RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C4ORF50 (Homo sapiens)

Ensembl gene IDs: ENSG00000181215

Ensembl transcript IDs: ENST00000324058.9, ENST00000531445.3, ENST00000639345.1

Found 1658 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGCCTGTGGGGCAGCCTGAGACCAGCTCCTGTGTGCCAAGTTCCTaGCTGAACCTACTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGC +
Preference number: 1 (lower is better)
Translates to: LPVGQPETSSCVPSS*LNLLGCQSRSCPWS
Trigger: GCTCCAGGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCAGGCAGGAACTTGGCACACAGGAGCTGGTCTCAGGCTGCCCCACAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 90 bp CCCTGTCAGGCCCCTGGCCGCCAGTGTAAGCGGGCCTCACAGCCCTaGAGTTTACAGGGAAATGGTGTCAGAGGAAGCAGACTCCCTGGG +
Preference number: 1 (lower is better)
Translates to: PCQAPGRQCKRASQP*SLQGNGVRGSRLPG
Trigger: CCCAGGGAGTCTGCTTCCTCTGACACCATTTCCCTGTAAACTGCAGGGCTGTGAGGCCCGCTTACACTGGCGGCCAGGGGCCTGACAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 90 bp CTGTGGGGCAGCCTGAGACCAGCTCCTGTGTGCCAAGTTCCTGCCTaGACCTACTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGCATCT +
Preference number: 1 (lower is better)
Translates to: LWGSLRPAPVCQVPA*TYWVARAGPAPGAS
Trigger: AGATGCTCCAGGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCAGGCAGGAACTTGGCACACAGGAGCTGGTCTCAGGCTGCCCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 90 bp CCTCCTCAGCCCCTTCCCAAAGAGAGAGGTGACATCTCTGGTGGGTaGGCCTGGGTCAGGGTCTGGTGTGTGTCGTCCAAGCCCCCTAGA +
Preference number: 1 (lower is better)
Translates to: PPQPLPKERGDISGG*AWVRVWCVSSKPPR
Trigger: TCTAGGGGGCTTGGACGACACACACCAGACCCTGACCCAGGCTCACCCACCAGAGATGTCACCTCTCTCTTTGGGAAGGGGCTGAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR TCA 90 bp GTGAACCTACTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGCATCTaGTGGGTGGCAAGGAGCCACCATGTGCCCTTCCAAATGCTGGGG +
Preference number: 1 (lower is better)
Translates to: VNLLGCQSRSCPWSI*WVARSHHVPFQMLG
Trigger: CCCCAGCATTTGGAAGGGCACATGGTGGCTCCTTGCCACCCATCAGATGCTCCAGGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324058.9
3UTR TCA 90 bp CCCGACCCACAACTGGTCAGGAATCCAGTGAACATCTCCACGGACTaGTGGTTTCACTGCAGGCAGGCCCCGGAGGATAGCTGCCCCAGG +
Preference number: 1 (lower is better)
Translates to: PDPQLVRNPVNISTD*WFHCRQAPEDSCPR
Trigger: CCTGGGGCAGCTATCCTCCGGGGCCTGCCTGCAGTGAAACCATCAGTCCGTGGAGATGTTCACTGGATTCCTGACCAGTTGTGGGTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR TCA 90 bp CCAGAGGGAGGGTTGAGCCCGACCCACAACTGGTCAGGAATCCAGTaGACATCTCCACGGACTGATGGTTTCACTGCAGGCAGGCCCCGG +
Preference number: 1 (lower is better)
Translates to: PEGGLSPTHNWSGIQ*TSPRTDGFTAGRPR
Trigger: CCGGGGCCTGCCTGCAGTGAAACCATCAGTCCGTGGAGATGTTCACTGGATTCCTGACCAGTTGTGGGTCGGGCTCAACCCTCCCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR TCA 90 bp CTGAACCTACTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGCATCTaGTGGGTGGCAAGGAGCCACCATGTGCCCTTCCAAATGCTGGGG +
Preference number: 1 (lower is better)
Translates to: LNLLGCQSRSCPWSI*WVARSHHVPFQMLG
Trigger: CCCCAGCATTTGGAAGGGCACATGGTGGCTCCTTGCCACCCATCAGATGCTCCAGGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 90 bp GGAGCATCTGATGGGTGGCAAGGAGCCACCATGTGCCCTTCCAAATaGTGGGGTCTACAGACCAGGCGAGGGGAGTCCGCCATCCTGTAC +
Preference number: 1 (lower is better)
Translates to: GASDGWQGATMCPSK*WGLQTRRGESAILY
Trigger: GTACAGGATGGCGGACTCCCCTCGCCTGGTCTGTAGACCCCAGCATTTGGAAGGGCACATGGTGGCTCCTTGCCACCCATCAGATGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR GCA 90 bp TCTGGCTGGTCTCCAGAGGCCTCAGGGTCACTCGTAGTCATTCCCTaGCTGTGGGGCAGCCTGAGACCAGCTCCTGTGTGCCAAGTTCCT +
Preference number: 1 (lower is better)
Translates to: SGWSPEASGSLVVIP*LWGSLRPAPVCQVP
Trigger: AGGAACTTGGCACACAGGAGCTGGTCTCAGGCTGCCCCACAGGCAGGGAATGACTACGAGTGACCCTGAGGCCTCTGGAGACCAGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 90 bp TCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTaGAAGGAAGGGGTGCTGGATGGGAACGATGCAGTGACTGCTTGC +
Preference number: 1 (lower is better)
Translates to: SWVAHLIRGTSLCSR*KEGVLDGNDAVTAC
Trigger: GCAAGCAGTCACTGCATCGTTCCCATCCAGCACCCCTTCCTTCCACCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR GCA 90 bp GTTCCCTCGTACAGCAGCACCCTTCCCACCTCACCCACCGGACACTaGCCAGCCATTCCTTTGTGGCTGACTTCCAGTTGTCCCAAGCCA +
Preference number: 1 (lower is better)
Translates to: VPSYSSTLPTSPTGH*PAIPLWLTSSCPKP
Trigger: TGGCTTGGGACAACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGGAAGGGTGCTGCTGTACGAGGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR GCA 90 bp ACGCTGCAAAGGTCGTCTTGGCTTGCTTTAATGGATTTCCTGGGTTaGCTTTCTGCCCAGGCCCAGCACGTGAGCGCGGCAGAGGGGAGC +
Preference number: 1 (lower is better)
Translates to: TLQRSSWLALMDFLG*LSAQAQHVSAAEGS
Trigger: GCTCCCCTCTGCCGCGCTCACGTGCTGGGCCTGGGCAGAAAGGCAACCCAGGAAATCCATTAAAGCAAGCCAAGACGACCTTTGCAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR CCA 90 bp GCATCTGATGGGTGGCAAGGAGCCACCATGTGCCCTTCCAAATGCTaGGGTCTACAGACCAGGCGAGGGGAGTCCGCCATCCTGTACTGT +
Preference number: 1 (lower is better)
Translates to: ASDGWQGATMCPSKC*GLQTRRGESAILYC
Trigger: ACAGTACAGGATGGCGGACTCCCCTCGCCTGGTCTGTAGACCCCAGCATTTGGAAGGGCACATGGTGGCTCCTTGCCACCCATCAGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR CCA 90 bp TACTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGCATCTGATGGGTaGCAAGGAGCCACCATGTGCCCTTCCAAATGCTGGGGTCTACAG +
Preference number: 1 (lower is better)
Translates to: YWVARAGPAPGASDG*QGATMCPSKCWGLQ
Trigger: CTGTAGACCCCAGCATTTGGAAGGGCACATGGTGGCTCCTTGCCACCCATCAGATGCTCCAGGGGCAGGACCTGCTCTGGCAACCCAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR TCA 90 bp GTTGCTCACCCAGCACCGACCACTGCCCCAGGTTCTGCGGAGATCTaGGACACCCATGGCCAACTCCAACCACCAGATCTGACTTCCAGT +
Preference number: 1 (lower is better)
Translates to: VAHPAPTTAPGSAEI*DTHGQLQPPDLTSS
Trigger: ACTGGAAGTCAGATCTGGTGGTTGGAGTTGGCCATGGGTGTCTCAGATCTCCGCAGAACCTGGGGCAGTGGTCGGTGCTGGGTGAGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 90 bp CCTCCAGGGGCACATCCACAGTTCAGTTTTATGCCTCAGGGCCTTTaGACATGCGTTCCCTCGTACAGCAGCACCCTTCCCACCTCACCC +
Preference number: 1 (lower is better)
Translates to: PPGAHPQFSFMPQGL*TCVPSYSSTLPTSP
Trigger: GGGTGAGGTGGGAAGGGTGCTGCTGTACGAGGGAACGCATGTGCAAAGGCCCTGAGGCATAAAACTGAACTGTGGATGTGCCCCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR GCA 90 bp CGGTGGAAGGAAGGGGTGCTGGATGGGAACGATGCAGTGACTGCTTaGAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAG +
Preference number: 1 (lower is better)
Translates to: RWKEGVLDGNDAVTA*SWLDKSMLCPLPLQ
Trigger: CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCACCCCTTCCTTCCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR GCA 90 bp CTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCTCGGCTaGACCGGGTTTCTGTCCTCTCTCTGTCATGTTCCTGATGCTCAA +
Preference number: 1 (lower is better)
Translates to: LHLAGSARAQLAVLG*TGFLSSLCHVPDAQ
Trigger: TTGAGCATCAGGAACATGACAGAGAGAGGACAGAAACCCGGTGCAGCCGAGGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR CCA 90 bp GTGACAAATTGTTTTCTGCTGCAGAGCCAGGCTGGACCGTCTGGCTaGTCTCCAGAGGCCTCAGGGTCACTCGTAGTCATTCCCTGCCTG +
Preference number: 1 (lower is better)
Translates to: VTNCFLLQSQAGPSG*SPEASGSLVVIPCL
Trigger: CAGGCAGGGAATGACTACGAGTGACCCTGAGGCCTCTGGAGACCAGCCAGACGGTCCAGCCTGGCTCTGCAGCAGAAAACAATTTGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 90 bp CCGTGTGACAAATTGTTTTCTGCTGCAGAGCCAGGCTGGACCGTCTaGCTGGTCTCCAGAGGCCTCAGGGTCACTCGTAGTCATTCCCTG +
Preference number: 1 (lower is better)
Translates to: PCDKLFSAAEPGWTV*LVSRGLRVTRSHSL
Trigger: CAGGGAATGACTACGAGTGACCCTGAGGCCTCTGGAGACCAGCCAGACGGTCCAGCCTGGCTCTGCAGCAGAAAACAATTTGTCACACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 90 bp TTCCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTaGCTTCCAGTTGTCCCAAGCCAAGTAGAACGGACCCTTACCTTC +
Preference number: 1 (lower is better)
Translates to: FPPHPPDTAQPFLCG*LPVVPSQVERTLTF
Trigger: GAAGGTAAGGGTCCGTTCTACTTGGCTTGGGACAACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR TCA 90 bp TCTGTTCTCGGTGGAAGGAAGGGGTGCTGGATGGGAACGATGCAGTaGCTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTC +
Preference number: 1 (lower is better)
Translates to: SVLGGRKGCWMGTMQ*LLAAGLTRACFAHF
Trigger: GAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCACCCCTTCCTTCCACCGAGAACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR TCA 90 bp AAAGGCAGCTCAGAAGAGGCCCTTAATGAGTACTCATGGAGCGACTaGGCAGACTTACGCGGAAGCCCACCCACCAGGGCAGCAATTTGG +
Preference number: 1 (lower is better)
Translates to: KGSSEEALNEYSWSD*ADLRGSPPTRAAIW
Trigger: CCAAATTGCTGCCCTGGTGGGTGGGCTTCCGCGTAAGTCTGCTCAGTCGCTCCATGAGTACTCATTAAGGGCCTCTTCTGAGCTGCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 90 bp TGTGGGCCAAATCTGGCCCAAGGGCTGCCAGTACCCGCTGTGGACTaGAAACTCTCTAAGGTCTGTAATGTGATATGGGGCCTGCCTGTT +
Preference number: 1 (lower is better)
Translates to: CGPNLAQGLPVPAVD*KLSKVCNVIWGLPV
Trigger: AACAGGCAGGCCCCATATCACATTACAGACCTTAGAGAGTTTCCAGTCCACAGCGGGTACTGGCAGCCCTTGGGCCAGATTTGGCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 90 bp CCGAAGCAGCACAGGCTGGCAGGATCACCATGCTGTCTAAAGGTCTaGGGCCCAAGACAGGTATATTCTCTGGTACTGCCAGAGAAGTGG +
Preference number: 1 (lower is better)
Translates to: PKQHRLAGSPCCLKV*GPRQVYSLVLPEKW
Trigger: CCACTTCTCTGGCAGTACCAGAGAATATACCTGTCTTGGGCCCCAGACCTTTAGACAGCATGGTGATCCTGCCAGCCTGTGCTGCTTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 90 bp TGGTCTGCAGAGCGATCAAACCACACTACCTCAGCGTGTCCCCACTaGCGCCACACCTCCGACATACCTATTTTAAGAACAGTGCCTAGC +
Preference number: 1 (lower is better)
Translates to: WSAERSNHTTSACPH*RHTSDIPILRTVPS
Trigger: GCTAGGCACTGTTCTTAAAATAGGTATGTCGGAGGTGTGGCGGCAGTGGGGACACGCTGAGGTAGTGTGGTTTGATCGCTCTGCAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 90 bp CCAGCCTCGCTTATCACTCTGCCAATGACACTCATGCCTCTTCCCTaGCTCACCTGCAAAAGCTGGTTGTGCAAACCCGAACTGTGGAAG +
Preference number: 1 (lower is better)
Translates to: PASLITLPMTLMPLP*LTCKSWLCKPELWK
Trigger: CTTCCACAGTTCGGGTTTGCACAACCAGCTTTTGCAGGTGAGGCAGGGAAGAGGCATGAGTGTCATTGGCAGAGTGATAAGCGAGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 90 bp CTCTTTAACTGCAGAGCAAAAGGAGCTGAAATGAGGCTGCATGCCTaGGCACTTTGGGGTGCTGTGGTCAGTTGGGCGCAACTCATGGAC +
Preference number: 1 (lower is better)
Translates to: LFNCRAKGAEMRLHA*ALWGAVVSWAQLMD
Trigger: GTCCATGAGTTGCGCCCAACTGACCACAGCACCCCAAAGTGCCCAGGCATGCAGCCTCATTTCAGCTCCTTTTGCTCTGCAGTTAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 90 bp GTGGGTGAGGTCCAGATATGCAGGAATCACACAGACAGCAACAGATaGGCCTTCCAGGTAAAGCCAAGGCCCTTGGAAAGGCAGCTCAGA +
Preference number: 1 (lower is better)
Translates to: VGEVQICRNHTDSNR*AFQVKPRPLERQLR
Trigger: TCTGAGCTGCCTTTCCAAGGGCCTTGGCTTTACCTGGAAGGCTCATCTGTTGCTGTCTGTGTGATTCCTGCATATCTGGACCTCACCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 90 bp GCTGCAGGTCACTTCCTGCTTGGAAATTATAGGGAAGCCCTGGGGTaGTTGAACCAACAAAGGGATCACCGCAGTGGTTTCCAATCTGGG +
Preference number: 1 (lower is better)
Translates to: AAGHFLLGNYREALG*LNQQRDHRSGFQSG
Trigger: CCCAGATTGGAAACCACTGCGGTGATCCCTTTGTTGGTTCAACCACCCCAGGGCTTCCCTATAATTTCCAAGCAGGAAGTGACCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR CCA 90 bp ATGCCTGGGCACTTTGGGGTGCTGTGGTCAGTTGGGCGCAACTCATaGACACAAGTTGAGAGAAGAAGAGCTCTTCGCTTACTCTGGAAG +
Preference number: 1 (lower is better)
Translates to: MPGHFGVLWSVGRNS*TQVERRRALRLLWK
Trigger: CTTCCAGAGTAAGCGAAGAGCTCTTCTTCTCTCAACTTGTGTCCATGAGTTGCGCCCAACTGACCACAGCACCCCAAAGTGCCCAGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 90 bp GGAGGGGCAGGACTTGGCCTGCCAACATTCTCAGCCTTGAGTTTATaGATGAGGGCGCATAGGAGACCTTGTAGATTCATGCAACCGCAA +
Preference number: 1 (lower is better)
Translates to: GGAGLGLPTFSALSL*MRAHRRPCRFMQPQ
Trigger: TTGCGGTTGCATGAATCTACAAGGTCTCCTATGCGCCCTCATTCATAAACTCAAGGCTGAGAATGTTGGCAGGCCAAGTCCTGCCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR GCA 90 bp ACCCTTACCTTCATCCCGTTGCTCAGGGCACATGTGACACTTGCGTaGGTGCTGATTTACTCACAGGAGTATCTCTCCCATTGTCCTGTG +
Preference number: 1 (lower is better)
Translates to: TLTFIPLLRAHVTLA*VLIYSQEYLSHCPV
Trigger: CACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACGCACGCAAGTGTCACATGTGCCCTGAGCAACGGGATGAAGGTAAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR GCA 90 bp TGTGTCACCATTTGTATGTCTTGCATTTGTTGCAGCCCATTGGTCTaGAGAGCGATCAAACCACACTACCTCAGCGTGTCCCCACTGCCG +
Preference number: 1 (lower is better)
Translates to: CVTICMSCICCSPLV*RAIKPHYLSVSPLP
Trigger: CGGCAGTGGGGACACGCTGAGGTAGTGTGGTTTGATCGCTCTGCAGACCAATGGGCTGCAACAAATGCAAGACATACAAATGGTGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 90 bp CTGCCAATGACACTCATGCCTCTTCCCTGCCTCACCTGCAAAAGCTaGTTGTGCAAACCCGAACTGTGGAAGAGATCATCTTATTCCCCC +
Preference number: 1 (lower is better)
Translates to: LPMTLMPLPCLTCKS*LCKPELWKRSSYSP
Trigger: GGGGGAATAAGATGATCTCTTCCACAGTTCGGGTTTGCACAACCAGCTTTTGCAGGTGAGGCAGGGAAGAGGCATGAGTGTCATTGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 90 bp CAGGTCACTTCCTGCTTGGAAATTATAGGGAAGCCCTGGGGTGGTTaGACCAACAAAGGGATCACCGCAGTGGTTTCCAATCTGGGGATT +
Preference number: 1 (lower is better)
Translates to: QVTSCLEIIGKPWGG*TNKGITAVVSNLGI
Trigger: AATCCCCAGATTGGAAACCACTGCGGTGATCCCTTTGTTGGTTCAACCACCCCAGGGCTTCCCTATAATTTCCAAGCAGGAAGTGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR TCA 90 bp TGTCCTCGGCTGCACCGGGTTTCTGTCCTCTCTCTGTCATGTTCCTaGTGCTCAAAGCTAATGACATTGTCCCAAAATACAGAGGGAGGC +
Preference number: 1 (lower is better)
Translates to: CPRLHRVSVLSLSCS*CSKLMTLSQNTEGG
Trigger: GCCTCCCTCTGTATTTTGGGACAATGTCATTAGCTTTGAGCATCAGGAACATGACAGAGAGAGGACAGAAACCCGGTGCAGCCGAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR TCA 90 bp CAAATGGAGCGATCATTACAAATCCTGAAAACCCAGAGGGAGGGTTaGGCCCGACCCACAACTGGTCAGGAATCCAGTGAACATCTCCAC +
Preference number: 1 (lower is better)
Translates to: QMERSLQILKTQREG*ARPTTGQESSEHLH
Trigger: GTGGAGATGTTCACTGGATTCCTGACCAGTTGTGGGTCGGGCTCAACCCTCCCTCTGGGTTTTCAGGATTTGTAATGATCGCTCCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR GCA 90 bp CTGTCAAGGACAGTGATATTTTCCCCACTAAACAATGGAAGAGTTTaGAGATCAGAGAGATGGGCTCACCTGCCCAGTGCCCTCAGTGGC +
Preference number: 1 (lower is better)
Translates to: LSRTVIFSPLNNGRV*RSERWAHLPSALSG
Trigger: GCCACTGAGGGCACTGGGCAGGTGAGCCCATCTCTCTGATCTGCAAACTCTTCCATTGTTTAGTGGGGAAAATATCACTGTCCTTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 90 bp GTCTGGGGCCCAAGACAGGTATATTCTCTGGTACTGCCAGAGAAGTaGGTGAGGTCCAGATATGCAGGAATCACACAGACAGCAACAGAT +
Preference number: 1 (lower is better)
Translates to: VWGPRQVYSLVLPEK*VRSRYAGITQTATD
Trigger: ATCTGTTGCTGTCTGTGTGATTCCTGCATATCTGGACCTCACCCACTTCTCTGGCAGTACCAGAGAATATACCTGTCTTGGGCCCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 90 bp GCCGAGGTGTGTATCTTATTATCTCCATTTGCCCAGCAAGTAAACTaGGGAGGGGAGGCCACTTTCCCTAGTCTCGGAGCCAATAACTTG +
Preference number: 1 (lower is better)
Translates to: AEVCILLSPFAQQVN*GGEATFPSLGANNL
Trigger: CAAGTTATTGGCTCCGAGACTAGGGAAAGTGGCCTCCCCTCCCCAGTTTACTTGCTGGGCAAATGGAGATAATAAGATACACACCTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 90 bp CCATGTGTGTCACCATTTGTATGTCTTGCATTTGTTGCAGCCCATTaGTCTGCAGAGCGATCAAACCACACTACCTCAGCGTGTCCCCAC +
Preference number: 1 (lower is better)
Translates to: PCVSPFVCLAFVAAH*SAERSNHTTSACPH
Trigger: GTGGGGACACGCTGAGGTAGTGTGGTTTGATCGCTCTGCAGACCAATGGGCTGCAACAAATGCAAGACATACAAATGGTGACACACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 90 bp TTTATTAGGGAATCGTTGGGTTACGCTGCAAAGGTCGTCTTGGCTTaGTTTAATGGATTTCCTGGGTTGCCTTTCTGCCCAGGCCCAGCA +
Preference number: 1 (lower is better)
Translates to: FIRESLGYAAKVVLA*FNGFPGLPFCPGPA
Trigger: TGCTGGGCCTGGGCAGAAAGGCAACCCAGGAAATCCATTAAAGCAAGCCAAGACGACCTTTGCAGCGTAACCCAACGATTCCCTAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR GCA 90 bp GGACAAGCAGGTAGCAGAGCTGGAAGTAGAATCAAGGCTTTGCAATaGCCAGTTGCAGGCCCTTCCTGCATTTCAGCAGTTGTATCACTT +
Preference number: 1 (lower is better)
Translates to: GQAGSRAGSRIKALQ*PVAGPSCISAVVSL
Trigger: AAGTGATACAACTGCTGAAATGCAGGAAGGGCCTGCAACTGGGCATTGCAAAGCCTTGATTCTACTTCCAGCTCTGCTACCTGCTTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 90 bp ATTCTGAATCAGCAGAGCCTGCCCCATGGCACGGTTGGAGAATACTaGATAATGACATCCGAACCACGTTCAGTCCCATTTGCAGTCAAG +
Preference number: 1 (lower is better)
Translates to: ILNQQSLPHGTVGEY*IMTSEPRSVPFAVK
Trigger: CTTGACTGCAAATGGGACTGAACGTGGTTCGGATGTCATTATGCAGTATTCTCCAACCGTGCCATGGGGCAGGCTCTGCTGATTCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 90 bp ATGACACTCATGCCTCTTCCCTGCCTCACCTGCAAAAGCTGGTTGTaGAAACCCGAACTGTGGAAGAGATCATCTTATTCCCCCAACTCA +
Preference number: 1 (lower is better)
Translates to: MTLMPLPCLTCKSWL*KPELWKRSSYSPNS
Trigger: TGAGTTGGGGGAATAAGATGATCTCTTCCACAGTTCGGGTTTGCACAACCAGCTTTTGCAGGTGAGGCAGGGAAGAGGCATGAGTGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 90 bp GGCAATTCATGGCCCGGGAGAATAAGTGGCTCTGCCTTGGAAACATaGTTTATTAGGGAATCGTTGGGTTACGCTGCAAAGGTCGTCTTG +
Preference number: 1 (lower is better)
Translates to: GNSWPGRISGSALET*FIRESLGYAAKVVL
Trigger: CAAGACGACCTTTGCAGCGTAACCCAACGATTCCCTAATAAATCATGTTTCCAAGGCAGAGCCACTTATTCTCCCGGGCCATGAATTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR GCA 90 bp GCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTaGCTGGCATCCAGTGGATATCAACAGACGTTTTTGGAGTGGATG +
Preference number: 1 (lower is better)
Translates to: APGSTLTCLFSFMPH*LASSGYQQTFLEWM
Trigger: CATCCACTCCAAAAACGTCTGTTGATATCCACTGGATGCCAGGCAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR CCA 90 bp CATGATTTATTAGGGAATCGTTGGGTTACGCTGCAAAGGTCGTCTTaGCTTGCTTTAATGGATTTCCTGGGTTGCCTTTCTGCCCAGGCC +
Preference number: 1 (lower is better)
Translates to: HDLLGNRWVTLQRSS*LALMDFLGCLSAQA
Trigger: GGCCTGGGCAGAAAGGCAACCCAGGAAATCCATTAAAGCAAGCCAAGACGACCTTTGCAGCGTAACCCAACGATTCCCTAATAAATCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR TCA 90 bp CTCATCACCCATCTTGGATGGAAGCTACGCAGAATGGTAAATCAATaGGTCCTTATGGCAGAGTGCACTCCGAGACAACCGTCAGTGAAA +
Preference number: 1 (lower is better)
Translates to: LITHLGWKLRRMVNQ*VLMAECTPRQPSVK
Trigger: TTTCACTGACGGTTGTCTCGGAGTGCACTCTGCCATAAGGACTCATTGATTTACCATTCTGCGTAGCTTCCATCCAAGATGGGTGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 90 bp TCCTGGGTTGTGTACTGCAGGAAGAGGATTTGGAACCCTTGGACGTaGCCTTACTTGTTAAGAAGTAGCATTTGTGAAGCATCTGCTGGG +
Preference number: 1 (lower is better)
Translates to: SWVVYCRKRIWNPWT*PYLLRSSICEASAG
Trigger: CCCAGCAGATGCTTCACAAATGCTACTTCTTAACAAGTAAGGTCACGTCCAAGGGTTCCAAATCCTCTTCCTGCAGTACACAACCCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 90 bp CCTGGAGAGAGGCTTGGGCATCAGTGTTTTAAAAAGCTCTGCAGGTaGGTCCAACATGCAACCAGGGTGAAGAATCATCAGTACAGAATG +
Preference number: 1 (lower is better)
Translates to: PGERLGHQCFKKLCR*VQHATRVKNHQYRM
Trigger: CATTCTGTACTGATGATTCTTCACCCTGGTTGCATGTTGGACTCACCTGCAGAGCTTTTTAAAACACTGATGCCCAAGCCTCTCTCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 90 bp CTGTATGTCACCATGTGTGTCACCATTTGTATGTCTTGCATTTGTTaGAGCCCATTGGTCTGCAGAGCGATCAAACCACACTACCTCAGC +
Preference number: 1 (lower is better)
Translates to: LYVTMCVTICMSCIC*SPLVCRAIKPHYLS
Trigger: GCTGAGGTAGTGTGGTTTGATCGCTCTGCAGACCAATGGGCTGCAACAAATGCAAGACATACAAATGGTGACACACATGGTGACATACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 90 bp TGGAGAATACTGCATAATGACATCCGAACCACGTTCAGTCCCATTTaGAGTCAAGTGGCTTTGTCACTGGACCGCAGATGTCAGTTAACC +
Preference number: 1 (lower is better)
Translates to: WRILHNDIRTTFSPI*SQVALSLDRRCQLT
Trigger: GGTTAACTGACATCTGCGGTCCAGTGACAAAGCCACTTGACTGCAAATGGGACTGAACGTGGTTCGGATGTCATTATGCAGTATTCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 90 bp TCTGGATTTCCGGACAGAGTCCTTTCTGCCGAGACTAGGGGTGCTTaGCTACTAGGGTGCTTGTCTACCAATCTTATTTGCAAATCTGAT +
Preference number: 1 (lower is better)
Translates to: SGFPDRVLSAETRGA*LLGCLSTNLICKSD
Trigger: ATCAGATTTGCAAATAAGATTGGTAGACAAGCACCCTAGTAGCCAAGCACCCCTAGTCTCGGCAGAAAGGACTCTGTCCGGAAATCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 90 bp GACAGAGTCCTTTCTGCCGAGACTAGGGGTGCTTGGCTACTAGGGTaGTTGTCTACCAATCTTATTTGCAAATCTGATGAAATCCATGCT +
Preference number: 1 (lower is better)
Translates to: DRVLSAETRGAWLLG*LSTNLICKSDEIHA
Trigger: AGCATGGATTTCATCAGATTTGCAAATAAGATTGGTAGACAAGCACCCTAGTAGCCAAGCACCCCTAGTCTCGGCAGAAAGGACTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 90 bp CCTGACATGGCCTGTGCTTTTAGTAACACCCCTTCCCATCCCAATTaGATTCAATGGTCAATGCACAACATCTCCTCTGTCTTCACAATA +
Preference number: 1 (lower is better)
Translates to: PDMACAFSNTPSHPN*IQWSMHNISSVFTI
Trigger: TATTGTGAAGACAGAGGAGATGTTGTGCATTGACCATTGAATGCAATTGGGATGGGAAGGGGTGTTACTAAAAGCACAGGCCATGTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 90 bp GCCTGTGCTTTTAGTAACACCCCTTCCCATCCCAATTGCATTCAATaGTCAATGCACAACATCTCCTCTGTCTTCACAATACTTCACGAG +
Preference number: 1 (lower is better)
Translates to: ACAFSNTPSHPNCIQ*SMHNISSVFTILHE
Trigger: CTCGTGAAGTATTGTGAAGACAGAGGAGATGTTGTGCATTGACCATTGAATGCAATTGGGATGGGAAGGGGTGTTACTAAAAGCACAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 90 bp CACACCTCCGACATACCTATTTTAAGAACAGTGCCTAGCAGTTCATaGGGAAACGTTGCTATGCCAACTAGCTGGCTGTTGCTAATCATA +
Preference number: 1 (lower is better)
Translates to: HTSDIPILRTVPSSS*GNVAMPTSWLLLII
Trigger: TATGATTAGCAACAGCCAGCTAGTTGGCATAGCAACGTTTCCCCATGAACTGCTAGGCACTGTTCTTAAAATAGGTATGTCGGAGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 90 bp TCTCATTCCAAAGCAATTCAAAAACCTTTGACCAGCTTTGGTGCTTaGTTTCACACCGAGAAACTAGGTAAGGAAGGCTACGGAAGGGTG +
Preference number: 1 (lower is better)
Translates to: SHSKAIQKPLTSFGA*FHTEKLGKEGYGRV
Trigger: CACCCTTCCGTAGCCTTCCTTACCTAGTTTCTCGGTGTGAAATCAAGCACCAAAGCTGGTCAAAGGTTTTTGAATTGCTTTGGAATGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 90 bp ATTGACTTGTCTCTTCTCCTTCATGCCACATTGCCTGGCATCCAGTaGATATCAACAGACGTTTTTGGAGTGGATGGACTGATTAGAAAG +
Preference number: 1 (lower is better)
Translates to: IDLSLLLHATLPGIQ*ISTDVFGVDGLIRK
Trigger: CTTTCTAATCAGTCCATCCACTCCAAAAACGTCTGTTGATATCCACTGGATGCCAGGCAATGTGGCATGAAGGAGAAGAGACAAGTCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR CCA 90 bp ACAGTGCCTAGCAGTTCATGGGGAAACGTTGCTATGCCAACTAGCTaGCTGTTGCTAATCATAATCTATGAATGTGCAGTACAACCATCT +
Preference number: 1 (lower is better)
Translates to: TVPSSSWGNVAMPTS*LLLIIIYECAVQPS
Trigger: AGATGGTTGTACTGCACATTCATAGATTATGATTAGCAACAGCCAGCTAGTTGGCATAGCAACGTTTCCCCATGAACTGCTAGGCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 90 bp CTGAGTTCTCAGAAGGTTTCACGTTTCAGACCTAGAATTTCACCCTaGAACCAAAGGGGAACTGTGAATCTCTTAAAAGAAGCTCACCAG +
Preference number: 1 (lower is better)
Translates to: LSSQKVSRFRPRISP*NQRGTVNLLKEAHQ
Trigger: CTGGTGAGCTTCTTTTAAGAGATTCACAGTTCCCCTTTGGTTCCAGGGTGAAATTCTAGGTCTGAAACGTGAAACCTTCTGAGAACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 90 bp AAGCGTGCTATTTCTTTAATCTTCACACCTTACCCACTGTTTCCATaGAGGACTTTGAGGTTAAGAGAGGTAGGTACCCTGTCCAAGCTT +
Preference number: 1 (lower is better)
Translates to: KRAISLIFTPYPLFP*RTLRLREVGTLSKL
Trigger: AAGCTTGGACAGGGTACCTACCTCTCTTAACCTCAAAGTCCTCCATGGAAACAGTGGGTAAGGTGTGAAGATTAAAGAAATAGCACGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 90 bp CAAAGCCGAAGGCAAAACCACTTGCCACTAAATGAGGGCTCTGATTaGTACCAATTTCTTAAAGCACTCTCTGAAGGTTCTGCTTCAAAT +
Preference number: 1 (lower is better)
Translates to: QSRRQNHLPLNEGSD*YQFLKALSEGSASN
Trigger: ATTTGAAGCAGAACCTTCAGAGAGTGCTTTAAGAAATTGGTAGCAATCAGAGCCCTCATTTAGTGGCAAGTGGTTTTGCCTTCGGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR GCA 90 bp ACTCACAGTAGCCAAAAAGGTGGAAGCCACCCTAAGGTCCCTCAATaGGTGAATGATAAACAAAATGTGGTACATCCACACATTGGAATA +
Preference number: 1 (lower is better)
Translates to: THSSQKGGSHPKVPQ*VNDKQNVVHPHIGI
Trigger: TATTCCAATGTGTGGATGTACCACATTTTGTTTATCATTCACGCATTGAGGGACCTTAGGGTGGCTTCCACCTTTTTGGCTACTGTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 90 bp CAAAATGCCTTCCCATCCAGTTTTTCCATTATTGCGCACAGTAGGTaGCGAGGTGTGTATCTTATTATCTCCATTTGCCCAGCAAGTAAA +
Preference number: 1 (lower is better)
Translates to: QNAFPSSFSIIAHSR*RGVYLIISICPASK
Trigger: TTTACTTGCTGGGCAAATGGAGATAATAAGATACACACCTCGGCACCTACTGTGCGCAATAATGGAAAAACTGGATGGGAAGGCATTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 90 bp TACCTAAGTCGAAGGAACTGCATTTTACAAACACAACAAGGATCCTaGCACTTGGAAAGAATCTTACAGTGTTCAGGTGCTTTTCCAGCC +
Preference number: 1 (lower is better)
Translates to: YLSRRNCILQTQQGS*HLERILQCSGAFPA
Trigger: GGCTGGAAAAGCACCTGAACACTGTAAGATTCTTTCCAAGTGTCAGGATCCTTGTTGTGTTTGTAAAATGCAGTTCCTTCGACTTAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 90 bp AGGAGACCTTGTAGATTCATGCAACCGCAAGGTGTACAGTTATTGTaGATTTGGGATTCAGCGGGAAAGTACACAATTTCTAAACTGATG +
Preference number: 1 (lower is better)
Translates to: RRPCRFMQPQGVQLL*IWDSAGKYTISKLM
Trigger: CATCAGTTTAGAAATTGTGTACTTTCCCGCTGAATCCCAAATGCACAATAACTGTACACCTTGCGGTTGCATGAATCTACAAGGTCTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR CCA 90 bp CCTTGTAGATTCATGCAACCGCAAGGTGTACAGTTATTGTGCATTTaGGATTCAGCGGGAAAGTACACAATTTCTAAACTGATGTCTGTG +
Preference number: 1 (lower is better)
Translates to: PCRFMQPQGVQLLCI*DSAGKYTISKLMSV
Trigger: CACAGACATCAGTTTAGAAATTGTGTACTTTCCCGCTGAATCCCAAATGCACAATAACTGTACACCTTGCGGTTGCATGAATCTACAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR CCA 90 bp GTCGAAGGAACTGCATTTTACAAACACAACAAGGATCCTGACACTTaGAAAGAATCTTACAGTGTTCAGGTGCTTTTCCAGCCATTAGCT +
Preference number: 1 (lower is better)
Translates to: VEGTAFYKHNKDPDT*KESYSVQVLFQPLA
Trigger: AGCTAATGGCTGGAAAAGCACCTGAACACTGTAAGATTCTTTCCAAGTGTCAGGATCCTTGTTGTGTTTGTAAAATGCAGTTCCTTCGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 90 bp ACAGTAGCCAAAAAGGTGGAAGCCACCCTAAGGTCCCTCAATGCGTaGATGATAAACAAAATGTGGTACATCCACACATTGGAATATTAT +
Preference number: 1 (lower is better)
Translates to: TVAKKVEATLRSLNA*MINKMWYIHTLEYY
Trigger: ATAATATTCCAATGTGTGGATGTACCACATTTTGTTTATCATTCACGCATTGAGGGACCTTAGGGTGGCTTCCACCTTTTTGGCTACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 90 bp GACCAATCATTCAATAGGTTTTGGTACAGTAAATATTTCCTATGCTaGCTTGACATTGCCAAAGCCAAACTCCTCAGAATTTGCCAGGCA +
Preference number: 1 (lower is better)
Translates to: DQSFNRFWYSKYFLC*LDIAKAKLLRICQA
Trigger: TGCCTGGCAAATTCTGAGGAGTTTGGCTTTGGCAATGTCAAGGCAGCATAGGAAATATTTACTGTACCAAAACCTATTGAATGATTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR CCA 90 bp TGTCTAAAATATGTCAGAAATGTCTCGCACCCTATTCTCAGAAGTTaGCTGAGTTCTCAGAAGGTTTCACGTTTCAGACCTAGAATTTCA +
Preference number: 1 (lower is better)
Translates to: CLKYVRNVSHPILRS*LSSQKVSRFRPRIS
Trigger: TGAAATTCTAGGTCTGAAACGTGAAACCTTCTGAGAACTCAGCCAACTTCTGAGAATAGGGTGCGAGACATTTCTGACATATTTTAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 90 bp CAAGAGATTCATTTAGTGTGTCATTTACCACCCAATTATATTATCTaGACTTTCATGGAATTGTGCAGTGACCAGTCACCAAGAGCTCAG +
Preference number: 1 (lower is better)
Translates to: QEIHLVCHLPPNYII*TFMELCSDQSPRAQ
Trigger: CTGAGCTCTTGGTGACTGGTCACTGCACAATTCCATGAAAGTTCAGATAATATAATTGGGTGGTAAATGACACACTAAATGAATCTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 90 bp TTCACATGGGAAAGAGAAAACCCAATCCTTCAATCCCAAGTCTACTaGGTTCTTGAAAGCAGTTTTAGGTCCAACGTACAAATTATCTGT +
Preference number: 1 (lower is better)
Translates to: FTWERENPILQSQVY*VLESSFRSNVQIIC
Trigger: ACAGATAATTTGTACGTTGGACCTAAAACTGCTTTCAAGAACTCAGTAGACTTGGGATTGAAGGATTGGGTTTTCTCTTTCCCATGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR GCA 90 bp GAGTCCGCCATCCTGTACTGTGCCCCAGGGAGCCACGGCACAAAGCTTGAGCCGGTGGTGGCACCACGCTaGATCTCGCTGGCTCAGCAA +
Preference number: 2 (lower is better)
Translates to: ESAILYCAPGSHGTKLEPVVAPR*ISLAQQ
Trigger: TTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC...CGGCTCAAGCTTTGTGCCGTGGCTCCCTGGGGCACAGTACAGGATGGCGGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR GCA 90 bp TTCCTGCCTGAACCTACTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGCATCTGCGCCATCCTGTACTGTaGCCCAGGGAGCCACGGCAC +
Preference number: 2 (lower is better)
Translates to: FLPEPTGLPEQVLPLEHLRHPVL*PREPRH
Trigger: GTGCCGTGGCTCCCTGGGGCACAGTACAGGATGGCG...CAGATGCTCCAGGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCAGGCAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 90 bp AGTCCGCCATCCTGTACTGTGCCCCAGGGAGCCACGGCACAAAGCTaGAGCCGACCCAAAGTGCTAGACCCAGACGGCAATTCATGGCCC +
Preference number: 2 (lower is better)
Translates to: SPPSCTVPQGATAQS*SRPKVLDPDGNSWP
Trigger: GGGCCATGAATTGCCGTCTGGGTCTAGCACTTTGGGTCGGCTCAAGCTTTGTGCCGTGGCTCCCTGGGGCACAGTACAGGATGGCGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR GCA 90 bp GTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTCACCCACCGGACACTaGCCAGCCATTCCTTTGTGG +
Preference number: 2 (lower is better)
Translates to: VLFSWVAHLIRGTSLCSRSPTGH*PAIPLW
Trigger: CCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGA...CCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR GCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCGATGCAGTGACTGCTTaGAGCTGGCTTGACAAGAGC +
Preference number: 2 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSDAVTA*SWLDKS
Trigger: GCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATC...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR GCA 90 bp TTGTTGCAGCCCATTGGTCTGCAGAGCGATCAAACCACACTACCTCAGCGTGTCGCCCCGGAGGATAGCTaGCCCAGGACCCGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: LLQPIGLQSDQTTLPQRVAPEDS*PRTRGR
Trigger: CCTGCCTCGGGTCCTGGGGCAGCTATCCTCCGGGGC...GACACGCTGAGGTAGTGTGGTTTGATCGCTCTGCAGACCAATGGGCTGCAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCCCTAGACTCTCTTTTTaGGGGGCTGCCCTCAGGATA +
Preference number: 2 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSPRLSF*GAALRI
Trigger: TATCCTGAGGGCAGCCCCCCAAAAAGAGAGTCTAGG...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CCA 90 bp CAGAGGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTGCCTGGGTCAGGGTCTaGTGTGTGTCGTCCAAGCCC +
Preference number: 2 (lower is better)
Translates to: QREAEGGSPNQCCRSLPAAWVRV*CVSSKP
Trigger: GGGCTTGGACGACACACACCAGACCCTGACCCAGGC...AGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR CAA 90 bp CGACTGAGCAGACTTACGCGGAAGCCCACCCACCAGGGCAGCAATTaGGCCTACTCTGTTCTCTCCCAGAACCCCAGGGCCTACTGTGGT +
Preference number: 2 (lower is better)
Translates to: RLSRLTRKPTHQGSN*AYSVLSQNPRAYCG
Trigger: ACCACAGTAGGCCCTGGGGTTCTGGGAGAGAACAGAGTAGGCCAAATTGCTGCCCTGGTGGGTGGGCTTCCGCGTAAGTCTGCTCAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR TCA 90 bp CCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCCCATTCCTTTGTGGCTaGCTTCCAGTTGTCCCAAGC +
Preference number: 2 (lower is better)
Translates to: PGDQMWWHHAASRWLSKGPFLCG*LPVVPS
Trigger: GCTTGGGACAACTGGAAGTCAGCCACAAAGGAATGG...GCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR TCA 90 bp TGTGACAAATTGTTTTCTGCTGCAGAGCCAGGCTGGACCGTCTGGCTGGTCTCCCCTGGGTCGCCCACCTaGTTCGGGGCACGAGTCTCT +
Preference number: 2 (lower is better)
Translates to: CDKLFSAAEPGWTVWLVSPGSPT*FGARVS
Trigger: AGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGG...GGAGACCAGCCAGACGGTCCAGCCTGGCTCTGCAGCAGAAAACAATTTGTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR TCA 90 bp CAGGAATCCAGTGAACATCTCCACGGACTGATGGTTTCACTGCAGGCAGGCCCCGACATCTCTGGTGGGTaGGCCTGGGTCAGGGTCTGG +
Preference number: 2 (lower is better)
Translates to: QESSEHLHGLMVSLQAGPDISGG*AWVRVW
Trigger: CCAGACCCTGACCCAGGCTCACCCACCAGAGATGTC...GGGGCCTGCCTGCAGTGAAACCATCAGTCCGTGGAGATGTTCACTGGATTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR GCA 90 bp CTGGAGCATCTGATGGGTGGCAAGGAGCCACCATGTGCCCTTCCAAATGCTGGGGTGGTGGCACCACGCTaGATCTCGCTGGCTCAGCAA +
Preference number: 2 (lower is better)
Translates to: LEHLMGGKEPPCALPNAGVVAPR*ISLAQQ
Trigger: TTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC...CCCAGCATTTGGAAGGGCACATGGTGGCTCCTTGCCACCCATCAGATGCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR CCA 90 bp CCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCAGTCTCTGTTCTCGGTaGAAGGAAGGGGTGCTGGAT +
Preference number: 2 (lower is better)
Translates to: PGDQMWWHHAASRWLSKGSLCSR*KEGVLD
Trigger: ATCCAGCACCCCTTCCTTCCACCGAGAACAGAGACT...GCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CCA 90 bp TTCCTGCCTGAACCTACTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGCATCTGGAAGTGCTCTTCTCCTaGGTCGCCCACCTGATTCGG +
Preference number: 2 (lower is better)
Translates to: FLPEPTGLPEQVLPLEHLEVLFS*VAHLIR
Trigger: CCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTC...CAGATGCTCCAGGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCAGGCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 90 bp AGCACCCTTCCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTaGTGGCTGACTTCCAGTTGTCCCAAGCCAAGTAGAACGGACCCT +
Preference number: 2 (lower is better)
Translates to: STLPTSPTGHCPAIP*WLTSSCPKPSRTDP
Trigger: AGGGTCCGTTCTACTTGGCTTGGGACAACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGGAAGGGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR CAA 90 bp TTGTGCACGGCGACCCAGCGTAGGAGCAGCAGAGCCGACAGGTCCTaGGGACTCCAGACCCGGCTTCCTGTCACTCACATGGCATTAAAT +
