGGA +
Preference number: 6 (lower is better)
Translates to: CAFSVTGTPPTN*SSESLTCTLMG
Trigger: TCCCATCAAGGTGCAGGTTAAAGATTCGCTTGACCAGTTGGTAGGAGGAGTCCCAGTAACACTGAATGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS CAA 72 bp AGCTGGCTTGCGACGACACAACATTCAGTGAAAGCTTaGATGCATCTTGGCCCTAAACTAATCCGTGCAGCT +
Preference number: 6 (lower is better)
Translates to: SWLATTQHSVKA*MHLGPKLIRAA
Trigger: AGCTGCACGGATTAGTTTAGGGCCAAGATGCATCAAAGCTTTCACTGAATGTTGTGTCGTCGCAAGCCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS CAA 90 bp TGCCACCCAGGAATCCATTCCAGTTGCCATATTAAGAGACACAGTTaGGCCTGGAGAATATGCATCTGCATCAGGAGACAGATGAACCTG +
Preference number: 6 (lower is better)
Translates to: CHPGIHSSCHIKRHS*AWRICICIRRQMNL
Trigger: CAGGTTCATCTGTCTCCTGATGCAGATGCATATTCTCCAGGCCAAACTGTGTCTCTTAATATGGCAACTGGAATGGATTCCTGGGTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS TCA 72 bp GTCTTCATGTGTAGCCTTCCCAATTGCATGTCTTTATaGGAGATATTAGCACGGAGCTGGCTTGCGACGACA +
Preference number: 6 (lower is better)
Translates to: VFMCSLPNCMSL*EILARSWLATT
Trigger: TGTCGTCGCAAGCCAGCTCCGTGCTAATATCTCTCATAAAGACATGCAATTGGGAAGGCTACACATGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS GCA 72 bp TGCCATATTAAGAGACACAGTTTGGCCTGGAGAATATaGATCTGCATCAGGAGACAGATGAACCTGGAGCTG +
Preference number: 6 (lower is better)
Translates to: CHIKRHSLAWRI*ICIRRQMNLEL
Trigger: CAGCTCCAGGTTCATCTGTCTCCTGATGCAGATGCATATTCTCCAGGCCAAACTGTGTCTCTTAATATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS TCA 72 bp GATGTCCATACTCAAGCGGAGTTGTTTAACCAGGAGTaGATATTCCGTCAGGCCCTCAATGGCATTGATTGT +
Preference number: 6 (lower is better)
Translates to: DVHTQAELFNQE*IFRQALNGIDC
Trigger: ACAATCAATGCCATTGAGGGCCTGACGGAATATTCACTCCTGGTTAAACAACTCCGCTTGAGTATGGACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS GCA 72 bp CTTGTCTCTGCAGAGATTGTCAGATCCAATTCTTCCTaGATTTGCCCACAATCAGCTTCTACACACTTGCAC +
Preference number: 6 (lower is better)
Translates to: LVSAEIVRSNSS*ICPQSASTHLH
Trigger: GTGCAAGTGTGTAGAAGCTGATTGTGGGCAAATGCAGGAAGAATTGGATCTGACAATCTCTGCAGAGACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223642.3
ENST00000480188.1
CDS CAA 72 bp GGAATCCATTCCAGTTGCCATATTAAGAGACACAGTTaGGCCTGGAGAATATGCATCTGCATCAGGAGACAG +
Preference number: 6 (lower is better)
Translates to: GIHSSCHIKRHS*AWRICICIRRQ
Trigger: CTGTCTCCTGATGCAGATGCATATTCTCCAGGCCAAACTGTGTCTCTTAATATGGCAACTGGAATGGATTCC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS TCA 72 bp AGTCCAATCAATATAAAGGTAACTTTGGCTGAGAGATaGGTATGCTATTGCTCGGTAACCTTCCCTGGCCTG +
Preference number: 6 (lower is better)
Translates to: SPINIKVTLAER*VCYCSVTFPGL
Trigger: CAGGCCAGGGAAGGTTACCGAGCAATAGCATACTCATCTCTCAGCCAAAGTTACCTTTATATTGATTGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS TCA 72 bp CTGAATCAGACACTAATTCTGCTGTCTGTTCTCCTGTaGCGATGTAATAGACCAGAAGTCGGGATGAAGGAA +
Preference number: 6 (lower is better)
Translates to: LNQTLILLSVLL*RCNRPEVGMKE
Trigger: TTCCTTCATCCCGACTTCTGGTCTATTACATCGTCACAGGAGAACAGACAGCAGAATTAGTGTCTGATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS GCA 72 bp ACCAGCTTTCTGGAAAATAACTCCGAATTTCTGGCTTaGTTACTGGTAACAGGGTCTTCATGTGTAGCCTTC +
Preference number: 6 (lower is better)