Preference number: 2 (lower is better)
Translates to: LCTATQRRSSRADRS*GLQTRLPVTHMALN
Trigger: ATTTAATGCCATGTGAGTGACAGGAAGCCGGGTCTGGAGTCCCAAGGACCTGTCGGCTCTGCTGCTCCTACGCTGGGTCGCCGTGCACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 90 bp AGGCTTTGCAATGCCCAGTTGCAGGCCCTTCCTGCATTTCAGCAGTaGTATCACTTCCTGGCCTGTGAGACCTCGGGCCCCAGCCACCCT +
Preference number: 2 (lower is better)
Translates to: RLCNAQLQALPAFQQ*YHFLACETSGPSHP
Trigger: AGGGTGGCTGGGGCCCGAGGTCTCACAGGCCAGGAAGTGATACAACTGCTGAAATGCAGGAAGGGCCTGCAACTGGGCATTGCAAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR TCA 90 bp CACCATGTGCCCTTCCAAATGCTGGGGTCTACAGACCAGGCGAGGGGAGTCCGCCCATTCCTTTGTGGCTaGCTTCCAGTTGTCCCAAGC +
Preference number: 2 (lower is better)
Translates to: HHVPFQMLGSTDQARGVRPFLCG*LPVVPS
Trigger: GCTTGGGACAACTGGAAGTCAGCCACAAAGGAATGG...GCGGACTCCCCTCGCCTGGTCTGTAGACCCCAGCATTTGGAAGGGCACATGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR TCA 90 bp ACGCTAGGTTGCCTGACATGGCCTGTGCTTTTAGTAACACCCCTTCCCATCCCATCACTTCCTGGCCTGTaGGACCTCGGGCCCCAGCCA +
Preference number: 2 (lower is better)
Translates to: TLGCLTWPVLLVTPLPIPSLPGL*DLGPQP
Trigger: TGGCTGGGGCCCGAGGTCTCACAGGCCAGGAAGTGA...TGGGATGGGAAGGGGTGTTACTAAAAGCACAGGCCATGTCAGGCAACCTAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR GCA 90 bp TTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTGGAAGGGCTTGACAAGAGCATaGTTTGCCCACTTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: FSWVAHLIRGTSLCSRWKGLTRA*FAHFPS
Trigger: GGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCC...CTTCCACCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CCA 90 bp CCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCAAGGGATCACCGCAGTaGTTTCCAATCTGGGGATTC +
Preference number: 2 (lower is better)
Translates to: PGDQMWWHHAASRWLSKGKGSPQ*FPIWGF
Trigger: GAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT...GCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR TCA 90 bp CAGACGCTAGGTTGCCTGACATGGCCTGTGCTTTTAGTAACACCCCTTCCCATCTCTCCCATTGTCCTGTaGGGTCCCCGGCGCCAGGAT +
Preference number: 2 (lower is better)
Translates to: QTLGCLTWPVLLVTPLPISPIVL*GPRRQD
Trigger: ATCCTGGCGCCGGGGACCTCACAGGACAATGGGAGA...GATGGGAAGGGGTGTTACTAAAAGCACAGGCCATGTCAGGCAACCTAGCGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR TCA 90 bp GGGAGGGTTGAGCCCGACCCACAACTGGTCAGGAATCCAGTGAACATCTCCACGTGCTTGCAGCTGGCTTaGCAAGAGCATGCTTTGCCC +
Preference number: 2 (lower is better)
Translates to: GRVEPDPQLVRNPVNISTCLQLA*QEHALP
Trigger: GGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCA...CGTGGAGATGTTCACTGGATTCCTGACCAGTTGTGGGTCGGGCTCAACCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR TCA 90 bp ACTTCTTCCCCAGCAGCATCCAGCCAGACACTCGCACAGCAGTCACTAAATGCAGACATCTCTGGTGGGTaGGCCTGGGTCAGGGTCTGG +
Preference number: 2 (lower is better)
Translates to: TSSPAASSQTLAQQSLNADISGG*AWVRVW
Trigger: CCAGACCCTGACCCAGGCTCACCCACCAGAGATGTC...TGCATTTAGTGACTGCTGTGCGAGTGTCTGGCTGGATGCTGCTGGGGAAGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR TCA 90 bp CAGAGGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTAAGCCCTGGGGTGGTTaGACCAACAAAGGGATCACC +
Preference number: 2 (lower is better)
Translates to: QREAEGGSPNQCCRSLPAKPWGG*TNKGIT
Trigger: GGTGATCCCTTTGTTGGTTCAACCACCCCAGGGCTT...AGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR TCA 90 bp AGTCTGAGGCTGTCTCCAGCTCCAACAATGGATGTTTCCGGATCTGTCACCTTAGCCTGTGGGGCAGCCTaGGACCAGCTCCTGTGTGCC +
Preference number: 2 (lower is better)
Translates to: SLRLSPAPTMDVSGSVTLACGAA*DQLLCA
Trigger: GGCACACAGGAGCTGGTCTCAGGCTGCCCCACAGGC...TAAGGTGACAGATCCGGAAACATCCATTGTTGGAGCTGGAGACAGCCTCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR GCA 90 bp GCGAGGGGAGTCCGCCATCCTGTACTGTGCCCCAGGGAGCCACGGCACAAAGCTCTGCAGGTCACTTCCTaGTTGGAAATTATAGGGAAG +
Preference number: 2 (lower is better)
Translates to: ARGVRHPVLCPREPRHKALQVTS*LEIIGK
Trigger: CTTCCCTATAATTTCCAAGCAGGAAGTGACCTGCAG...AGCTTTGTGCCGTGGCTCCCTGGGGCACAGTACAGGATGGCGGACTCCCCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR GCA 90 bp CACCATGTGCCCTTCCAAATGCTGGGGTCTACAGACCAGGCGAGGGGAGTCCGCATCGTTGGGTTACGCTaGAAAGGTCGTCTTGGCTTG +
Preference number: 2 (lower is better)
Translates to: HHVPFQMLGSTDQARGVRIVGLR*KGRLGL
Trigger: CAAGCCAAGACGACCTTTGCAGCGTAACCCAACGAT...GCGGACTCCCCTCGCCTGGTCTGTAGACCCCAGCATTTGGAAGGGCACATGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR CCA 90 bp TTCCTGCCTGAACCTACTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGCATCTGGCCCGGGAGAATAAGTaGCTCTGCCTTGGAAACATG +
Preference number: 2 (lower is better)
Translates to: FLPEPTGLPEQVLPLEHLARENK*LCLGNM
Trigger: CATGTTTCCAAGGCAGAGCCACTTATTCTCCCGGGC...CAGATGCTCCAGGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCAGGCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CCA 90 bp TCCTGTGTGCAGTGGGATGGACTGTTCACCCCAGGAGTGCTCCATTGGCCTTGCTGCCCTTCCAAATGCTaGGGTCTACAGACCAGGCGA +
Preference number: 2 (lower is better)
Translates to: SCVQWDGLFTPGVLHWPCCPSKC*GLQTRR
Trigger: TCGCCTGGTCTGTAGACCCCAGCATTTGGAAGGGCA...GCAAGGCCAATGGAGCACTCCTGGGGTGAACAGTCCATCCCACTGCACACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR TCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGATCTTGTTGGGAGCTATaGGATCCGTCCTGGACTCTC +
Preference number: 2 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGSCWEL*DPSWTL
Trigger: GAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGA...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR TCA 90 bp CAGGAATCCAGTGAACATCTCCACGGACTGATGGTTTCACTGCAGGCAGGCCCCATGGGAACGATGCAGTaGCTGCTTGCAGCTGGCTTG +
Preference number: 2 (lower is better)
Translates to: QESSEHLHGLMVSLQAGPMGTMQ*LLAAGL
Trigger: CAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCAT...GGGGCCTGCCTGCAGTGAAACCATCAGTCCGTGGAGATGTTCACTGGATTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR TCA 90 bp GGGGAGCATGAAGTCACAAGACGACGGACGTCTGAGCTCCTGGGACTCCTGGAGTGGAACTCAATGTGCTaGGGCTGCCTTTCTTACGTC +
Preference number: 2 (lower is better)
Translates to: GEHEVTRRRTSELLGLLEWNSMC*GCLSYV
Trigger: GACGTAAGAAAGGCAGCCTCAGCACATTGAGTTCCA...CTCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTTGTGACTTCATGCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR TCA 90 bp GAGGCAGGTCCTGCTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGTTCACAGCTTTCATGTaGTTTCTGCCCAGGATTCAA +
Preference number: 2 (lower is better)
Translates to: EAGPAEELPEGRCRVLSLFTAFM*FLPRIQ
Trigger: TTGAATCCTGGGCAGAAATCACATGAAAGCTGTGAA...CAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAGCAGGACCTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR TCA 90 bp TCCTGTGTGCAGTGGGATGGACTGTTCACCCCAGGAGTGCTCCATTGGCCTTGCAAACATGTGGCTCACTaGCGTTTCCCCGCTCAACAG +
Preference number: 2 (lower is better)
Translates to: SCVQWDGLFTPGVLHWPCKHVAH*RFPAQQ
Trigger: CTGTTGAGCGGGGAAACGTCAGTGAGCCACATGTTT...GCAAGGCCAATGGAGCACTCCTGGGGTGAACAGTCCATCCCACTGCACACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR GCA 90 bp CAGAGGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTGATGCAGTGACTGCTTaGAGCTGGCTTGACAAGAGC +
Preference number: 2 (lower is better)
Translates to: QREAEGGSPNQCCRSLPADAVTA*SWLDKS
Trigger: GCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATC...AGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR GCA 90 bp TCTACCAAAGTGAACCTACTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGCATCGCTGGATGGGAACGATaGAGTGACTGCTTGCAGCTG +
Preference number: 2 (lower is better)
Translates to: STKVNLLGCQSRSCPWSIAGWER*SDCLQL
Trigger: CAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGC...GATGCTCCAGGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCACTTTGGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324058.9
3UTR-3UTR CCA 90 bp GTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGATGGAGTCTATGAAATaGCTCCGGAGAATGAGTGGC +
Preference number: 2 (lower is better)
Translates to: VLFSWVAHLIRGTSLCSRMESMK*LRRMSG
Trigger: GCCACTCATTCTCCGGAGCCATTTCATAGACTCCAT...CCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGGGAAGGGGTGCTGGATaGGAACGATGCAGTGACTGC +
Preference number: 2 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGGRGAG*ERCSDC
Trigger: GCAGTCACTGCATCGTTCCCATCCAGCACCCCTTCC...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CCA 90 bp CTAGACCCAGACGGCAATTCATGGCCCGGGAGAATAAGTGGCTCTGCCTTGGAAGAAGTGCTCTTCTCCTaGGTCGCCCACCTGATTCGG +
Preference number: 2 (lower is better)
Translates to: LDPDGNSWPGRISGSALEEVLFS*VAHLIR
Trigger: CCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTC...TTCCAAGGCAGAGCCACTTATTCTCCCGGGCCATGAATTGCCGTCTGGGTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR CCA 90 bp CAGAGGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTCCTAGACTCTCTTTTTaGGGGGCTGCCCTCAGGATA +
Preference number: 2 (lower is better)
Translates to: QREAEGGSPNQCCRSLPAPRLSF*GAALRI
Trigger: TATCCTGAGGGCAGCCCCCCAAAAAGAGAGTCTAGG...AGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CCA 90 bp GGCAGAGTGCACTCCGAGACAACCGTCAGTGAAATACCTAAGTCGAAGGAACTGGCCTGGGTCAGGGTCTaGTGTGTGTCGTCCAAGCCC +
Preference number: 2 (lower is better)
Translates to: GRVHSETTVSEIPKSKELAWVRV*CVSSKP
Trigger: GGGCTTGGACGACACACACCAGACCCTGACCCAGGC...CAGTTCCTTCGACTTAGGTATTTCACTGACGGTTGTCTCGGAGTGCACTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGAAGGGAAGCCCTGGGGTaGTTGAACCAACAAAGGGAT +
Preference number: 2 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGREALG*LNQQRD
Trigger: ATCCCTTTGTTGGTTCAACCACCCCAGGGCTTCCCT...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CCA 90 bp CAGGAATCCAGTGAACATCTCCACGGACTGATGGTTTCACTGCAGGCAGGCCCCCCAGACGGCAATTCATaGCCCGGGAGAATAAGTGGC +
Preference number: 2 (lower is better)
Translates to: QESSEHLHGLMVSLQAGPPDGNS*PGRISG
Trigger: GCCACTTATTCTCCCGGGCCATGAATTGCCGTCTGG...GGGGCCTGCCTGCAGTGAAACCATCAGTCCGTGGAGATGTTCACTGGATTCCTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR CAA 90 bp CAGGGAAGTCCGCCATTGTTGTTTGCTGACAGTCCGTGTGACAAATaGTTTTCTGCTGCAGAGCCAGGCTGGACCGTCTGGCTGGTCTCC +
Preference number: 2 (lower is better)
Translates to: QGSPPLLFADSPCDK*FSAAEPGWTVWLVS
Trigger: GGAGACCAGCCAGACGGTCCAGCCTGGCTCTGCAGCAGAAAACAATTTGTCACACGGACTGTCAGCAAACAACAATGGCGGACTTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR TCA 90 bp CTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGGACCACTCCCGTGTCTGCCTTGGAAACATaGTTTATTAGGGAATCGTTG +
Preference number: 2 (lower is better)
Translates to: LKSFRRGGVGSCRWTTPVSALET*FIRESL
Trigger: CAACGATTCCCTAATAAATCATGTTTCCAAGGCAGA...CACGGGAGTGGTCCAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR GCA 90 bp TTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTGGAAGTCCTTCATGCCACATTaGCTGGCATCCAGTGGATAT +
Preference number: 2 (lower is better)
Translates to: FSWVAHLIRGTSLCSRWKSFMPH*LASSGY
Trigger: ATATCCACTGGATGCCAGGCAATGTGGCATGAAGGA...CTTCCACCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR GCA 90 bp ACGCTAGGTTGCCTGACATGGCCTGTGCTTTTAGTAACACCCCTTCCCATCCCATCACCCACCGGACACTaGCCAGCCATTCCTTTGTGG +
Preference number: 2 (lower is better)
Translates to: TLGCLTWPVLLVTPLPIPSPTGH*PAIPLW
Trigger: CCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGA...TGGGATGGGAAGGGGTGTTACTAAAAGCACAGGCCATGTCAGGCAACCTAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR GCA 90 bp GTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGCACAGTTCAGTTTTATaGCTCAGGGCCTTTGCACAT +
Preference number: 2 (lower is better)
Translates to: VLFSWVAHLIRGTSLCSRHSSVL*LRAFAH
Trigger: ATGTGCAAAGGCCCTGAGGCATAAAACTGAACTGTG...CCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR GCA 90 bp TCCTGTGTGCAGTGGGATGGACTGTTCACCCCAGGAGTGCTCCATTGGCCTTGCTCCTCCCTGGGCCTCTaGATTTTCACCCATAACATG +
Preference number: 2 (lower is better)
Translates to: SCVQWDGLFTPGVLHWPCSSLGL*IFTHNM
Trigger: CATGTTATGGGTGAAAATGCAGAGGCCCAGGGAGGA...GCAAGGCCAATGGAGCACTCCTGGGGTGAACAGTCCATCCCACTGCACACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CCA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCCCAGTTGAGAACCTCTaGACCAATCATTCAATAGGT +
Preference number: 2 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSPVENL*TNHSIG
Trigger: ACCTATTGAATGATTGGTCCAGAGGTTCTCAACTGG...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CCA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCTTGCCTGGCATCCAGTaGATATCAACAGACGTTTTT +
Preference number: 2 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSLPGIQ*ISTDVF
Trigger: AAAAACGTCTGTTGATATCCACTGGATGCCAGGCAA...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CCA 90 bp CTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGGACCACTCCCGTGCAATCCAGGAATACATaGATGAATGTGCTAACCCAT +
Preference number: 2 (lower is better)
Translates to: LKSFRRGGVGSCRWTTPVQSRNT*MNVLTH
Trigger: ATGGGTTAGCACATTCATCCATGTATTCCTGGATTG...CACGGGAGTGGTCCAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR CCA 90 bp CAGAGGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTAAGGGATCACCGCAGTaGTTTCCAATCTGGGGATTC +
Preference number: 2 (lower is better)
Translates to: QREAEGGSPNQCCRSLPAKGSPQ*FPIWGF
Trigger: GAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT...AGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CCA 90 bp TCCTGTGTGCAGTGGGATGGACTGTTCACCCCAGGAGTGCTCCATTGGCCTTGCAAGGGATCACCGCAGTaGTTTCCAATCTGGGGATTC +
Preference number: 2 (lower is better)
Translates to: SCVQWDGLFTPGVLHWPCKGSPQ*FPIWGF
Trigger: GAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT...GCAAGGCCAATGGAGCACTCCTGGGGTGAACAGTCCATCCCACTGCACACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CCA 90 bp TTGTTGCAGCCCATTGGTCTGCAGAGCGATCAAACCACACTACCTCAGCGTGTCCATGCCTGGGCACTTTaGGGTGCTGTGGTCAGTTGG +
Preference number: 2 (lower is better)
Translates to: LLQPIGLQSDQTTLPQRVHAWAL*GAVVSW
Trigger: CCAACTGACCACAGCACCCCAAAGTGCCCAGGCATG...GACACGCTGAGGTAGTGTGGTTTGATCGCTCTGCAGACCAATGGGCTGCAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 90 bp TCCTCGCAGGGTTTAGGGCTCCGCCTCCAGGGAAGTCCGCCATTGTaGTTTGCTGACAGTCCGTGTGACAAATTGTTTTCTGCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: SSQGLGLRLQGSPPL*FADSPCDKLFSAAE
Trigger: CTCTGCAGCAGAAAACAATTTGTCACACGGACTGTCAGCAAACAACAATGGCGGACTTCCCTGGAGGCGGAGCCCTAAACCCTGCGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 90 bp CCTTCCTCGCAGGGTTTAGGGCTCCGCCTCCAGGGAAGTCCGCCATaGTTGTTTGCTGACAGTCCGTGTGACAAATTGTTTTCTGCTGCA +
Preference number: 2 (lower is better)
Translates to: PSSQGLGLRLQGSPP*LFADSPCDKLFSAA
Trigger: TGCAGCAGAAAACAATTTGTCACACGGACTGTCAGCAAACAACAATGGCGGACTTCCCTGGAGGCGGAGCCCTAAACCCTGCGAGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR GCA 90 bp CCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCAAATATTTCCTATGCTaGCTTGACATTGCCAAAGCC +
Preference number: 2 (lower is better)
Translates to: PGDQMWWHHAASRWLSKGKYFLC*LDIAKA
Trigger: GGCTTTGGCAATGTCAAGGCAGCATAGGAAATATTT...GCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR GCA 90 bp ACTTCTTCCCCAGCAGCATCCAGCCAGACACTCGCACAGCAGTCACTAAATGCACGGGCTGTAATTCTTTaGTGTAGGAGGCTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: TSSPAASSQTLAQQSLNARAVIL*CRRLAW
Trigger: CCAGGCCAGCCTCCTACAGCAAAGAATTACAGCCCG...TGCATTTAGTGACTGCTGTGCGAGTGTCTGGCTGGATGCTGCTGGGGAAGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR GCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGATCCTTCATGCCACATTaGCTGGCATCCAGTGGATAT +
Preference number: 2 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGSFMPH*LASSGY
Trigger: ATATCCACTGGATGCCAGGCAATGTGGCATGAAGGA...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR GCA 90 bp TTGTTGCAGCCCATTGGTCTGCAGAGCGATCAAACCACACTACCTCAGCGTGTCGGCTTGACAAGAGCATaGTTTGCCCACTTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: LLQPIGLQSDQTTLPQRVGLTRA*FAHFPS
Trigger: GGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCC...GACACGCTGAGGTAGTGTGGTTTGATCGCTCTGCAGACCAATGGGCTGCAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR GCA 90 bp CTAGACCCAGACGGCAATTCATGGCCCGGGAGAATAAGTGGCTCTGCCTTGGAAGATGCAGTGACTGCTTaGAGCTGGCTTGACAAGAGC +
Preference number: 2 (lower is better)
Translates to: LDPDGNSWPGRISGSALEDAVTA*SWLDKS
Trigger: GCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATC...TTCCAAGGCAGAGCCACTTATTCTCCCGGGCCATGAATTGCCGTCTGGGTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR GCA 90 bp GACAAGCAGGTAGCAGAGCTGGAAGTAGAATCAAGGCTTTGCAATGCCCAGTTGCTGGCTGTCCTCGGCTaGACCGGGTTTCTGTCCTCT +
Preference number: 2 (lower is better)
Translates to: DKQVAELEVESRLCNAQLLAVLG*TGFLSS
Trigger: AGAGGACAGAAACCCGGTGCAGCCGAGGACAGCCAG...CAACTGGGCATTGCAAAGCCTTGATTCTACTTCCAGCTCTGCTACCTGCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR GCA 90 bp ACGCTAGGTTGCCTGACATGGCCTGTGCTTTTAGTAACACCCCTTCCCATCCCACAAGGAGCCACCATGTaGCCTTCCAAATGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: TLGCLTWPVLLVTPLPIPQGATM*PSKCWG
Trigger: ACCCCAGCATTTGGAAGGGCACATGGTGGCTCCTTG...TGGGATGGGAAGGGGTGTTACTAAAAGCACAGGCCATGTCAGGCAACCTAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR GCA 90 bp AGTCTGAGGCTGTCTCCAGCTCCAACAATGGATGTTTCCGGATCTGTCACCTTACTGAACCTACTGGGTTaGCAGAGCAGGTCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: SLRLSPAPTMDVSGSVTLLNLLG*QSRSCP
Trigger: GGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCAG...TAAGGTGACAGATCCGGAAACATCCATTGTTGGAGCTGGAGACAGCCTCAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR GCA 90 bp TGTGACAAATTGTTTTCTGCTGCAGAGCCAGGCTGGACCGTCTGGCTGGTCTCCTGTGTGCCAAGTTCCTaGCTGAACCTACTGGGTTGC +
Preference number: 2 (lower is better)
Translates to: CDKLFSAAEPGWTVWLVSCVPSS*LNLLGC
Trigger: GCAACCCAGTAGGTTCAGGCAGGAACTTGGCACACA...GGAGACCAGCCAGACGGTCCAGCCTGGCTCTGCAGCAGAAAACAATTTGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CCA 90 bp GGCAGAGTGCACTCCGAGACAACCGTCAGTGAAATACCTAAGTCGAAGGAACTGGGAAGGGGTGCTGGATaGGAACGATGCAGTGACTGC +
Preference number: 2 (lower is better)
Translates to: GRVHSETTVSEIPKSKELGRGAG*ERCSDC
Trigger: GCAGTCACTGCATCGTTCCCATCCAGCACCCCTTCC...CAGTTCCTTCGACTTAGGTATTTCACTGACGGTTGTCTCGGAGTGCACTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CCA 90 bp GCTGCAAAGGTCGTCTTGGCTTGCTTTAATGGATTTCCTGGGTTGCCTTTCTGCGGAGACCAGATGTGGTaGCACCACGCTGCATCTCGC +
Preference number: 2 (lower is better)
Translates to: AAKVVLACFNGFPGLPFCGDQMW*HHAASR
Trigger: GCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCC...GCAGAAAGGCAACCCAGGAAATCCATTAAAGCAAGCCAAGACGACCTTTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR CAA 90 bp GACACTTGCGTGCGTGCTGATTTACTCACAGGAGTATCTCTCCCATaGTCCTGTGAGGTCCCCGGCGCCAGGATCAACATTGACTTGTCT +
Preference number: 2 (lower is better)
Translates to: DTCVRADLLTGVSLP*SCEVPGARINIDLS
Trigger: AGACAAGTCAATGTTGATCCTGGCGCCGGGGACCTCACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACGCACGCAAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR TCA 90 bp CAGGAATCCAGTGAACATCTCCACGGACTGATGGTTTCACTGCAGGCAGGCCCCTCAGCCTTGAGTTTATaGATGAGGGCGCATAGGAGA +
Preference number: 2 (lower is better)
Translates to: QESSEHLHGLMVSLQAGPSALSL*MRAHRR
Trigger: TCTCCTATGCGCCCTCATTCATAAACTCAAGGCTGA...GGGGCCTGCCTGCAGTGAAACCATCAGTCCGTGGAGATGTTCACTGGATTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR TCA 90 bp GGCAGAGTGCACTCCGAGACAACCGTCAGTGAAATACCTAAGTCGAAGGAACTGTGCCAAGTTCCTGCCTaGACCTACTGGGTTGCCAGA +
Preference number: 2 (lower is better)
Translates to: GRVHSETTVSEIPKSKELCQVPA*TYWVAR
Trigger: TCTGGCAACCCAGTAGGTTCAGGCAGGAACTTGGCA...CAGTTCCTTCGACTTAGGTATTTCACTGACGGTTGTCTCGGAGTGCACTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR GCA 90 bp GGGAGGGTTGAGCCCGACCCACAACTGGTCAGGAATCCAGTGAACATCTCCACGAAGGTCGTCTTGGCTTaGTTTAATGGATTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: GRVEPDPQLVRNPVNISTKVVLA*FNGFPG
Trigger: CCCAGGAAATCCATTAAAGCAAGCCAAGACGACCTT...CGTGGAGATGTTCACTGGATTCCTGACCAGTTGTGGGTCGGGCTCAACCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR GCA 90 bp TGTGACAAATTGTTTTCTGCTGCAGAGCCAGGCTGGACCGTCTGGCTGGTCTCCATCGTTGGGTTACGCTaGAAAGGTCGTCTTGGCTTG +
Preference number: 2 (lower is better)
Translates to: CDKLFSAAEPGWTVWLVSIVGLR*KGRLGL
Trigger: CAAGCCAAGACGACCTTTGCAGCGTAACCCAACGAT...GGAGACCAGCCAGACGGTCCAGCCTGGCTCTGCAGCAGAAAACAATTTGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGAAATGTCTCCAGACATaGCCAGATTTTCCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGKCLQT*PDFPWG
Trigger: CCCCCAGGGAAAATCTGGCCATGTCTGGAGACATTT...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CCA 90 bp GACAAGCAGGTAGCAGAGCTGGAAGTAGAATCAAGGCTTTGCAATGCCCAGTTGGGACGTCTGAGCTCCTaGGACTCCTGGAGACCAGAT +
Preference number: 2 (lower is better)
Translates to: DKQVAELEVESRLCNAQLGRLSS*DSWRPD
Trigger: ATCTGGTCTCCAGGAGTCCCAGGAGCTCAGACGTCC...CAACTGGGCATTGCAAAGCCTTGATTCTACTTCCAGCTCTGCTACCTGCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CCA 90 bp GACAAGCAGGTAGCAGAGCTGGAAGTAGAATCAAGGCTTTGCAATGCCCAGTTGATGAGGCTGCATGCCTaGGCACTTTGGGGTGCTGTG +
Preference number: 2 (lower is better)
Translates to: DKQVAELEVESRLCNAQLMRLHA*ALWGAV
Trigger: CACAGCACCCCAAAGTGCCCAGGCATGCAGCCTCAT...CAACTGGGCATTGCAAAGCCTTGATTCTACTTCCAGCTCTGCTACCTGCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CCA 90 bp CAGACGCTAGGTTGCCTGACATGGCCTGTGCTTTTAGTAACACCCCTTCCCATCTGCCAGTACCCGCTGTaGACTGGAAACTCTCTAAGG +
Preference number: 2 (lower is better)
Translates to: QTLGCLTWPVLLVTPLPICQYPL*TGNSLR
Trigger: CCTTAGAGAGTTTCCAGTCCACAGCGGGTACTGGCA...GATGGGAAGGGGTGTTACTAAAAGCACAGGCCATGTCAGGCAACCTAGCGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 90 bp GCAGGTCACTTCCTGCTTGGAAATTATAGGGAAGCCCTGGGGTGGTaGAACCAACAAAGGGATCACCGCAGTGGTTTCCAATCTGGGGAT +
Preference number: 2 (lower is better)
Translates to: AGHFLLGNYREALGW*NQQRDHRSGFQSGD
Trigger: ATCCCCAGATTGGAAACCACTGCGGTGATCCCTTTGTTGGTTCAACCACCCCAGGGCTTCCCTATAATTTCCAAGCAGGAAGTGACCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR CAA 90 bp CAGGTAGCAGAGCTGGAAGTAGAATCAAGGCTTTGCAATGCCCAGTaGCAGGCCCTTCCTGCATTTCAGCAGTTGTATCACTTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: QVAELEVESRLCNAQ*QALPAFQQLYHFLA
Trigger: GGCCAGGAAGTGATACAACTGCTGAAATGCAGGAAGGGCCTGCAACTGGGCATTGCAAAGCCTTGATTCTACTTCCAGCTCTGCTACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 90 bp GACCTGGGACAAGCAGGTAGCAGAGCTGGAAGTAGAATCAAGGCTTaGCAATGCCCAGTTGCAGGCCCTTCCTGCATTTCAGCAGTTGTA +
Preference number: 2 (lower is better)
Translates to: DLGQAGSRAGSRIKA*QCPVAGPSCISAVV
Trigger: TACAACTGCTGAAATGCAGGAAGGGCCTGCAACTGGGCATTGCAAAGCCTTGATTCTACTTCCAGCTCTGCTACCTGCTTGTCCCAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR GCA 90 bp GTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGAATGAGGGCTCTGATTaGTACCAATTTCTTAAAGCA +
Preference number: 2 (lower is better)
Translates to: VLFSWVAHLIRGTSLCSRNEGSD*YQFLKA
Trigger: TGCTTTAAGAAATTGGTAGCAATCAGAGCCCTCATT...CCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR GCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGTCCTTCATGCCACATTaGCTGGCATCCAGTGGATAT +
Preference number: 2 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGSFMPH*LASSGY
Trigger: ATATCCACTGGATGCCAGGCAATGTGGCATGAAGGA...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR GCA 90 bp AATGGAGCGATCATTACAAATCCTGAAAACCCAGAGGGAGGGTTGAGCCCGACCGGATCACCAAACCAGTaGTGCAGGTCACTTCCTGCT +
Preference number: 2 (lower is better)
Translates to: NGAIITNPENPEGGLSPTGSPNQ*CRSLPA
Trigger: AGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCC...GGTCGGGCTCAACCCTCCCTCTGGGTTTTCAGGATTTGTAATGATCGCTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR CCA 90 bp ACTTCTTCCCCAGCAGCATCCAGCCAGACACTCGCACAGCAGTCACTAAATGCAAAATGTCTCCAGACATaGCCAGATTTTCCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: TSSPAASSQTLAQQSLNAKCLQT*PDFPWG
Trigger: CCCCCAGGGAAAATCTGGCCATGTCTGGAGACATTT...TGCATTTAGTGACTGCTGTGCGAGTGTCTGGCTGGATGCTGCTGGGGAAGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CCA 90 bp CTGGAGCATCTGATGGGTGGCAAGGAGCCACCATGTGCCCTTCCAAATGCTGGGCAAAACAATTCTCCATaGCTGATCTTGTTGGGAGCT +
Preference number: 2 (lower is better)
Translates to: LEHLMGGKEPPCALPNAGQNNSP*LILLGA
Trigger: AGCTCCCAACAAGATCAGCCATGGAGAATTGTTTTG...CCCAGCATTTGGAAGGGCACATGGTGGCTCCTTGCCACCCATCAGATGCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR CCA 90 bp TGTGACAAATTGTTTTCTGCTGCAGAGCCAGGCTGGACCGTCTGGCTGGTCTCCTCATGCCACATTGCCTaGCATCCAGTGGATATCAAC +
Preference number: 2 (lower is better)
Translates to: CDKLFSAAEPGWTVWLVSSCHIA*HPVDIN
Trigger: GTTGATATCCACTGGATGCCAGGCAATGTGGCATGA...GGAGACCAGCCAGACGGTCCAGCCTGGCTCTGCAGCAGAAAACAATTTGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 90 bp ACTTTGGGGTGCTGTGGTCAGTTGGGCGCAACTCATGGACACAAGTaGAGAGAAGAAGAGCTCTTCGCTTACTCTGGAAGCAAGAAGGCT +
Preference number: 2 (lower is better)
Translates to: TLGCCGQLGATHGHK*REEELFAYSGSKKA
Trigger: AGCCTTCTTGCTTCCAGAGTAAGCGAAGAGCTCTTCTTCTCTCAACTTGTGTCCATGAGTTGCGCCCAACTGACCACAGCACCCCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 90 bp GCTGTCAAGGACAGTGATATTTTCCCCACTAAACAATGGAAGAGTTaGCAGATCAGAGAGATGGGCTCACCTGCCCAGTGCCCTCAGTGG +
Preference number: 2 (lower is better)
Translates to: AVKDSDIFPTKQWKS*QIREMGSPAQCPQW
Trigger: CCACTGAGGGCACTGGGCAGGTGAGCCCATCTCTCTGATCTGCAAACTCTTCCATTGTTTAGTGGGGAAAATATCACTGTCCTTGACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 90 bp CCAATGACACTCATGCCTCTTCCCTGCCTCACCTGCAAAAGCTGGTaGTGCAAACCCGAACTGTGGAAGAGATCATCTTATTCCCCCAAC +
Preference number: 2 (lower is better)
Translates to: PMTLMPLPCLTCKSW*CKPELWKRSSYSPN
Trigger: GTTGGGGGAATAAGATGATCTCTTCCACAGTTCGGGTTTGCACAACCAGCTTTTGCAGGTGAGGCAGGGAAGAGGCATGAGTGTCATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR TCA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGTTTCCTATGCTGCCTTaGCATTGCCAAAGCCAAACT +
Preference number: 2 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMFPMLP*HCQSQT
Trigger: AGTTTGGCTTTGGCAATGTCAAGGCAGCATAGGAAA...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR TCA 90 bp GGAAGCCCGATGCTGTCAGATACACTGATTTTCCAAGAGAAGCCAGAAATCCAGTGCTTGCAGCTGGCTTaGCAAGAGCATGCTTTGCCC +
Preference number: 2 (lower is better)
Translates to: GSPMLSDTLIFQEKPEIQCLQLA*QEHALP
Trigger: GGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCA...CTGGATTTCTGGCTTCTCTTGGAAAATCAGTGTATCTGACAGCATCGGGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR GCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGAATGAGGGCTCTGATTaGTACCAATTTCTTAAAGCA +
Preference number: 2 (lower is better)
Translates to: PQDRSALLLGRPPDSGHENEGSD*YQFLKA
Trigger: TGCTTTAAGAAATTGGTAGCAATCAGAGCCCTCATT...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR GCA 90 bp GGAAGCCCGATGCTGTCAGATACACTGATTTTCCAAGAGAAGCCAGAAATCCAGGCTGGATGGGAACGATaGAGTGACTGCTTGCAGCTG +
Preference number: 2 (lower is better)
Translates to: GSPMLSDTLIFQEKPEIQAGWER*SDCLQL
Trigger: CAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGC...CTGGATTTCTGGCTTCTCTTGGAAAATCAGTGTATCTGACAGCATCGGGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CCA 90 bp CAGACGCTAGGTTGCCTGACATGGCCTGTGCTTTTAGTAACACCCCTTCCCATCATGGAGTCTATGAAATaGCTCCGGAGAATGAGTGGC +
Preference number: 2 (lower is better)
Translates to: QTLGCLTWPVLLVTPLPIMESMK*LRRMSG
Trigger: GCCACTCATTCTCCGGAGCCATTTCATAGACTCCAT...GATGGGAAGGGGTGTTACTAAAAGCACAGGCCATGTCAGGCAACCTAGCGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CCA 90 bp ATCATTACAAATCCTGAAAACCCAGAGGGAGGGTTGAGCCCGACCCACAACTGGAAATGTCTCCAGACATaGCCAGATTTTCCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: IITNPENPEGGLSPTHNWKCLQT*PDFPWG
Trigger: CCCCCAGGGAAAATCTGGCCATGTCTGGAGACATTT...CCAGTTGTGGGTCGGGCTCAACCCTCCCTCTGGGTTTTCAGGATTTGTAATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR CCA 90 bp TACCAAAGTGAACCTACTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGCATCTGTTTCTTACGTCTCAATaGCTCCCCAATTTTCCTCGA +
Preference number: 2 (lower is better)
Translates to: YQSEPTGLPEQVLPLEHLFLTSQ*LPNFPR
Trigger: TCGAGGAAAATTGGGGAGCCATTGAGACGTAAGAAA...CAGATGCTCCAGGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCACTTTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324058.9
3UTR-3UTR CCA 90 bp TTGTTGCAGCCCATTGGTCTGCAGAGCGATCAAACCACACTACCTCAGCGTGTCACTTTTTGTGCAGGTTaGGAACTCCATCCTAGCCCA +
Preference number: 2 (lower is better)
Translates to: LLQPIGLQSDQTTLPQRVTFCAG*ELHPSP
Trigger: TGGGCTAGGATGGAGTTCCCAACCTGCACAAAAAGT...GACACGCTGAGGTAGTGTGGTTTGATCGCTCTGCAGACCAATGGGCTGCAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CCA 90 bp ACGCTAGGTTGCCTGACATGGCCTGTGCTTTTAGTAACACCCCTTCCCATCCCAGTTGGGCGCAACTCATaGACACAAGTTGAGAGAAGA +
Preference number: 2 (lower is better)
Translates to: TLGCLTWPVLLVTPLPIPVGRNS*TQVERR
Trigger: TCTTCTCTCAACTTGTGTCCATGAGTTGCGCCCAAC...TGGGATGGGAAGGGGTGTTACTAAAAGCACAGGCCATGTCAGGCAACCTAGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 90 bp ACCATGTGTGTCACCATTTGTATGTCTTGCATTTGTTGCAGCCCATaGGTCTGCAGAGCGATCAAACCACACTACCTCAGCGTGTCCCCA +
Preference number: 2 (lower is better)
Translates to: TMCVTICMSCICCSP*VCRAIKPHYLSVSP
Trigger: TGGGGACACGCTGAGGTAGTGTGGTTTGATCGCTCTGCAGACCAATGGGCTGCAACAAATGCAAGACATACAAATGGTGACACACATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR TCA 90 bp ACTTCTTCCCCAGCAGCATCCAGCCAGACACTCGCACAGCAGTCACTAAATGCATTTCCTATGCTGCCTTaGCATTGCCAAAGCCAAACT +
Preference number: 2 (lower is better)
Translates to: TSSPAASSQTLAQQSLNAFPMLP*HCQSQT
Trigger: AGTTTGGCTTTGGCAATGTCAAGGCAGCATAGGAAA...TGCATTTAGTGACTGCTGTGCGAGTGTCTGGCTGGATGCTGCTGGGGAAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR TCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGTTTCCTATGCTGCCTTaGCATTGCCAAAGCCAAACT +
Preference number: 2 (lower is better)
Translates to: VPGARINIDLSLLLHATLFPMLP*HCQSQT
Trigger: AGTTTGGCTTTGGCAATGTCAAGGCAGCATAGGAAA...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR TCA 90 bp TGTGACAAATTGTTTTCTGCTGCAGAGCCAGGCTGGACCGTCTGGCTGGTCTCCTCTCTGTCATGTTCCTaGTGCTCAAAGCTAATGACA +
Preference number: 2 (lower is better)
Translates to: CDKLFSAAEPGWTVWLVSSLSCS*CSKLMT
Trigger: TGTCATTAGCTTTGAGCATCAGGAACATGACAGAGA...GGAGACCAGCCAGACGGTCCAGCCTGGCTCTGCAGCAGAAAACAATTTGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR GCA 90 bp GGGGAGCATGAAGTCACAAGACGACGGACGTCTGAGCTCCTGGGACTCCTGGAGAGTAAATATTTCCTATaGTGCCTTGACATTGCCAAA +
Preference number: 2 (lower is better)
Translates to: GEHEVTRRRTSELLGLLESKYFL*CLDIAK
Trigger: TTTGGCAATGTCAAGGCAGCATAGGAAATATTTACT...CTCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTTGTGACTTCATGCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR GCA 90 bp TTCCTGCCTGAACCTACTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGCATCTGAGTAAATATTTCCTATaGTGCCTTGACATTGCCAAA +
Preference number: 2 (lower is better)
Translates to: FLPEPTGLPEQVLPLEHLSKYFL*CLDIAK
Trigger: TTTGGCAATGTCAAGGCAGCATAGGAAATATTTACT...CAGATGCTCCAGGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCAGGCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR GCA 90 bp ACGCTAGGTTGCCTGACATGGCCTGTGCTTTTAGTAACACCCCTTCCCATCCCACACAGTTCAGTTTTATaGCTCAGGGCCTTTGCACAT +
Preference number: 2 (lower is better)
Translates to: TLGCLTWPVLLVTPLPIPHSSVL*LRAFAH
Trigger: ATGTGCAAAGGCCCTGAGGCATAAAACTGAACTGTG...TGGGATGGGAAGGGGTGTTACTAAAAGCACAGGCCATGTCAGGCAACCTAGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR GCA 90 bp AGTCTGAGGCTGTCTCCAGCTCCAACAATGGATGTTTCCGGATCTGTCACCTTAGGTGAGGTCCAGATATaGAGGAATCACACAGACAGC +
Preference number: 2 (lower is better)
Translates to: SLRLSPAPTMDVSGSVTLGEVQI*RNHTDS
Trigger: GCTGTCTGTGTGATTCCTGCATATCTGGACCTCACC...TAAGGTGACAGATCCGGAAACATCCATTGTTGGAGCTGGAGACAGCCTCAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CCA 90 bp AATGGAGCGATCATTACAAATCCTGAAAACCCAGAGGGAGGGTTGAGCCCGACCATGGAGTCTATGAAATaGCTCCGGAGAATGAGTGGC +
Preference number: 2 (lower is better)
Translates to: NGAIITNPENPEGGLSPTMESMK*LRRMSG
Trigger: GCCACTCATTCTCCGGAGCCATTTCATAGACTCCAT...GGTCGGGCTCAACCCTCCCTCTGGGTTTTCAGGATTTGTAATGATCGCTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR CCA 90 bp CGTGCTGATTTACTCACAGGAGTATCTCTCCCATTGTCCTGTGAGGTCCCCGGCTTGCCTGGCATCCAGTaGATATCAACAGACGTTTTT +
Preference number: 2 (lower is better)
Translates to: RADLLTGVSLPLSCEVPGLPGIQ*ISTDVF
Trigger: AAAAACGTCTGTTGATATCCACTGGATGCCAGGCAA...GCCGGGGACCTCACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CCA 90 bp GACAAGCAGGTAGCAGAGCTGGAAGTAGAATCAAGGCTTTGCAATGCCCAGTTGGTGACTGCTTGCAGCTaGCTTGACAAGAGCATGCTT +
Preference number: 2 (lower is better)
Translates to: DKQVAELEVESRLCNAQLVTACS*LDKSML
Trigger: AAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC...CAACTGGGCATTGCAAAGCCTTGATTCTACTTCCAGCTCTGCTACCTGCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CCA 90 bp CTAGACCCAGACGGCAATTCATGGCCCGGGAGAATAAGTGGCTCTGCCTTGGAATTTCTTACGTCTCAATaGCTCCCCAATTTTCCTCGA +