Translates to: TSFLENNSEFLA*LLVTGSSCVAF
Trigger: GAAGGCTACACATGAAGACCCTGTTACCAGTAAGCAAGCCAGAAATTCGGAGTTATTTTCCAGAAAGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS GCA 72 bp ATATGGCAGTATAGTGATATGCATGACACTTTAAAATaGTGTCAAGTTGGCTGGGCATGGTGGTGTGTGCCT +
Preference number: 6 (lower is better)
Translates to: IWQYSDMHDTLK*CQVGWAWWCVP
Trigger: AGGCACACACCACCATGCCCAGCCAACTTGACAGCATTTTAAAGTGTCATGCATATCACTATACTGCCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466280.1
CDS CCA 72 bp CATTCCAGTTGCCATATTAAGAGACACAGTTTGGCCTaGAGAATATGCATCTGCATCAGGAGACAGATGAAC +
Preference number: 6 (lower is better)
Translates to: HSSCHIKRHSLA*RICICIRRQMN
Trigger: GTTCATCTGTCTCCTGATGCAGATGCATATTCTCCAGGCCAAACTGTGTCTCTTAATATGGCAACTGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS CCA 72 bp TCTGGGAACAAGATGAACTTCCCACAACCAGCTTTCTaGAAAATAACTCCGAATTTCTGGCTTGCTTACTGG +
Preference number: 6 (lower is better)
Translates to: SGNKMNFPQPAF*KITPNFWLAYW
Trigger: CCAGTAAGCAAGCCAGAAATTCGGAGTTATTTTCCAGAAAGCTGGTTGTGGGAAGTTCATCTTGTTCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS CCA 72 bp ATACGCAGAAATGGCCAATGTAAAGGTGCTCTGGGCTaGCAGTGTATTTTCAAGCAGAAAGTTGTCAGCTTT +
Preference number: 6 (lower is better)
Translates to: IRRNGQCKGALG*QCIFKQKVVSF
Trigger: AAAGCTGACAACTTTCTGCTTGAAAATACACTGCCAGCCCAGAGCACCTTTACATTGGCCATTTCTGCGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223642.3
ENST00000489802.1
CDS CAA 90 bp TTTGCTTGGATCCAAGTCAGATGTCTCTTGGTTTACATCAATTGTTaGTGCATTCAGTGTTACTGGGACTCCTCCTACCAACTGGTCAAG +
Preference number: 6 (lower is better)
Translates to: FAWIQVRCLLVYINC*CIQCYWDSSYQLVK
Trigger: CTTGACCAGTTGGTAGGAGGAGTCCCAGTAACACTGAATGCACAAACAATTGATGTAAACCAAGAGACATCTGACTTGGATCCAAGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS TCA 72 bp ACATCACATGGTCCAACAGGTCTTTTTGGTAATAGCTaGCAAACACGACTTCTTCCAATTCCTGCGTCATCA +
Preference number: 6 (lower is better)
Translates to: TSHGPTGLFGNS*QTRLLPIPASS
Trigger: TGATGACGCAGGAATTGGAAGAAGTCGTGTTTGTCAGCTATTACCAAAAAGACCTGTTGGACCATGTGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460578.1
CDS TCA 72 bp GGTTATCAGTCCAATCAATATAAAGGTAACTTTGGCTaGGAGATGAGTATGCTATTGCTCGGTAACCTTCCC +
Preference number: 6 (lower is better)
Translates to: GYQSNQYKGNFG*EMSMLLLGNLP
Trigger: GGGAAGGTTACCGAGCAATAGCATACTCATCTCTCAGCCAAAGTTACCTTTATATTGATTGGACTGATAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS TCA 72 bp TTCTCCTGTGACGATGTAATAGACCAGAAGTCGGGATaGAGGAACCATGTTCTGTGTTACTGGAATGTTTAT +
Preference number: 6 (lower is better)
Translates to: FSCDDVIDQKSG*RNHVLCYWNVY
Trigger: ATAAACATTCCAGTAACACAGAACATGGTTCCTTCATCCCGACTTCTGGTCTATTACATCGTCACAGGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS GCA 72 bp AGGAAGCTACTCCATCATCAACACGTGTTACACTTTTaGTTGGATCCAAGTCAGATGTCTCTTGGTTTACAT +
Preference number: 6 (lower is better)
Translates to: RKLLHHQHVLHF*LDPSQMSLGLH
Trigger: ATGTAAACCAAGAGACATCTGACTTGGATCCAAGCAAAAGTGTAACACGTGTTGATGATGGAGTAGCTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS CAA 72 bp AAGGAAGCTACTCCATCATCAACACGTGTTACACTTTaGCTTGGATCCAAGTCAGATGTCTCTTGGTTTACA +
Preference number: 6 (lower is better)