Preference number: 2 (lower is better)
Translates to: LDPDGNSWPGRISGSALEFLTSQ*LPNFPR
Trigger: TCGAGGAAAATTGGGGAGCCATTGAGACGTAAGAAA...TTCCAAGGCAGAGCCACTTATTCTCCCGGGCCATGAATTGCCGTCTGGGTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR CAA 90 bp GGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATaGCCTGGCATCCAGTGGATATCAACAGACGTTTTTGGAGTGGAT +
Preference number: 2 (lower is better)
Translates to: GARINIDLSLLLHAT*PGIQWISTDVFGVD
Trigger: ATCCACTCCAAAAACGTCTGTTGATATCCACTGGATGCCAGGCAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR CAA 90 bp AGCCCATGTGTGTCACCCTCTGTATGTCACCATGTGTGTCACCATTaGTATGTCTTGCATTTGTTGCAGCCCATTGGTCTGCAGAGCGAT +
Preference number: 2 (lower is better)
Translates to: SPCVSPSVCHHVCHH*YVLHLLQPIGLQSD
Trigger: ATCGCTCTGCAGACCAATGGGCTGCAACAAATGCAAGACATACAAATGGTGACACACATGGTGACATACAGAGGGTGACACACATGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 90 bp AATGACATCCGAACCACGTTCAGTCCCATTTGCAGTCAAGTGGCTTaGTCACTGGACCGCAGATGTCAGTTAACCTCATCTGGGAATCAG +
Preference number: 2 (lower is better)
Translates to: NDIRTTFSPICSQVA*SLDRRCQLTSSGNQ
Trigger: CTGATTCCCAGATGAGGTTAACTGACATCTGCGGTCCAGTGACAAAGCCACTTGACTGCAAATGGGACTGAACGTGGTTCGGATGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR GCA 90 bp CGTGCTGATTTACTCACAGGAGTATCTCTCCCATTGTCCTGTGAGGTCCCCGGCAAATATTTCCTATGCTaGCTTGACATTGCCAAAGCC +
Preference number: 2 (lower is better)
Translates to: RADLLTGVSLPLSCEVPGKYFLC*LDIAKA
Trigger: GGCTTTGGCAATGTCAAGGCAGCATAGGAAATATTT...GCCGGGGACCTCACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR GCA 90 bp GGAAGCCCGATGCTGTCAGATACACTGATTTTCCAAGAGAAGCCAGAAATCCAGCCAGCTTGCTATGTTTaGCCCTGTGCTGTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: GSPMLSDTLIFQEKPEIQPACYV*PCAVFL
Trigger: AAGGAAGACAGCACAGGGGCAAACATAGCAAGCTGG...CTGGATTTCTGGCTTCTCTTGGAAAATCAGTGTATCTGACAGCATCGGGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR GCA 90 bp GGAAGCCCGATGCTGTCAGATACACTGATTTTCCAAGAGAAGCCAGAAATCCAGATCATAGGCCACCTCTaGTCTGTCGGTCAGTTGAGA +
Preference number: 2 (lower is better)
Translates to: GSPMLSDTLIFQEKPEIQIIGHL*SVGQLR
Trigger: TCTCAACTGACCGACAGAGCAGAGGTGGCCTATGAT...CTGGATTTCTGGCTTCTCTTGGAAAATCAGTGTATCTGACAGCATCGGGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGCCAGTTGAGAACCTCTaGACCAATCATTCAATAGGT +
Preference number: 2 (lower is better)
Translates to: VPGARINIDLSLLLHATLPVENL*TNHSIG
Trigger: ACCTATTGAATGATTGGTCCAGAGGTTCTCAACTGG...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGCAAAACAATTCTCCATaGCTGATCTTGTTGGGAGCT +
Preference number: 2 (lower is better)
Translates to: VPGARINIDLSLLLHATLQNNSP*LILLGA
Trigger: AGCTCCCAACAAGATCAGCCATGGAGAATTGTTTTG...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CCA 90 bp ACTTCTTCCCCAGCAGCATCCAGCCAGACACTCGCACAGCAGTCACTAAATGCATTGCCTGGCATCCAGTaGATATCAACAGACGTTTTT +
Preference number: 2 (lower is better)
Translates to: TSSPAASSQTLAQQSLNALPGIQ*ISTDVF
Trigger: AAAAACGTCTGTTGATATCCACTGGATGCCAGGCAA...TGCATTTAGTGACTGCTGTGCGAGTGTCTGGCTGGATGCTGCTGGGGAAGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CCA 90 bp TGTCCTCTCTCTGTCATGTTCCTGATGCTCAAAGCTAATGACATTGTCCCAAAAGGAAGGGGTGCTGGATaGGAACGATGCAGTGACTGC +
Preference number: 2 (lower is better)
Translates to: CPLSVMFLMLKANDIVPKGRGAG*ERCSDC
Trigger: GCAGTCACTGCATCGTTCCCATCCAGCACCCCTTCC...TTTTGGGACAATGTCATTAGCTTTGAGCATCAGGAACATGACAGAGAGAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CCA 90 bp TGTCCTCTCTCTGTCATGTTCCTGATGCTCAAAGCTAATGACATTGTCCCAAAAGAAGTGCTCTTCTCCTaGGTCGCCCACCTGATTCGG +
Preference number: 2 (lower is better)
Translates to: CPLSVMFLMLKANDIVPKEVLFS*VAHLIR
Trigger: CCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTC...TTTTGGGACAATGTCATTAGCTTTGAGCATCAGGAACATGACAGAGAGAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGCAATCCAGGAATACATaGATGAATGTGCTAACCCAT +
Preference number: 2 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGQSRNT*MNVLTH
Trigger: ATGGGTTAGCACATTCATCCATGTATTCCTGGATTG...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CCA 90 bp TTGTTGCAGCCCATTGGTCTGCAGAGCGATCAAACCACACTACCTCAGCGTGTCCTGCAAAGGTCGTCTTaGCTTGCTTTAATGGATTTC +
Preference number: 2 (lower is better)
Translates to: LLQPIGLQSDQTTLPQRVLQRSS*LALMDF
Trigger: GAAATCCATTAAAGCAAGCCAAGACGACCTTTGCAG...GACACGCTGAGGTAGTGTGGTTTGATCGCTCTGCAGACCAATGGGCTGCAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CCA 90 bp ATCATTACAAATCCTGAAAACCCAGAGGGAGGGTTGAGCCCGACCCACAACTGGTTATTAGGGAATCGTTaGGTTACGCTGCAAAGGTCG +
Preference number: 2 (lower is better)
Translates to: IITNPENPEGGLSPTHNWLLGNR*VTLQRS
Trigger: CGACCTTTGCAGCGTAACCCAACGATTCCCTAATAA...CCAGTTGTGGGTCGGGCTCAACCCTCCCTCTGGGTTTTCAGGATTTGTAATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR CCA 90 bp GGCAGAGTGCACTCCGAGACAACCGTCAGTGAAATACCTAAGTCGAAGGAACTGTTATTAGGGAATCGTTaGGTTACGCTGCAAAGGTCG +
Preference number: 2 (lower is better)
Translates to: GRVHSETTVSEIPKSKELLLGNR*VTLQRS
Trigger: CGACCTTTGCAGCGTAACCCAACGATTCCCTAATAA...CAGTTCCTTCGACTTAGGTATTTCACTGACGGTTGTCTCGGAGTGCACTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CCA 90 bp GACAAGCAGGTAGCAGAGCTGGAAGTAGAATCAAGGCTTTGCAATGCCCAGTTGTTCACTGCATCTTCCTaGGCGATGCTGAGATTTCAC +
Preference number: 2 (lower is better)
Translates to: DKQVAELEVESRLCNAQLFTASS*AMLRFH
Trigger: GTGAAATCTCAGCATCGCCCAGGAAGATGCAGTGAA...CAACTGGGCATTGCAAAGCCTTGATTCTACTTCCAGCTCTGCTACCTGCTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CCA 90 bp TTGTTGCAGCCCATTGGTCTGCAGAGCGATCAAACCACACTACCTCAGCGTGTCCCCAATTGCATTCAATaGTCAATGCACAACATCTCC +
Preference number: 2 (lower is better)
Translates to: LLQPIGLQSDQTTLPQRVPNCIQ*SMHNIS
Trigger: GGAGATGTTGTGCATTGACCATTGAATGCAATTGGG...GACACGCTGAGGTAGTGTGGTTTGATCGCTCTGCAGACCAATGGGCTGCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR GCA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGAATGAGGGCTCTGATTaGTACCAATTTCTTAAAGCA +
Preference number: 2 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMNEGSD*YQFLKA
Trigger: TGCTTTAAGAAATTGGTAGCAATCAGAGCCCTCATT...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR GCA 90 bp TGTCCTCTCTCTGTCATGTTCCTGATGCTCAAAGCTAATGACATTGTCCCAAAAGGCTTGACAAGAGCATaGTTTGCCCACTTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: CPLSVMFLMLKANDIVPKGLTRA*FAHFPS
Trigger: GGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCC...TTTTGGGACAATGTCATTAGCTTTGAGCATCAGGAACATGACAGAGAGAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR GCA 90 bp TGTCCTCTCTCTGTCATGTTCCTGATGCTCAAAGCTAATGACATTGTCCCAAAAGCTGGATGGGAACGATaGAGTGACTGCTTGCAGCTG +
Preference number: 2 (lower is better)
Translates to: CPLSVMFLMLKANDIVPKAGWER*SDCLQL
Trigger: CAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGC...TTTTGGGACAATGTCATTAGCTTTGAGCATCAGGAACATGACAGAGAGAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR GCA 90 bp GGCAGAGTGCACTCCGAGACAACCGTCAGTGAAATACCTAAGTCGAAGGAACTGCTTTCATGTGATTTCTaGCCAGGATTCAACCTGGAA +
Preference number: 2 (lower is better)
Translates to: GRVHSETTVSEIPKSKELLSCDF*PGFNLE
Trigger: TTCCAGGTTGAATCCTGGGCAGAAATCACATGAAAG...CAGTTCCTTCGACTTAGGTATTTCACTGACGGTTGTCTCGGAGTGCACTCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 90 bp AGAGTCCTTTCTGCCGAGACTAGGGGTGCTTGGCTACTAGGGTGCTaGTCTACCAATCTTATTTGCAAATCTGATGAAATCCATGCTCCT +
Preference number: 2 (lower is better)
Translates to: RVLSAETRGAWLLGC*STNLICKSDEIHAP
Trigger: AGGAGCATGGATTTCATCAGATTTGCAAATAAGATTGGTAGACAAGCACCCTAGTAGCCAAGCACCCCTAGTCTCGGCAGAAAGGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 90 bp TCTGTATGTCACCATGTGTGTCACCATTTGTATGTCTTGCATTTGTaGCAGCCCATTGGTCTGCAGAGCGATCAAACCACACTACCTCAG +
Preference number: 2 (lower is better)
Translates to: SVCHHVCHHLYVLHL*QPIGLQSDQTTLPQ
Trigger: CTGAGGTAGTGTGGTTTGATCGCTCTGCAGACCAATGGGCTGCAACAAATGCAAGACATACAAATGGTGACACACATGGTGACATACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR TCA 90 bp GGCAGAGTGCACTCCGAGACAACCGTCAGTGAAATACCTAAGTCGAAGGAACTGACACAACAAGGATCCTaGCACTTGGAAAGAATCTTA +
Preference number: 2 (lower is better)
Translates to: GRVHSETTVSEIPKSKELTQQGS*HLERIL
Trigger: TAAGATTCTTTCCAAGTGTCAGGATCCTTGTTGTGT...CAGTTCCTTCGACTTAGGTATTTCACTGACGGTTGTCTCGGAGTGCACTCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR GCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGAGTAAATATTTCCTATaGTGCCTTGACATTGCCAAA +
Preference number: 2 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGSKYFL*CLDIAK
Trigger: TTTGGCAATGTCAAGGCAGCATAGGAAATATTTACT...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR GCA 90 bp TGTCCTCTCTCTGTCATGTTCCTGATGCTCAAAGCTAATGACATTGTCCCAAAAGGATCACCAAACCAGTaGTGCAGGTCACTTCCTGCT +
Preference number: 2 (lower is better)
Translates to: CPLSVMFLMLKANDIVPKGSPNQ*CRSLPA
Trigger: AGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCC...TTTTGGGACAATGTCATTAGCTTTGAGCATCAGGAACATGACAGAGAGAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR GCA 90 bp CAGACGCTAGGTTGCCTGACATGGCCTGTGCTTTTAGTAACACCCCTTCCCATCCCTAAGGTCCCTCAATaGGTGAATGATAAACAAAAT +
Preference number: 2 (lower is better)
Translates to: QTLGCLTWPVLLVTPLPIPKVPQ*VNDKQN
Trigger: ATTTTGTTTATCATTCACGCATTGAGGGACCTTAGG...GATGGGAAGGGGTGTTACTAAAAGCACAGGCCATGTCAGGCAACCTAGCGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 90 bp TCAATAGGTTTTGGTACAGTAAATATTTCCTATGCTGCCTTGACATaGCCAAAGCCAAACTCCTCAGAATTTGCCAGGCACAGGCCAGCG +
Preference number: 2 (lower is better)
Translates to: SIGFGTVNISYAALT*PKPNSSEFARHRPA
Trigger: CGCTGGCCTGTGCCTGGCAAATTCTGAGGAGTTTGGCTTTGGCAATGTCAAGGCAGCATAGGAAATATTTACTGTACCAAAACCTATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR GCA 90 bp TGCCGAAGACAAATCTACTTTTGTTTGCTTACCCAACTGGCAGATATATCTATCCGGGCTGTAATTCTTTaGTGTAGGAGGCTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: CRRQIYFCLLTQLADISIRAVIL*CRRLAW
Trigger: CCAGGCCAGCCTCCTACAGCAAAGAATTACAGCCCG...GATAGATATATCTGCCAGTTGGGTAAGCAAACAAAAGTAGATTTGTCTTCGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CCA 90 bp CCAATCTTATTTGCAAATCTGATGAAATCCATGCTCCTTCTCCCTAGGAAAGAGCCTAGACTCTCTTTTTaGGGGGCTGCCCTCAGGATA +
Preference number: 2 (lower is better)
Translates to: PILFANLMKSMLLLPRKEPRLSF*GAALRI
Trigger: TATCCTGAGGGCAGCCCCCCAAAAAGAGAGTCTAGG...CTCTTTCCTAGGGAGAAGGAGCATGGATTTCATCAGATTTGCAAATAAGATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CCA 90 bp CCAATCTTATTTGCAAATCTGATGAAATCCATGCTCCTTCTCCCTAGGAAAGAGAGGGAAGCCCTGGGGTaGTTGAACCAACAAAGGGAT +
Preference number: 2 (lower is better)
Translates to: PILFANLMKSMLLLPRKEREALG*LNQQRD
Trigger: ATCCCTTTGTTGGTTCAACCACCCCAGGGCTTCCCT...CTCTTTCCTAGGGAGAAGGAGCATGGATTTCATCAGATTTGCAAATAAGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 90 bp CCTAGCAGTTCATGGGGAAACGTTGCTATGCCAACTAGCTGGCTGTaGCTAATCATAATCTATGAATGTGCAGTACAACCATCTGACAAG +
Preference number: 2 (lower is better)
Translates to: PSSSWGNVAMPTSWL*LIIIYECAVQPSDK
Trigger: CTTGTCAGATGGTTGTACTGCACATTCATAGATTATGATTAGCAACAGCCAGCTAGTTGGCATAGCAACGTTTCCCCATGAACTGCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR TCA 90 bp TGTCCTCTCTCTGTCATGTTCCTGATGCTCAAAGCTAATGACATTGTCCCAAAACGCCAGGATCAACATTaGCTTGTCTCTTCTCCTTCA +
Preference number: 2 (lower is better)
Translates to: CPLSVMFLMLKANDIVPKRQDQH*LVSSPS
Trigger: TGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCG...TTTTGGGACAATGTCATTAGCTTTGAGCATCAGGAACATGACAGAGAGAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR TCA 90 bp AGTCTGAGGCTGTCTCCAGCTCCAACAATGGATGTTTCCGGATCTGTCACCTTAAATGTAAGCCAAACATaGTACATTTGTGGGCCAAAT +
Preference number: 2 (lower is better)
Translates to: SLRLSPAPTMDVSGSVTLNVSQT*YICGPN
Trigger: ATTTGGCCCACAAATGTATCATGTTTGGCTTACATT...TAAGGTGACAGATCCGGAAACATCCATTGTTGGAGCTGGAGACAGCCTCAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR GCA 90 bp TTATTGTGCATTTGGGATTCAGCGGGAAAGTACACAATTTCTAAACTGATGTCTCAAGGAGCCACCATGTaGCCTTCCAAATGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: LLCIWDSAGKYTISKLMSQGATM*PSKCWG
Trigger: ACCCCAGCATTTGGAAGGGCACATGGTGGCTCCTTG...AGACATCAGTTTAGAAATTGTGTACTTTCCCGCTGAATCCCAAATGCACAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR CCA 90 bp TGTCCTCTCTCTGTCATGTTCCTGATGCTCAAAGCTAATGACATTGTCCCAAAATCATGCCACATTGCCTaGCATCCAGTGGATATCAAC +
Preference number: 2 (lower is better)
Translates to: CPLSVMFLMLKANDIVPKSCHIA*HPVDIN
Trigger: GTTGATATCCACTGGATGCCAGGCAATGTGGCATGA...TTTTGGGACAATGTCATTAGCTTTGAGCATCAGGAACATGACAGAGAGAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR CAA 90 bp GCTCTGACAATGAACACAAAATCCCAAAGCCGAAGGCAAAACCACTaGCCACTAAATGAGGGCTCTGATTGCTACCAATTTCTTAAAGCA +
Preference number: 2 (lower is better)
Translates to: ALTMNTKSQSRRQNH*PLNEGSDCYQFLKA
Trigger: TGCTTTAAGAAATTGGTAGCAATCAGAGCCCTCATTTAGTGGCAAGTGGTTTTGCCTTCGGCTTTGGGATTTTGTGTTCATTGTCAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR CAA 90 bp CCCAGGTTGGTATCATACAGAGTAGAAGTATTCCCTATTAGTGACTaGAGACAGGAAGATGGTTGCTTGGCTTATAATTTGGCTCACTGG +
Preference number: 2 (lower is better)
Translates to: PRLVSYRVEVFPISD*RQEDGCLAYNLAHW
Trigger: CCAGTGAGCCAAATTATAAGCCAAGCAACCATCTTCCTGTCTCAAGTCACTAATAGGGAATACTTCTACTCTGTATGATACCAACCTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 90 bp AATATGGGCTTCTTACAGTCAACAGCCATCTCTTGGGTCCCCAGGTaGGTATCATACAGAGTAGAAGTATTCCCTATTAGTGACTTGAGA +
Preference number: 2 (lower is better)
Translates to: NMGFLQSTAISWVPR*VSYRVEVFPISDLR
Trigger: TCTCAAGTCACTAATAGGGAATACTTCTACTCTGTATGATACCAACCTGGGGACCCAAGAGATGGCTGTTGACTGTAAGAAGCCCATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 90 bp TCACATGGCATTAAATATGGGCTTCTTACAGTCAACAGCCATCTCTaGGGTCCCCAGGTTGGTATCATACAGAGTAGAAGTATTCCCTAT +
Preference number: 2 (lower is better)
Translates to: SHGIKYGLLTVNSHL*GPQVGIIQSRSIPY
Trigger: ATAGGGAATACTTCTACTCTGTATGATACCAACCTGGGGACCCAAGAGATGGCTGTTGACTGTAAGAAGCCCATATTTAATGCCATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR GCA 90 bp TTATTGTGCATTTGGGATTCAGCGGGAAAGTACACAATTTCTAAACTGATGTCTTCACCAAACCAGTGCTaGAGGTCACTTCCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: LLCIWDSAGKYTISKLMSSPNQC*RSLPAW
Trigger: CCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGA...AGACATCAGTTTAGAAATTGTGTACTTTCCCGCTGAATCCCAAATGCACAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR CAA 90 bp CATAGGAGACCTTGTAGATTCATGCAACCGCAAGGTGTACAGTTATaGTGCATTTGGGATTCAGCGGGAAAGTACACAATTTCTAAACTG +
Preference number: 2 (lower is better)
Translates to: HRRPCRFMQPQGVQL*CIWDSAGKYTISKL
Trigger: CAGTTTAGAAATTGTGTACTTTCCCGCTGAATCCCAAATGCACAATAACTGTACACCTTGCGGTTGCATGAATCTACAAGGTCTCCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR CAA 90 bp GAATGCAGTTTGCCATTGGTGCACATGCCGAAGACAAATCTACTTTaGTTTGCTTACCCAACTGGCAGATATATCTATCACAGAATATCT +
Preference number: 2 (lower is better)
Translates to: ECSLPLVHMPKTNLL*FAYPTGRYIYHRIS
Trigger: AGATATTCTGTGATAGATATATCTGCCAGTTGGGTAAGCAAACAAAAGTAGATTTGTCTTCGGCATGTGCACCAATGGCAAACTGCATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 90 bp AGGGAAATGAGGAGTGAATCTTTCATGAATATGGTGTTTCTAATTTaGCAAGATGAAAAGGTTCTGGAGATGGATGATGGTGATGGTTGC +
Preference number: 2 (lower is better)
Translates to: REMRSESFMNMVFLI*QDEKVLEMDDGDGC
Trigger: GCAACCATCACCATCATCCATCTCCAGAACCTTTTCATCTTGCAAAATTAGAAACACCATATTCATGAAAGATTCACTCCTCATTTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR TCA 90 bp TGCCGAAGACAAATCTACTTTTGTTTGCTTACCCAACTGGCAGATATATCTATCGGAATTAGACTCTATTaGATGTCTACTATGTGCAGA +
Preference number: 2 (lower is better)
Translates to: CRRQIYFCLLTQLADISIGIRLY*MSTMCR
Trigger: TCTGCACATAGTAGACATTCAATAGAGTCTAATTCC...GATAGATATATCTGCCAGTTGGGTAAGCAAACAAAAGTAGATTTGTCTTCGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR GCA 90 bp TGCCGAAGACAAATCTACTTTTGTTTGCTTACCCAACTGGCAGATATATCTATCAGTAACAAGAGAAAATaGCGGCCTATTTTACACAAA +
Preference number: 2 (lower is better)
Translates to: CRRQIYFCLLTQLADISISNKRK*RPILHK
Trigger: TTTGTGTAAAATAGGCCGGCATTTTCTCTTGTTACT...GATAGATATATCTGCCAGTTGGGTAAGCAAACAAAAGTAGATTTGTCTTCGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CAA 90 bp GAGGCAGGTCCTGCTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGGGACAGGTAGCGGCTTaGGCCTTTCCCTTAAGCCCC +
Preference number: 3 (lower is better)
Translates to: EAGPAEELPEGRCRVLSLGQVAA*AFPLSP
Trigger: GGGGCTTAAGGGAAAGGCCAAAGCCGCTACCTGTCC...CAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAGCAGGACCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR GCA 72 bp GATGGGTGGCAAGGAGCCACCATGTGCCCTTCCAAATaGTGGGGTCTACAGACCAGGCGAGGGGAGTCCGCC +
Preference number: 3 (lower is better)
Translates to: DGWQGATMCPSK*WGLQTRRGESA
Trigger: GGCGGACTCCCCTCGCCTGGTCTGTAGACCCCAGCATTTGGAAGGGCACATGGTGGCTCCTTGCCACCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR CCA 72 bp GGGTGGCAAGGAGCCACCATGTGCCCTTCCAAATGCTaGGGTCTACAGACCAGGCGAGGGGAGTCCGCCATC +
Preference number: 3 (lower is better)
Translates to: GWQGATMCPSKC*GLQTRRGESAI
Trigger: GATGGCGGACTCCCCTCGCCTGGTCTGTAGACCCCAGCATTTGGAAGGGCACATGGTGGCTCCTTGCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR CAA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCGGACAGGTAGCGGCTTaGGCCTTTCCCTTAAGCCCC +
Preference number: 3 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSGQVAA*AFPLSP
Trigger: GGGGCTTAAGGGAAAGGCCAAAGCCGCTACCTGTCC...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR TCA 72 bp CTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGCATCTaGTGGGTGGCAAGGAGCCACCATGTGCCCTTCCAA +
Preference number: 3 (lower is better)
Translates to: LGCQSRSCPWSI*WVARSHHVPFQ
Trigger: TTGGAAGGGCACATGGTGGCTCCTTGCCACCCATCAGATGCTCCAGGGGCAGGACCTGCTCTGGCAACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR GCA 72 bp GGGCAGCCTGAGACCAGCTCCTGTGTGCCAAGTTCCTaGCTGAACCTACTGGGTTGCCAGAGCAGGTCCTGC +
Preference number: 3 (lower is better)
Translates to: GQPETSSCVPSS*LNLLGCQSRSC
Trigger: GCAGGACCTGCTCTGGCAACCCAGTAGGTTCAGGCAGGAACTTGGCACACAGGAGCTGGTCTCAGGCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 72 bp TCTCCAGAGGCCTCAGGGTCACTCGTAGTCATTCCCTaGCTGTGGGGCAGCCTGAGACCAGCTCCTGTGTGC +
Preference number: 3 (lower is better)
Translates to: SPEASGSLVVIP*LWGSLRPAPVC
Trigger: GCACACAGGAGCTGGTCTCAGGCTGCCCCACAGGCAGGGAATGACTACGAGTGACCCTGAGGCCTCTGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 72 bp GCCAGAGCAGGTCCTGCCCCTGGAGCATCTGATGGGTaGCAAGGAGCCACCATGTGCCCTTCCAAATGCTGG +
Preference number: 3 (lower is better)
Translates to: ARAGPAPGASDG*QGATMCPSKCW
Trigger: CCAGCATTTGGAAGGGCACATGGTGGCTCCTTGCCACCCATCAGATGCTCCAGGGGCAGGACCTGCTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR TCA 72 bp CCAGCACCGACCACTGCCCCAGGTTCTGCGGAGATCTaGGACACCCATGGCCAACTCCAACCACCAGATCTG +
Preference number: 3 (lower is better)
Translates to: PAPTTAPGSAEI*DTHGQLQPPDL
Trigger: CAGATCTGGTGGTTGGAGTTGGCCATGGGTGTCTCAGATCTCCGCAGAACCTGGGGCAGTGGTCGGTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 72 bp CAGTGGGGGAGGGAGCGAGCTGGCTTCATTCACCTCTaGCTGTGGCCAGGAAGATGGAAGCCCGATGCTGTC +
Preference number: 3 (lower is better)
Translates to: QWGRERAGFIHL*LWPGRWKPDAV
Trigger: GACAGCATCGGGCTTCCATCTTCCTGGCCACAGTCAGAGGTGAATGAAGCCAGCTCGCTCCCTCCCCCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 72 bp TGTTGCTCACCCAGCACCGACCACTGCCCCAGGTTCTaGGGAGATCTGAGACACCCATGGCCAACTCCAACC +
Preference number: 3 (lower is better)
Translates to: CCSPSTDHCPRF*GDLRHPWPTPT
Trigger: GGTTGGAGTTGGCCATGGGTGTCTCAGATCTCCGCAGAACCTGGGGCAGTGGTCGGTGCTGGGTGAGCAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 72 bp GAGGCCTCAGGGTCACTCGTAGTCATTCCCTGCCTGTaGGGCAGCCTGAGACCAGCTCCTGTGTGCCAAGTT +
Preference number: 3 (lower is better)
Translates to: EASGSLVVIPCL*GSLRPAPVCQV
Trigger: AACTTGGCACACAGGAGCTGGTCTCAGGCTGCCCCACAGGCAGGGAATGACTACGAGTGACCCTGAGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 72 bp ACACCTGGCCCACAGGGTGTCCTGTGTGCAGTGGGATaGACTGTTCACCCCAGGAGTGCTCCATTGGCCTTG +
Preference number: 3 (lower is better)
Translates to: TPGPQGVLCAVG*TVHPRSAPLAL
Trigger: CAAGGCCAATGGAGCACTCCTGGGGTGAACAGTCCATCCCACTGCACACAGGACACCCTGTGGGCCAGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CAA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCCGAAGGCAAAACCACTaGCCACTAAATGAGGGCTCT +
Preference number: 3 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSRRQNH*PLNEGS
Trigger: AGAGCCCTCATTTAGTGGCAAGTGGTTTTGCCTTCG...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CAA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCCCATGGCTGATCTTGTaGGGAGCTATGAGATCCGTC +
Preference number: 3 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSPWLIL*GAMRSV
Trigger: GACGGATCTCATAGCTCCCAACAAGATCAGCCATGG...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CAA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGAGGAGTATCTCTCCCATaGTCCTGTGAGGTCCCCGGC +
Preference number: 3 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGGVSLP*SCEVPG
Trigger: GCCGGGGACCTCACAGGACAATGGGAGAGATACTCC...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CAA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCTGCCCAGCCATTCCTTaGTGGCTGACTTCCAGTTGT +
Preference number: 3 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSCPAIP*WLTSSC
Trigger: ACAACTGGAAGTCAGCCACAAAGGAATGGCTGGGCA...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR TCA 72 bp CCCCTTCCCAAAGAGAGAGGTGACATCTCTGGTGGGTaGGCCTGGGTCAGGGTCTGGTGTGTGTCGTCCAAG +
Preference number: 3 (lower is better)
Translates to: PLPKERGDISGG*AWVRVWCVSSK
Trigger: CTTGGACGACACACACCAGACCCTGACCCAGGCTCACCCACCAGAGATGTCACCTCTCTCTTTGGGAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CAA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCTATGCTGCCTTGACATaGCCAAAGCCAAACTCCTCA +
Preference number: 3 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSYAALT*PKPNSS
Trigger: TGAGGAGTTTGGCTTTGGCAATGTCAAGGCAGCATA...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CAA 90 bp CTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGGACCACTCCCGTGTATGCTGCCTTGACATaGCCAAAGCCAAACTCCTCA +
Preference number: 3 (lower is better)
Translates to: LKSFRRGGVGSCRWTTPVYAALT*PKPNSS
Trigger: TGAGGAGTTTGGCTTTGGCAATGTCAAGGCAGCATA...CACGGGAGTGGTCCAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR CAA 90 bp CACCATGTGCCCTTCCAAATGCTGGGGTCTACAGACCAGGCGAGGGGAGTCCGCTGCCCAGCCATTCCTTaGTGGCTGACTTCCAGTTGT +
Preference number: 3 (lower is better)
Translates to: HHVPFQMLGSTDQARGVRCPAIP*WLTSSC
Trigger: ACAACTGGAAGTCAGCCACAAAGGAATGGCTGGGCA...GCGGACTCCCCTCGCCTGGTCTGTAGACCCCAGCATTTGGAAGGGCACATGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR CAA 90 bp CTAGACCCAGACGGCAATTCATGGCCCGGGAGAATAAGTGGCTCTGCCTTGGAAGGAGTATCTCTCCCATaGTCCTGTGAGGTCCCCGGC +
Preference number: 3 (lower is better)
Translates to: LDPDGNSWPGRISGSALEGVSLP*SCEVPG
Trigger: GCCGGGGACCTCACAGGACAATGGGAGAGATACTCC...TTCCAAGGCAGAGCCACTTATTCTCCCGGGCCATGAATTGCCGTCTGGGTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR CAA 90 bp GCGAGGGGAGTCCGCCATCCTGTACTGTGCCCCAGGGAGCCACGGCACAAAGCTTTTATTAGGGAATCGTaGGGTTACGCTGCAAAGGTC +
Preference number: 3 (lower is better)
Translates to: ARGVRHPVLCPREPRHKAFIRES*GYAAKV
Trigger: GACCTTTGCAGCGTAACCCAACGATTCCCTAATAAA...AGCTTTGTGCCGTGGCTCCCTGGGGCACAGTACAGGATGGCGGACTCCCCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR CAA 90 bp TTGTTGCAGCCCATTGGTCTGCAGAGCGATCAAACCACACTACCTCAGCGTGTCCCTGAACCTACTGGGTaGCCAGAGCAGGTCCTGCCC +
Preference number: 3 (lower is better)
Translates to: LLQPIGLQSDQTTLPQRVPEPTG*PEQVLP
Trigger: GGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCAGG...GACACGCTGAGGTAGTGTGGTTTGATCGCTCTGCAGACCAATGGGCTGCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 72 bp CACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTaGCTTCCAGTTGTCCCAAGCCAAGTAGAACGGACC +
Preference number: 3 (lower is better)
Translates to: HPPDTAQPFLCG*LPVVPSQVERT
Trigger: GGTCCGTTCTACTTGGCTTGGGACAACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR TCA 72 bp GGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTaGCAAGAGCATGCTTTGCCCACTTCCCCTCCAGGG +
Preference number: 3 (lower is better)
Translates to: GWERCSDCLQLA*QEHALPTSPPG
Trigger: CCCTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR TCA 72 bp ACAGCTGGATTTTCACTGCATCTTCCTGGGCGATGCTaGGATTTCACAGGTCCCTGTCAGGCCCCTGGCCGC +
Preference number: 3 (lower is better)
Translates to: TAGFSLHLPGRC*DFTGPCQAPGR
Trigger: GCGGCCAGGGGCCTGACAGGGACCTGTGAAATCTCAGCATCGCCCAGGAAGATGCAGTGAAAATCCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 72 bp TACAGCAGCACCCTTCCCACCTCACCCACCGGACACTaGCCAGCCATTCCTTTGTGGCTGACTTCCAGTTGT +
Preference number: 3 (lower is better)
Translates to: YSSTLPTSPTGH*PAIPLWLTSSC
Trigger: ACAACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGGAAGGGTGCTGCTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR CCA 72 bp TGTTTTCTGCTGCAGAGCCAGGCTGGACCGTCTGGCTaGTCTCCAGAGGCCTCAGGGTCACTCGTAGTCATT +
Preference number: 3 (lower is better)
Translates to: CFLLQSQAGPSG*SPEASGSLVVI
Trigger: AATGACTACGAGTGACCCTGAGGCCTCTGGAGACCAGCCAGACGGTCCAGCCTGGCTCTGCAGCAGAAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CAA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGCAAACTCCTCAGAATTaGCCAGGCACAGGCCAGCGT +
Preference number: 3 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQQTPQN*PGTGQR
Trigger: ACGCTGGCCTGTGCCTGGCAAATTCTGAGGAGTTTG...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CAA 90 bp GGGAGGGTTGAGCCCGACCCACAACTGGTCAGGAATCCAGTGAACATCTCCACGCCATGGCTGATCTTGTaGGGAGCTATGAGATCCGTC +
Preference number: 3 (lower is better)
Translates to: GRVEPDPQLVRNPVNISTPWLIL*GAMRSV
Trigger: GACGGATCTCATAGCTCCCAACAAGATCAGCCATGG...CGTGGAGATGTTCACTGGATTCCTGACCAGTTGTGGGTCGGGCTCAACCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR CAA 90 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTGACTTCCAGTTCTCCATGGCTGATCTaGTTGGGAGCTATGAGATCC +
Preference number: 3 (lower is better)
Translates to: PTSPTGHCPAIPLWLTSSSPWLI*LGAMRS
Trigger: GGATCTCATAGCTCCCAACAAGATCAGCCATGGAGA...ACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CAA 90 bp CAGAGGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGCCCAGCCATTCCTTaGTGGCTGACTTCCAGTTGT +
Preference number: 3 (lower is better)
Translates to: QREAEGGSPNQCCRSLPACPAIP*WLTSSC
Trigger: ACAACTGGAAGTCAGCCACAAAGGAATGGCTGGGCA...AGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR TCA 72 bp CAACTGGTCAGGAATCCAGTGAACATCTCCACGGACTaGTGGTTTCACTGCAGGCAGGCCCCGGAGGATAGC +
Preference number: 3 (lower is better)
Translates to: QLVRNPVNISTD*WFHCRQAPEDS
Trigger: GCTATCCTCCGGGGCCTGCCTGCAGTGAAACCATCAGTCCGTGGAGATGTTCACTGGATTCCTGACCAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR TCA 72 bp TCAGAAGAGGCCCTTAATGAGTACTCATGGAGCGACTaGGCAGACTTACGCGGAAGCCCACCCACCAGGGCA +
Preference number: 3 (lower is better)
Translates to: SEEALNEYSWSD*ADLRGSPPTRA
Trigger: TGCCCTGGTGGGTGGGCTTCCGCGTAAGTCTGCTCAGTCGCTCCATGAGTACTCATTAAGGGCCTCTTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 72 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTaGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTC +
Preference number: 3 (lower is better)
Translates to: VLDGNDAVTACS*LDKSMLCPLPL
Trigger: GAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR CCA 72 bp AAATTGTTTTCTGCTGCAGAGCCAGGCTGGACCGTCTaGCTGGTCTCCAGAGGCCTCAGGGTCACTCGTAGT +
Preference number: 3 (lower is better)
Translates to: KLFSAAEPGWTV*LVSRGLRVTRS
Trigger: ACTACGAGTGACCCTGAGGCCTCTGGAGACCAGCCAGACGGTCCAGCCTGGCTCTGCAGCAGAAAACAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 72 bp AAAGGAGCTGAAATGAGGCTGCATGCCTGGGCACTTTaGGGTGCTGTGGTCAGTTGGGCGCAACTCATGGAC +
Preference number: 3 (lower is better)
Translates to: KGAEMRLHAWAL*GAVVSWAQLMD
Trigger: GTCCATGAGTTGCGCCCAACTGACCACAGCACCCCAAAGTGCCCAGGCATGCAGCCTCATTTCAGCTCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CAA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGCGAAGGCAAAACCACTaGCCACTAAATGAGGGCTCT +
Preference number: 3 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLRRQNH*PLNEGS
Trigger: AGAGCCCTCATTTAGTGGCAAGTGGTTTTGCCTTCG...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CAA 90 bp TTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTGGAAGTATGCTGCCTTGACATaGCCAAAGCCAAACTCCTCA +
Preference number: 3 (lower is better)
Translates to: FSWVAHLIRGTSLCSRWKYAALT*PKPNSS
Trigger: TGAGGAGTTTGGCTTTGGCAATGTCAAGGCAGCATA...CTTCCACCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CAA 90 bp TACCAAAGTGAACCTACTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGCATCTGCCATGGCTGATCTTGTaGGGAGCTATGAGATCCGTC +
Preference number: 3 (lower is better)
Translates to: YQSEPTGLPEQVLPLEHLPWLIL*GAMRSV
Trigger: GACGGATCTCATAGCTCCCAACAAGATCAGCCATGG...CAGATGCTCCAGGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCACTTTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324058.9
3UTR-3UTR CAA 90 bp CACCATGTGCCCTTCCAAATGCTGGGGTCTACAGACCAGGCGAGGGGAGTCCGCGCTGCAAAGGTCGTCTaGGCTTGCTTTAATGGATTT +
Preference number: 3 (lower is better)
Translates to: HHVPFQMLGSTDQARGVRAAKVV*ACFNGF
Trigger: AAATCCATTAAAGCAAGCCAAGACGACCTTTGCAGC...GCGGACTCCCCTCGCCTGGTCTGTAGACCCCAGCATTTGGAAGGGCACATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR TCA 72 bp GGTGGAAGGAAGGGGTGCTGGATGGGAACGATGCAGTaGCTGCTTGCAGCTGGCTTGACAAGAGCATGCTTT +
Preference number: 3 (lower is better)
Translates to: GGRKGCWMGTMQ*LLAAGLTRACF
Trigger: AAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCACCCCTTCCTTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR TCA 72 bp CTTCCTCCCTGGGCCTCTGCATTTTCACCCATAACATaGTGGGTGCTGAGCAGACGAGGTGTCACCAAGCCA +
Preference number: 3 (lower is better)
Translates to: LPPWASAFSPIT*WVLSRRGVTKP
Trigger: TGGCTTGGTGACACCTCGTCTGCTCAGCACCCATCATGTTATGGGTGAAAATGCAGAGGCCCAGGGAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 72 bp GCACATCCACAGTTCAGTTTTATGCCTCAGGGCCTTTaGACATGCGTTCCCTCGTACAGCAGCACCCTTCCC +
Preference number: 3 (lower is better)
Translates to: AHPQFSFMPQGL*TCVPSYSSTLP
Trigger: GGGAAGGGTGCTGCTGTACGAGGGAACGCATGTGCAAAGGCCCTGAGGCATAAAACTGAACTGTGGATGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR CCA 72 bp AGCCGACCCAAAGTGCTAGACCCAGACGGCAATTCATaGCCCGGGAGAATAAGTGGCTCTGCCTTGGAAACA +
Preference number: 3 (lower is better)
Translates to: SRPKVLDPDGNS*PGRISGSALET
Trigger: TGTTTCCAAGGCAGAGCCACTTATTCTCCCGGGCCATGAATTGCCGTCTGGGTCTAGCACTTTGGGTCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR CCA 72 bp TCCCCGCTCAACAGCTGGATTTTCACTGCATCTTCCTaGGCGATGCTGAGATTTCACAGGTCCCTGTCAGGC +
Preference number: 3 (lower is better)
Translates to: SPLNSWIFTASS*AMLRFHRSLSG
Trigger: GCCTGACAGGGACCTGTGAAATCTCAGCATCGCCCAGGAAGATGCAGTGAAAATCCAGCTGTTGAGCGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 72 bp CCCACTGTCTCACAGCAGCCAGGGCAAGAAAACATGTaGCTCACTGACGTTTCCCCGCTCAACAGCTGGATT +
Preference number: 3 (lower is better)
Translates to: PTVSQQPGQENM*LTDVSPLNSWI
Trigger: AATCCAGCTGTTGAGCGGGGAAACGTCAGTGAGCCACATGTTTTCTTGCCCTGGCTGCTGTGAGACAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CAA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGTCTCCATGGCTGATCTaGTTGGGAGCTATGAGATCC +
Preference number: 3 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQSPWLI*LGAMRS
Trigger: GGATCTCATAGCTCCCAACAAGATCAGCCATGGAGA...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CAA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGCTCCTTCATGCCACATaGCCTGGCATCCAGTGGATA +
Preference number: 3 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGLLHAT*PGIQWI
Trigger: TATCCACTGGATGCCAGGCAATGTGGCATGAAGGAG...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CAA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGAGGATCAACATTGACTaGTCTCTTCTCCTTCATGCC +
Preference number: 3 (lower is better)
Translates to: PQDRSALLLGRPPDSGHERINID*SLLLHA
Trigger: GGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCT...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CAA 90 bp CAGACGCTAGGTTGCCTGACATGGCCTGTGCTTTTAGTAACACCCCTTCCCATCCAGGGAAGTCCGCCATaGTTGTTTGCTGACAGTCCG +
Preference number: 3 (lower is better)
Translates to: QTLGCLTWPVLLVTPLPIQGSPP*LFADSP
Trigger: CGGACTGTCAGCAAACAACAATGGCGGACTTCCCTG...GATGGGAAGGGGTGTTACTAAAAGCACAGGCCATGTCAGGCAACCTAGCGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 72 bp CATGATACATTTGTGGGCCAAATCTGGCCCAAGGGCTaGCAGTACCCGCTGTGGACTGGAAACTCTCTAAGG +
Preference number: 3 (lower is better)
Translates to: HDTFVGQIWPKG*QYPLWTGNSLR
Trigger: CCTTAGAGAGTTTCCAGTCCACAGCGGGTACTGGCAGCCCTTGGGCCAGATTTGGCCCACAAATGTATCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 72 bp AATCTGGCCCAAGGGCTGCCAGTACCCGCTGTGGACTaGAAACTCTCTAAGGTCTGTAATGTGATATGGGGC +