Translates to: KEATPSSTRVTL*LGSKSDVSWFT
Trigger: TGTAAACCAAGAGACATCTGACTTGGATCCAAGCAAAAGTGTAACACGTGTTGATGATGGAGTAGCTTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS CAA 72 bp AAGGGTCTTGAACATCACATGGTCCAACAGGTCTTTTaGGTAATAGCTGACAAACACGACTTCTTCCAATTC +
Preference number: 6 (lower is better)
Translates to: KGLEHHMVQQVF*VIADKHDFFQF
Trigger: GAATTGGAAGAAGTCGTGTTTGTCAGCTATTACCAAAAAGACCTGTTGGACCATGTGATGTTCAAGACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460578.1
CDS CAA 90 bp GCACAAAGGAAGCTACTCCATCATCAACACGTGTTACACTTTTGCTaGGATCCAAGTCAGATGTCTCTTGGTTTACATCAATTGTTTGTG +
Preference number: 6 (lower is better)
Translates to: AQRKLLHHQHVLHFC*DPSQMSLGLHQLFV
Trigger: CACAAACAATTGATGTAAACCAAGAGACATCTGACTTGGATCCAAGCAAAAGTGTAACACGTGTTGATGATGGAGTAGCTTCCTTTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS CAA 90 bp CCTCGTACAACAGAATATGGTATATTCATTTCCAGGAAGACATCTTaGAACACCTTTGCCTTGACAGTATCAGCAACACATATACCAGTG +
Preference number: 6 (lower is better)
Translates to: PRTTEYGIFISRKTS*NTFALTVSATHIPV
Trigger: CACTGGTATATGTGTTGCTGATACTGTCAAGGCAAAGGTGTTCAAAGATGTCTTCCTGGAAATGAATATACCATATTCTGTTGTACGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223642.3
ENST00000466280.1
CDS TCA 72 bp AGATTTCTTTTCCAAACCAAGTCTCCAGTGAAAAATTaGTGTTGTGAAGGCCAATTTCCAGAGGAAGCACAG +
Preference number: 6 (lower is better)
Translates to: RFLFQTKSPVKN*CCEGQFPEEAQ
Trigger: CTGTGCTTCCTCTGGAAATTGGCCTTCACAACATCAATTTTTCACTGGAGACTTGGTTTGGAAAAGAAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS CCA 72 bp AGCTACTCCATCATCAACACGTGTTACACTTTTGCTTaGATCCAAGTCAGATGTCTCTTGGTTTACATCAAT +
Preference number: 6 (lower is better)
Translates to: SYSIINTCYTFA*IQVRCLLVYIN
Trigger: ATTGATGTAAACCAAGAGACATCTGACTTGGATCCAAGCAAAAGTGTAACACGTGTTGATGATGGAGTAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS CAA 72 bp AAGCTACTCCATCATCAACACGTGTTACACTTTTGCTaGGATCCAAGTCAGATGTCTCTTGGTTTACATCAA +
Preference number: 6 (lower is better)
Translates to: KLLHHQHVLHFC*DPSQMSLGLHQ
Trigger: TTGATGTAAACCAAGAGACATCTGACTTGGATCCAAGCAAAAGTGTAACACGTGTTGATGATGGAGTAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS CAA 90 bp TTAAGCACAAAGGAAGCTACTCCATCATCAACACGTGTTACACTTTaGCTTGGATCCAAGTCAGATGTCTCTTGGTTTACATCAATTGTT +
Preference number: 6 (lower is better)
Translates to: LSTKEATPSSTRVTL*LGSKSDVSWFTSIV
Trigger: AACAATTGATGTAAACCAAGAGACATCTGACTTGGATCCAAGCAAAAGTGTAACACGTGTTGATGATGGAGTAGCTTCCTTTGTGCTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS CAA 90 bp TATGGTATATTCATTTCCAGGAAGACATCTTTGAACACCTTTGCCTaGACAGTATCAGCAACACATATACCAGTGTTTGAAATGCCAACG +
Preference number: 6 (lower is better)
Translates to: YGIFISRKTSLNTFA*TVSATHIPVFEMPT
Trigger: CGTTGGCATTTCAAACACTGGTATATGTGTTGCTGATACTGTCAAGGCAAAGGTGTTCAAAGATGTCTTCCTGGAAATGAATATACCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223642.3
ENST00000466280.1
CDS CAA 90 bp CTTTATAAGCATATGCAATCTCTGGTTTACATGCTGTTTGTTTTCTaGTCTCTGCAGAGATTGTCAGATCCAATTCTTCCTGCATTTGCC +
Preference number: 6 (lower is better)
Translates to: LYKHMQSLVYMLFVF*SLQRLSDPILPAFA
Trigger: GGCAAATGCAGGAAGAATTGGATCTGACAATCTCTGCAGAGACAAGAAAACAAACAGCATGTAAACCAGAGATTGCATATGCTTATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223642.3