Preference number: 3 (lower is better)
Translates to: NLAQGLPVPAVD*KLSKVCNVIWG
Trigger: GCCCCATATCACATTACAGACCTTAGAGAGTTTCCAGTCCACAGCGGGTACTGGCAGCCCTTGGGCCAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 72 bp CACAGGCTGGCAGGATCACCATGCTGTCTAAAGGTCTaGGGCCCAAGACAGGTATATTCTCTGGTACTGCCA +
Preference number: 3 (lower is better)
Translates to: HRLAGSPCCLKV*GPRQVYSLVLP
Trigger: TGGCAGTACCAGAGAATATACCTGTCTTGGGCCCCAGACCTTTAGACAGCATGGTGATCCTGCCAGCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 72 bp GGGGGAGTGGAAAGAGACTATGTGACTGTATTCCCATaGTTCTCCCCCAGCTGCCCATTAGAATCACTGGGG +
Preference number: 3 (lower is better)
Translates to: GGVERDYVTVFP*FSPSCPLESLG
Trigger: CCCCAGTGATTCTAATGGGCAGCTGGGGGAGAACCATGGGAATACAGTCACATAGTCTCTTTCCACTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CAA 90 bp AATGGAGCGATCATTACAAATCCTGAAAACCCAGAGGGAGGGTTGAGCCCGACCCAAACTCCTCAGAATTaGCCAGGCACAGGCCAGCGT +
Preference number: 3 (lower is better)
Translates to: NGAIITNPENPEGGLSPTQTPQN*PGTGQR
Trigger: ACGCTGGCCTGTGCCTGGCAAATTCTGAGGAGTTTG...GGTCGGGCTCAACCCTCCCTCTGGGTTTTCAGGATTTGTAATGATCGCTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR CAA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGAAGGATCAACATTGACTaGTCTCTTCTCCTTCATGCC +
Preference number: 3 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGRINID*SLLLHA
Trigger: GGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCT...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CAA 90 bp CTAGACCCAGACGGCAATTCATGGCCCGGGAGAATAAGTGGCTCTGCCTTGGAACAGGTCACTTCCTGCTaGGAAATTATAGGGAAGCCC +
Preference number: 3 (lower is better)
Translates to: LDPDGNSWPGRISGSALEQVTSC*EIIGKP
Trigger: GGGCTTCCCTATAATTTCCAAGCAGGAAGTGACCTG...TTCCAAGGCAGAGCCACTTATTCTCCCGGGCCATGAATTGCCGTCTGGGTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR-3UTR CAA 90 bp GGGAGGGTTGAGCCCGACCCACAACTGGTCAGGAATCCAGTGAACATCTCCACGTTTATTAGGGAATCGTaGGGTTACGCTGCAAAGGTC +
Preference number: 3 (lower is better)
Translates to: GRVEPDPQLVRNPVNISTFIRES*GYAAKV
Trigger: GACCTTTGCAGCGTAACCCAACGATTCCCTAATAAA...CGTGGAGATGTTCACTGGATTCCTGACCAGTTGTGGGTCGGGCTCAACCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR GCA 72 bp TCCAAGCACAGCAACTGGGCCGTGATGCTCTTTAACTaGAGAGCAAAAGGAGCTGAAATGAGGCTGCATGCC +
Preference number: 3 (lower is better)
Translates to: SKHSNWAVMLFN*RAKGAEMRLHA
Trigger: GGCATGCAGCCTCATTTCAGCTCCTTTTGCTCTGCAGTTAAAGAGCATCACGGCCCAGTTGCTGTGCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 72 bp ATGGAAGAGTTTGCAGATCAGAGAGATGGGCTCACCTaGCCAGTGCCCTCAGTGGCTAATGCGTCAAGCTTA +
Preference number: 3 (lower is better)
Translates to: MEEFADQRDGLT*PVPSVANASSL
Trigger: TAAGCTTGACGCATTAGCCACTGAGGGCACTGGGCAGGTGAGCCCATCTCTCTGATCTGCAAACTCTTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 72 bp GAGCGATCAAACCACACTACCTCAGCGTGTCCCCACTaGCGCCACACCTCCGACATACCTATTTTAAGAACA +
Preference number: 3 (lower is better)
Translates to: ERSNHTTSACPH*RHTSDIPILRT
Trigger: TGTTCTTAAAATAGGTATGTCGGAGGTGTGGCGGCAGTGGGGACACGCTGAGGTAGTGTGGTTTGATCGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 72 bp CAGCAGAGCCTGCCCCATGGCACGGTTGGAGAATACTaGATAATGACATCCGAACCACGTTCAGTCCCATTT +
Preference number: 3 (lower is better)
Translates to: QQSLPHGTVGEY*IMTSEPRSVPF
Trigger: AAATGGGACTGAACGTGGTTCGGATGTCATTATGCAGTATTCTCCAACCGTGCCATGGGGCAGGCTCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 72 bp AACATGTGGCTCACTGACGTTTCCCCGCTCAACAGCTaGATTTTCACTGCATCTTCCTGGGCGATGCTGAGA +
Preference number: 3 (lower is better)
Translates to: NMWLTDVSPLNS*IFTASSWAMLR
Trigger: TCTCAGCATCGCCCAGGAAGATGCAGTGAAAATCCAGCTGTTGAGCGGGGAAACGTCAGTGAGCCACATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CAA 90 bp ACTTCTTCCCCAGCAGCATCCAGCCAGACACTCGCACAGCAGTCACTAAATGCATCTCCATGGCTGATCTaGTTGGGAGCTATGAGATCC +
Preference number: 3 (lower is better)
Translates to: TSSPAASSQTLAQQSLNASPWLI*LGAMRS
Trigger: GGATCTCATAGCTCCCAACAAGATCAGCCATGGAGA...TGCATTTAGTGACTGCTGTGCGAGTGTCTGGCTGGATGCTGCTGGGGAAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR-3UTR CAA 90 bp ACGCTAGGTTGCCTGACATGGCCTGTGCTTTTAGTAACACCCCTTCCCATCCCACAGGTCACTTCCTGCTaGGAAATTATAGGGAAGCCC +
Preference number: 3 (lower is better)
Translates to: TLGCLTWPVLLVTPLPIPQVTSC*EIIGKP
Trigger: GGGCTTCCCTATAATTTCCAAGCAGGAAGTGACCTG...TGGGATGGGAAGGGGTGTTACTAAAAGCACAGGCCATGTCAGGCAACCTAGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CAA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGAGGATCAACATTGACTaGTCTCTTCTCCTTCATGCC +
Preference number: 3 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMRINID*SLLLHA
Trigger: GGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCT...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR TCA 72 bp CGATCATTACAAATCCTGAAAACCCAGAGGGAGGGTTaGGCCCGACCCACAACTGGTCAGGAATCCAGTGAA +
Preference number: 3 (lower is better)
Translates to: RSLQILKTQREG*ARPTTGQESSE
Trigger: TTCACTGGATTCCTGACCAGTTGTGGGTCGGGCTCAACCCTCCCTCTGGGTTTTCAGGATTTGTAATGATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR GCA 72 bp CTTATCACTCTGCCAATGACACTCATGCCTCTTCCCTaGCTCACCTGCAAAAGCTGGTTGTGCAAACCCGAA +
Preference number: 3 (lower is better)
Translates to: LITLPMTLMPLP*LTCKSWLCKPE
Trigger: TTCGGGTTTGCACAACCAGCTTTTGCAGGTGAGGCAGGGAAGAGGCATGAGTGTCATTGGCAGAGTGATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 72 bp CACTTCCTGCTTGGAAATTATAGGGAAGCCCTGGGGTaGTTGAACCAACAAAGGGATCACCGCAGTGGTTTC +
Preference number: 3 (lower is better)
Translates to: HFLLGNYREALG*LNQQRDHRSGF
Trigger: GAAACCACTGCGGTGATCCCTTTGTTGGTTCAACCACCCCAGGGCTTCCCTATAATTTCCAAGCAGGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR CCA 72 bp CACTTTGGGGTGCTGTGGTCAGTTGGGCGCAACTCATaGACACAAGTTGAGAGAAGAAGAGCTCTTCGCTTA +
Preference number: 3 (lower is better)
Translates to: HFGVLWSVGRNS*TQVERRRALRL
Trigger: TAAGCGAAGAGCTCTTCTTCTCTCAACTTGTGTCCATGAGTTGCGCCCAACTGACCACAGCACCCCAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CAA 90 bp ATCATTACAAATCCTGAAAACCCAGAGGGAGGGTTGAGCCCGACCCACAACTGGTCTTGGGTCCCCAGGTaGGTATCATACAGAGTAGAA +
Preference number: 3 (lower is better)
Translates to: IITNPENPEGGLSPTHNWSWVPR*VSYRVE
Trigger: TTCTACTCTGTATGATACCAACCTGGGGACCCAAGA...CCAGTTGTGGGTCGGGCTCAACCCTCCCTCTGGGTTTTCAGGATTTGTAATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CAA 90 bp GACAAGCAGGTAGCAGAGCTGGAAGTAGAATCAAGGCTTTGCAATGCCCAGTTGCCTGCATTTCAGCAGTaGTATCACTTCCTGGCCTGT +
Preference number: 3 (lower is better)
Translates to: DKQVAELEVESRLCNAQLPAFQQ*YHFLAC
Trigger: ACAGGCCAGGAAGTGATACAACTGCTGAAATGCAGG...CAACTGGGCATTGCAAAGCCTTGATTCTACTTCCAGCTCTGCTACCTGCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 72 bp TCTACCCACCAGATGCCAGTAGCAGTGTCCCAGCTGTaGCAACCAAAAATGTCTCCAGACATGGCCAGATTT +
Preference number: 3 (lower is better)
Translates to: STHQMPVAVSQL*QPKMSPDMARF
Trigger: AAATCTGGCCATGTCTGGAGACATTTTTGGTTGTCACAGCTGGGACACTGCTACTGGCATCTGGTGGGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR TCA 72 bp TCCTGCTTGGAAATTATAGGGAAGCCCTGGGGTGGTTaGACCAACAAAGGGATCACCGCAGTGGTTTCCAAT +
Preference number: 3 (lower is better)
Translates to: SCLEIIGKPWGG*TNKGITAVVSN
Trigger: ATTGGAAACCACTGCGGTGATCCCTTTGTTGGTTCAACCACCCCAGGGCTTCCCTATAATTTCCAAGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR TCA 72 bp ATGGGGAGGAGAAGGATGCTTACACTAGATGAAGTCTaGGGCTGTCTCCAGCTCCAACAATGGATGTTTCCG +
Preference number: 3 (lower is better)
Translates to: MGRRRMLTLDEV*GCLQLQQWMFP
Trigger: CGGAAACATCCATTGTTGGAGCTGGAGACAGCCTCAGACTTCATCTAGTGTAAGCATCCTTCTCCTCCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 72 bp GAATCGTTGGGTTACGCTGCAAAGGTCGTCTTGGCTTaGTTTAATGGATTTCCTGGGTTGCCTTTCTGCCCA +
Preference number: 3 (lower is better)
Translates to: ESLGYAAKVVLA*FNGFPGLPFCP
Trigger: TGGGCAGAAAGGCAACCCAGGAAATCCATTAAAGCAAGCCAAGACGACCTTTGCAGCGTAACCCAACGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR GCA 72 bp CTGCATAATGACATCCGAACCACGTTCAGTCCCATTTaGAGTCAAGTGGCTTTGTCACTGGACCGCAGATGT +
Preference number: 3 (lower is better)
Translates to: LHNDIRTTFSPI*SQVALSLDRRC
Trigger: ACATCTGCGGTCCAGTGACAAAGCCACTTGACTGCAAATGGGACTGAACGTGGTTCGGATGTCATTATGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 72 bp ACACAAGTTGAGAGAAGAAGAGCTCTTCGCTTACTCTaGAAGCAAGAAGGCTGGGTGTGGAAGCTTCCTGTC +
Preference number: 3 (lower is better)
Translates to: TQVERRRALRLL*KQEGWVWKLPV
Trigger: GACAGGAAGCTTCCACACCCAGCCTTCTTGCTTCCAGAGTAAGCGAAGAGCTCTTCTTCTCTCAACTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 72 bp CTTTCCCTGCCTCAGTTAATCCTTGTAATAGCCCAGTaGGGAAAGGTGTGGCCCCTTTTCCTGTCTTGCAAA +
Preference number: 3 (lower is better)
Translates to: LSLPQLILVIAQ*GKVWPLFLSCK
Trigger: TTTGCAAGACAGGAAAAGGGGCCACACCTTTCCCCACTGGGCTATTACAAGGATTAACTGAGGCAGGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 72 bp AATTCTGAATCAGCAGAGCCTGCCCCATGGCACGGTTaGAGAATACTGCATAATGACATCCGAACCACGTTC +
Preference number: 3 (lower is better)
Translates to: NSESAEPAPWHG*RILHNDIRTTF
Trigger: GAACGTGGTTCGGATGTCATTATGCAGTATTCTCCAACCGTGCCATGGGGCAGGCTCTGCTGATTCAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CAA 90 bp GGAAGCCCGATGCTGTCAGATACACTGATTTTCCAAGAGAAGCCAGAAATCCAGCGAAGGCAAAACCACTaGCCACTAAATGAGGGCTCT +
Preference number: 3 (lower is better)
Translates to: GSPMLSDTLIFQEKPEIQRRQNH*PLNEGS
Trigger: AGAGCCCTCATTTAGTGGCAAGTGGTTTTGCCTTCG...CTGGATTTCTGGCTTCTCTTGGAAAATCAGTGTATCTGACAGCATCGGGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 72 bp GGACTTGGCCTGCCAACATTCTCAGCCTTGAGTTTATaGATGAGGGCGCATAGGAGACCTTGTAGATTCATG +
Preference number: 3 (lower is better)
Translates to: GLGLPTFSALSL*MRAHRRPCRFM
Trigger: CATGAATCTACAAGGTCTCCTATGCGCCCTCATTCATAAACTCAAGGCTGAGAATGTTGGCAGGCCAAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR TCA 72 bp CATCTTGGATGGAAGCTACGCAGAATGGTAAATCAATaGGTCCTTATGGCAGAGTGCACTCCGAGACAACCG +
Preference number: 3 (lower is better)
Translates to: HLGWKLRRMVNQ*VLMAECTPRQP
Trigger: CGGTTGTCTCGGAGTGCACTCTGCCATAAGGACTCATTGATTTACCATTCTGCGTAGCTTCCATCCAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 72 bp ACAGTGATATTTTCCCCACTAAACAATGGAAGAGTTTaGAGATCAGAGAGATGGGCTCACCTGCCCAGTGCC +
Preference number: 3 (lower is better)
Translates to: TVIFSPLNNGRV*RSERWAHLPSA
Trigger: GGCACTGGGCAGGTGAGCCCATCTCTCTGATCTGCAAACTCTTCCATTGTTTAGTGGGGAAAATATCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 72 bp CCTAGTCTCGGAGCCAATAACTTGCAGAACCCAGATTaGAGCCTAGCTATTCTGGTCTTAAACCCTAACCTG +
Preference number: 3 (lower is better)
Translates to: PSLGANNLQNPD*SLAILVLNPNL
Trigger: CAGGTTAGGGTTTAAGACCAGAATAGCTAGGCTGCAATCTGGGTTCTGCAAGTTATTGGCTCCGAGACTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 72 bp ATTTGTATGTCTTGCATTTGTTGCAGCCCATTGGTCTaGAGAGCGATCAAACCACACTACCTCAGCGTGTCC +
Preference number: 3 (lower is better)
Translates to: ICMSCICCSPLV*RAIKPHYLSVS
Trigger: GGACACGCTGAGGTAGTGTGGTTTGATCGCTCTGCAGACCAATGGGCTGCAACAAATGCAAGACATACAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 72 bp TCACCATTTGTATGTCTTGCATTTGTTGCAGCCCATTaGTCTGCAGAGCGATCAAACCACACTACCTCAGCG +
Preference number: 3 (lower is better)
Translates to: SPFVCLAFVAAH*SAERSNHTTSA
Trigger: CGCTGAGGTAGTGTGGTTTGATCGCTCTGCAGACCAATGGGCTGCAACAAATGCAAGACATACAAATGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 72 bp CCCATAAACGAATTTAAAGGGTGGAACTCAATGTGCTaGGGCTGCCTTTCTTACGTCTCAATGGCTCCCCAA +
Preference number: 3 (lower is better)
Translates to: PINEFKGWNSMC*GCLSYVSMAPQ
Trigger: TTGGGGAGCCATTGAGACGTAAGAAAGGCAGCCTCAGCACATTGAGTTCCACCCTTTAAATTCGTTTATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR TCA 72 bp AGGCTTGGGCATCAGTGTTTTAAAAAGCTCTGCAGGTaGGTCCAACATGCAACCAGGGTGAAGAATCATCAG +
Preference number: 3 (lower is better)
Translates to: RLGHQCFKKLCR*VQHATRVKNHQ
Trigger: CTGATGATTCTTCACCCTGGTTGCATGTTGGACTCACCTGCAGAGCTTTTTAAAACACTGATGCCCAAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 72 bp GCCTGTGCTTTTAGTAACACCCCTTCCCATCCCAATTaGATTCAATGGTCAATGCACAACATCTCCTCTGTC +
Preference number: 3 (lower is better)
Translates to: ACAFSNTPSHPN*IQWSMHNISSV
Trigger: GACAGAGGAGATGTTGTGCATTGACCATTGAATGCAATTGGGATGGGAAGGGGTGTTACTAAAAGCACAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR-3UTR CAA 90 bp CCAATCTTATTTGCAAATCTGATGAAATCCATGCTCCTTCTCCCTAGGAAAGAGTCCAGCTTGCTATGTTaGCCCCTGTGCTGTCTTCCT +
Preference number: 3 (lower is better)
Translates to: PILFANLMKSMLLLPRKESSLLC*PLCCLP
Trigger: AGGAAGACAGCACAGGGGCAAACATAGCAAGCTGGA...CTCTTTCCTAGGGAGAAGGAGCATGGATTTCATCAGATTTGCAAATAAGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 72 bp CTGCACCGGGTTTCTGTCCTCTCTCTGTCATGTTCCTaGTGCTCAAAGCTAATGACATTGTCCCAAAATACA +
Preference number: 3 (lower is better)
Translates to: LHRVSVLSLSCS*CSKLMTLSQNT
Trigger: TGTATTTTGGGACAATGTCATTAGCTTTGAGCATCAGGAACATGACAGAGAGAGGACAGAAACCCGGTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR GCA 72 bp CTTTCTGCCGAGACTAGGGGTGCTTGGCTACTAGGGTaGTTGTCTACCAATCTTATTTGCAAATCTGATGAA +
Preference number: 3 (lower is better)
Translates to: LSAETRGAWLLG*LSTNLICKSDE
Trigger: TTCATCAGATTTGCAAATAAGATTGGTAGACAAGCACCCTAGTAGCCAAGCACCCCTAGTCTCGGCAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 72 bp AGCCAAAAAGGTGGAAGCCACCCTAAGGTCCCTCAATaGGTGAATGATAAACAAAATGTGGTACATCCACAC +
Preference number: 3 (lower is better)
Translates to: SQKGGSHPKVPQ*VNDKQNVVHPH
Trigger: GTGTGGATGTACCACATTTTGTTTATCATTCACGCATTGAGGGACCTTAGGGTGGCTTCCACCTTTTTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 72 bp CTTGTTCTATCATCACATAAAGGGATCATCAGCCCATaGTTGGACACAGCCTGCTGGTGTTTTCAGAGACAA +
Preference number: 3 (lower is better)
Translates to: LVLSSHKGIISP*LDTACWCFQRQ
Trigger: TTGTCTCTGAAAACACCAGCAGGCTGTGTCCAAGCATGGGCTGATGATCCCTTTATGTGATGATAGAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 72 bp GCTCTGCCTTGGAAACATGATTTATTAGGGAATCGTTaGGTTACGCTGCAAAGGTCGTCTTGGCTTGCTTTA +
Preference number: 3 (lower is better)
Translates to: ALPWKHDLLGNR*VTLQRSSWLAL
Trigger: TAAAGCAAGCCAAGACGACCTTTGCAGCGTAACCCAACGATTCCCTAATAAATCATGTTTCCAAGGCAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR TCA 72 bp CTGGAGATGGATGATGGTGATGGTTGCACCACAATGTaGATGCACTCTGTGCCACTGAAATGGATACTTAAA +
Preference number: 3 (lower is better)
Translates to: LEMDDGDGCTTM*MHSVPLKWILK
Trigger: TTTAAGTATCCATTTCAGTGGCACAGAGTGCATTCACATTGTGGTGCAACCATCACCATCATCCATCTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 72 bp GTGTACTGCAGGAAGAGGATTTGGAACCCTTGGACGTaGCCTTACTTGTTAAGAAGTAGCATTTGTGAAGCA +
Preference number: 3 (lower is better)
Translates to: VYCRKRIWNPWT*PYLLRSSICEA
Trigger: TGCTTCACAAATGCTACTTCTTAACAAGTAAGGTCACGTCCAAGGGTTCCAAATCCTCTTCCTGCAGTACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 72 bp TCAGAAATGTCTCGCACCCTATTCTCAGAAGTTGGCTaGGTTCTCAGAAGGTTTCACGTTTCAGACCTAGAA +
Preference number: 3 (lower is better)
Translates to: SEMSRTLFSEVG*VLRRFHVSDLE
Trigger: TTCTAGGTCTGAAACGTGAAACCTTCTGAGAACTCAGCCAACTTCTGAGAATAGGGTGCGAGACATTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 72 bp TCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTaGCTGGCATCCAGTGGATATCAACAGACGTTTTTG +
Preference number: 3 (lower is better)
Translates to: STLTCLFSFMPH*LASSGYQQTFL
Trigger: CAAAAACGTCTGTTGATATCCACTGGATGCCAGGCAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR GCA 72 bp TTCCCATCCAGTTTTTCCATTATTGCGCACAGTAGGTaGCGAGGTGTGTATCTTATTATCTCCATTTGCCCA +
Preference number: 3 (lower is better)
Translates to: FPSSFSIIAHSR*RGVYLIISICP
Trigger: TGGGCAAATGGAGATAATAAGATACACACCTCGGCACCTACTGTGCGCAATAATGGAAAAACTGGATGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 72 bp TGCCTTAGCCTGTGGACTTTCTTCCAAATTGTCATATaGCAGATCACCTTGTTCATAATGGCACACAGTAGG +
Preference number: 3 (lower is better)
Translates to: CLSLWTFFQIVI*QITLFIMAHSR
Trigger: CCTACTGTGTGCCATTATGAACAAGGTGATCTGTCATATGACAATTTGGAAGAAAGTCCACAGGCTAAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 72 bp AGGCAAAACCACTTGCCACTAAATGAGGGCTCTGATTaGTACCAATTTCTTAAAGCACTCTCTGAAGGTTCT +
Preference number: 3 (lower is better)
Translates to: RQNHLPLNEGSD*YQFLKALSEGS
Trigger: AGAACCTTCAGAGAGTGCTTTAAGAAATTGGTAGCAATCAGAGCCCTCATTTAGTGGCAAGTGGTTTTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR CCA 72 bp AAAACCATCATCCTATCATCCCCTCATCACCCATCTTaGATGGAAGCTACGCAGAATGGTAAATCAATGAGT +
Preference number: 3 (lower is better)
Translates to: KTIILSSPHHPS*MEATQNGKSMS
Trigger: ACTCATTGATTTACCATTCTGCGTAGCTTCCATCCAAGATGGGTGATGAGGGGATGATAGGATGATGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 72 bp ATTTCTTTAATCTTCACACCTTACCCACTGTTTCCATaGAGGACTTTGAGGTTAAGAGAGGTAGGTACCCTG +
Preference number: 3 (lower is better)
Translates to: ISLIFTPYPLFP*RTLRLREVGTL
Trigger: CAGGGTACCTACCTCTCTTAACCTCAAAGTCCTCCATGGAAACAGTGGGTAAGGTGTGAAGATTAAAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 72 bp TGTAGATTCATGCAACCGCAAGGTGTACAGTTATTGTaGATTTGGGATTCAGCGGGAAAGTACACAATTTCT +
Preference number: 3 (lower is better)
Translates to: CRFMQPQGVQLL*IWDSAGKYTIS
Trigger: AGAAATTGTGTACTTTCCCGCTGAATCCCAAATGCACAATAACTGTACACCTTGCGGTTGCATGAATCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR GCA 72 bp GTATTCCCTATTAGTGACTTGAGACAGGAAGATGGTTaGTTGGCTTATAATTTGGCTCACTGGAAAGGATTG +
Preference number: 3 (lower is better)
Translates to: VFPISDLRQEDG*LAYNLAHWKGL
Trigger: CAATCCTTTCCAGTGAGCCAAATTATAAGCCAAGCAACCATCTTCCTGTCTCAAGTCACTAATAGGGAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 72 bp TTCAGCCTTAAAAAGGAAGGAAACTCTGACACATGCTaGCACATGAACCTCGAAAACATTGTGCTAAGTGAT +
Preference number: 3 (lower is better)
Translates to: FSLKKEGNSDTC*HMNLENIVLSD
Trigger: ATCACTTAGCACAATGTTTTCGAGGTTCATGTGGCAGCATGTGTCAGAGTTTCCTTCCTTTTTAAGGCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 72 bp TTCATGCAACCGCAAGGTGTACAGTTATTGTGCATTTaGGATTCAGCGGGAAAGTACACAATTTCTAAACTG +
Preference number: 3 (lower is better)
Translates to: FMQPQGVQLLCI*DSAGKYTISKL
Trigger: CAGTTTAGAAATTGTGTACTTTCCCGCTGAATCCCAAATGCACAATAACTGTACACCTTGCGGTTGCATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
3UTR CCA 72 bp CAGAAGGTTTCACGTTTCAGACCTAGAATTTCACCCTaGAACCAAAGGGGAACTGTGAATCTCTTAAAAGAA +
Preference number: 3 (lower is better)
Translates to: QKVSRFRPRISP*NQRGTVNLLKE
Trigger: TTCTTTTAAGAGATTCACAGTTCCCCTTTGGTTCCAGGGTGAAATTCTAGGTCTGAAACGTGAAACCTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 72 bp GTCATTTACCACCCAATTATATTATCTGAACTTTCATaGAATTGTGCAGTGACCAGTCACCAAGAGCTCAGC +
Preference number: 3 (lower is better)
Translates to: VIYHPIILSELS*NCAVTSHQELS
Trigger: GCTGAGCTCTTGGTGACTGGTCACTGCACAATTCCATGAAAGTTCAGATAATATAATTGGGTGGTAAATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 72 bp GAAAGAGAAAACCCAATCCTTCAATCCCAAGTCTACTaGGTTCTTGAAAGCAGTTTTAGGTCCAACGTACAA +
Preference number: 3 (lower is better)
Translates to: ERENPILQSQVY*VLESSFRSNVQ
Trigger: TTGTACGTTGGACCTAAAACTGCTTTCAAGAACTCAGTAGACTTGGGATTGAAGGATTGGGTTTTCTCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 72 bp ACTGCATTTTACAAACACAACAAGGATCCTGACACTTaGAAAGAATCTTACAGTGTTCAGGTGCTTTTCCAG +
Preference number: 3 (lower is better)
Translates to: TAFYKHNKDPDT*KESYSVQVLFQ
Trigger: CTGGAAAAGCACCTGAACACTGTAAGATTCTTTCCAAGTGTCAGGATCCTTGTTGTGTTTGTAAAATGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CCA 72 bp GCCGAAGACAAATCTACTTTTGTTTGCTTACCCAACTaGCAGATATATCTATCACAGAATATCTCTTTCTGC +
Preference number: 3 (lower is better)
Translates to: AEDKSTFVCLPN*QIYLSQNISFC
Trigger: GCAGAAAGAGATATTCTGTGATAGATATATCTGCCAGTTGGGTAAGCAAACAAAAGTAGATTTGTCTTCGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 72 bp ATGCTGCCACATGAACCTCGAAAACATTGTGCTAAGTaGTATAAACTAGTCATGAAAGGACAAAGACTGTAT +
Preference number: 3 (lower is better)
Translates to: MLPHEPRKHCAK*YKLVMKGQRLY
Trigger: ATACAGTCTTTGTCCTTTCATGACTAGTTTATATCACTTAGCACAATGTTTTCGAGGTTCATGTGGCAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR TCA 72 bp CATTTAGTGTGTCATTTACCACCCAATTATATTATCTaGACTTTCATGGAATTGTGCAGTGACCAGTCACCA +
Preference number: 3 (lower is better)
Translates to: HLVCHLPPNYII*TFMELCSDQSP
Trigger: TGGTGACTGGTCACTGCACAATTCCATGAAAGTTCAGATAATATAATTGGGTGGTAAATGACACACTAAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR GCA 72 bp TTCAATAGGTTTTGGTACAGTAAATATTTCCTATGCTaGCTTGACATTGCCAAAGCCAAACTCCTCAGAATT +
Preference number: 3 (lower is better)
Translates to: FNRFWYSKYFLC*LDIAKAKLLRI
Trigger: AATTCTGAGGAGTTTGGCTTTGGCAATGTCAAGGCAGCATAGGAAATATTTACTGTACCAAAACCTATTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCCTGGCCAGCTCCCCCTaGAGCGCCGCCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PGDQMWWHHAASRWLSKGLASSP*SAASFS
Trigger: GGAGAAGCTGGCGGCGCTGCAGGGGGAGCTGGCCAG...GCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCCCTCCTGGAGGCGGGTaGCCTCGTCCAGAGACGCCT +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSPPGGG*PRPETP
Trigger: AGGCGTCTCTGGACGAGGCCACCCGCCTCCAGGAGG...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCCCCGGGCCGGCCACATaGACTCCTCCGAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSPGPAT*TPPRTA
Trigger: AGCTGTCCTCGGAGGAGTCCATGTGGCCGGCCCGGG...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp GAGGCAGGTCCTGCTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGAGTAACCTCGGCCTCTaGGTCCCGGAGCATGGGGCC +
Preference number: 4 (lower is better)
Translates to: EAGPAEELPEGRCRVLSLSNLGL*VPEHGA
Trigger: GGCCCCATGCTCCGGGACTCAGAGGCCGAGGTTACT...CAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAGCAGGACCTGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR TCA 90 bp CACCATGTGCCCTTCCAAATGCTGGGGTCTACAGACCAGGCGAGGGGAGTCCGCAGGGTCAGCACCCGGTaGTGGAGCTGCTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: HHVPFQMLGSTDQARGVRRVSTR*WSCWAR
Trigger: GCGGGCCCAGCAGCTCCATCACCGGGTGCTGACCCT...GCGGACTCCCCTCGCCTGGTCTGTAGACCCCAGCATTTGGAAGGGCACATGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR TCA 90 bp CCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCCAGCGCCCTGGTCCCTaGGCTGGCACTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: PGDQMWWHHAASRWLSKGQRPGP*AGTAGS
Trigger: TGACCCTGCAGTGCCAGCTCAGGGACCAGGGCGCTG...GCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp GCGAGGGGAGTCCGCCATCCTGTACTGTGCCCCAGGGAGCCACGGCACAAAGCTCCTGGGTCGCCCACCTaGTTCGGGGCACGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: ARGVRHPVLCPREPRHKAPGSPT*FGARVS
Trigger: AGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGG...AGCTTTGTGCCGTGGCTCCCTGGGGCACAGTACAGGATGGCGGACTCCCCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR TCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCTCACTTCCTGGCCTGTaGGACCTCGGGCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSSLPGL*DLGPQP
Trigger: TGGCTGGGGCCCGAGGTCTCACAGGCCAGGAAGTGA...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCCAGTTGGGCTGTCTGTaGTGGCCACTCCGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSQLGCL*WPLRLG
Trigger: CCCGAGCCGGAGTGGCCAGCACAGACAGCCCAACTG...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGGCCCCGGAGGATAGCTaGCCCAGGACCCGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: VLFSWVAHLIRGTSLCSRAPEDS*PRTRGR
Trigger: CCTGCCTCGGGTCCTGGGGCAGCTATCCTCCGGGGC...CCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR GCA 90 bp CCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCCGCCTGCTGCCCCAGTaGCTCGTCCTTGCGCCGCAA +
Preference number: 4 (lower is better)
Translates to: PGDQMWWHHAASRWLSKGRLLPQ*LVLAPQ
Trigger: TTGCGGCGCAAGGACGAGGCACTGGGGCAGCAGGCG...GCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp TTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTGGAAGCGCAGGACGCGCTCCTaGTCCCGCACCAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: FSWVAHLIRGTSLCSRWKRRTRS*SRTRPS
Trigger: GCTGGGCCTGGTGCGGGAGCAGGAGCGCGTCCTGCG...CTTCCACCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGCCCGCTCGCGCTCGCTaGGCTCTGCCCTCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHEPARAR*ALPSPA
Trigger: TGCAGGCGAGGGCAGAGCGCAGCGAGCGCGAGCGGG...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGGGAGCTGGCGCTCGGTaGCCCGGTGCTCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHEGAGAR*PGAPAG
Trigger: GCCTGCAGGAGCACCGGGCCACCGAGCGCCAGCTCC...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGACCACCTGCAGCCAGCTaGGGATGGCCCGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGPPAAS*GWPGLA
Trigger: GGCCAGGCCGGGCCATCCTCAGCTGGCTGCAGGTGG...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp TTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTGGAAGAGCACTGCCAGCCCCTaGTGCCCGGCTGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: FSWVAHLIRGTSLCSRWKSTASP*CPAAGW
Trigger: CCACCCTGCAGCCGGGCAGCAGGGGCTGGCAGTGCT...CTTCCACCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCCAGTTGGGCTGTCTGTaGTGGCCACTCCGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: PGDQMWWHHAASRWLSKGQLGCL*WPLRLG
Trigger: CCCGAGCCGGAGTGGCCAGCACAGACAGCCCAACTG...GCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGCCTCATGCTTCCTCCTaGGCCGCCTCCCGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: VLFSWVAHLIRGTSLCSRPHASS*AASRRA
Trigger: TGCCCTCCGGGAGGCGGCGCAGGAGGAAGCATGAGG...CCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCCTCAGCAGGCCCCTGTaGAGGGTTTGGGCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSLSRPL*RVWAGF
Trigger: GAAGCCAGCCCAAACCCTCCACAGGGGCCTGCTGAG...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCTGGGGAGCTCGCTTGTaGTCTCCGGGCCTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSWGARL*SPGLEP
Trigger: TGGCTCCAGGCCCGGAGACCACAAGCGAGCTCCCCA...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp CCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCCTCAGAGCTTGCCCCTaGGCCACAGAACACCTGGGC +
Preference number: 4 (lower is better)
Translates to: PGDQMWWHHAASRWLSKGLRACP*ATEHLG
Trigger: GCCCAGGTGTTCTGTGGCTCAGGGGCAAGCTCTGAG...GCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CACCATGTGCCCTTCCAAATGCTGGGGTCTACAGACCAGGCGAGGGGAGTCCGCCCTGGGTCGCCCACCTaGTTCGGGGCACGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: HHVPFQMLGSTDQARGVRPGSPT*FGARVS
Trigger: AGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGG...GCGGACTCCCCTCGCCTGGTCTGTAGACCCCAGCATTTGGAAGGGCACATGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR TCA 90 bp GCGAGGGGAGTCCGCCATCCTGTACTGTGCCCCAGGGAGCCACGGCACAAAGCTCGGCAGAGGGGAGCATaGAGTCACAAGACGACGGAC +
Preference number: 4 (lower is better)
Translates to: ARGVRHPVLCPREPRHKARQRGA*SHKTTD
Trigger: GTCCGTCGTCTTGTGACTTCATGCTCCCCTCTGCCG...AGCTTTGTGCCGTGGCTCCCTGGGGCACAGTACAGGATGGCGGACTCCCCTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR TCA 90 bp GAGGCAGGTCCTGCTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGTGGACCACTCCCGTGTaGACCAAGGCAGCTCACTCC +
Preference number: 4 (lower is better)
Translates to: EAGPAEELPEGRCRVLSLWTTPV*TKAAHS
Trigger: GGAGTGAGCTGCCTTGGTTCACACGGGAGTGGTCCA...CAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAGCAGGACCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR TCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGCTGATGAGCAGGGCCTaGGCCCGTCCACCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHELMSRA*ARPPAA
Trigger: GGCTGCAGGTGGACGGGCTCAGGCCCTGCTCATCAG...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCGTCCATGCGGAGGAGTaGCTCGTCCAAGCACTCCTC +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSVHAEE*LVQALL
Trigger: GAGGAGTGCTTGGACGAGTCACTCCTCCGCATGGAC...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp GAGGCAGGTCCTGCTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGCAGGAACTTCGCTGGTaGCCAGGGCCGTGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: EAGPAEELPEGRCRVLSLQELRW*PGPWSF
Trigger: GAAAGACCACGGCCCTGGGCACCAGCGAAGTTCCTG...CAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAGCAGGACCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR GCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCGTGGTGGCACCACGCTaGATCTCGCTGGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSVVAPR*ISLAQQ
Trigger: TTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGCCTCCTGGAGGCGGGTaGCCTCGTCCAGAGACGCCT +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHEPPGGG*PRPETP
Trigger: AGGCGTCTCTGGACGAGGCCACCCGCCTCCAGGAGG...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGGACCACTCCCGTGAGCCAGGATCCTTGCTaGGCTCAGGAGCTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LKSFRRGGVGSCRWTTPVSQDPC*AQELRG
Trigger: CCCTCTGAGCTCCTGAGCCCAGCAAGGATCCTGGCT...CACGGGAGTGGTCCAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp TTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTGGAAGCCTTACGGCTTGGGCTaGCCAGGACCCAGCCGTGCG +
Preference number: 4 (lower is better)
Translates to: FSWVAHLIRGTSLCSRWKPYGLG*PGPSRA
Trigger: CGCACGGCTGGGTCCTGGCCAGCCCAAGCCGTAAGG...CTTCCACCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GGGGAGCATGAAGTCACAAGACGACGGACGTCTGAGCTCCTGGGACTCCTGGAGCTCTCCTCCCGGATCTaGCTGGCCAGCTCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GEHEVTRRRTSELLGLLELSSRI*LASSPC
Trigger: GCAGGGGGAGCTGGCCAGCCAGATCCGGGAGGAGAG...CTCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTTGTGACTTCATGCTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCTGGTCTCATGAGCCCTaGAGAAGGTGGCTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSWSHEP*RRWLGV
Trigger: CACCCCCAGCCACCTTCTCCAGGGCTCATGAGACCA...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531445.3
ENST00000639345.1
3UTR CAA 72 bp GCGACCCAGCGTAGGAGCAGCAGAGCCGACAGGTCCTaGGGACTCCAGACCCGGCTTCCTGTCACTCACATG +
Preference number: 4 (lower is better)
Translates to: ATQRRSSRADRS*GLQTRLPVTHM
Trigger: CATGTGAGTGACAGGAAGCCGGGTCTGGAGTCCCAAGGACCTGTCGGCTCTGCTGCTCCTACGCTGGGTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp TTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTGGAAGCCTGCAGCAGGTGGGTaGTCAGGCGGTTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: FSWVAHLIRGTSLCSRWKPAAGG*SGGSSP
Trigger: GGGAGAGGAACCGCCTGATCACCCACCTGCTGCAGG...CTTCCACCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp TTCCTGCCTGAACCTACTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGCATCTGCCTGCAGCAGGTGGGTaGTCAGGCGGTTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: FLPEPTGLPEQVLPLEHLPAAGG*SGGSSP
Trigger: GGGAGAGGAACCGCCTGATCACCCACCTGCTGCAGG...CAGATGCTCCAGGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCAGGCAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp CTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGGACCACTCCCGTGCCGTCATCTCAGACTTaGCGTCCAGGTGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: LKSFRRGGVGSCRWTTPVPSSQT*RPGGGL
Trigger: CAAGCCACCACCTGGACGTCAAGTCTGAGATGACGG...CACGGGAGTGGTCCAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR TCA 90 bp CACCATGTGCCCTTCCAAATGCTGGGGTCTACAGACCAGGCGAGGGGAGTCCGCGACCTGGTTCCACAGTaGCCGCTGCCAGGCACGTTC +
Preference number: 4 (lower is better)
Translates to: HHVPFQMLGSTDQARGVRDLVPQ*PLPGTF
Trigger: GAACGTGCCTGGCAGCGGTCACTGTGGAACCAGGTC...GCGGACTCCCCTCGCCTGGTCTGTAGACCCCAGCATTTGGAAGGGCACATGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR TCA 90 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTGACTTCCAGTCCTGGGTCGCCCACCTaGTTCGGGGCACGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: PTSPTGHCPAIPLWLTSSPGSPT*FGARVS
Trigger: AGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGG...ACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAATTTCCTCCTGGGCTaGCCATCCCCAGCTGGCGTC +
Preference number: 4 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSNFLLG*PSPAGV
Trigger: GACGCCAGCTGGGGATGGTCAGCCCAGGAGGAAATT...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp TTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTGGAAGCTGCCCTTCACCCGCTaGAGGACGGGGACAAGCAGG +
Preference number: 4 (lower is better)
Translates to: FSWVAHLIRGTSLCSRWKLPFTR*RTGTSR
Trigger: CCTGCTTGTCCCCGTCCTTCAGCGGGTGAAGGGCAG...CTTCCACCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGCCTGGGCAGGGGCAGTaGGTCACCCTGAACACAGCC +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHEPGQGQ*VTLNTA
Trigger: GGCTGTGTTCAGGGTGACTCACTGCCCCTGCCCAGG...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCTGCAGGGTGGACAGCTaGTGGAAACAAGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSCRVDS*WKQAST
Trigger: CGTGGAGGCTTGTTTCCAGCAGCTGTCCACCCTGCA...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GCGAGGGGAGTCCGCCATCCTGTACTGTGCCCCAGGGAGCCACGGCACAAAGCTTCGTTGAGCATGTTCTaGGCCAGCTCGGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ARGVRHPVLCPREPRHKASLSMF*ASSESR
Trigger: CCTGCTCTCCGAGCTGGCGCAGAACATGCTCAACGA...AGCTTTGTGCCGTGGCTCCCTGGGGCACAGTACAGGATGGCGGACTCCCCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR GCA 90 bp CCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCGTGGTGGCACCACGCTaGATCTCGCTGGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: PGDQMWWHHAASRWLSKGVVAPR*ISLAQQ
Trigger: TTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC...GCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CGTGCTGATTTACTCACAGGAGTATCTCTCCCATTGTCCTGTGAGGTCCCCGGCCGCAGCCGCCACTGCTaGCGCCTGGCCACGCTCTCC +
Preference number: 4 (lower is better)
Translates to: RADLLTGVSLPLSCEVPGRSRHC*RLATLS
Trigger: GGAGAGCGTGGCCAGGCGGCAGCAGTGGCGGCTGCG...GCCGGGGACCTCACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GAGTCCGCCATCCTGTACTGTGCCCCAGGGAGCCACGGCACAAAGCTTGAGCCGTGGTGCCCAGGGCCGTaGTCTTTCCCGGCTTATCAC +
Preference number: 4 (lower is better)
Translates to: ESAILYCAPGSHGTKLEPWCPGP*SFPAYH
Trigger: GTGATAAGCCGGGAAAGACCACGGCCCTGGGCACCA...CGGCTCAAGCTTTGTGCCGTGGCTCCCTGGGGCACAGTACAGGATGGCGGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp CAGAGGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGTGGGCAGCGCCCTaGTCCCTGAGCTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: QREAEGGSPNQCCRSLPAWWAAP*SLSWHC
Trigger: GCAGTGCCAGCTCAGGGACCAGGGCGCTGCCCACCA...AGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGTCGTCCAGAGACGCCTaGTGGGCAGCGCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLSSRDA*WAAPWS
Trigger: GGACCAGGGCGCTGCCCACCAGGCGTCTCTGGACGA...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGACCTCCTGGAGGCGGGTaGCCTCGTCCAGAGACGCCT +
Preference number: 4 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGPPGGG*PRPETP
Trigger: AGGCGTCTCTGGACGAGGCCACCCGCCTCCAGGAGG...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp TACCAAAGTGAACCTACTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGCATCTGGCCTGGAGCTCCTCCTaGAGGCGGGTGGCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: YQSEPTGLPEQVLPLEHLAWSSS*RRVASS
Trigger: GGACGAGGCCACCCGCCTCCAGGAGGAGCTCCAGGC...CAGATGCTCCAGGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCACTTTGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324058.9
CDS-3UTR CCA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCGTGGTGGCTTGTCTCTaGGACTCCCGGAGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSVVACL*DSRSQE
Trigger: TTCCTGGCTCCGGGAGTCCCAGAGACAAGCCACCAC...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCTTGGGCTGTCTGTGCTaGCCACTCCGGCTCGGGAAT +
Preference number: 4 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSLGCLC*PLRLGN
Trigger: ATTCCCGAGCCGGAGTGGCCAGCACAGACAGCCCAA...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGGACCACTCCCGTGGGAAGGGGTGCTGGATaGGAACGATGCAGTGACTGC +
Preference number: 4 (lower is better)
Translates to: LKSFRRGGVGSCRWTTPVGRGAG*ERCSDC
Trigger: GCAGTCACTGCATCGTTCCCATCCAGCACCCCTTCC...CACGGGAGTGGTCCAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp CCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCGGAGACCAGATGTGGTaGCACCACGCTGCATCTCGC +
Preference number: 4 (lower is better)
Translates to: PGDQMWWHHAASRWLSKGGDQMW*HHAASR
Trigger: GCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCC...GCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GAGTCCGCCATCCTGTACTGTGCCCCAGGGAGCCACGGCACAAAGCTTGAGCCGGGGAGGGGCAGGACTTaGCCTGCCAACATTCTCAGC +
Preference number: 4 (lower is better)
Translates to: ESAILYCAPGSHGTKLEPGRGRT*PANILS
Trigger: GCTGAGAATGTTGGCAGGCCAAGTCCTGCCCCTCCC...CGGCTCAAGCTTTGTGCCGTGGCTCCCTGGGGCACAGTACAGGATGGCGGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp TTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTGGAAGGACTGGGGAGGCATCTaGCGTGGGGACGAGGACTCG +
Preference number: 4 (lower is better)
Translates to: FSWVAHLIRGTSLCSRWKDWGGI*RGDEDS
Trigger: CGAGTCCTCGTCCCCACGCCAGATGCCTCCCCAGTC...CTTCCACCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGCAGGCGCTTCTCTCCTaGGCCACGTGGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHEQALLS*ATWVLS
Trigger: GCTGAGCACCCACGTGGCCCAGGAGAGAAGCGCCTG...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCCTCCTGGAGCAGCAGTaGTCGCCAAGAAGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSLLEQQ*SPRSGV
Trigger: GACTCCGCTTCTTGGCGACCACTGCTGCTCCAGGAG...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCGAGGAGGCGGGGACCTaGTGGCCAACTCTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSEEAGT*WPTLLG
Trigger: TCCAAGAAGAGTTGGCCACCAGGTCCCCGCCTCCTC...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGATGGGGTGCCTCTCAGTaGGGGAGGGAGCGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGWGASQ*GRERAG
Trigger: GCCAGCTCGCTCCCTCCCCCACTGAGAGGCACCCCA...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTGACTTCCAGTCTCAGAGCTTGCCCCTaGGCCACAGAACACCTGGGC +
Preference number: 4 (lower is better)
Translates to: PTSPTGHCPAIPLWLTSSLRACP*ATEHLG
Trigger: GCCCAGGTGTTCTGTGGCTCAGGGGCAAGCTCTGAG...ACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CAGAGGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTAGTAACCTCGGCCTCTaGGTCCCGGAGCATGGGGCC +
Preference number: 4 (lower is better)
Translates to: QREAEGGSPNQCCRSLPASNLGL*VPEHGA
Trigger: GGCCCCATGCTCCGGGACTCAGAGGCCGAGGTTACT...AGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CACCATGTGCCCTTCCAAATGCTGGGGTCTACAGACCAGGCGAGGGGAGTCCGCCCAGTGCCACGTCGTTaGGCATGTTCTGCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: HHVPFQMLGSTDQARGVRPVPRR*ACSAPA
Trigger: AGCTGGCGCAGAACATGCTCAACGACGTGGCACTGG...GCGGACTCCCCTCGCCTGGTCTGTAGACCCCAGCATTTGGAAGGGCACATGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR TCA 90 bp TTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTGGAAGGACATCTCTGGTGGGTaGGCCTGGGTCAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: FSWVAHLIRGTSLCSRWKDISGG*AWVRVW
Trigger: CCAGACCCTGACCCAGGCTCACCCACCAGAGATGTC...CTTCCACCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp GAGGCAGGTCCTGCTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGAAGCCCTGGGGTGGTTaGACCAACAAAGGGATCACC +
Preference number: 4 (lower is better)
Translates to: EAGPAEELPEGRCRVLSLKPWGG*TNKGIT
Trigger: GGTGATCCCTTTGTTGGTTCAACCACCCCAGGGCTT...CAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAGCAGGACCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR TCA 90 bp TCCTGTGTGCAGTGGGATGGACTGTTCACCCCAGGAGTGCTCCATTGGCCTTGCCGAGGCAGGTCCTGCTaGAGAGCTTCCGGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: SCVQWDGLFTPGVLHWPCRGRSC*RASGGE
Trigger: CTCCCCTCCGGAAGCTCTTCAGCAGGACCTGCCTCG...GCAAGGCCAATGGAGCACTCCTGGGGTGAACAGTCCATCCCACTGCACACAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCGGCGGCCTTAGTCTCTaGAGCCCCATTCTGATCCTG +
Preference number: 4 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSGGLSL*SPILIL
Trigger: CAGGATCAGAATGGGGCTTCAGAGACTAAGGCCGCC...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp CCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCGGTTCTGCGGAGATCTaGGACACCCATGGCCAACTC +
Preference number: 4 (lower is better)
Translates to: PGDQMWWHHAASRWLSKGGSAEI*DTHGQL
Trigger: GAGTTGGCCATGGGTGTCTCAGATCTCCGCAGAACC...GCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp CTGGAGCATCTGATGGGTGGCAAGGAGCCACCATGTGCCCTTCCAAATGCTGGGGGCCCTGCAGTCCACTaGGTGGGGTGCCTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: LEHLMGGKEPPCALPNAGGPAVH*VGCLSV
Trigger: CACTGAGAGGCACCCCACTCAGTGGACTGCAGGGCC...CCCAGCATTTGGAAGGGCACATGGTGGCTCCTTGCCACCCATCAGATGCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp GAGGCAGGTCCTGCTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGTACTCATGGAGCGACTaGGCAGACTTACGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: EAGPAEELPEGRCRVLSLYSWSD*ADLRGS
Trigger: GCTTCCGCGTAAGTCTGCTCAGTCGCTCCATGAGTA...CAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAGCAGGACCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGAGCACTGCCAGCCCCTaGTGCCCGGCTGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGSTASP*CPAAGW
Trigger: CCACCCTGCAGCCGGGCAGCAGGGGCTGGCAGTGCT...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGCAGGAACTTCGCTGGTaGCCAGGGCCGTGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: VLFSWVAHLIRGTSLCSRQELRW*PGPWSF
Trigger: GAAAGACCACGGCCCTGGGCACCAGCGAAGTTCCTG...CCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCCCAGGACATGGACCCTaGGTAGAAGGTGCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSPGHGP*VEGARS
Trigger: AGAACGAGCACCTTCTACGCAGGGTCCATGTCCTGG...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GCGAGGGGAGTCCGCCATCCTGTACTGTGCCCCAGGGAGCCACGGCACAAAGCTGCTTTTCCCTGGAGGTaGTCCCTTCCCCTCACCAAA +
Preference number: 4 (lower is better)
Translates to: ARGVRHPVLCPREPRHKAAFPWR*SLPLTK
Trigger: TTTGGTGAGGGGAAGGGAGCACCTCCAGGGAAAAGC...AGCTTTGTGCCGTGGCTCCCTGGGGCACAGTACAGGATGGCGGACTCCCCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR GCA 90 bp GAGGCAGGTCCTGCTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGGGCTTGACAAGAGCATaGTTTGCCCACTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: EAGPAEELPEGRCRVLSLGLTRA*FAHFPS
Trigger: GGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCC...CAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAGCAGGACCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR GCA 90 bp CACCATGTGCCCTTCCAAATGCTGGGGTCTACAGACCAGGCGAGGGGAGTCCGCGTGGTGGCACCACGCTaGATCTCGCTGGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: HHVPFQMLGSTDQARGVRVVAPR*ISLAQQ
Trigger: TTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC...GCGGACTCCCCTCGCCTGGTCTGTAGACCCCAGCATTTGGAAGGGCACATGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR GCA 90 bp TCCTGTGTGCAGTGGGATGGACTGTTCACCCCAGGAGTGCTCCATTGGCCTTGCCGCCATCCTGTACTGTaGCCCAGGGAGCCACGGCAC +
Preference number: 4 (lower is better)
Translates to: SCVQWDGLFTPGVLHWPCRHPVL*PREPRH
Trigger: GTGCCGTGGCTCCCTGGGGCACAGTACAGGATGGCG...GCAAGGCCAATGGAGCACTCCTGGGGTGAACAGTCCATCCCACTGCACACAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGGCAGGGCCCCTTCTGTaGAGGGCACCGTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHEAGPLL*RAPCPS
Trigger: AGAAGGACACGGTGCCCTGCACAGAAGGGGCCCTGC...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp GTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGGTGCCCCTAGACTTCTaGCCGCAGAAGCGAGCACAG +
Preference number: 4 (lower is better)
Translates to: VLFSWVAHLIRGTSLCSRVPLDF*PQKRAQ
Trigger: CTGTGCTCGCTTCTGCGGGCAGAAGTCTAGGGGCAC...CCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGCACTCCTGCAGCGGCTaGAAGGGTGCTGGACCGACA +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHEHSCSG*KGAGPT
Trigger: TGTCGGTCCAGCACCCTTGCAGCCGCTGCAGGAGTG...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp CAGAGGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTCCTGGGCCACGTGGGTaGTCAGCTGGTCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: QREAEGGSPNQCCRSLPAPGPRG*SAGPPS
Trigger: GGAAGGTGGACCAGCTGAGCACCCACGTGGCCCAGG...AGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGCGCCGCAACCGCTCCTaGAACCGCCGCAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: VPGARINIDLSLLLHATLRRNRS*NRRSRH
Trigger: GTGGCGGCTGCGGCGGTTGCAGGAGCGGTTGCGGCG...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp CAGAGGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTCCAGTGCCTCGTCCTTaGGCCGCAACCGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: QREAEGGSPNQCCRSLPAPVPRP*AATAPA
Trigger: TGCAGGAGCGGTTGCGGCGCAAGGACGAGGCACTGG...AGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp ACTTCTTCCCCAGCAGCATCCAGCCAGACACTCGCACAGCAGTCACTAAATGCAGTGGCCCGGTGCTCCTaGAGGCTGCGCGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: TSSPAASSQTLAQQSLNAVARCS*RLRAAS
Trigger: AGAGGCGGCGCGCAGCCTGCAGGAGCACCGGGCCAC...TGCATTTAGTGACTGCTGTGCGAGTGTCTGGCTGGATGCTGCTGGGGAAGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GAGTCCGCCATCCTGTACTGTGCCCCAGGGAGCCACGGCACAAAGCTTGAGCCGAGGGTGGACAGCTGCTaGAAACAAGCCTCCACGTCC +
Preference number: 4 (lower is better)
Translates to: ESAILYCAPGSHGTKLEPRVDSC*KQASTS
Trigger: GGACGTGGAGGCTTGTTTCCAGCAGCTGTCCACCCT...CGGCTCAAGCTTTGTGCCGTGGCTCCCTGGGGCACAGTACAGGATGGCGGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp CTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGGACCACTCCCGTGGTGGAGGGTTTGGGCTaGCTTCATCCCAATGAGGCA +
Preference number: 4 (lower is better)
Translates to: LKSFRRGGVGSCRWTTPVVEGLG*LHPNEA
Trigger: TGCCTCATTGGGATGAAGCCAGCCCAAACCCTCCAC...CACGGGAGTGGTCCAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp GTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTCCCCTACCAGCCTGTaGTTATCCCGCTCGAGCCTG +
Preference number: 4 (lower is better)
Translates to: VLFSWVAHLIRGTSLCSRSPTSL*LSRSSL
Trigger: CAGGCTCGAGCGGGATAACCACAGGCTGGTAGGGGA...CCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGGAGCATGAAGTCACAAGACGACGGACGTCTGAGCTCCTGGGACTCCTGGAGCTGAGTCCCGGAGCATaGGGCCATTGCTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: GEHEVTRRRTSELLGLLELSPGA*GHCSGS
Trigger: GCTCCCTGAGCAATGGCCCCATGCTCCGGGACTCAG...CTCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTTGTGACTTCATGCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GCGAGGGGAGTCCGCCATCCTGTACTGTGCCCCAGGGAGCCACGGCACAAAGCTGAGCTCAGAGGGTGCTaGGACGTTATCGACTTGGAG +
Preference number: 4 (lower is better)
Translates to: ARGVRHPVLCPREPRHKAELRGC*DVIDLE
Trigger: CTCCAAGTCGATAACGTCCCAGCACCCTCTGAGCTC...AGCTTTGTGCCGTGGCTCCCTGGGGCACAGTACAGGATGGCGGACTCCCCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp GCGAGGGGAGTCCGCCATCCTGTACTGTGCCCCAGGGAGCCACGGCACAAAGCTCCAGACGGCAATTCATaGCCCGGGAGAATAAGTGGC +
Preference number: 4 (lower is better)
Translates to: ARGVRHPVLCPREPRHKAPDGNS*PGRISG
Trigger: GCCACTTATTCTCCCGGGCCATGAATTGCCGTCTGG...AGCTTTGTGCCGTGGCTCCCTGGGGCACAGTACAGGATGGCGGACTCCCCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCCATTCCAGAGACCCATaGGTGCCCCTAGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSHSRDP*VPLDFC
Trigger: GCAGAAGTCTAGGGGCACCCATGGGTCTCTGGAATG...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGCTCAGAGCTTGCCCCTaGGCCACAGAACACCTGGGC +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLLRACP*ATEHLG
Trigger: GCCCAGGTGTTCTGTGGCTCAGGGGCAAGCTCTGAG...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp ATGGCTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCAAGGGTCAGCACCCGGTaGTGGAGCTGCTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: MADLVGSYEIRPGLSTSARVSTR*WSCWAR
Trigger: GCGGGCCCAGCAGCTCCATCACCGGGTGCTGACCCT...TGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp GGCCTCTACCCACCAGATGCCAGTAGCAGTGTCCCAGCTGTGACAACCAAAAATAGGGTCAGCACCCGGTaGTGGAGCTGCTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GLYPPDASSSVPAVTTKNRVSTR*WSCWAR
Trigger: GCGGGCCCAGCAGCTCCATCACCGGGTGCTGACCCT...ATTTTTGGTTGTCACAGCTGGGACACTGCTACTGGCATCTGGTGGGTAGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGATCTCCCATTGTCCTGTaGGGTCCCCGGCGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGSPIVL*GPRRQD
Trigger: ATCCTGGCGCCGGGGACCTCACAGGACAATGGGAGA...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CTGGAGCATCTGATGGGTGGCAAGGAGCCACCATGTGCCCTTCCAAATGCTGGGTCTCCCATTGTCCTGTaGGGTCCCCGGCGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LEHLMGGKEPPCALPNAGSPIVL*GPRRQD
Trigger: ATCCTGGCGCCGGGGACCTCACAGGACAATGGGAGA...CCCAGCATTTGGAAGGGCACATGGTGGCTCCTTGCCACCCATCAGATGCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR TCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCCCATTCCTTTGTGGCTaGCTTCCAGTTGTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSPFLCG*LPVVPS
Trigger: GCTTGGGACAACTGGAAGTCAGCCACAAAGGAATGG...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp TTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTGGAAGAAGACGACGGACGTCTaGGCTCCTGGGACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: FSWVAHLIRGTSLCSRWKKTTDV*APGTPG
Trigger: TCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTT...CTTCCACCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGCGGCAGAGGGGAGCATaGAGTCACAAGACGACGGAC +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHERQRGA*SHKTTD
Trigger: GTCCGTCGTCTTGTGACTTCATGCTCCCCTCTGCCG...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGAGGTCGGCTTCTCCATaGTGGGCAAGGCTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHERSASP*WARLQP
Trigger: TGGCTGGAGCCTTGCCCATCATGGAGAAGCCGACCT...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp CCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCCCAGCTGCTTCTTCCTaGAGACATTCCCGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: PGDQMWWHHAASRWLSKGPAASS*RHSRSS
Trigger: TGAGGAGCGGGAATGTCTTCAGGAAGAAGCAGCTGG...GCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCCAGGAGCTCAGAGGGTaGTGGGACGTTATCGACTTG +
Preference number: 4 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSQELRG*WDVIDL
Trigger: CAAGTCGATAACGTCCCAGCACCCTCTGAGCTCCTG...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCCAGGAGCTCAGAGGGTaGTGGGACGTTATCGACTTG +
Preference number: 4 (lower is better)
Translates to: PGDQMWWHHAASRWLSKGQELRG*WDVIDL
Trigger: CAAGTCGATAACGTCCCAGCACCCTCTGAGCTCCTG...GCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGCTGGCTGTCCTCGGCTaGACCGGGTTTCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHELAVLG*TGFLSS
Trigger: AGAGGACAGAAACCCGGTGCAGCCGAGGACAGCCAG...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTGACTTCCAGTCTGGCTGTCCTCGGCTaGACCGGGTTTCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: PTSPTGHCPAIPLWLTSSLAVLG*TGFLSS
Trigger: AGAGGACAGAAACCCGGTGCAGCCGAGGACAGCCAG...ACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp ATGGCTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCAGCCCCGGAGGATAGCTaGCCCAGGACCCGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: MADLVGSYEIRPGLSTSAAPEDS*PRTRGR
Trigger: CCTGCCTCGGGTCCTGGGGCAGCTATCCTCCGGGGC...TGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR GCA 90 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTGACTTCCAGTCAGCGGCTGCAAGGGTaGTGGACCGACATTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PTSPTGHCPAIPLWLTSSQRLQG*WTDIPE
Trigger: CTCTGGAATGTCGGTCCAGCACCCTTGCAGCCGCTG...ACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGTGGCCTGTGGGAGCCTaGGGGTCTAACCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLWPVGA*GSNRPA
Trigger: AGCTGGACGGTTAGACCCGCAGGCTCCCACAGGCCA...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGGCTGCTGACAGCTTCTaGTCGGAGGACTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHEAADSF*SEDSSC
Trigger: GCAGCTGGAGTCCTCCGAGCAGAAGCTGTCAGCAGC...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGTTGCGCTCCAGCCGCTaGACCTGCTCCCGCAGGACG +
Preference number: 4 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGLRSSR*TCSRRT
Trigger: CGTCCTGCGGGAGCAGGTGCAGCGGCTGGAGCGCAA...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCCTCCACCTGGCCCTaGAGGCCAATCTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHESSTWP*RPISDS
Trigger: GCTGTCAGAGATTGGCCTGCAGGGCCAGGTGGAGGA...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCCAGGCCAGGTCCATaGGGAGGAGTGACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHESRPGP*GGVTRP
Trigger: TGGACGAGTCACTCCTCCGCATGGACCTGGCCTGGA...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp GTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGGCACCCCAGACCGGATaGTTCTTGATGCGGCATCTC +
Preference number: 4 (lower is better)
Translates to: VLFSWVAHLIRGTSLCSRAPQTG*FLMRHL
Trigger: GAGATGCCGCATCAAGAAGCATCCGGTCTGGGGTGC...CCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGCACTGCCCCAGGTTCTaGGGAGATCTGAGACACCCA +
Preference number: 4 (lower is better)
Translates to: VLFSWVAHLIRGTSLCSRHCPRF*GDLRHP
Trigger: TGGGTGTCTCAGATCTCCGCAGAACCTGGGGCAGTG...CCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGACCCAGCACCGACCACTaGCCCAGGTTCTGCGGAGAT +
Preference number: 4 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGPSTDH*PRFCGD
Trigger: ATCTCCGCAGAACCTGGGGCAGTGGTCGGTGCTGGG...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp GGGGAGCATGAAGTCACAAGACGACGGACGTCTGAGCTCCTGGGACTCCTGGAGTCAGCGTGTCCCCACTaGCGCCACACCTCCGACATA +
Preference number: 4 (lower is better)
Translates to: GEHEVTRRRTSELLGLLESACPH*RHTSDI
Trigger: TATGTCGGAGGTGTGGCGGCAGTGGGGACACGCTGA...CTCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTTGTGACTTCATGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp GGGAGGGTTGAGCCCGACCCACAACTGGTCAGGAATCCAGTGAACATCTCCACGGGTAAGTGGCAGGGCTaGAGCCCCTCTTACCCTGCC +
Preference number: 4 (lower is better)
Translates to: GRVEPDPQLVRNPVNISTGKWQG*SPSYPA
Trigger: GGCAGGGTAAGAGGGGCTGCAGCCCTGCCACTTACC...CGTGGAGATGTTCACTGGATTCCTGACCAGTTGTGGGTCGGGCTCAACCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTGCCCGGCTGCAGGGTaGACAGCTGCTGGAAACAAG +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHECPAAG*TAAGNK
Trigger: CTTGTTTCCAGCAGCTGTCCACCCTGCAGCCGGGCA...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGGACCACTCCCGTGCAGCTGTCCTGTGAGTaGAGTCACCTGCACCTCTTT +
Preference number: 4 (lower is better)
Translates to: LKSFRRGGVGSCRWTTPVQLSCE*SHLHLF
Trigger: AAAGAGGTGCAGGTGACTCCACTCACAGGACAGCTG...CACGGGAGTGGTCCAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCCAGCTGTCCTGTGAGTaGAGTCACCTGCACCTCTTT +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSQLSCE*SHLHLF
Trigger: AAAGAGGTGCAGGTGACTCCACTCACAGGACAGCTG...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CTAGACCCAGACGGCAATTCATGGCCCGGGAGAATAAGTGGCTCTGCCTTGGAATCCAGAGACGCCTGGTaGGCAGCGCCCTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LDPDGNSWPGRISGSALESRDAW*AAPWSL
Trigger: CAGGGACCAGGGCGCTGCCCACCAGGCGTCTCTGGA...TTCCAAGGCAGAGCCACTTATTCTCCCGGGCCATGAATTGCCGTCTGGGTCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp CGTGCTGATTTACTCACAGGAGTATCTCTCCCATTGTCCTGTGAGGTCCCCGGCTCCAGAGACGCCTGGTaGGCAGCGCCCTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: RADLLTGVSLPLSCEVPGSRDAW*AAPWSL
Trigger: CAGGGACCAGGGCGCTGCCCACCAGGCGTCTCTGGA...GCCGGGGACCTCACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGGCCTGGAGCTCCTCCTaGAGGCGGGTGGCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: VPGARINIDLSLLLHATLAWSSS*RRVASS
Trigger: GGACGAGGCCACCCGCCTCCAGGAGGAGCTCCAGGC...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp TTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTGGAAGAGCTCCTGCAGCAGGTaGGTGATCAGGCGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: FSWVAHLIRGTSLCSRWKSSCSR*VIRRFL
Trigger: GAGGAACCGCCTGATCACCCACCTGCTGCAGGAGCT...CTTCCACCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGGAAGTGCTCTTCTCCTaGGTCGCCCACCTGATTCGG +
Preference number: 4 (lower is better)
Translates to: VLFSWVAHLIRGTSLCSREVLFS*VAHLIR
Trigger: CCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTC...CCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GAGGCAGGTCCTGCTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGAGGGAAGCCCTGGGGTaGTTGAACCAACAAAGGGAT +
Preference number: 4 (lower is better)
Translates to: EAGPAEELPEGRCRVLSLREALG*LNQQRD
Trigger: ATCCCTTTGTTGGTTCAACCACCCCAGGGCTTCCCT...CAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAGCAGGACCTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGCCCCAGACAGTGCGGTaGCTGCCGATCCCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHEPQTVR*LPIPWF
Trigger: AAACCAAGGGATCGGCAGCCACCGCACTGTCTGGGG...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCGGGACAGTCATGCTCTaGGACTTTTGCCGTGTCACA +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSGTVML*DFCRVT
Trigger: TGTGACACGGCAAAAGTCCCAGAGCATGACTGTCCC...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCGTGTGGCCTGGTTGGTaGTCATGTCTGCTCTATCAG +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSVWPGW*SCLLYQ
Trigger: CTGATAGAGCAGACATGACCACCAACCAGGCCACAC...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTGACTTCCAGTAGCTCCATCCAGGGGTaGCCTCCCAAGGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: PTSPTGHCPAIPLWLTSSSSIQG*PPKAGR
Trigger: TCTTCCTGCCTTGGGAGGCCACCCCTGGATGGAGCT...ACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GGGGAGCATGAAGTCACAAGACGACGGACGTCTGAGCTCCTGGGACTCCTGGAGGCAGGTGGCTTCTTCTaGAGATGCCTCCACCCCACC +
Preference number: 4 (lower is better)
Translates to: GEHEVTRRRTSELLGLLEAGGFF*RCLHPT
Trigger: GGTGGGGTGGAGGCATCTCCAGAAGAAGCCACCTGC...CTCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTTGTGACTTCATGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCCATCCTGTGAGCAGGTaGCTTCTTCTGGAGATGCCT +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSHPVSR*LLLEMP
Trigger: AGGCATCTCCAGAAGAAGCCACCTGCTCACAGGATG...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGGAGGATGGCCCGGCCTaGCCTTCAGCCGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMEDGPA*PSAGSS
Trigger: GGAAGAGCCGGCTGAAGGCCAGGCCGGGCCATCCTC...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGGTGAGCAGCCCTCCCTaGCTGGCAGGGCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGVSSPP*LAGPLL
Trigger: CAGAAGGGGCCCTGCCAGCCAGGGAGGGCTGCTCAC...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGAGGAAGAGGCCGGGCTaGCAGGGACAAATGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHERKRPG*QGQMGL
Trigger: CAGACCCATTTGTCCCTGCCAGCCCGGCCTCTTCCT...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCACCCATATCCATGTCTaGGCGGCCAGCTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSTHIHV*AASCFF
Trigger: GAAGAAGCAGCTGGCCGCCCAGACATGGATATGGGT...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTGACTTCCAGTTCCTCTCGCAGGCACTaGTTTTGCTGGGCGAGGTCC +
Preference number: 4 (lower is better)
Translates to: PTSPTGHCPAIPLWLTSSSSRRH*FCWARS
Trigger: GGACCTCGCCCAGCAAAACCAGTGCCTGCGAGAGGA...ACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp TTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTGGAAGATCCGGCCAGGTCTCTaGGGAGCTCGCTTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: FSWVAHLIRGTSLCSRWKIRPGL*GARLWS
Trigger: AGACCACAAGCGAGCTCCCCAGAGACCTGGCCGGAT...CTTCCACCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGGAGCCCTGGAGAAGGTaGCTGGGGGTGCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLEPWRR*LGVPLP
Trigger: AGGAAGTGGCACCCCCAGCCACCTTCTCCAGGGCTC...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GAGGCAGGTCCTGCTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGTTGGCCATGGCTCTTTaGTCTCATGAGCCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: EAGPAEELPEGRCRVLSLLAMAL*SHEPWR
Trigger: TCTCCAGGGCTCATGAGACCAAAGAGCCATGGCCAA...CAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAGCAGGACCTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp CTGGAGCATCTGATGGGTGGCAAGGAGCCACCATGTGCCCTTCCAAATGCTGGGCCCCAGGGCCTACTGTaGTGCCTGGCGCTTAGTGGT +
Preference number: 4 (lower is better)
Translates to: LEHLMGGKEPPCALPNAGPQGLL*CLALSG
Trigger: ACCACTAAGCGCCAGGCACCACAGTAGGCCCTGGGG...CCCAGCATTTGGAAGGGCACATGGTGGCTCCTTGCCACCCATCAGATGCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 72 bp AGACTTACGCGGAAGCCCACCCACCAGGGCAGCAATTaGGCCTACTCTGTTCTCTCCCAGAACCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RLTRKPTHQGSN*AYSVLSQNPRA
Trigger: GGCCCTGGGGTTCTGGGAGAGAACAGAGTAGGCCAAATTGCTGCCCTGGTGGGTGGGCTTCCGCGTAAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGCCAGTGCCACGTCGTTaGGCATGTTCTGCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLPVPRR*ACSAPA
Trigger: AGCTGGCGCAGAACATGCTCAACGACGTGGCACTGG...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGGACATCTCTGGTGGGTaGGCCTGGGTCAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQDISGG*AWVRVW
Trigger: CCAGACCCTGACCCAGGCTCACCCACCAGAGATGTC...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp GTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGAAGCCCTGGGGTGGTTaGACCAACAAAGGGATCACC +
Preference number: 4 (lower is better)
Translates to: VLFSWVAHLIRGTSLCSRKPWGG*TNKGIT
Trigger: GGTGATCCCTTTGTTGGTTCAACCACCCCAGGGCTT...CCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp GGGAGGGTTGAGCCCGACCCACAACTGGTCAGGAATCCAGTGAACATCTCCACGTGGACCACTCCCGTGTaGACCAAGGCAGCTCACTCC +
Preference number: 4 (lower is better)
Translates to: GRVEPDPQLVRNPVNISTWTTPV*TKAAHS
Trigger: GGAGTGAGCTGCCTTGGTTCACACGGGAGTGGTCCA...CGTGGAGATGTTCACTGGATTCCTGACCAGTTGTGGGTCGGGCTCAACCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR TCA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCGAGGCAGGTCCTGCTaGAGAGCTTCCGGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMRGRSC*RASGGE
Trigger: CTCCCCTCCGGAAGCTCTTCAGCAGGACCTGCCTCG...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR TCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGATCACACCTACAAGAGTaGCAGAGCCCTCGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGSHLQE*QSPRPP
Trigger: GGGAGGCCGAGGGCTCTGTCACTCTTGTAGGTGTGA...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGGGGAGAGGCATCCTGTaGGCAGGTGGCTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLGRGIL*AGGFFW
Trigger: CCAGAAGAAGCCACCTGCTCACAGGATGCCTCTCCC...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTGACTTCCAGTGTAAGTCACAGAGGCTaGGCCAGTGGGTGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: PTSPTGHCPAIPLWLTSSVSHRG*ASGCFG
Trigger: CCCAAAGCACCCACTGGCTCAGCCTCTGTGACTTAC...ACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp TTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTGGAAGACTCCAGCTGCCTCCTaGGCGCACCCATATCCATGT +
Preference number: 4 (lower is better)
Translates to: FSWVAHLIRGTSLCSRWKTPAAS*AHPYPC
Trigger: ACATGGATATGGGTGCGCTCAGGAGGCAGCTGGAGT...CTTCCACCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGGCATCCAGGCTGCAGTaGCCAATAGGGGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQASRLQ*PIGAWA
Trigger: AGCCCAGGCCCCTATTGGTCACTGCAGCCTGGATGC...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCCAGAAATGGGTGATTTaGAATGTAGGGGGCCTCGTG +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSQKWVI*NVGGLV
Trigger: CACGAGGCCCCCTACATTTCAAATCACCCATTTCTG...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGATTCCCTGCGAGGAGCTaGCTGTCTGTTGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGFPARS*LSVGHG
Trigger: GCCATGGCCAACAGACAGTCAGCTCCTCGCAGGGAA...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAGACCGGATGCTTCTTaGTGCGGCATCTCATCCTCT +
Preference number: 4 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSRPDAS*CGISSS
Trigger: AGAGGATGAGATGCCGCATCAAGAAGCATCCGGTCT...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCAAACATGTGGCTCACTaGCGTTTCCCCGCTCAACAG +
Preference number: 4 (lower is better)
Translates to: PGDQMWWHHAASRWLSKGKHVAH*RFPAQQ
Trigger: CTGTTGAGCGGGGAAACGTCAGTGAGCCACATGTTT...GCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCACAGACAGCAACAGATaGGCCTTCCAGGTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSTDSNR*AFQVKP
Trigger: TGGCTTTACCTGGAAGGCTCATCTGTTGCTGTCTGT...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp CTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGGACCACTCCCGTGCATGGAATTGTGCAGTaGCCAGTCACCAAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: LKSFRRGGVGSCRWTTPVHGIVQ*PVTKSS
Trigger: TGAGCTCTTGGTGACTGGTCACTGCACAATTCCATG...CACGGGAGTGGTCCAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp GGGGAGCATGAAGTCACAAGACGACGGACGTCTGAGCTCCTGGGACTCCTGGAGTGCAGGGTGGACAGCTaGTGGAAACAAGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: GEHEVTRRRTSELLGLLECRVDS*WKQAST
Trigger: CGTGGAGGCTTGTTTCCAGCAGCTGTCCACCCTGCA...CTCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTTGTGACTTCATGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGCAGGAACTTCGCTGGTaGCCAGGGCCGTGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLQELRW*PGPWSF
Trigger: GAAAGACCACGGCCCTGGGCACCAGCGAAGTTCCTG...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGCCAGGACATGGACCCTaGGTAGAAGGTGCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: VLFSWVAHLIRGTSLCSRPGHGP*VEGARS
Trigger: AGAACGAGCACCTTCTACGCAGGGTCCATGTCCTGG...CCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTGACTTCCAGTTGTCTGTGCAGCTCCTaGAGCAGGTGGGTGATCAGG +
Preference number: 4 (lower is better)
Translates to: PTSPTGHCPAIPLWLTSSCLCSS*SRWVIR
Trigger: CCTGATCACCCACCTGCTGCAGGAGCTGCACAGACA...ACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTGACTTCCAGTTTCCACAGTGACCGCTaGCAGGCACGTTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: PTSPTGHCPAIPLWLTSSFHSDR*QARSRI
Trigger: GATCCTGGAACGTGCCTGGCAGCGGTCACTGTGGAA...ACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GAGGCAGGTCCTGCTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGATTCCGCCTTTTTCTTaGAGACGTTGTGCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: EAGPAEELPEGRCRVLSLIPPFS*RRCAGR
Trigger: TCTCCCCGCACAACGTCTGCAAGAAAAAGGCGGAAT...CAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAGCAGGACCTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR GCA 90 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTGACTTCCAGTTCACCCACCGGACACTaGCCAGCCATTCCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: PTSPTGHCPAIPLWLTSSSPTGH*PAIPLW