ENST00000480188.1
CDS CAA 72 bp GTTCCAGTTGTTGAAAAGTCCTCTTTATATTTAGCCTaGATCGTCCACATACCATATCTAGGATTAGACGGA +
Preference number: 6 (lower is better)
Translates to: VPVVEKSSLYLA*IVHIPYLGLDG
Trigger: TCCGTCTAATCCTAGATATGGTATGTGGACGATCAAGGCTAAATATAAAGAGGACTTTTCAACAACTGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223642.3
ENST00000460578.1
CDS CAA 72 bp TTCATTTCCAGGAAGACATCTTTGAACACCTTTGCCTaGACAGTATCAGCAACACATATACCAGTGTTTGAA +
Preference number: 6 (lower is better)
Translates to: FISRKTSLNTFA*TVSATHIPVFE
Trigger: TTCAAACACTGGTATATGTGTTGCTGATACTGTCAAGGCAAAGGTGTTCAAAGATGTCTTCCTGGAAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223642.3
ENST00000466280.1
CDS CAA 72 bp CCCAGAAGTCCTATAGTTGTAAACAGTTCCTTTCAATaGGATCTGTTCTCCTCGTACAACAGAATATGGTAT +
Preference number: 6 (lower is better)
Translates to: PRSPIVVNSSFQ*DLFSSYNRIWY
Trigger: ATACCATATTCTGTTGTACGAGGAGAACAGATCCAATTGAAAGGAACTGTTTACAACTATAGGACTTCTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223642.3
ENST00000466280.1
CDS CAA 90 bp GAACTGCATCCCAGAAGTCCTATAGTTGTAAACAGTTCCTTTCAATaGGATCTGTTCTCCTCGTACAACAGAATATGGTATATTCATTTC +
Preference number: 6 (lower is better)
Translates to: ELHPRSPIVVNSSFQ*DLFSSYNRIWYIHF
Trigger: GAAATGAATATACCATATTCTGTTGTACGAGGAGAACAGATCCAATTGAAAGGAACTGTTTACAACTATAGGACTTCTGGGATGCAGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3
CDS CAA 90 bp GATGCTAACTTTATAAGCATATGCAATCTCTGGTTTACATGCTGTTaGTTTTCTTGTCTCTGCAGAGATTGTCAGATCCAATTCTTCCTG +
Preference number: 6 (lower is better)
Translates to: DANFISICNLWFTCC*FSCLCRDCQIQFFL
Trigger: CAGGAAGAATTGGATCTGACAATCTCTGCAGAGACAAGAAAACAAACAGCATGTAAACCAGAGATTGCATATGCTTATAAAGTTAGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223642.3
ENST00000480188.1
CDS CAA 90 bp ACTCTGCATCCCAGAAGTCCTATAGTTGTAAACAGTTCCTTTCAATaGGATCTGTTCTCCTCGTACAACAGAATATGGTATATTCATTTC +
Preference number: 6 (lower is better)
Translates to: TLHPRSPIVVNSSFQ*DLFSSYNRIWYIHF
Trigger: GAAATGAATATACCATATTCTGTTGTACGAGGAGAACAGATCCAATTGAAAGGAACTGTTTACAACTATAGGACTTCTGGGATGCAGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466280.1
CDS GCA 72 bp TATATTCATTTCCAGGAAGACATCTTTGAACACCTTTaGCTTGACAGTATCAGCAACACATATACCAGTGTT +
Preference number: 6 (lower is better)
Translates to: YIHFQEDIFEHL*LDSISNTYTSV
Trigger: AACACTGGTATATGTGTTGCTGATACTGTCAAGGCAAAGGTGTTCAAAGATGTCTTCCTGGAAATGAATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223642.3
ENST00000466280.1
CDS CCA 72 bp TTTCAATTGGATCTGTTCTCCTCGTACAACAGAATATaGTATATTCATTTCCAGGAAGACATCTTTGAACAC +
Preference number: 6 (lower is better)
Translates to: FQLDLFSSYNRI*YIHFQEDIFEH
Trigger: GTGTTCAAAGATGTCTTCCTGGAAATGAATATACCATATTCTGTTGTACGAGGAGAACAGATCCAATTGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223642.3
ENST00000466280.1
CDS TCA 72 bp AACGCAGGCTCCATCGTAACAACATTTCTTCACTACTaGATGTTTATATTTAGCAGCTATTTCTTCTATCTT +
Preference number: 6 (lower is better)
Translates to: NAGSIVTTFLHY*MFIFSSYFFYL
Trigger: AAGATAGAAGAAATAGCTGCTAAATATAAACATTCAGTAGTGAAGAAATGTTGTTACGATGGAGCCTGCGTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223642.3