Trigger: CCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGA...ACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCGGATCACCAAACCAGTaGTGCAGGTCACTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PGDQMWWHHAASRWLSKGGSPNQ*CRSLPA
Trigger: AGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCC...GCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGACTGGCTGTCCTCGGCTaGACCGGGTTTCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGLAVLG*TGFLSS
Trigger: AGAGGACAGAAACCCGGTGCAGCCGAGGACAGCCAG...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCGCCATCCTGTACTGTaGCCCAGGGAGCCACGGCAC +
Preference number: 4 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMRHPVL*PREPRH
Trigger: GTGCCGTGGCTCCCTGGGGCACAGTACAGGATGGCG...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR GCA 90 bp GAGTCCGCCATCCTGTACTGTGCCCCAGGGAGCCACGGCACAAAGCTTGAGCCGATGTGCCCTTCCAAATaGTGGGGTCTACAGACCAGG +
Preference number: 4 (lower is better)
Translates to: ESAILYCAPGSHGTKLEPMCPSK*WGLQTR
Trigger: CCTGGTCTGTAGACCCCAGCATTTGGAAGGGCACAT...CGGCTCAAGCTTTGTGCCGTGGCTCCCTGGGGCACAGTACAGGATGGCGGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR GCA 90 bp GGGGAGCATGAAGTCACAAGACGACGGACGTCTGAGCTCCTGGGACTCCTGGAGCCCTCTCTCTCTGGCTaGCAGCTGCTACATCCAGCT +
Preference number: 4 (lower is better)
Translates to: GEHEVTRRRTSELLGLLEPSLSG*QLLHPA
Trigger: AGCTGGATGTAGCAGCTGGCAGCCAGAGAGAGAGGG...CTCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTTGTGACTTCATGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGGGCTTCTTCTGGAGATaGCTCCACCCCACCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLGFFWR*LHPTQP
Trigger: AGGCTGGGTGGGGTGGAGGCATCTCCAGAAGAAGCC...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGCTGAGCCCGTCCACCTaGAGCCAGCTGAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGLSPST*SQLRMA
Trigger: GGCCATCCTCAGCTGGCTGCAGGTGGACGGGCTCAG...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp TTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTGGAAGGCTTCAGCCCATAGATaGAGCAGCGCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: FSWVAHLIRGTSLCSRWKASAHR*SSAAPP
Trigger: TGGAGGAGCTGCGCTGCTGCATCTATGGGCTGAAGC...CTTCCACCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp GGGGAGCATGAAGTCACAAGACGACGGACGTCTGAGCTCCTGGGACTCCTGGAGGGCCCTTTGTCTGGGTaGATCATTGGACCGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GEHEVTRRRTSELLGLLEGPLSG*IIGPQG
Trigger: TCCCTGCGGTCCAATGATGCACCCAGACAAAGGGCC...CTCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTTGTGACTTCATGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGATCTGGCCCAAGGGCTaGCAGTACCCGCTGTGGACT +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLIWPKG*QYPLWT
Trigger: AGTCCACAGCGGGTACTGGCAGCCCTTGGGCCAGAT...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp CTGGAGCATCTGATGGGTGGCAAGGAGCCACCATGTGCCCTTCCAAATGCTGGGTGCCCGGCTGCAGGGTaGACAGCTGCTGGAAACAAG +
Preference number: 4 (lower is better)
Translates to: LEHLMGGKEPPCALPNAGCPAAG*TAAGNK
Trigger: CTTGTTTCCAGCAGCTGTCCACCCTGCAGCCGGGCA...CCCAGCATTTGGAAGGGCACATGGTGGCTCCTTGCCACCCATCAGATGCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGTACCAGGAACTTCGCTaGTGCCCAGGGCCGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLYQELR*CPGPWS
Trigger: AGACCACGGCCCTGGGCACCAGCGAAGTTCCTGGTA...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CAGAGGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTACCAGGAACTTCGCTaGTGCCCAGGGCCGTGGTCT +
Preference number: 4 (lower is better)
Translates to: QREAEGGSPNQCCRSLPAYQELR*CPGPWS
Trigger: AGACCACGGCCCTGGGCACCAGCGAAGTTCCTGGTA...AGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCATGAGGCAGTGTCCCTaGGTTACCAGGAACTTCGCT +
Preference number: 4 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSMRQCP*VTRNFA
Trigger: AGCGAAGTTCCTGGTAACCCAGGGACACTGCCTCAT...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GCGAGGGGAGTCCGCCATCCTGTACTGTGCCCCAGGGAGCCACGGCACAAAGCTGTGGCTTTCTGGAGTTaGCCCAGATTCCCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: ARGVRHPVLCPREPRHKAVAFWS*PRFPFS
Trigger: ACTGAAAGGGAATCTGGGCCAACTCCAGAAAGCCAC...AGCTTTGTGCCGTGGCTCCCTGGGGCACAGTACAGGATGGCGGACTCCCCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCTCAGACGTGGCTTTCTaGAGTTGGCCCAGATTCCCT +
Preference number: 4 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSSDVAF*SWPRFP
Trigger: AGGGAATCTGGGCCAACTCCAGAAAGCCACGTCTGA...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTGACTTCCAGTAATTCCCGGTGCCTGTaGAAGGTCCTGTCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: PTSPTGHCPAIPLWLTSSNSRCL*KVLSAL
Trigger: CAGGGCAGACAGGACCTTCCACAGGCACCGGGAATT...ACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGGAGCATGAAGTCACAAGACGACGGACGTCTGAGCTCCTGGGACTCCTGGAGAATCAGCACCGCGTCTaGAATTCCCGGTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GEHEVTRRRTSELLGLLENQHRV*NSRCLW
Trigger: CCACAGGCACCGGGAATTCCAGACGCGGTGCTGATT...CTCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTTGTGACTTCATGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCGAGCCACAGAACACCTaGGCCTCTTCTCCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSEPQNT*ASSPLS
Trigger: AGAAAGAGGAGAAGAGGCCCAGGTGTTCTGTGGCTC...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGCTGAGTCCCGGAGCATaGGGCCATTGCTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQLSPGA*GHCSGS
Trigger: GCTCCCTGAGCAATGGCCCCATGCTCCGGGACTCAG...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CAGACGCTAGGTTGCCTGACATGGCCTGTGCTTTTAGTAACACCCCTTCCCATCTCCAGAGACGCCTGGTaGGCAGCGCCCTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: QTLGCLTWPVLLVTPLPISRDAW*AAPWSL
Trigger: CAGGGACCAGGGCGCTGCCCACCAGGCGTCTCTGGA...GATGGGAAGGGGTGTTACTAAAAGCACAGGCCATGTCAGGCAACCTAGCGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp GGCCTCTACCCACCAGATGCCAGTAGCAGTGTCCCAGCTGTGACAACCAAAAATTCGTCCAGAGACGCCTaGTGGGCAGCGCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: GLYPPDASSSVPAVTTKNSSRDA*WAAPWS
Trigger: GGACCAGGGCGCTGCCCACCAGGCGTCTCTGGACGA...ATTTTTGGTTGTCACAGCTGGGACACTGCTACTGGCATCTGGTGGGTAGAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CACCATGTGCCCTTCCAAATGCTGGGGTCTACAGACCAGGCGAGGGGAGTCCGCCGAGGGAAGCTATCTTaGCCTTCAGGGGAGTCACTG +
Preference number: 4 (lower is better)
Translates to: HHVPFQMLGSTDQARGVRRGKLS*PSGESL
Trigger: CAGTGACTCCCCTGAAGGCCAAGATAGCTTCCCTCG...GCGGACTCCCCTCGCCTGGTCTGTAGACCCCAGCATTTGGAAGGGCACATGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGAGCTCCTGCAGCAGGTaGGTGATCAGGCGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLSSCSR*VIRRFL
Trigger: GAGGAACCGCCTGATCACCCACCTGCTGCAGGAGCT...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTGACTTCCAGTTTGACGTCCAGGTGGTaGCTTGTCTCTGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: PTSPTGHCPAIPLWLTSSLTSRW*LVSGTP
Trigger: GGGAGTCCCAGAGACAAGCCACCACCTGGACGTCAA...ACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CACCATGTGCCCTTCCAAATGCTGGGGTCTACAGACCAGGCGAGGGGAGTCCGCGACTTGACGTCCAGGTaGTGGCTTGTCTCTGGGACT +
Preference number: 4 (lower is better)
Translates to: HHVPFQMLGSTDQARGVRDLTSR*WLVSGT
Trigger: AGTCCCAGAGACAAGCCACCACCTGGACGTCAAGTC...GCGGACTCCCCTCGCCTGGTCTGTAGACCCCAGCATTTGGAAGGGCACATGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp CTGGAGCATCTGATGGGTGGCAAGGAGCCACCATGTGCCCTTCCAAATGCTGGGTTGGGCTGTCTGTGCTaGCCACTCCGGCTCGGGAAT +
Preference number: 4 (lower is better)
Translates to: LEHLMGGKEPPCALPNAGLGCLC*PLRLGN
Trigger: ATTCCCGAGCCGGAGTGGCCAGCACAGACAGCCCAA...CCCAGCATTTGGAAGGGCACATGGTGGCTCCTTGCCACCCATCAGATGCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGATTGTGCGGGGAGACCTaGTTCCACAGTGACCGCTGC +
Preference number: 4 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGLCGET*FHSDRC
Trigger: GCAGCGGTCACTGTGGAACCAGGTCTCCCCGCACAA...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGAGCCAGGATCCTTGCTaGGCTCAGGAGCTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLSQDPC*AQELRG
Trigger: CCCTCTGAGCTCCTGAGCCCAGCAAGGATCCTGGCT...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp TTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTGGAAGGGAAGGGGTGCTGGATaGGAACGATGCAGTGACTGC +
Preference number: 4 (lower is better)
Translates to: FSWVAHLIRGTSLCSRWKGRGAG*ERCSDC
Trigger: GCAGTCACTGCATCGTTCCCATCCAGCACCCCTTCC...CTTCCACCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCCCTAGACTCTCTTTTTaGGGGGCTGCCCTCAGGATA +
Preference number: 4 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSPRLSF*GAALRI
Trigger: TATCCTGAGGGCAGCCCCCCAAAAAGAGAGTCTAGG...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CAGGAATCCAGTGAACATCTCCACGGACTGATGGTTTCACTGCAGGCAGGCCCCGCCTGGGTCAGGGTCTaGTGTGTGTCGTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: QESSEHLHGLMVSLQAGPAWVRV*CVSSKP
Trigger: GGGCTTGGACGACACACACCAGACCCTGACCCAGGC...GGGGCCTGCCTGCAGTGAAACCATCAGTCCGTGGAGATGTTCACTGGATTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGAGGGTTGAGCCCGACCCACAACTGGTCAGGAATCCAGTGAACATCTCCACGGGAGACCAGATGTGGTaGCACCACGCTGCATCTCGC +
Preference number: 4 (lower is better)
Translates to: GRVEPDPQLVRNPVNISTGDQMW*HHAASR
Trigger: GCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCC...CGTGGAGATGTTCACTGGATTCCTGACCAGTTGTGGGTCGGGCTCAACCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGGAGCATGAAGTCACAAGACGACGGACGTCTGAGCTCCTGGGACTCCTGGAGGGACGTCTGAGCTCCTaGGACTCCTGGAGACCAGAT +
Preference number: 4 (lower is better)
Translates to: GEHEVTRRRTSELLGLLEGRLSS*DSWRPD
Trigger: ATCTGGTCTCCAGGAGTCCCAGGAGCTCAGACGTCC...CTCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTTGTGACTTCATGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGATGCACACTGCGGACTaGGGAGGCATCTGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQMHTAD*GGIWRG
Trigger: CCCACGCCAGATGCCTCCCCAGTCCGCAGTGTGCAT...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp CGTGCTGATTTACTCACAGGAGTATCTCTCCCATTGTCCTGTGAGGTCCCCGGCCTCTCCTGGGCCACGTaGGTGCTCAGCTGGTCCACC +
Preference number: 4 (lower is better)
Translates to: RADLLTGVSLPLSCEVPGLSWAT*VLSWST
Trigger: GGTGGACCAGCTGAGCACCCACGTGGCCCAGGAGAG...GCCGGGGACCTCACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GCGAGGGGAGTCCGCCATCCTGTACTGTGCCCCAGGGAGCCACGGCACAAAGCTGTCTGTAATGTGATATaGGGCCTGCCTGTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: ARGVRHPVLCPREPRHKAVCNVI*GLPVAH
Trigger: GTGAGCAACAGGCAGGCCCCATATCACATTACAGAC...AGCTTTGTGCCGTGGCTCCCTGGGGCACAGTACAGGATGGCGGACTCCCCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp CTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGGACCACTCCCGTGGCCCCATGGCACGGTTaGAGAATACTGCATAATGAC +
Preference number: 4 (lower is better)
Translates to: LKSFRRGGVGSCRWTTPVAPWHG*RILHND
Trigger: GTCATTATGCAGTATTCTCCAACCGTGCCATGGGGC...CACGGGAGTGGTCCAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 72 bp TCCTGTACTGTGCCCCAGGGAGCCACGGCACAAAGCTaGAGCCGACCCAAAGTGCTAGACCCAGACGGCAAT +
Preference number: 4 (lower is better)
Translates to: SCTVPQGATAQS*SRPKVLDPDGN
Trigger: ATTGCCGTCTGGGTCTAGCACTTTGGGTCGGCTCAAGCTTTGTGCCGTGGCTCCCTGGGGCACAGTACAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR TCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCTGTCTTTGGATTTCCTaGCACTCTCAGACGTGGCTT +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSCLWIS*HSQTWL
Trigger: AAGCCACGTCTGAGAGTGTCAGGAAATCCAAAGACA...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTGACTTCCAGTAAAGCAGCTGTCCTGTaGGTGGAGTCACCTGCACCT +
Preference number: 4 (lower is better)
Translates to: PTSPTGHCPAIPLWLTSSKAAVL*VESPAP
Trigger: AGGTGCAGGTGACTCCACTCACAGGACAGCTGCTTT...ACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CAGACGCTAGGTTGCCTGACATGGCCTGTGCTTTTAGTAACACCCCTTCCCATCAGTAACCTCGGCCTCTaGGTCCCGGAGCATGGGGCC +
Preference number: 4 (lower is better)
Translates to: QTLGCLTWPVLLVTPLPISNLGL*VPEHGA
Trigger: GGCCCCATGCTCCGGGACTCAGAGGCCGAGGTTACT...GATGGGAAGGGGTGTTACTAAAAGCACAGGCCATGTCAGGCAACCTAGCGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp GGCCTCTACCCACCAGATGCCAGTAGCAGTGTCCCAGCTGTGACAACCAAAAATCCTGCAGCAGGTGGGTaGTCAGGCGGTTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GLYPPDASSSVPAVTTKNPAAGG*SGGSSP
Trigger: GGGAGAGGAACCGCCTGATCACCCACCTGCTGCAGG...ATTTTTGGTTGTCACAGCTGGGACACTGCTACTGGCATCTGGTGGGTAGAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGGACCTGGTTCCACAGTaGCCGCTGCCAGGCACGTTC +
Preference number: 4 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGDLVPQ*PLPGTF
Trigger: GAACGTGCCTGGCAGCGGTCACTGTGGAACCAGGTC...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCCGCCAGGATCAACATTaGCTTGTCTCTTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSRQDQH*LVSSPS
Trigger: TGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCG...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTGCTTGCAGCTGGCTTaGCAAGAGCATGCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHECLQLA*QEHALP
Trigger: GGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCA...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp GGGGAGCATGAAGTCACAAGACGACGGACGTCTGAGCTCCTGGGACTCCTGGAGTGCTTGCAGCTGGCTTaGCAAGAGCATGCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: GEHEVTRRRTSELLGLLECLQLA*QEHALP
Trigger: GGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCA...CTCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTTGTGACTTCATGCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp TTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTGGAAGATGGGAACGATGCAGTaGCTGCTTGCAGCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: FSWVAHLIRGTSLCSRWKMGTMQ*LLAAGL
Trigger: CAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCAT...CTTCCACCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp GGGGAGCATGAAGTCACAAGACGACGGACGTCTGAGCTCCTGGGACTCCTGGAGATGGGAACGATGCAGTaGCTGCTTGCAGCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GEHEVTRRRTSELLGLLEMGTMQ*LLAAGL
Trigger: CAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCAT...CTCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTTGTGACTTCATGCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTGACTTCCAGTAAGCCCTGGGGTGGTTaGACCAACAAAGGGATCACC +
Preference number: 4 (lower is better)
Translates to: PTSPTGHCPAIPLWLTSSKPWGG*TNKGIT
Trigger: GGTGATCCCTTTGTTGGTTCAACCACCCCAGGGCTT...ACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp TACCAAAGTGAACCTACTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGCATCTGAAGACGACGGACGTCTaGGCTCCTGGGACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: YQSEPTGLPEQVLPLEHLKTTDV*APGTPG
Trigger: TCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTT...CAGATGCTCCAGGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCACTTTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324058.9
CDS-3UTR TCA 90 bp CGTGCTGATTTACTCACAGGAGTATCTCTCCCATTGTCCTGTGAGGTCCCCGGCGGGGACAAGCAGGTATaGGGACCGCACTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RADLLTGVSLPLSCEVPGGDKQV*GPHSCS
Trigger: GCTGCAGGAGTGCGGTCCTCATACCTGCTTGTCCCC...GCCGGGGACCTCACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp TTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTGGAAGGCCATTTTGGTCGCATaGTCTGAGTGGGAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: FSWVAHLIRGTSLCSRWKAILVA*SEWESP
Trigger: TGGGCTCTCCCACTCAGATCATGCGACCAAAATGGC...CTTCCACCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGGGCTCTTTGGTCTCATaGGCCCTGGAGAAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLGSLVS*ALEKVA
Trigger: AGCCACCTTCTCCAGGGCTCATGAGACCAAAGAGCC...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CACCATGTGCCCTTCCAAATGCTGGGGTCTACAGACCAGGCGAGGGGAGTCCGCCAGAGCAAAAGGAGCTaGAATGAGGCTGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: HHVPFQMLGSTDQARGVRQSKRS*NEAACL
Trigger: CAGGCATGCAGCCTCATTTCAGCTCCTTTTGCTCTG...GCGGACTCCCCTCGCCTGGTCTGTAGACCCCAGCATTTGGAAGGGCACATGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCGTGAATGAAACCTGGTaGCTGACAAACCTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSVNETW*LTNLSG
Trigger: CCCACTGAGGTTTGTCAGTCACCAGGTTTCATTCAC...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp GTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGACCCTGCGTAGAAGGTaGTCGTTCTCCCCACTTAAG +
Preference number: 4 (lower is better)
Translates to: VLFSWVAHLIRGTSLCSRTLRRR*SFSPLK
Trigger: CTTAAGTGGGGAGAACGAGCACCTTCTACGCAGGGT...CCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CACCATGTGCCCTTCCAAATGCTGGGGTCTACAGACCAGGCGAGGGGAGTCCGCACCCTGCGTAGAAGGTaGTCGTTCTCCCCACTTAAG +
Preference number: 4 (lower is better)
Translates to: HHVPFQMLGSTDQARGVRTLRRR*SFSPLK
Trigger: CTTAAGTGGGGAGAACGAGCACCTTCTACGCAGGGT...GCGGACTCCCCTCGCCTGGTCTGTAGACCCCAGCATTTGGAAGGGCACATGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR GCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGTCGTTGAGCATGTTCTaGGCCAGCTCGGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLSLSMF*ASSESR
Trigger: CCTGCTCTCCGAGCTGGCGCAGAACATGCTCAACGA...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGCAGTTGGGCTGTCTGTaGTGGCCACTCCGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: VPGARINIDLSLLLHATLQLGCL*WPLRLG
Trigger: CCCGAGCCGGAGTGGCCAGCACAGACAGCCCAACTG...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp TTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTGGAAGCGGGCTGTAATTCTTTaGTGTAGGAGGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FSWVAHLIRGTSLCSRWKRAVIL*CRRLAW
Trigger: CCAGGCCAGCCTCCTACAGCAAAGAATTACAGCCCG...CTTCCACCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GGGGAGCATGAAGTCACAAGACGACGGACGTCTGAGCTCCTGGGACTCCTGGAGAATCCCCATCGTCCCTaGAGAGTCCTTACGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GEHEVTRRRTSELLGLLENPHRP*RVLTAW
Trigger: CCAAGCCGTAAGGACTCTGCAGGGACGATGGGGATT...CTCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTTGTGACTTCATGCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGGGGTCCAGCTGGACATaGACACTGCGGACTGGGGAG +
Preference number: 4 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGGSSWT*TLRTGE
Trigger: CTCCCCAGTCCGCAGTGTGCATGTCCAGCTGGACCC...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGAGCAGACACAGACACTaGCCTTCACCCGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHESRHRH*PSPAEG
Trigger: TCCTTCAGCGGGTGAAGGGCAGTGTCTGTGTCTGCT...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp GCTGCAAAGGTCGTCTTGGCTTGCTTTAATGGATTTCCTGGGTTGCCTTTCTGCCGCTCTGCCCTCGCCTaGAGGGCGCGCAGTTCCGCA +
Preference number: 4 (lower is better)
Translates to: AAKVVLACFNGFPGLPFCRSALA*RARSSA
Trigger: TGCGGAACTGCGCGCCCTGCAGGCGAGGGCAGAGCG...GCAGAAAGGCAACCCAGGAAATCCATTAAAGCAAGCCAAGACGACCTTTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGGCCAGTCTTGGCTTCTaGAGGGGTCCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGASLGF*RGPGPP
Trigger: AGGAGGCCCTGGACCCCTGCAGAAGCCAAGACTGGC...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGAATCCTGCACGTCCTCTaGAGCTCCAGCCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGILHVL*SSSPIL
Trigger: GAGAATGGGGCTGGAGCTGCAGAGGACGTGCAGGAT...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCACCTGTTGTGTCCTTTaGTCACAGCCTGTGGATGAC +
Preference number: 4 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSTCCVL*SQPVDD
Trigger: GTCATCCACAGGCTGTGAGCAAAGGACACAACAGGT...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCACTGGATGGGGCCTGCCTGTTaGTCACCCAGCACCGACCAC +
Preference number: 4 (lower is better)
Translates to: LILLGAMRSVLDSRPQHWMGPAC*SPSTDH
Trigger: GTGGTCGGTGCTGGGTGAGCAACAGGCAGGCCCCAT...CCAGTGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCTTCCCCAGGGCGAAATaGAGGCATGAATTCCACACA +
Preference number: 4 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSFPRAK*RHEFHT
Trigger: TGTGTGGAATTCATGCCTGCATTTCGCCCTGGGGAA...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp TTCCTGCCTGAACCTACTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGCATCTGCTCATGCCTCTTCCCTaGCTCACCTGCAAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: FLPEPTGLPEQVLPLEHLLMPLP*LTCKSW
Trigger: CCAGCTTTTGCAGGTGAGGCAGGGAAGAGGCATGAG...CAGATGCTCCAGGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCAGGCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGAGGGTTGAGCCCGACCCACAACTGGTCAGGAATCCAGTGAACATCTCCACGTCCCTCTCCAGGACATaGACCCTGCGTAGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: GRVEPDPQLVRNPVNISTSLSRT*TLRRRC
Trigger: GCACCTTCTACGCAGGGTCCATGTCCTGGAGAGGGA...CGTGGAGATGTTCACTGGATTCCTGACCAGTTGTGGGTCGGGCTCAACCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp CTGGAGCATCTGATGGGTGGCAAGGAGCCACCATGTGCCCTTCCAAATGCTGGGAATTCCCGGTGCCTGTaGAAGGTCCTGTCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: LEHLMGGKEPPCALPNAGNSRCL*KVLSAL
Trigger: CAGGGCAGACAGGACCTTCCACAGGCACCGGGAATT...CCCAGCATTTGGAAGGGCACATGGTGGCTCCTTGCCACCCATCAGATGCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp CAGAGGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTCTCCAGACCAGCGATaGAGGGGGAGAATCAGCACC +
Preference number: 4 (lower is better)
Translates to: QREAEGGSPNQCCRSLPASPDQR*RGRIST
Trigger: GGTGCTGATTCTCCCCCTCCATCGCTGGTCTGGAGA...AGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCACTGGCTGAGTCCCGGAGCATaGGGCCATTGCTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LILLGAMRSVLDSRPQHWLSPGA*GHCSGS
Trigger: GCTCCCTGAGCAATGGCCCCATGCTCCGGGACTCAG...CCAGTGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp TACCAAAGTGAACCTACTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGCATCTGAGCTCCTGCAGCAGGTaGGTGATCAGGCGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: YQSEPTGLPEQVLPLEHLSSCSR*VIRRFL
Trigger: GAGGAACCGCCTGATCACCCACCTGCTGCAGGAGCT...CAGATGCTCCAGGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCACTTTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324058.9
CDS-3UTR CCA 90 bp GTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTTCAGAGAATCCAGTTaGGCTGTCTGTGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: VLFSWVAHLIRGTSLCSRFRESS*AVCAGH
Trigger: GTGGCCAGCACAGACAGCCCAACTGGATTCTCTGAA...CCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTTCCAGGATCAAGCGTaGACACCAAGGACAGAGGGA +
Preference number: 4 (lower is better)
Translates to: VLFSWVAHLIRGTSLCSRFQDQA*TPRTEG
Trigger: TCCCTCTGTCCTTGGTGTCCACGCTTGATCCTGGAA...CCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCTCCAGCGGTGATTTATaGACCTGGGAATTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSSSGDL*TWELLQ
Trigger: TTGCAGCAATTCCCAGGTCCATAAATCACCGCTGGA...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCTCATGCCACATTGCCTaGCATCCAGTGGATATCAAC +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSSCHIA*HPVDIN
Trigger: GTTGATATCCACTGGATGCCAGGCAATGTGGCATGA...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCACTGGGCCTGGGTCAGGGTCTaGTGTGTGTCGTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: LILLGAMRSVLDSRPQHWAWVRV*CVSSKP
Trigger: GGGCTTGGACGACACACACCAGACCCTGACCCAGGC...CCAGTGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CTGGAGCATCTGATGGGTGGCAAGGAGCCACCATGTGCCCTTCCAAATGCTGGGCCTGGAGACCAGATGTaGTGGCACCACGCTGCATCT +
Preference number: 4 (lower is better)
Translates to: LEHLMGGKEPPCALPNAGPGDQM*WHHAAS
Trigger: AGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGG...CCCAGCATTTGGAAGGGCACATGGTGGCTCCTTGCCACCCATCAGATGCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGAGGACGTCTGAGCTCCTaGGACTCCTGGAGACCAGAT +
Preference number: 4 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGGRLSS*DSWRPD
Trigger: ATCTGGTCTCCAGGAGTCCCAGGAGCTCAGACGTCC...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGCCAGCCGGGTCCAGCTaGACATGCACACTGCGGACT +
Preference number: 4 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGPAGSS*TCTLRT
Trigger: AGTCCGCAGTGTGCATGTCCAGCTGGACCCGGCTGG...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGTGGGGAATTTCCTCCTaGGCTGACCATCCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLWGISS*ADHPQL
Trigger: CAGCTGGGGATGGTCAGCCCAGGAGGAAATTCCCCA...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp CGTGCTGATTTACTCACAGGAGTATCTCTCCCATTGTCCTGTGAGGTCCCCGGCAGCTTCTCCTGGGCCTaGAGCCAGGCGCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: RADLLTGVSLPLSCEVPGSFSWA*SQALLS
Trigger: GGAGAGAAGCGCCTGGCTCCAGGCCCAGGAGAAGCT...GCCGGGGACCTCACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGAGTGACAATCCCAGCCTaGGTGTCCTGTGGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGVTIPA*VSCGFG
Trigger: CCCAAAGCCACAGGACACCCAGGCTGGGATTGTCAC...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp TTGTTGCAGCCCATTGGTCTGCAGAGCGATCAAACCACACTACCTCAGCGTGTCGCTGGACCGTCTGGCTaGTCTCCAGAGGCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LLQPIGLQSDQTTLPQRVAGPSG*SPEASG
Trigger: CCCTGAGGCCTCTGGAGACCAGCCAGACGGTCCAGC...GACACGCTGAGGTAGTGTGGTTTGATCGCTCTGCAGACCAATGGGCTGCAACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGCATGCCTGGGCACTTTaGGGTGCTGTGGTCAGTTGG +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLHAWAL*GAVVSW
Trigger: CCAACTGACCACAGCACCCCAAAGTGCCCAGGCATG...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp CAGGAATCCAGTGAACATCTCCACGGACTGATGGTTTCACTGCAGGCAGGCCCCTGGAGGAGAAAGGAGTaGGGGCCCTGCAGTCCACTG +
Preference number: 4 (lower is better)
Translates to: QESSEHLHGLMVSLQAGPWRRKE*GPCSPL
Trigger: CAGTGGACTGCAGGGCCCCCACTCCTTTCTCCTCCA...GGGGCCTGCCTGCAGTGAAACCATCAGTCCGTGGAGATGTTCACTGGATTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp CTGGAGCATCTGATGGGTGGCAAGGAGCCACCATGTGCCCTTCCAAATGCTGGGTGCAGATCAGAGAGATaGGCTCACCTGCCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LEHLMGGKEPPCALPNAGCRSER*AHLPSA
Trigger: GGCACTGGGCAGGTGAGCCCATCTCTCTGATCTGCA...CCCAGCATTTGGAAGGGCACATGGTGGCTCCTTGCCACCCATCAGATGCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGAGCAGAGCCTGCCCCATaGCACGGTTGGAGAATACTG +
Preference number: 4 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGAEPAP*HGWRIL
Trigger: CAGTATTCTCCAACCGTGCCATGGGGCAGGCTCTGC...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGCCCTCTTACCCTGCCTaGACTCCCAGCCCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: VPGARINIDLSLLLHATLPSYPA*TPSPEP
Trigger: GGGCTCTGGGCTGGGAGTCCAGGCAGGGTAAGAGGG...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp ACTTCTTCCCCAGCAGCATCCAGCCAGACACTCGCACAGCAGTCACTAAATGCACCTGGAGGGGGTAAGTaGCAGGGCTGCAGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: TSSPAASSQTLAQQSLNAPGGGK*QGCSPS
Trigger: AGAGGGGCTGCAGCCCTGCCACTTACCCCCTCCAGG...TGCATTTAGTGACTGCTGTGCGAGTGTCTGGCTGGATGCTGCTGGGGAAGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGCTGGCTTCATCCCAATaGGGCAGTGTCCCTGGGTTA +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLLASSQ*GSVPGL
Trigger: TAACCCAGGGACACTGCCTCATTGGGATGAAGCCAG...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGGACCACTCCCGTGTCTTCAATCCAGAAATaGGCTGATGAAACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LKSFRRGGVGSCRWTTPVSSIQK*ADETCS
Trigger: GGAGCAGGTTTCATCAGCTCATTTCTGGATTGAAGA...CACGGGAGTGGTCCAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR TCA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCTGTCTTTGGATTTCCTaGCACTCTCAGACGTGGCTT +
Preference number: 4 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSCLWIS*HSQTWL
Trigger: AAGCCACGTCTGAGAGTGTCAGGAAATCCAAAGACA...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTCTTTATAACTaGCGCCAAGCTCCGAGATCA +
Preference number: 4 (lower is better)
Translates to: PGDQMWWHHAASRWLSKGSALYN*RQAPRS
Trigger: TGATCTCGGAGCTTGGCGTCAGTTATAAAGAGCTGA...GCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp GACAAGCAGGTAGCAGAGCTGGAAGTAGAATCAAGGCTTTGCAATGCCCAGTTGCAGCGCCCTGGTCCCTaGGCTGGCACTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: DKQVAELEVESRLCNAQLQRPGP*AGTAGS
Trigger: TGACCCTGCAGTGCCAGCTCAGGGACCAGGGCGCTG...CAACTGGGCATTGCAAAGCCTTGATTCTACTTCCAGCTCTGCTACCTGCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp TACCAAAGTGAACCTACTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGCATCTGCCGTCATCTCAGACTTaGCGTCCAGGTGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: YQSEPTGLPEQVLPLEHLPSSQT*RPGGGL
Trigger: CAAGCCACCACCTGGACGTCAAGTCTGAGATGACGG...CAGATGCTCCAGGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCACTTTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324058.9
CDS-3UTR TCA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAATGGCTCCGGAGAATaGGTGGCCCTATTACATTTC +
Preference number: 4 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSNGSGE*VALLHF
Trigger: GAAATGTAATAGGGCCACTCATTCTCCGGAGCCATT...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCCGCCAGGATCAACATTaGCTTGTCTCTTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSRQDQH*LVSSPS
Trigger: TGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCG...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp ATGGCTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCATCTCCCATTGTCCTGTaGGGTCCCCGGCGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: MADLVGSYEIRPGLSTSASPIVL*GPRRQD
Trigger: ATCCTGGCGCCGGGGACCTCACAGGACAATGGGAGA...TGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGCGGCAGAGGGGAGCATaGAGTCACAAGACGACGGAC +
Preference number: 4 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGRQRGA*SHKTTD
Trigger: GTCCGTCGTCTTGTGACTTCATGCTCCCCTCTGCCG...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGGACCACTCCCGTGGATCATTACAAATCCTaGAAACCCAGAGGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: LKSFRRGGVGSCRWTTPVDHYKS*KPRGRV
Trigger: AACCCTCCCTCTGGGTTTTCAGGATTTGTAATGATC...CACGGGAGTGGTCCAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR TCA 90 bp CCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTTGCTGACCAGGACTTaGACTGGGGTTCACATTACA +
Preference number: 4 (lower is better)
Translates to: PGDQMWWHHAASRWLSKGLLTRT*TGVHIT
Trigger: TGTAATGTGAACCCCAGTTCAAGTCCTGGTCAGCAA...GCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGGTTGCCCTCACCCCATaGGTTCCCTCAACTGCCTAC +
Preference number: 4 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQVALTP*VPSTAY
Trigger: GTAGGCAGTTGAGGGAACTCATGGGGTGAGGGCAAC...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTGACTTCCAGTAGGGACAAATGGGTCTaGCCTCAAAGCCAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: PTSPTGHCPAIPLWLTSSRDKWV*PQSQGH
Trigger: ATGGCCTTGGCTTTGAGGTCAGACCCATTTGTCCCT...ACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp GGGGAGCATGAAGTCACAAGACGACGGACGTCTGAGCTCCTGGGACTCCTGGAGCTGCAGGCCAATCTCTaGCAGCTTCAGCCCATAGAT +
Preference number: 4 (lower is better)
Translates to: GEHEVTRRRTSELLGLLELQANL*QLQPID
Trigger: ATCTATGGGCTGAAGCTGTCAGAGATTGGCCTGCAG...CTCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTTGTGACTTCATGCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp CGTGCTGATTTACTCACAGGAGTATCTCTCCCATTGTCCTGTGAGGTCCCCGGCCGGCCTCTTGTCTGGTaGCAATCCCAGCCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: RADLLTGVSLPLSCEVPGRPLVW*QSQPGC
Trigger: ACACCCAGGCTGGGATTGTCACCAGACAAGAGGCCG...GCCGGGGACCTCACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGTCCTCCCAGTGGCTCTaGCTTTCCCTGCGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMSSQWL*LSLRGA
Trigger: AGCTCCTCGCAGGGAAAGTCAGAGCCACTGGGAGGA...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp GGGAGGGTTGAGCCCGACCCACAACTGGTCAGGAATCCAGTGAACATCTCCACGCAAAAGGAGCTGAAATaGGGCTGCATGCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: GRVEPDPQLVRNPVNISTQKELK*GCMPGH
Trigger: GTGCCCAGGCATGCAGCCTCATTTCAGCTCCTTTTG...CGTGGAGATGTTCACTGGATTCCTGACCAGTTGTGGGTCGGGCTCAACCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp GAGGCAGGTCCTGCTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGAAAGGAAGGAAACTCTaGCACATGCTGCCACATGAA +
Preference number: 4 (lower is better)
Translates to: EAGPAEELPEGRCRVLSLKGRKL*HMLPHE
Trigger: TTCATGTGGCAGCATGTGTCAGAGTTTCCTTCCTTT...CAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAGCAGGACCTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp TCCTGTGTGCAGTGGGATGGACTGTTCACCCCAGGAGTGCTCCATTGGCCTTGCAGGTCCTGTCTGCCCTaGAGCCAGACTCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: SCVQWDGLFTPGVLHWPCRSCLP*SQTHFL
Trigger: GAGGAAATGAGTCTGGCTGCAGGGCAGACAGGACCT...GCAAGGCCAATGGAGCACTCCTGGGGTGAACAGTCCATCCCACTGCACACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGAGTGGAAGGTCCTGTCTaGCCTGCAGCCAGACTCATT +
Preference number: 4 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGVEGPV*PAARLI
Trigger: AATGAGTCTGGCTGCAGGGCAGACAGGACCTTCCAC...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGCGGGCTGTAATTCTTTaGTGTAGGAGGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLRAVIL*CRRLAW
Trigger: CCAGGCCAGCCTCCTACAGCAAAGAATTACAGCCCG...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CAGGAATCCAGTGAACATCTCCACGGACTGATGGTTTCACTGCAGGCAGGCCCCTCACCCACCGGACACTaGCCAGCCATTCCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: QESSEHLHGLMVSLQAGPSPTGH*PAIPLW
Trigger: CCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGA...GGGGCCTGCCTGCAGTGAAACCATCAGTCCGTGGAGATGTTCACTGGATTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR GCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCCACAGTTCAGTTTTATaGCTCAGGGCCTTTGCACAT +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSHSSVL*LRAFAH
Trigger: ATGTGCAAAGGCCCTGAGGCATAAAACTGAACTGTG...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGGGATCACCAAACCAGTaGTGCAGGTCACTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHEGSPNQ*CRSLPA
Trigger: AGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCC...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GGGGAGCATGAAGTCACAAGACGACGGACGTCTGAGCTCCTGGGACTCCTGGAGATGTGCCCTTCCAAATaGTGGGGTCTACAGACCAGG +
Preference number: 4 (lower is better)
Translates to: GEHEVTRRRTSELLGLLEMCPSK*WGLQTR
Trigger: CCTGGTCTGTAGACCCCAGCATTTGGAAGGGCACAT...CTCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTTGTGACTTCATGCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR GCA 90 bp CAGAGGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTCAAGGAGCCACCATGTaGCCTTCCAAATGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: QREAEGGSPNQCCRSLPAQGATM*PSKCWG
Trigger: ACCCCAGCATTTGGAAGGGCACATGGTGGCTCCTTG...AGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR GCA 90 bp ACTTCTTCCCCAGCAGCATCCAGCCAGACACTCGCACAGCAGTCACTAAATGCAGCCAGGACCCAGCCGTaGGTCCAAAGGCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: TSSPAASSQTLAQQSLNAARTQP*VQRLPL
Trigger: AAGGGGAAGCCTTTGGACGCACGGCTGGGTCCTGGC...TGCATTTAGTGACTGCTGTGCGAGTGTCTGGCTGGATGCTGCTGGGGAAGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp ATGGCTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCACCTGTCCCCAGACAGTaGGGTGGCTGCCGATCCCTT +
Preference number: 4 (lower is better)
Translates to: MADLVGSYEIRPGLSTSAPVPRQ*GGCRSL
Trigger: AAGGGATCGGCAGCCACCGCACTGTCTGGGGACAGG...TGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp CCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCAAATTACGATCAAGGTaGAACGCAGGCCCAAGTGTG +
Preference number: 4 (lower is better)
Translates to: PGDQMWWHHAASRWLSKGKLRSR*NAGPSV
Trigger: CACACTTGGGCCTGCGTTGCACCTTGATCGTAATTT...GCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp TTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTGGAAGCCTAGTTCCTGCAGGTaGTTCAGCATCTCTTCCTCG +
Preference number: 4 (lower is better)
Translates to: FSWVAHLIRGTSLCSRWKPSSCR*FSISSS
Trigger: CGAGGAAGAGATGCTGAAGCACCTGCAGGAACTAGG...CTTCCACCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGCAGCGACGCCTCCTGTaGTTCCCGGCCGGAAAGAGT +
Preference number: 4 (lower is better)
Translates to: VPGARINIDLSLLLHATLQRRLL*FPAGKS
Trigger: ACTCTTTCCGGCCGGGAAGCACAGGAGGCGTCGCTG...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp CGTGCTGATTTACTCACAGGAGTATCTCTCCCATTGTCCTGTGAGGTCCCCGGCTCGGAGGACTCCAGCTaGCTCCTGAGCGCACCCATA +
Preference number: 4 (lower is better)
Translates to: RADLLTGVSLPLSCEVPGSEDSS*LLSAPI
Trigger: TATGGGTGCGCTCAGGAGGCAGCTGGAGTCCTCCGA...GCCGGGGACCTCACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp GGGGAGCATGAAGTCACAAGACGACGGACGTCTGAGCTCCTGGGACTCCTGGAGATCCAAGCTGGGCTCTaGCAGAGTAAGCTGTTCACG +
Preference number: 4 (lower is better)
Translates to: GEHEVTRRRTSELLGLLEIQAGL*QSKLFT
Trigger: CGTGAACAGCTTACTCTGGCAGAGCCCAGCTTGGAT...CTCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTTGTGACTTCATGCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp CAGAGGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTGCCCAAAGTCCCCCTTaGCTTCCCCTCTTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: QREAEGGSPNQCCRSLPAAQSPP*LPLFSS
Trigger: AGAACTGAAGAGGGGAAGGCAAGGGGGACTTTGGGC...AGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGGGCATCAAAAACTCCTaGCAGGACCCAGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGGIKNS*QDPGRQ
Trigger: CTGCCGCCCTGGGTCCTGGCAGGAGTTTTTGATGCC...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp GGGAGGGTTGAGCCCGACCCACAACTGGTCAGGAATCCAGTGAACATCTCCACGGGCTCTGACTTTCCCTaGGAGGAGCTGACTGTCTGT +
Preference number: 4 (lower is better)
Translates to: GRVEPDPQLVRNPVNISTGSDFP*EELTVC
Trigger: ACAGACAGTCAGCTCCTCGCAGGGAAAGTCAGAGCC...CGTGGAGATGTTCACTGGATTCCTGACCAGTTGTGGGTCGGGCTCAACCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGTGTCTGGCCAGAGCCTaGCCCTCAGTAGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQCLARA*PSVGTQ
Trigger: CTGAGTTCCTACTGAGGGGCAGGCTCTGGCCAGACA...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp CAGGAATCCAGTGAACATCTCCACGGACTGATGGTTTCACTGCAGGCAGGCCCCACTGACCTGCTGGCTTaGCTGGGAAGGGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: QESSEHLHGLMVSLQAGPTDLLA*LGRAMA
Trigger: TGCCATTGCCCTTCCCAGGCAAGCCAGCAGGTCAGT...GGGGCCTGCCTGCAGTGAAACCATCAGTCCGTGGAGATGTTCACTGGATTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp CTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGGACCACTCCCGTGACGTTCAGTCCCATTTaGAGTCAAGTGGCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: LKSFRRGGVGSCRWTTPVTFSPI*SQVALS
Trigger: TGACAAAGCCACTTGACTGCAAATGGGACTGAACGT...CACGGGAGTGGTCCAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp GAGTCCGCCATCCTGTACTGTGCCCCAGGGAGCCACGGCACAAAGCTTGAGCCGTGCAAAAGCTGGTTGTaGAAACCCGAACTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: ESAILYCAPGSHGTKLEPCKSWL*KPELWK
Trigger: CTTCCACAGTTCGGGTTTGCACAACCAGCTTTTGCA...CGGCTCAAGCTTTGTGCCGTGGCTCCCTGGGGCACAGTACAGGATGGCGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp CAGGAATCCAGTGAACATCTCCACGGACTGATGGTTTCACTGCAGGCAGGCCCCAGGGTGGACAGCTGCTaGAAACAAGCCTCCACGTCC +
Preference number: 4 (lower is better)
Translates to: QESSEHLHGLMVSLQAGPRVDSC*KQASTS
Trigger: GGACGTGGAGGCTTGTTTCCAGCAGCTGTCCACCCT...GGGGCCTGCCTGCAGTGAAACCATCAGTCCGTGGAGATGTTCACTGGATTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGTGGTGCCCAGGGCCGTaGTCTTTCCCGGCTTATCAC +
Preference number: 4 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMWCPGP*SFPAYH
Trigger: GTGATAAGCCGGGAAAGACCACGGCCCTGGGCACCA...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GGCCTCTACCCACCAGATGCCAGTAGCAGTGTCCCAGCTGTGACAACCAAAAATCTCAGCAGGCCCCTGTaGAGGGTTTGGGCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GLYPPDASSSVPAVTTKNLSRPL*RVWAGF
Trigger: GAAGCCAGCCCAAACCCTCCACAGGGGCCTGCTGAG...ATTTTTGGTTGTCACAGCTGGGACACTGCTACTGGCATCTGGTGGGTAGAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGTCCCCTACCAGCCTGTaGTTATCCCGCTCGAGCCTG +
Preference number: 4 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGSPTSL*LSRSSL
Trigger: CAGGCTCGAGCGGGATAACCACAGGCTGGTAGGGGA...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGAATTCCCGGTGCCTGTaGAAGGTCCTGTCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQNSRCL*KVLSAL
Trigger: CAGGGCAGACAGGACCTTCCACAGGCACCGGGAATT...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGGAGCCACAGAACACCTaGGCCTCTTCTCCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHEEPQNT*ASSPLS
Trigger: AGAAAGAGGAGAAGAGGCCCAGGTGTTCTGTGGCTC...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp ACTTCTTCCCCAGCAGCATCCAGCCAGACACTCGCACAGCAGTCACTAAATGCACCGGAGCCAGGAAGGTaGCCGTGTACTCAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: TSSPAASSQTLAQQSLNAPEPGR*PCTQPV
Trigger: CACTGGCTGAGTACACGGCCACCTTCCTGGCTCCGG...TGCATTTAGTGACTGCTGTGCGAGTGTCTGGCTGGATGCTGCTGGGGAAGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGGTGGTGGCTTGTCTCTaGGACTCCCGGAGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGVVACL*DSRSQE
Trigger: TTCCTGGCTCCGGGAGTCCCAGAGACAAGCCACCAC...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGTTGTGCGGGGAGACCTaGTTCCACAGTGACCGCTGC +
Preference number: 4 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMLCGET*FHSDRC
Trigger: GCAGCGGTCACTGTGGAACCAGGTCTCCCCGCACAA...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGAGGGACGTTATCGACTTaGAGGGCAGGACAGGGCATT +
Preference number: 4 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGGTLST*RAGQGI
Trigger: AATGCCCTGTCCTGCCCTCCAAGTCGATAACGTCCC...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CGTGCTGATTTACTCACAGGAGTATCTCTCCCATTGTCCTGTGAGGTCCCCGGCAGCCAGGATCCTTGCTaGGCTCAGGAGCTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: RADLLTGVSLPLSCEVPGSQDPC*AQELRG
Trigger: CCCTCTGAGCTCCTGAGCCCAGCAAGGATCCTGGCT...GCCGGGGACCTCACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGGGAAGGGGTGCTGGATaGGAACGATGCAGTGACTGC +
Preference number: 4 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQGRGAG*ERCSDC
Trigger: GCAGTCACTGCATCGTTCCCATCCAGCACCCCTTCC...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGGGAGACCAGATGTGGTaGCACCACGCTGCATCTCGC +
Preference number: 4 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMGDQMW*HHAASR
Trigger: GCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCC...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GAGGCAGGTCCTGCTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGTTATTAGGGAATCGTTaGGTTACGCTGCAAAGGTCG +
Preference number: 4 (lower is better)
Translates to: EAGPAEELPEGRCRVLSLLLGNR*VTLQRS
Trigger: CGACCTTTGCAGCGTAACCCAACGATTCCCTAATAA...CAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAGCAGGACCTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp GGTTTAGGGCTCCGCCTCCAGGGAAGTCCGCCATTGTTGTTTGCTGACAGTCCGCCAGACGGCAATTCATaGCCCGGGAGAATAAGTGGC +
Preference number: 4 (lower is better)
Translates to: GLGLRLQGSPPLLFADSPPDGNS*PGRISG
Trigger: GCCACTTATTCTCCCGGGCCATGAATTGCCGTCTGG...CGGACTGTCAGCAAACAACAATGGCGGACTTCCCTGGAGGCGGAGCCCTAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp CTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCACTGGCGGCTGCAAGGGTGCTaGACCGACATTCCAGAGACC +
Preference number: 4 (lower is better)
Translates to: LILLGAMRSVLDSRPQHWRLQGC*TDIPET
Trigger: GGTCTCTGGAATGTCGGTCCAGCACCCTTGCAGCCG...CCAGTGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp CTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCACTGGGAGTTCCGCCAGTCTTaGCTTCTGCAGGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LILLGAMRSVLDSRPQHWEFRQS*LLQGSR
Trigger: CCTGGACCCCTGCAGAAGCCAAGACTGGCGGAACTC...CCAGTGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp CTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCACTGGGTCTGGGTGCATCATTaGACCGCAGGGAGTTCCGCC +
Preference number: 4 (lower is better)
Translates to: LILLGAMRSVLDSRPQHWVWVHH*TAGSSA
Trigger: GGCGGAACTCCCTGCGGTCCAATGATGCACCCAGAC...CCAGTGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGGTCCAAGCACTCCTCTaGTGGGCAGCCACAGACCAG +
Preference number: 4 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMVQALL*WAATDQ
Trigger: CTGGTCTGTGGCTGCCCACCAGAGGAGTGCTTGGAC...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp CGTGCTGATTTACTCACAGGAGTATCTCTCCCATTGTCCTGTGAGGTCCCCGGCTGGTCTCATGAGCCCTaGAGAAGGTGGCTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: RADLLTGVSLPLSCEVPGWSHEP*RRWLGV
Trigger: CACCCCCAGCCACCTTCTCCAGGGCTCATGAGACCA...GCCGGGGACCTCACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGGAGCTGACTGTCTGTTaGCCATGGCTCTTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHEELTVC*PWLFGL
Trigger: GAGACCAAAGAGCCATGGCCAACAGACAGTCAGCTC...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGGATGACCATGATCAGTaGGTTCGGCCCCTTCAACTG +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHEDDHDQ*VRPLQL
Trigger: CAGTTGAAGGGGCCGAACCCACTGATCATGGTCATC...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CTAGACCCAGACGGCAATTCATGGCCCGGGAGAATAAGTGGCTCTGCCTTGGAATGGAAGCTTCCTGTCTaGCCAGAGCCTGCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LDPDGNSWPGRISGSALEWKLPV*PEPAPQ
Trigger: CTGAGGGGCAGGCTCTGGCCAGACAGGAAGCTTCCA...TTCCAAGGCAGAGCCACTTATTCTCCCGGGCCATGAATTGCCGTCTGGGTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGGAGCATGAAGTCACAAGACGACGGACGTCTGAGCTCCTGGGACTCCTGGAGGATCTGAGACACCCATaGCCAACTCCAACCACCAGA +
Preference number: 4 (lower is better)
Translates to: GEHEVTRRRTSELLGLLEDLRHP*PTPTTR
Trigger: TCTGGTGGTTGGAGTTGGCCATGGGTGTCTCAGATC...CTCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTTGTGACTTCATGCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGACTGTGGCCAGGAAGATaGAAGCCCGATGCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGLWPGR*KPDAVR
Trigger: TCTGACAGCATCGGGCTTCCATCTTCCTGGCCACAG...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGCTGCAGTCCACTGAGTaGGGTGCCTCTCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VPGARINIDLSLLLHATLLQSTE*GASQWG
Trigger: CCCCCACTGAGAGGCACCCCACTCAGTGGACTGCAG...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTGACTTCCAGTCTTGTAATAGCCCAGTaGGGAAAGGTGTGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: PTSPTGHCPAIPLWLTSSLVIAQ*GKVWPL
Trigger: AAGGGGCCACACCTTTCCCCACTGGGCTATTACAAG...ACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCTGTTACATCTCTTCCTaGGTTGTGTACTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSCYISS*VVYCRK
Trigger: CTTCCTGCAGTACACAACCCAGGAAGAGATGTAACA...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCATCAGCCCATGCTTaGACACAGCCTGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHESSAHA*TQPAGV
Trigger: AACACCAGCAGGCTGTGTCCAAGCATGGGCTGATGA...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 72 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTaGTGGCTGACTTCCAGTTGTCCCAAGCCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: PTSPTGHCPAIP*WLTSSCPKPSR
Trigger: TCTACTTGGCTTGGGACAACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
3UTR CAA 72 bp AATGCCCAGTTGCAGGCCCTTCCTGCATTTCAGCAGTaGTATCACTTCCTGGCCTGTGAGACCTCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: NAQLQALPAFQQ*YHFLACETSGP
Trigger: GGGGCCCGAGGTCTCACAGGCCAGGAAGTGATACAACTGCTGAAATGCAGGAAGGGCCTGCAACTGGGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp CTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCACTGGCCGTCATCTCAGACTTaGCGTCCAGGTGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: LILLGAMRSVLDSRPQHWPSSQT*RPGGGL
Trigger: CAAGCCACCACCTGGACGTCAAGTCTGAGATGACGG...CCAGTGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp ACGCTAGGTTGCCTGACATGGCCTGTGCTTTTAGTAACACCCCTTCCCATCCCATCCTCCCAGTGGCTCTaGCTTTCCCTGCGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: TLGCLTWPVLLVTPLPIPSSQWL*LSLRGA
Trigger: AGCTCCTCGCAGGGAAAGTCAGAGCCACTGGGAGGA...TGGGATGGGAAGGGGTGTTACTAAAAGCACAGGCCATGTCAGGCAACCTAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp CAGGAATCCAGTGAACATCTCCACGGACTGATGGTTTCACTGCAGGCAGGCCCCGGCTTCATTCACCTCTaGCTGTGGCCAGGAAGATGG +
Preference number: 4 (lower is better)
Translates to: QESSEHLHGLMVSLQAGPGFIHL*LWPGRW
Trigger: CCATCTTCCTGGCCACAGTCAGAGGTGAATGAAGCC...GGGGCCTGCCTGCAGTGAAACCATCAGTCCGTGGAGATGTTCACTGGATTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGATGGCAGGGCCACTCTaGGCACACAGCCCATGTGTG +
Preference number: 4 (lower is better)
Translates to: VPGARINIDLSLLLHATLMAGPL*AHSPCV
Trigger: CACACATGGGCTGTGTGCTCAGAGTGGCCCTGCCAT...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGGCCCTTCCGACCACATaGCACTGTCTCAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLALPTT*HCLNRE
Trigger: TTCTCTGTTGAGACAGTGTCATGTGGTCGGAAGGGC...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGAGGTCCTGTCTGCCCTaGAGCCAGACTCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQRSCLP*SQTHFL
Trigger: GAGGAAATGAGTCTGGCTGCAGGGCAGACAGGACCT...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGGTGGAAGGTCCTGTCTaGCCTGCAGCCAGACTCATT +
Preference number: 4 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQVEGPV*PAARLI
Trigger: AATGAGTCTGGCTGCAGGGCAGACAGGACCTTCCAC...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGGGAGCATGGGGCCATTaGTCAGGGAGCTCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMGAWGH*SGSSEL
Trigger: AAGCTCTGAGCTCCCTGAGCAATGGCCCCATGCTCC...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGGGAGCATGGGGCCATTaGTCAGGGAGCTCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGGAWGH*SGSSEL
Trigger: AAGCTCTGAGCTCCCTGAGCAATGGCCCCATGCTCC...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp TGTGACAAATTGTTTTCTGCTGCAGAGCCAGGCTGGACCGTCTGGCTGGTCTCCGGAGCATGGGGCCATTaGTCAGGGAGCTCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: CDKLFSAAEPGWTVWLVSGAWGH*SGSSEL
Trigger: AAGCTCTGAGCTCCCTGAGCAATGGCCCCATGCTCC...GGAGACCAGCCAGACGGTCCAGCCTGGCTCTGCAGCAGAAAACAATTTGTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp CAGAGGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTCGTGTACTCAGCCAGTaGCACGTCGTTGAGCATGTT +
Preference number: 4 (lower is better)
Translates to: QREAEGGSPNQCCRSLPARVLSQ*HVVEHV
Trigger: AACATGCTCAACGACGTGGCACTGGCTGAGTACACG...AGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGCGTGTACTCAGCCAGTaGCACGTCGTTGAGCATGTT +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLRVLSQ*HVVEHV
Trigger: AACATGCTCAACGACGTGGCACTGGCTGAGTACACG...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CTAGACCCAGACGGCAATTCATGGCCCGGGAGAATAAGTGGCTCTGCCTTGGAATTCCACAGTGACCGCTaGCAGGCACGTTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: LDPDGNSWPGRISGSALEFHSDR*QARSRI
Trigger: GATCCTGGAACGTGCCTGGCAGCGGTCACTGTGGAA...TTCCAAGGCAGAGCCACTTATTCTCCCGGGCCATGAATTGCCGTCTGGGTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR GCA 90 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTGACTTCCAGTATTCCGCCTTTTTCTTaGAGACGTTGTGCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: PTSPTGHCPAIPLWLTSSIPPFS*RRCAGR
Trigger: TCTCCCCGCACAACGTCTGCAAGAAAAAGGCGGAAT...ACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCCTGCAGGTCACTTCCTaGTTGGAAATTATAGGGAAG +
Preference number: 4 (lower is better)
Translates to: PGDQMWWHHAASRWLSKGLQVTS*LEIIGK
Trigger: CTTCCCTATAATTTCCAAGCAGGAAGTGACCTGCAG...GCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGATCACCAAACCAGTGCTaGAGGTCACTTCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGSPNQC*RSLPAW
Trigger: CCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGA...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GGGAGGGTTGAGCCCGACCCACAACTGGTCAGGAATCCAGTGAACATCTCCACGTCACCAAACCAGTGCTaGAGGTCACTTCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: GRVEPDPQLVRNPVNISTSPNQC*RSLPAW
Trigger: CCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGA...CGTGGAGATGTTCACTGGATTCCTGACCAGTTGTGGGTCGGGCTCAACCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR GCA 90 bp TTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTGGAAGATCGTTGGGTTACGCTaGAAAGGTCGTCTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: FSWVAHLIRGTSLCSRWKIVGLR*KGRLGL
Trigger: CAAGCCAAGACGACCTTTGCAGCGTAACCCAACGAT...CTTCCACCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GCGAGGGGAGTCCGCCATCCTGTACTGTGCCCCAGGGAGCCACGGCACAAAGCTCTTTCATGTGATTTCTaGCCAGGATTCAACCTGGAA +
Preference number: 4 (lower is better)
Translates to: ARGVRHPVLCPREPRHKALSCDF*PGFNLE
Trigger: TTCCAGGTTGAATCCTGGGCAGAAATCACATGAAAG...AGCTTTGTGCCGTGGCTCCCTGGGGCACAGTACAGGATGGCGGACTCCCCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR GCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGGAGTGGGGTTGGGGTTaGCGTAGGGACTCAGTTTAT +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLEWGWG*RRDSVY
Trigger: ATAAACTGAGTCCCTACGGCAACCCCAACCCCACTC...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGAATCCCGGTGCATGTCTaGTTAGAGATGGATCCTGGG +
Preference number: 4 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGIPVHV*LEMDPG
Trigger: CCCAGGATCCATCTCTAAGCAGACATGCACCGGGAT...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp ACAAAACAATTCTCCATGGCTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGAGGTGCTCCTGCAGGCTaGGCGCCGCCTCTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: TKQFSMADLVGSYEIRPGGAPAG*APPLPA
Trigger: AGCGGGAAGAGGCGGCGCGCAGCCTGCAGGAGCACC...TCCAGGACGGATCTCATAGCTCCCAACAAGATCAGCCATGGAGAATTGTTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGGGGAGTGCGGATGTCTaGACCAGGAGAAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQGSADV*TRRKAS
Trigger: AGAAGCCTTTCTCCTGGTGCAGACATCCGCACTCCC...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp GGGGAGCATGAAGTCACAAGACGACGGACGTCTGAGCTCCTGGGACTCCTGGAGTCCTCCCTGGGCCTCTaGATTTTCACCCATAACATG +
Preference number: 4 (lower is better)
Translates to: GEHEVTRRRTSELLGLLESSLGL*IFTHNM
Trigger: CATGTTATGGGTGAAAATGCAGAGGCCCAGGGAGGA...CTCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTTGTGACTTCATGCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp ATGGCTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCAGGCTCACCTGCCCAGTaGCCTCAGTGGCTAATGCGT +
Preference number: 4 (lower is better)
Translates to: MADLVGSYEIRPGLSTSAGSPAQ*PQWLMR
Trigger: ACGCATTAGCCACTGAGGGCACTGGGCAGGTGAGCC...TGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp GCGAGGGGAGTCCGCCATCCTGTACTGTGCCCCAGGGAGCCACGGCACAAAGCTAACAATGGAAGAGTTTaGAGATCAGAGAGATGGGCT +
Preference number: 4 (lower is better)
Translates to: ARGVRHPVLCPREPRHKANNGRV*RSERWA
Trigger: AGCCCATCTCTCTGATCTGCAAACTCTTCCATTGTT...AGCTTTGTGCCGTGGCTCCCTGGGGCACAGTACAGGATGGCGGACTCCCCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGTGCAGCCCATTGGTCTaGAGAGCGATCAAACCACAC +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLCSPLV*RAIKPH
Trigger: GTGTGGTTTGATCGCTCTGCAGACCAATGGGCTGCA...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp ATCATTACAAATCCTGAAAACCCAGAGGGAGGGTTGAGCCCGACCCACAACTGGCAGCCCCTCTTACCCTaGCTGGACTCCCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: IITNPENPEGGLSPTHNWQPLLP*LDSQPR
Trigger: TCTGGGCTGGGAGTCCAGGCAGGGTAAGAGGGGCTG...CCAGTTGTGGGTCGGGCTCAACCCTCCCTCTGGGTTTTCAGGATTTGTAATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGTGGTGCCCAGGGCCGTaGTCTTTCCCGGCTTATCAC +
Preference number: 4 (lower is better)
Translates to: VPGARINIDLSLLLHATLWCPGP*SFPAYH
Trigger: GTGATAAGCCGGGAAAGACCACGGCCCTGGGCACCA...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp TCCTGTGTGCAGTGGGATGGACTGTTCACCCCAGGAGTGCTCCATTGGCCTTGCGCGCACACTCTTTCATaGAACCTCTCTTGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: SCVQWDGLFTPGVLHWPCAHTLS*NLSWSP
Trigger: CGGAGACCAAGAGAGGTTCCATGAAAGAGTGTGCGC...GCAAGGCCAATGGAGCACTCCTGGGGTGAACAGTCCATCCCACTGCACACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp GGCCTCTACCCACCAGATGCCAGTAGCAGTGTCCCAGCTGTGACAACCAAAAATTCCCCTACCAGCCTGTaGTTATCCCGCTCGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GLYPPDASSSVPAVTTKNSPTSL*LSRSSL
Trigger: CAGGCTCGAGCGGGATAACCACAGGCTGGTAGGGGA...ATTTTTGGTTGTCACAGCTGGGACACTGCTACTGGCATCTGGTGGGTAGAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGGAGCATGAAGTCACAAGACGACGGACGTCTGAGCTCCTGGGACTCCTGGAGGTGGCTTTCTGGAGTTaGCCCAGATTCCCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: GEHEVTRRRTSELLGLLEVAFWS*PRFPFS
Trigger: ACTGAAAGGGAATCTGGGCCAACTCCAGAAAGCCAC...CTCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTTGTGACTTCATGCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGATCAGACGTGGCTTTCTaGAGTTGGCCCAGATTCCCT +
Preference number: 4 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGSDVAF*SWPRFP
Trigger: AGGGAATCTGGGCCAACTCCAGAAAGCCACGTCTGA...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGCTAGAGCGTGCATCTTaGCTTTTCCCTGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLLERAS*LFPGGA
Trigger: AGCACCTCCAGGGAAAAGCCAAGATGCACGCTCTAG...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGAATCAGCACCGCGTCTaGAATTCCCGGTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMNQHRV*NSRCLW
Trigger: CCACAGGCACCGGGAATTCCAGACGCGGTGCTGATT...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp TTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTGGAAGTTCCTTGCAGGGCATTaGCTACACCAGTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: FSWVAHLIRGTSLCSRWKFLAGH*LHQCFS
Trigger: GGAGAAACACTGGTGTAGCCAATGCCCTGCAAGGAA...CTTCCACCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp ATCATTACAAATCCTGAAAACCCAGAGGGAGGGTTGAGCCCGACCCACAACTGGCCGGAGCCAGGAAGGTaGCCGTGTACTCAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: IITNPENPEGGLSPTHNWPEPGR*PCTQPV
Trigger: CACTGGCTGAGTACACGGCCACCTTCCTGGCTCCGG...CCAGTTGTGGGTCGGGCTCAACCCTCCCTCTGGGTTTTCAGGATTTGTAATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGTTGACGTCCAGGTGGTaGCTTGTCTCTGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGLTSRW*LVSGTP
Trigger: GGGAGTCCCAGAGACAAGCCACCACCTGGACGTCAA...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CTGGAGCATCTGATGGGTGGCAAGGAGCCACCATGTGCCCTTCCAAATGCTGGGTTCAGAGAATCCAGTTaGGCTGTCTGTGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LEHLMGGKEPPCALPNAGFRESS*AVCAGH
Trigger: GTGGCCAGCACAGACAGCCCAACTGGATTCTCTGAA...CCCAGCATTTGGAAGGGCACATGGTGGCTCCTTGCCACCCATCAGATGCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp GGTTTAGGGCTCCGCCTCCAGGGAAGTCCGCCATTGTTGTTTGCTGACAGTCCGTTCCAGGATCAAGCGTaGACACCAAGGACAGAGGGA +
Preference number: 4 (lower is better)
Translates to: GLGLRLQGSPPLLFADSPFQDQA*TPRTEG
Trigger: TCCCTCTGTCCTTGGTGTCCACGCTTGATCCTGGAA...CGGACTGTCAGCAAACAACAATGGCGGACTTCCCTGGAGGCGGAGCCCTAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCCTGGAGACCAGATGTaGTGGCACCACGCTGCATCT +
Preference number: 4 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMPGDQM*WHHAAS
Trigger: AGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGG...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp TACCAAAGTGAACCTACTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGCATCTGTGCCCTTCCAAATGCTaGGGTCTACAGACCAGGCGA +
Preference number: 4 (lower is better)
Translates to: YQSEPTGLPEQVLPLEHLCPSKC*GLQTRR
Trigger: TCGCCTGGTCTGTAGACCCCAGCATTTGGAAGGGCA...CAGATGCTCCAGGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCACTTTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324058.9
CDS-3UTR CCA 90 bp GAGGCAGGTCCTGCTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGCAGTTATTGTGCATTTaGGATTCAGCGGGAAAGTAC +
Preference number: 4 (lower is better)
Translates to: EAGPAEELPEGRCRVLSLQLLCI*DSAGKY
Trigger: GTACTTTCCCGCTGAATCCCAAATGCACAATAACTG...CAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAGCAGGACCTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp CGTGCTGATTTACTCACAGGAGTATCTCTCCCATTGTCCTGTGAGGTCCCCGGCGGTGAGAGCAGGACCTaGTCTCGGGACCACTATGGA +
Preference number: 4 (lower is better)
Translates to: RADLLTGVSLPLSCEVPGGESRT*SRDHYG
Trigger: TCCATAGTGGTCCCGAGACCAGGTCCTGCTCTCACC...GCCGGGGACCTCACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCCTCAGTCCGTCCCTTaGCTGTTGGCTCCATCTCAG +
Preference number: 4 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMPQSVP*LLAPSQ
Trigger: CTGAGATGGAGCCAACAGCCAAGGGACGGACTGAGG...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GGCCTCTACCCACCAGATGCCAGTAGCAGTGTCCCAGCTGTGACAACCAAAAATACGTGGGTGCTCAGCTaGTCCACCTTCCGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: GLYPPDASSSVPAVTTKNTWVLS*STFRRS
Trigger: ACTCCTCCGGAAGGTGGACCAGCTGAGCACCCACGT...ATTTTTGGTTGTCACAGCTGGGACACTGCTACTGGCATCTGGTGGGTAGAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTGGGGCCCTTTGTCTaGGTGCATCATTGGACCGCA +
Preference number: 4 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMLGPFV*VHHWTA
Trigger: TGCGGTCCAATGATGCACCCAGACAAAGGGCCCCAG...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp AATGGAGCGATCATTACAAATCCTGAAAACCCAGAGGGAGGGTTGAGCCCGACCGAGCCCTGGAGAAGGTaGCTGGGGGTGCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: NGAIITNPENPEGGLSPTEPWRR*LGVPLP
Trigger: AGGAAGTGGCACCCCCAGCCACCTTCTCCAGGGCTC...GGTCGGGCTCAACCCTCCCTCTGGGTTTTCAGGATTTGTAATGATCGCTCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp CTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCACTGGATGAGGCTGCATGCCTaGGCACTTTGGGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: LILLGAMRSVLDSRPQHWMRLHA*ALWGAV
Trigger: CACAGCACCCCAAAGTGCCCAGGCATGCAGCCTCAT...CCAGTGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCCCCGCTCAACAGCTaGATTTTCACTGCATCTTCC +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHESPLNS*IFTASS
Trigger: GGAAGATGCAGTGAAAATCCAGCTGTTGAGCGGGGA...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp GAGGCAGGTCCTGCTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGAAAAGGTTCTGGAGATaGATGATGGTGATGGTTGCA +
Preference number: 4 (lower is better)
Translates to: EAGPAEELPEGRCRVLSLKRFWR*MMVMVA
Trigger: TGCAACCATCACCATCATCCATCTCCAGAACCTTTT...CAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAGCAGGACCTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 72 bp CCAAGCCAAGTAGAACGGACCCTTACCTTCATCCCGTaGCTCAGGGCACATGTGACACTTGCGTGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: PSQVERTLTFIP*LRAHVTLACVL
Trigger: CAGCACGCACGCAAGTGTCACATGTGCCCTGAGCAACGGGATGAAGGTAAGGGTCCGTTCTACTTGGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CGTGCTGATTTACTCACAGGAGTATCTCTCCCATTGTCCTGTGAGGTCCCCGGCCTGGCTTCATCCCAATaGGGCAGTGTCCCTGGGTTA +
Preference number: 4 (lower is better)
Translates to: RADLLTGVSLPLSCEVPGLASSQ*GSVPGL
Trigger: TAACCCAGGGACACTGCCTCATTGGGATGAAGCCAG...GCCGGGGACCTCACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTGACTTCCAGTTGTCTTTGGATTTCCTaGCACTCTCAGACGTGGCTT +
Preference number: 4 (lower is better)
Translates to: PTSPTGHCPAIPLWLTSSCLWIS*HSQTWL
Trigger: AAGCCACGTCTGAGAGTGTCAGGAAATCCAAAGACA...ACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp ACAAAACAATTCTCCATGGCTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACAGCGCCCTGGTCCCTaGGCTGGCACTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: TKQFSMADLVGSYEIRPGQRPGP*AGTAGS
Trigger: TGACCCTGCAGTGCCAGCTCAGGGACCAGGGCGCTG...TCCAGGACGGATCTCATAGCTCCCAACAAGATCAGCCATGGAGAATTGTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGAATGGCTCCGGAGAATaGGTGGCCCTATTACATTTC +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHENGSGE*VALLHF
Trigger: GAAATGTAATAGGGCCACTCATTCTCCGGAGCCATT...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGTCTTGTTGGGAGCTATaGGATCCGTCCTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQSCWEL*DPSWTL
Trigger: GAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGA...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGCCATTCCTTTGTGGCTaGCTTCCAGTTGTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQPFLCG*LPVVPS
Trigger: GCTTGGGACAACTGGAAGTCAGCCACAAAGGAATGG...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CTAGACCCAGACGGCAATTCATGGCCCGGGAGAATAAGTGGCTCTGCCTTGGAATGCTTGCAGCTGGCTTaGCAAGAGCATGCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: LDPDGNSWPGRISGSALECLQLA*QEHALP
Trigger: GGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCA...TTCCAAGGCAGAGCCACTTATTCTCCCGGGCCATGAATTGCCGTCTGGGTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR TCA 90 bp GACAAGCAGGTAGCAGAGCTGGAAGTAGAATCAAGGCTTTGCAATGCCCAGTTGGACATCTCTGGTGGGTaGGCCTGGGTCAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: DKQVAELEVESRLCNAQLDISGG*AWVRVW
Trigger: CCAGACCCTGACCCAGGCTCACCCACCAGAGATGTC...CAACTGGGCATTGCAAAGCCTTGATTCTACTTCCAGCTCTGCTACCTGCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCTCTGCCTTGGAAACATaGTTTATTAGGGAATCGTTG +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSSALET*FIRESL
Trigger: CAACGATTCCCTAATAAATCATGTTTCCAAGGCAGA...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR TCA 90 bp GGGAGGGTTGAGCCCGACCCACAACTGGTCAGGAATCCAGTGAACATCTCCACGTGGTCAGGAATCCAGTaGACATCTCCACGGACTGAT +
Preference number: 4 (lower is better)
Translates to: GRVEPDPQLVRNPVNISTWSGIQ*TSPRTD
Trigger: ATCAGTCCGTGGAGATGTTCACTGGATTCCTGACCA...CGTGGAGATGTTCACTGGATTCCTGACCAGTTGTGGGTCGGGCTCAACCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR TCA 90 bp GTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGAGCTTGTTTCGCTGTTaGATTTGGTTTGAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: VLFSWVAHLIRGTSLCSRSLFRC*IWFEWG
Trigger: ACCCCACTCAAACCAAATTCAACAGCGAAACAAGCT...CCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp CGTGCTGATTTACTCACAGGAGTATCTCTCCCATTGTCCTGTGAGGTCCCCGGCGAAATCTGGGGTCCCTaGGGTCGGCTTCTCCATGAT +
Preference number: 4 (lower is better)
Translates to: RADLLTGVSLPLSCEVPGEIWGP*GRLLHD
Trigger: ATCATGGAGAAGCCGACCTCAGGGACCCCAGATTTC...GCCGGGGACCTCACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp CGTGCTGATTTACTCACAGGAGTATCTCTCCCATTGTCCTGTGAGGTCCCCGGCTTTGGTCGCATGATCTaGGTGGGAGAGCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: RADLLTGVSLPLSCEVPGFGRMI*VGEPSR
Trigger: TCTGCTGGGCTCTCCCACTCAGATCATGCGACCAAA...GCCGGGGACCTCACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGGACAGCTCCAGCTCCTaGATTCTGCTTCTCAGCCCG +
Preference number: 4 (lower is better)
Translates to: VPGARINIDLSLLLHATLDSSSS*ILLLSP
Trigger: CGGGCTGAGAAGCAGAATTCAGGAGCTGGAGCTGTC...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp ATGGCTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCAGGCTCTTTGGTCTCATaGGCCCTGGAGAAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: MADLVGSYEIRPGLSTSAGSLVS*ALEKVA
Trigger: AGCCACCTTCTCCAGGGCTCATGAGACCAAAGAGCC...TGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp ATCATTACAAATCCTGAAAACCCAGAGGGAGGGTTGAGCCCGACCCACAACTGGTTCCCTGCGAGGAGCTaGCTGTCTGTTGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: IITNPENPEGGLSPTHNWFPARS*LSVGHG
Trigger: GCCATGGCCAACAGACAGTCAGCTCCTCGCAGGGAA...CCAGTTGTGGGTCGGGCTCAACCCTCCCTCTGGGTTTTCAGGATTTGTAATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp GAGGCAGGTCCTGCTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGACACAACAAGGATCCTaGCACTTGGAAAGAATCTTA +
Preference number: 4 (lower is better)
Translates to: EAGPAEELPEGRCRVLSLTQQGS*HLERIL
Trigger: TAAGATTCTTTCCAAGTGTCAGGATCCTTGTTGTGT...CAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAGCAGGACCTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTCCTGGGCGATGCTaGGATTTCACAGGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMLPGRC*DFTGPC
Trigger: ACAGGGACCTGTGAAATCTCAGCATCGCCCAGGAAG...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGGACCCTGGAAATGACTaGGGGGATAACCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMDPGND*GDNRSS
Trigger: GCTGCTTCGGTTATCCCCTCAGTCATTTCCAGGGTC...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGCCACCCAATACAACTTaGTTTCAGTGGCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLPPNTT*FQWPGE
Trigger: CTCTCCAGGCCACTGAAATCAAGTTGTATTGGGTGG...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp TACCAAAGTGAACCTACTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGCATCTGAGCCTCCACGTCCTGTaGAAGCTCATCGATTGTGAG +
Preference number: 4 (lower is better)
Translates to: YQSEPTGLPEQVLPLEHLSLHVL*KLIDCE
Trigger: CTCACAATCGATGAGCTTGCACAGGACGTGGAGGCT...CAGATGCTCCAGGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCACTTTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324058.9
CDS-3UTR GCA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGAGCCTCCACGTCCTGTaGAAGCTCATCGATTGTGAG +
Preference number: 4 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQSLHVL*KLIDCE
Trigger: CTCACAATCGATGAGCTTGCACAGGACGTGGAGGCT...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGGTCTGGAATTCCCGGTaGCTGTGGAAGGTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGVWNSR*LWKVLS
Trigger: AGACAGGACCTTCCACAGGCACCGGGAATTCCAGAC...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCCTCTTTCTCCAAATGTaGTTCTTTCACTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PGDQMWWHHAASRWLSKGLFLQM*FFHFCS
Trigger: GGAGCAGAAGTGAAAGAAGCACATTTGGAGAAAGAG...GCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTGACTTCCAGTCTTCAGGGGAGTCACTaGCAACTTTGCTTCATGTTG +
Preference number: 4 (lower is better)
Translates to: PTSPTGHCPAIPLWLTSSLQGSH*QLCFML
Trigger: CAACATGAAGCAAAGTTGGCAGTGACTCCCCTGAAG...ACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGTTCTTGCAGACGTTGTaGGGGGAGACCTGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMFLQTL*GETWFH
Trigger: GTGGAACCAGGTCTCCCCGCACAACGTCTGCAAGAA...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CTAGACCCAGACGGCAATTCATGGCCCGGGAGAATAAGTGGCTCTGCCTTGGAATTCTTGCAGACGTTGTaGGGGGAGACCTGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: LDPDGNSWPGRISGSALEFLQTL*GETWFH
Trigger: GTGGAACCAGGTCTCCCCGCACAACGTCTGCAAGAA...TTCCAAGGCAGAGCCACTTATTCTCCCGGGCCATGAATTGCCGTCTGGGTCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR GCA 90 bp CGTGCTGATTTACTCACAGGAGTATCTCTCCCATTGTCCTGTGAGGTCCCCGGCCGGGCTGTAATTCTTTaGTGTAGGAGGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RADLLTGVSLPLSCEVPGRAVIL*CRRLAW
Trigger: CCAGGCCAGCCTCCTACAGCAAAGAATTACAGCCCG...GCCGGGGACCTCACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGTCACCCACCGGACACTaGCCAGCCATTCCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: VPGARINIDLSLLLHATLSPTGH*PAIPLW
Trigger: CCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGA...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCACTGGGGCTTGACAAGAGCATaGTTTGCCCACTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LILLGAMRSVLDSRPQHWGLTRA*FAHFPS
Trigger: GGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCC...CCAGTGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CGTGCTGATTTACTCACAGGAGTATCTCTCCCATTGTCCTGTGAGGTCCCCGGCGGCTTGACAAGAGCATaGTTTGCCCACTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RADLLTGVSLPLSCEVPGGLTRA*FAHFPS
Trigger: GGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCC...GCCGGGGACCTCACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGAAGGTCGTCTTGGCTTaGTTTAATGGATTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VLFSWVAHLIRGTSLCSRKVVLA*FNGFPG
Trigger: CCCAGGAAATCCATTAAAGCAAGCCAAGACGACCTT...CCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GGGAGGGTTGAGCCCGACCCACAACTGGTCAGGAATCCAGTGAACATCTCCACGATCGTTGGGTTACGCTaGAAAGGTCGTCTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GRVEPDPQLVRNPVNISTIVGLR*KGRLGL
Trigger: CAAGCCAAGACGACCTTTGCAGCGTAACCCAACGAT...CGTGGAGATGTTCACTGGATTCCTGACCAGTTGTGGGTCGGGCTCAACCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR GCA 90 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTGACTTCCAGTATGCTCTGGGACTTTTaGCGTGTCACACCTACAAGA +
Preference number: 4 (lower is better)
Translates to: PTSPTGHCPAIPLWLTSSMLWDF*RVTPTR
Trigger: TCTTGTAGGTGTGACACGGCAAAAGTCCCAGAGCAT...ACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCATGAGTTCCCTCAACTaGCTACATTTCAGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSMSSLN*LHFSPF
Trigger: GAAAGGACTGAAATGTAGGCAGTTGAGGGAACTCAT...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGACCTGGGCTGCTAAGATaGCTGTGTTTTCAACCGACA +
Preference number: 4 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGPGLLR*LCFQPT
Trigger: TGTCGGTTGAAAACACAGGCATCTTAGCAGCCCAGG...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp GGTTTAGGGCTCCGCCTCCAGGGAAGTCCGCCATTGTTGTTTGCTGACAGTCCGCAGCTGGATTTTCACTaGATCTTCCTGGGCGATGCT +
Preference number: 4 (lower is better)
Translates to: GLGLRLQGSPPLLFADSPQLDFH*IFLGDA
Trigger: AGCATCGCCCAGGAAGATGCAGTGAAAATCCAGCTG...CGGACTGTCAGCAAACAACAATGGCGGACTTCCCTGGAGGCGGAGCCCTAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp GAGTCCGCCATCCTGTACTGTGCCCCAGGGAGCCACGGCACAAAGCTTGAGCCGTGCCATTGGTGCACATaGCGAAGACAAATCTACTTT +
Preference number: 4 (lower is better)
Translates to: ESAILYCAPGSHGTKLEPCHWCT*RRQIYF
Trigger: AAAGTAGATTTGTCTTCGGCATGTGCACCAATGGCA...CGGCTCAAGCTTTGTGCCGTGGCTCCCTGGGGCACAGTACAGGATGGCGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGGAGCATGAAGTCACAAGACGACGGACGTCTGAGCTCCTGGGACTCCTGGAGTATCCCGCTCGAGCCTaGATATTTTTGTCACCTCTC +
Preference number: 4 (lower is better)
Translates to: GEHEVTRRRTSELLGLLEYPARA*IFLSPL
Trigger: GAGAGGTGACAAAAATATCCAGGCTCGAGCGGGATA...CTCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTTGTGACTTCATGCTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGCTAGAGCGTGCATCTTaGCTTTTCCCTGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQLERAS*LFPGGA
Trigger: AGCACCTCCAGGGAAAAGCCAAGATGCACGCTCTAG...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GGCCTCTACCCACCAGATGCCAGTAGCAGTGTCCCAGCTGTGACAACCAAAAATTCTCCAGACCAGCGATaGAGGGGGAGAATCAGCACC +
Preference number: 4 (lower is better)
Translates to: GLYPPDASSSVPAVTTKNSPDQR*RGRIST
Trigger: GGTGCTGATTCTCCCCCTCCATCGCTGGTCTGGAGA...ATTTTTGGTTGTCACAGCTGGGACACTGCTACTGGCATCTGGTGGGTAGAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CAGAGGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTTCCTTGCAGGGCATTaGCTACACCAGTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: QREAEGGSPNQCCRSLPAFLAGH*LHQCFS
Trigger: GGAGAAACACTGGTGTAGCCAATGCCCTGCAAGGAA...AGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCGAAGACAATGAGCTTTaGAGGACACTGTCCATTTCA +
Preference number: 4 (lower is better)
Translates to: PGDQMWWHHAASRWLSKGEDNEL*RTLSIS
Trigger: TGAAATGGACAGTGTCCTCCAAAGCTCATTGTCTTC...GCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CGTGCTGATTTACTCACAGGAGTATCTCTCCCATTGTCCTGTGAGGTCCCCGGCGGGACGTTATCGACTTaGAGGGCAGGACAGGGCATT +
Preference number: 4 (lower is better)
Translates to: RADLLTGVSLPLSCEVPGGTLST*RAGQGI
Trigger: AATGCCCTGTCCTGCCCTCCAAGTCGATAACGTCCC...GCCGGGGACCTCACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGGAGCATGAAGTCACAAGACGACGGACGTCTGAGCTCCTGGGACTCCTGGAGTCCAGCGGTGATTTATaGACCTGGGAATTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: GEHEVTRRRTSELLGLLESSGDL*TWELLQ
Trigger: TTGCAGCAATTCCCAGGTCCATAAATCACCGCTGGA...CTCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTTGTGACTTCATGCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CACCATGTGCCCTTCCAAATGCTGGGGTCTACAGACCAGGCGAGGGGAGTCCGCGCTCCGGAGAATGAGTaGCCCTATTACATTTCTAAC +
Preference number: 4 (lower is better)
Translates to: HHVPFQMLGSTDQARGVRAPENE*PYYISN
Trigger: GTTAGAAATGTAATAGGGCCACTCATTCTCCGGAGC...GCGGACTCCCCTCGCCTGGTCTGTAGACCCCAGCATTTGGAAGGGCACATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGGAGCATGAAGTCACAAGACGACGGACGTCTGAGCTCCTGGGACTCCTGGAGATGGAGTCTATGAAATaGCTCCGGAGAATGAGTGGC +
Preference number: 4 (lower is better)
Translates to: GEHEVTRRRTSELLGLLEMESMK*LRRMSG
Trigger: GCCACTCATTCTCCGGAGCCATTTCATAGACTCCAT...CTCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTTGTGACTTCATGCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp TACCAAAGTGAACCTACTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGCATCTGAGTCTCTGTTCTCGGTaGAAGGAAGGGGTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: YQSEPTGLPEQVLPLEHLSLCSR*KEGVLD
Trigger: ATCCAGCACCCCTTCCTTCCACCGAGAACAGAGACT...CAGATGCTCCAGGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCACTTTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324058.9
CDS-3UTR CCA 90 bp CAGACGCTAGGTTGCCTGACATGGCCTGTGCTTTTAGTAACACCCCTTCCCATCGAAGTGCTCTTCTCCTaGGTCGCCCACCTGATTCGG +
Preference number: 4 (lower is better)
Translates to: QTLGCLTWPVLLVTPLPIEVLFS*VAHLIR
Trigger: CCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTC...GATGGGAAGGGGTGTTACTAAAAGCACAGGCCATGTCAGGCAACCTAGCGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp AGTCTGAGGCTGTCTCCAGCTCCAACAATGGATGTTTCCGGATCTGTCACCTTAGCCTGGGTCAGGGTCTaGTGTGTGTCGTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: SLRLSPAPTMDVSGSVTLAWVRV*CVSSKP
Trigger: GGGCTTGGACGACACACACCAGACCCTGACCCAGGC...TAAGGTGACAGATCCGGAAACATCCATTGTTGGAGCTGGAGACAGCCTCAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGAAAGGGATCACCGCAGTaGTTTCCAATCTGGGGATTC +
Preference number: 4 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGKGSPQ*FPIWGF
Trigger: GAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp TCTACCAAAGTGAACCTACTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGCATCGCCCGGGAGAATAAGTaGCTCTGCCTTGGAAACATG +
Preference number: 4 (lower is better)
Translates to: STKVNLLGCQSRSCPWSIARENK*LCLGNM
Trigger: CATGTTTCCAAGGCAGAGCCACTTATTCTCCCGGGC...GATGCTCCAGGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCACTTTGGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324058.9
CDS-3UTR CCA 90 bp CTAGACCCAGACGGCAATTCATGGCCCGGGAGAATAAGTGGCTCTGCCTTGGAATGCCCTTCCAAATGCTaGGGTCTACAGACCAGGCGA +
Preference number: 4 (lower is better)
Translates to: LDPDGNSWPGRISGSALECPSKC*GLQTRR
Trigger: TCGCCTGGTCTGTAGACCCCAGCATTTGGAAGGGCA...TTCCAAGGCAGAGCCACTTATTCTCCCGGGCCATGAATTGCCGTCTGGGTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGGGAGCATCTGATGGGTaGCAAGGAGCCACCATGTGC +
Preference number: 4 (lower is better)
Translates to: VPGARINIDLSLLLHATLGASDG*QGATMC
Trigger: GCACATGGTGGCTCCTTGCCACCCATCAGATGCTCC...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGTGGTTTGAGTGGGGTTaGGGTTGCCGTAGGGACTCA +
Preference number: 4 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMWFEWG*GCRRDS
Trigger: TGAGTCCCTACGGCAACCCCAACCCCACTCAAACCA...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GGCCTCTACCCACCAGATGCCAGTAGCAGTGTCCCAGCTGTGACAACCAAAAATAGGTCTCTGCCCCCTTaGGCCTTCAAAGTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: GLYPPDASSSVPAVTTKNRSLPP*AFKVPE
Trigger: CTCTGGCACTTTGAAGGCCCAAGGGGGCAGAGACCT...ATTTTTGGTTGTCACAGCTGGGACACTGCTACTGGCATCTGGTGGGTAGAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GGGGAGCATGAAGTCACAAGACGACGGACGTCTGAGCTCCTGGGACTCCTGGAGTGGCTGCCGATCCCTTaGTTTCTGGTAATTGCACTT +
Preference number: 4 (lower is better)
Translates to: GEHEVTRRRTSELLGLLEWLPIP*FLVIAL
Trigger: AAGTGCAATTACCAGAAACCAAGGGATCGGCAGCCA...CTCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTTGTGACTTCATGCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp ACAAAACAATTCTCCATGGCTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGAGGGAGGCATCTGGCGTaGGGACGAGGACTCGGGCCT +
Preference number: 4 (lower is better)
Translates to: TKQFSMADLVGSYEIRPGGRHLA*GRGLGP
Trigger: AGGCCCGAGTCCTCGTCCCCACGCCAGATGCCTCCC...TCCAGGACGGATCTCATAGCTCCCAACAAGATCAGCCATGGAGAATTGTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp ACTTCTTCCCCAGCAGCATCCAGCCAGACACTCGCACAGCAGTCACTAAATGCAAGTCCTCAGTCCACCTaGTCCCAGGGACAGTCATGC +
Preference number: 4 (lower is better)
Translates to: TSSPAASSQTLAQQSLNASPQST*SQGQSC
Trigger: GCATGACTGTCCCTGGGACCAGGTGGACTGAGGACT...TGCATTTAGTGACTGCTGTGCGAGTGTCTGGCTGGATGCTGCTGGGGAAGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAGCCAGTGGGTGCTTTaGGGTTTTGATTTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSSQWVL*GFDFKR
Trigger: TCTTTTGAAATCAAAACCCCAAAGCACCCACTGGCT...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGAAGCCAAGGCCATTTTaGTCGCATGATCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLKPRPF*SHDLSG
Trigger: CCCACTCAGATCATGCGACCAAAATGGCCTTGGCTT...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp TTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTGGAAGACTTTTTGTGCAGGTTaGGAACTCCATCCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: FSWVAHLIRGTSLCSRWKTFCAG*ELHPSP
Trigger: TGGGCTAGGATGGAGTTCCCAACCTGCACAAAAAGT...CTTCCACCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp GGTTTAGGGCTCCGCCTCCAGGGAAGTCCGCCATTGTTGTTTGCTGACAGTCCGTCCAAGCACAGCAACTaGGCCGTGATGCTCTTTAAC +
Preference number: 4 (lower is better)
Translates to: GLGLRLQGSPPLLFADSPSKHSN*AVMLFN
Trigger: GTTAAAGAGCATCACGGCCCAGTTGCTGTGCTTGGA...CGGACTGTCAGCAAACAACAATGGCGGACTTCCCTGGAGGCGGAGCCCTAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp GTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAAGGGCTCAGCTGGCTGTCCAAGATGAAAAGGTTCTaGAGATGGATGATGGTGATG +
Preference number: 4 (lower is better)
Translates to: VVAPRCISLAQQGLSWLSKMKRF*RWMMVM
Trigger: CATCACCATCATCCATCTCCAGAACCTTTTCATCTT...GGACAGCCAGCTGAGCCCTTGCTGAGCCAGCGAGATGCAGCGTGGTGCCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp ATGGCTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCAGGGTGCCAGCAGCTGTaGGACAGGGAAATGAGGAGT +
Preference number: 4 (lower is better)
Translates to: MADLVGSYEIRPGLSTSAGCQQL*DREMRS
Trigger: ACTCCTCATTTCCCTGTCCCACAGCTGCTGGCACCC...TGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp ACTTCTTCCCCAGCAGCATCCAGCCAGACACTCGCACAGCAGTCACTAAATGCAGGGGAGGGAGCGAGCTaGCTTCATTCACCTCTGACT +
Preference number: 4 (lower is better)
Translates to: TSSPAASSQTLAQQSLNAGEGAS*LHSPLT
Trigger: AGTCAGAGGTGAATGAAGCCAGCTCGCTCCCTCCCC...TGCATTTAGTGACTGCTGTGCGAGTGTCTGGCTGGATGCTGCTGGGGAAGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp GGTTTAGGGCTCCGCCTCCAGGGAAGTCCGCCATTGTTGTTTGCTGACAGTCCGCCAAGCCATAGCCTGTaGAAACCAGGCAGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: GLGLRLQGSPPLLFADSPPSHSL*KPGSFF
Trigger: GAAAAAGCTGCCTGGTTTCCACAGGCTATGGCTTGG...CGGACTGTCAGCAAACAACAATGGCGGACTTCCCTGGAGGCGGAGCCCTAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp GACAAGCAGGTAGCAGAGCTGGAAGTAGAATCAAGGCTTTGCAATGCCCAGTTGACCTGCTGGCTTGCCTaGGAAGGGCAATGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: DKQVAELEVESRLCNAQLTCWLA*EGQWQG
Trigger: GCCCTGCCATTGCCCTTCCCAGGCAAGCCAGCAGGT...CAACTGGGCATTGCAAAGCCTTGATTCTACTTCCAGCTCTGCTACCTGCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 72 bp TCCTGTGAGGTCCCCGGCGCCAGGATCAACATTGACTaGTCTCTTCTCCTTCATGCCACATTGCCTGGCATC +
Preference number: 4 (lower is better)
Translates to: SCEVPGARINID*SLLLHATLPGI
Trigger: GATGCCAGGCAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGACCTCACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGCTGGCTTCATCCCAATaGGGCAGTGTCCCTGGGTTA +
Preference number: 4 (lower is better)
Translates to: VPGARINIDLSLLLHATLLASSQ*GSVPGL
Trigger: TAACCCAGGGACACTGCCTCATTGGGATGAAGCCAG...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGACTCTCTTGGTCTCCGTaGAGTTTGGTGTTGTCATGT +
Preference number: 4 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGLSWSP*SLVLSC
Trigger: ACATGACAACACCAAACTTCACGGAGACCAAGAGAG...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CACCATGTGCCCTTCCAAATGCTGGGGTCTACAGACCAGGCGAGGGGAGTCCGCTCATGTTGCTTTTTCTaGAGTTCTTCAAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: HHVPFQMLGSTDQARGVRSCCFF*SSSSLA
Trigger: GGCCAAGCTTGAAGAACTTCAGAAAAAGCAACATGA...GCGGACTCCCCTCGCCTGGTCTGTAGACCCCAGCATTTGGAAGGGCACATGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR TCA 90 bp GCTGCAAAGGTCGTCTTGGCTTGCTTTAATGGATTTCCTGGGTTGCCTTTCTGCCCAGTGCCACGTCGTTaGGCATGTTCTGCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: AAKVVLACFNGFPGLPFCPVPRR*ACSAPA
Trigger: AGCTGGCGCAGAACATGCTCAACGACGTGGCACTGG...GCAGAAAGGCAACCCAGGAAATCCATTAAAGCAAGCCAAGACGACCTTTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGATGTCTAAGCTCTTGGTaGAAAGCCAGGATCCTTGCT +
Preference number: 4 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGCLSSW*KARILA
Trigger: AGCAAGGATCCTGGCTTTTCACCAAGAGCTTAGACA...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGAAATGGCTCCGGAGAATaGGTGGCCCTATTACATTTC +
Preference number: 4 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGNGSGE*VALLHF
Trigger: GAAATGTAATAGGGCCACTCATTCTCCGGAGCCATT...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CTAGACCCAGACGGCAATTCATGGCCCGGGAGAATAAGTGGCTCTGCCTTGGAATCTTGTTGGGAGCTATaGGATCCGTCCTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: LDPDGNSWPGRISGSALESCWEL*DPSWTL
Trigger: GAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGA...TTCCAAGGCAGAGCCACTTATTCTCCCGGGCCATGAATTGCCGTCTGGGTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR TCA 90 bp ACTTCTTCCCCAGCAGCATCCAGCCAGACACTCGCACAGCAGTCACTAAATGCAATGGGAACGATGCAGTaGCTGCTTGCAGCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: TSSPAASSQTLAQQSLNAMGTMQ*LLAAGL
Trigger: CAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCAT...TGCATTTAGTGACTGCTGTGCGAGTGTCTGGCTGGATGCTGCTGGGGAAGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGTGGAACTCAATGTGCTaGGGCTGCCTTTCTTACGTC +
Preference number: 4 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQWNSMC*GCLSYV
Trigger: GACGTAAGAAAGGCAGCCTCAGCACATTGAGTTCCA...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp AGTCTGAGGCTGTCTCCAGCTCCAACAATGGATGTTTCCGGATCTGTCACCTTAAAGACGACGGACGTCTaGGCTCCTGGGACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SLRLSPAPTMDVSGSVTLKTTDV*APGTPG
Trigger: TCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTT...TAAGGTGACAGATCCGGAAACATCCATTGTTGGAGCTGGAGACAGCCTCAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGAACATCTCCACGGACTaGTGGTTTCACTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMNISTD*WFHCRQ
Trigger: CTGCCTGCAGTGAAACCATCAGTCCGTGGAGATGTT...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR TCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGGATCATTACAAATCCTaGAAACCCAGAGGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHEDHYKS*KPRGRV
Trigger: AACCCTCCCTCTGGGTTTTCAGGATTTGTAATGATC...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR TCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGAGACCGGATGCTTCTTaGTGCGGCATCTCATCCTCT +
Preference number: 4 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGRPDAS*CGISSS
Trigger: AGAGGATGAGATGCCGCATCAAGAAGCATCCGGTCT...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGCAAGCTCATCGATTGTaGGTGCACACCTGTTGTGTC +
Preference number: 4 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQQAHRL*VHTCCV
Trigger: GACACAACAGGTGTGCACTCACAATCGATGAGCTTG...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CAGACGCTAGGTTGCCTGACATGGCCTGTGCTTTTAGTAACACCCCTTCCCATCTCCAACCACCAGATCTaGCTTCCAGTCACCACCCAC +
Preference number: 4 (lower is better)
Translates to: QTLGCLTWPVLLVTPLPISNHQI*LPVTTH
Trigger: GTGGGTGGTGACTGGAAGTCAGATCTGGTGGTTGGA...GATGGGAAGGGGTGTTACTAAAAGCACAGGCCATGTCAGGCAACCTAGCGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp GTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTGGAAAGAGACTATGTaGCTGTATTCCCATGGTTCT +
Preference number: 4 (lower is better)
Translates to: VLFSWVAHLIRGTSLCSRWKETM*LYSHGS
Trigger: AGAACCATGGGAATACAGTCACATAGTCTCTTTCCA...CCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp CAGGAATCCAGTGAACATCTCCACGGACTGATGGTTTCACTGCAGGCAGGCCCCGAGGTTCTACCAAAGTaGACTTGCCAGCCTCGCTTA +
Preference number: 4 (lower is better)
Translates to: QESSEHLHGLMVSLQAGPEVLPK*TCQPRL
Trigger: TAAGCGAGGCTGGCAAGTTCACTTTGGTAGAACCTC...GGGGCCTGCCTGCAGTGAAACCATCAGTCCGTGGAGATGTTCACTGGATTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp TGTCCTCTCTCTGTCATGTTCCTGATGCTCAAAGCTAATGACATTGTCCCAAAAAGCACTGCCAGCCCCTaGTGCCCGGCTGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: CPLSVMFLMLKANDIVPKSTASP*CPAAGW
Trigger: CCACCCTGCAGCCGGGCAGCAGGGGCTGGCAGTGCT...TTTTGGGACAATGTCATTAGCTTTGAGCATCAGGAACATGACAGAGAGAGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp TTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGTGGAAGTTTTCCAGGGTGACTTaGTCCATCGTGTCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: FSWVAHLIRGTSLCSRWKFSRVT*SIVSLD
Trigger: ATCCAAAGACACGATGGAGCAAGTCACCCTGGAAAA...CTTCCACCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CGTGCTGATTTACTCACAGGAGTATCTCTCCCATTGTCCTGTGAGGTCCCCGGCACCCTGCGTAGAAGGTaGTCGTTCTCCCCACTTAAG +
Preference number: 4 (lower is better)
Translates to: RADLLTGVSLPLSCEVPGTLRRR*SFSPLK
Trigger: CTTAAGTGGGGAGAACGAGCACCTTCTACGCAGGGT...GCCGGGGACCTCACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGGTCTGGAATTCCCGGTaGCTGTGGAAGGTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: VPGARINIDLSLLLHATLVWNSR*LWKVLS
Trigger: AGACAGGACCTTCCACAGGCACCGGGAATTCCAGAC...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp TTGTTGCAGCCCATTGGTCTGCAGAGCGATCAAACCACACTACCTCAGCGTGTCGTCTGGAATTCCCGGTaGCTGTGGAAGGTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: LLQPIGLQSDQTTLPQRVVWNSR*LWKVLS
Trigger: AGACAGGACCTTCCACAGGCACCGGGAATTCCAGAC...GACACGCTGAGGTAGTGTGGTTTGATCGCTCTGCAGACCAATGGGCTGCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp GAGGCAGGTCCTGCTGAAGAGCTTCCGGAGGGGAGGTGTCGGGTCCTGTCGCTGAATGAGGGCTCTGATTaGTACCAATTTCTTAAAGCA +
Preference number: 4 (lower is better)
Translates to: EAGPAEELPEGRCRVLSLNEGSD*YQFLKA
Trigger: TGCTTTAAGAAATTGGTAGCAATCAGAGCCCTCATT...CAGCGACAGGACCCGACACCTCCCCTCCGGAAGCTCTTCAGCAGGACCTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR GCA 90 bp GGTTTAGGGCTCCGCCTCCAGGGAAGTCCGCCATTGTTGTTTGCTGACAGTCCGTCCTTCATGCCACATTaGCTGGCATCCAGTGGATAT +
Preference number: 4 (lower is better)
Translates to: GLGLRLQGSPPLLFADSPSFMPH*LASSGY
Trigger: ATATCCACTGGATGCCAGGCAATGTGGCATGAAGGA...CGGACTGTCAGCAAACAACAATGGCGGACTTCCCTGGAGGCGGAGCCCTAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp CTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCACTGGGATGCAGTGACTGCTTaGAGCTGGCTTGACAAGAGC +
Preference number: 4 (lower is better)
Translates to: LILLGAMRSVLDSRPQHWDAVTA*SWLDKS
Trigger: GCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATC...CCAGTGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp ATGGCTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCAGCTGGATGGGAACGATaGAGTGACTGCTTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: MADLVGSYEIRPGLSTSAAGWER*SDCLQL
Trigger: CAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGC...TGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGGGATCACCAAACCAGTaGTGCAGGTCACTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMGSPNQ*CRSLPA
Trigger: AGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCC...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGTCCTCGGCAGCCCCTTaGAAATTACGATCAAGGTGC +
Preference number: 4 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMSSAAP*KLRSRC
Trigger: GCACCTTGATCGTAATTTGCAAGGGGCTGCCGAGGA...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp CTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCACTGGTGTTTTCACTCACTGTaGGACCCCACACTCCCATCG +
Preference number: 4 (lower is better)
Translates to: LILLGAMRSVLDSRPQHWCFHSL*DPTLPS
Trigger: CGATGGGAGTGTGGGGTCGCACAGTGAGTGAAAACA...CCAGTGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp GACAAGCAGGTAGCAGAGCTGGAAGTAGAATCAAGGCTTTGCAATGCCCAGTTGCTGAACCTACTGGGTTaGCAGAGCAGGTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: DKQVAELEVESRLCNAQLLNLLG*QSRSCP
Trigger: GGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCAG...CAACTGGGCATTGCAAAGCCTTGATTCTACTTCCAGCTCTGCTACCTGCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp GCGAGGGGAGTCCGCCATCCTGTACTGTGCCCCAGGGAGCCACGGCACAAAGCTAGGAAAGAGTTCACATaGATACAACTTTTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: ARGVRHPVLCPREPRHKARKEFT*IQLFVQ
Trigger: CTGCACAAAAAGTTGTATGCATGTGAACTCTTTCCT...AGCTTTGTGCCGTGGCTCCCTGGGGCACAGTACAGGATGGCGGACTCCCCTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp ATGGCTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCACTGGCAGGATCACCATaGTGTCTAAAGGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: MADLVGSYEIRPGLSTSALAGSP*CLKVWG
Trigger: GCCCCAGACCTTTAGACAGCATGGTGATCCTGCCAG...TGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp GCTGCAAAGGTCGTCTTGGCTTGCTTTAATGGATTTCCTGGGTTGCCTTTCTGCCTCAGCTCCAGGCTCTaGCACAGCGGAGCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: AAKVVLACFNGFPGLPFCLSSRL*HSGAQS
Trigger: GCTTTGAGCTCCGCTGTGGCAGAGCCTGGAGCTGAG...GCAGAAAGGCAACCCAGGAAATCCATTAAAGCAAGCCAAGACGACCTTTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp CGTGCTGATTTACTCACAGGAGTATCTCTCCCATTGTCCTGTGAGGTCCCCGGCATGAGGCAGTGTCCCTaGGTTACCAGGAACTTCGCT +
Preference number: 4 (lower is better)
Translates to: RADLLTGVSLPLSCEVPGMRQCP*VTRNFA
Trigger: AGCGAAGTTCCTGGTAACCCAGGGACACTGCCTCAT...GCCGGGGACCTCACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp ACTTCTTCCCCAGCAGCATCCAGCCAGACACTCGCACAGCAGTCACTAAATGCAGTGGAGGGTTTGGGCTaGCTTCATCCCAATGAGGCA +
Preference number: 4 (lower is better)
Translates to: TSSPAASSQTLAQQSLNAVEGLG*LHPNEA
Trigger: TGCCTCATTGGGATGAAGCCAGCCCAAACCCTCCAC...TGCATTTAGTGACTGCTGTGCGAGTGTCTGGCTGGATGCTGCTGGGGAAGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp AATGGAGCGATCATTACAAATCCTGAAAACCCAGAGGGAGGGTTGAGCCCGACCTCCCTCTCCAGGACATaGACCCTGCGTAGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: NGAIITNPENPEGGLSPTSLSRT*TLRRRC
Trigger: GCACCTTCTACGCAGGGTCCATGTCCTGGAGAGGGA...GGTCGGGCTCAACCCTCCCTCTGGGTTTTCAGGATTTGTAATGATCGCTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGCTAGAGCGTGCATCTTaGCTTTTCCCTGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGLERAS*LFPGGA
Trigger: AGCACCTCCAGGGAAAAGCCAAGATGCACGCTCTAG...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp ATCATTACAAATCCTGAAAACCCAGAGGGAGGGTTGAGCCCGACCCACAACTGGTCTCCAGACCAGCGATaGAGGGGGAGAATCAGCACC +
Preference number: 4 (lower is better)
Translates to: IITNPENPEGGLSPTHNWSPDQR*RGRIST
Trigger: GGTGCTGATTCTCCCCCTCCATCGCTGGTCTGGAGA...CCAGTTGTGGGTCGGGCTCAACCCTCCCTCTGGGTTTTCAGGATTTGTAATGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGCGAGGGAAGCTATCTTaGCCTTCAGGGGAGTCACTG +
Preference number: 4 (lower is better)
Translates to: VPGARINIDLSLLLHATLRGKLS*PSGESL
Trigger: CAGTGACTCCCCTGAAGGCCAAGATAGCTTCCCTCG...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CAGACGCTAGGTTGCCTGACATGGCCTGTGCTTTTAGTAACACCCCTTCCCATCCGAGGGAAGCTATCTTaGCCTTCAGGGGAGTCACTG +
Preference number: 4 (lower is better)
Translates to: QTLGCLTWPVLLVTPLPIRGKLS*PSGESL
Trigger: CAGTGACTCCCCTGAAGGCCAAGATAGCTTCCCTCG...GATGGGAAGGGGTGTTACTAAAAGCACAGGCCATGTCAGGCAACCTAGCGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp ATGGCTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCAGAGCTCAGAGGGTGCTaGGACGTTATCGACTTGGAG +
Preference number: 4 (lower is better)
Translates to: MADLVGSYEIRPGLSTSAELRGC*DVIDLE
Trigger: CTCCAAGTCGATAACGTCCCAGCACCCTCTGAGCTC...TGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CTGGAGCATCTGATGGGTGGCAAGGAGCCACCATGTGCCCTTCCAAATGCTGGGTCCAGCGGTGATTTATaGACCTGGGAATTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LEHLMGGKEPPCALPNAGSSGDL*TWELLQ
Trigger: TTGCAGCAATTCCCAGGTCCATAAATCACCGCTGGA...CCCAGCATTTGGAAGGGCACATGGTGGCTCCTTGCCACCCATCAGATGCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp CAGGAATCCAGTGAACATCTCCACGGACTGATGGTTTCACTGCAGGCAGGCCCCAAATGTCTCCAGACATaGCCAGATTTTCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: QESSEHLHGLMVSLQAGPKCLQT*PDFPWG
Trigger: CCCCCAGGGAAAATCTGGCCATGTCTGGAGACATTT...GGGGCCTGCCTGCAGTGAAACCATCAGTCCGTGGAGATGTTCACTGGATTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGAAGGGATCACCGCAGTaGTTTCCAATCTGGGGATTC +
Preference number: 4 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQKGSPQ*FPIWGF
Trigger: GAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GCTGCAAAGGTCGTCTTGGCTTGCTTTAATGGATTTCCTGGGTTGCCTTTCTGCCACTCCCATCGCCCCTaGGCTGCTAAGATGCCTGTG +
Preference number: 4 (lower is better)
Translates to: AAKVVLACFNGFPGLPFCHSHRP*AAKMPV
Trigger: CACAGGCATCTTAGCAGCCCAGGGGCGATGGGAGTG...GCAGAAAGGCAACCCAGGAAATCCATTAAAGCAAGCCAAGACGACCTTTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp CGTGCTGATTTACTCACAGGAGTATCTCTCCCATTGTCCTGTGAGGTCCCCGGCGATGACCATGATCAGTaGGTTCGGCCCCTTCAACTG +
Preference number: 4 (lower is better)
Translates to: RADLLTGVSLPLSCEVPGDDHDQ*VRPLQL
Trigger: CAGTTGAAGGGGCCGAACCCACTGATCATGGTCATC...GCCGGGGACCTCACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CTGGAGCATCTGATGGGTGGCAAGGAGCCACCATGTGCCCTTCCAAATGCTGGGATCAATGAGTCCTTATaGCAGAGTGCACTCCGAGAC +
Preference number: 4 (lower is better)
Translates to: LEHLMGGKEPPCALPNAGINESL*QSALRD
Trigger: GTCTCGGAGTGCACTCTGCCATAAGGACTCATTGAT...CCCAGCATTTGGAAGGGCACATGGTGGCTCCTTGCCACCCATCAGATGCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp CGTGCTGATTTACTCACAGGAGTATCTCTCCCATTGTCCTGTGAGGTCCCCGGCGGGCAAGAAAACATGTaGCTCACTGACGTTTCCCCG +
Preference number: 4 (lower is better)
Translates to: RADLLTGVSLPLSCEVPGGQENM*LTDVSP
Trigger: CGGGGAAACGTCAGTGAGCCACATGTTTTCTTGCCC...GCCGGGGACCTCACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGTGCCAGTACCCGCTGTaGACTGGAAACTCTCTAAGG +
Preference number: 4 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGCQYPL*TGNSLR
Trigger: CCTTAGAGAGTTTCCAGTCCACAGCGGGTACTGGCA...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp GTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTCTGTTCTCGGCCCAATTGCATTCAATaGTCAATGCACAACATCTCC +
Preference number: 4 (lower is better)
Translates to: VLFSWVAHLIRGTSLCSRPNCIQ*SMHNIS
Trigger: GGAGATGTTGTGCATTGACCATTGAATGCAATTGGG...CCGAGAACAGAGACTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp CTGGAGCATCTGATGGGTGGCAAGGAGCCACCATGTGCCCTTCCAAATGCTGGGACTGACAAACCTCAGTaGGAAGCTGGAAACCACACT +
Preference number: 4 (lower is better)
Translates to: LEHLMGGKEPPCALPNAGTDKPQ*EAGNHT
Trigger: AGTGTGGTTTCCAGCTTCCCACTGAGGTTTGTCAGT...CCCAGCATTTGGAAGGGCACATGGTGGCTCCTTGCCACCCATCAGATGCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp TTGTTGCAGCCCATTGGTCTGCAGAGCGATCAAACCACACTACCTCAGCGTGTCCTGTGTGCAGTGGGATaGACTGTTCACCCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: LLQPIGLQSDQTTLPQRVLCAVG*TVHPRS
Trigger: ACTCCTGGGGTGAACAGTCCATCCCACTGCACACAG...GACACGCTGAGGTAGTGTGGTTTGATCGCTCTGCAGACCAATGGGCTGCAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp ATCATTACAAATCCTGAAAACCCAGAGGGAGGGTTGAGCCCGACCCACAACTGGGCCCAGCAAGTAAACTaGGGAGGGGAGGCCACTTTC +
Preference number: 4 (lower is better)
Translates to: IITNPENPEGGLSPTHNWAQQVN*GGEATF
Trigger: GAAAGTGGCCTCCCCTCCCCAGTTTACTTGCTGGGC...CCAGTTGTGGGTCGGGCTCAACCCTCCCTCTGGGTTTTCAGGATTTGTAATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 72 bp CCGCCATTGTTGTTTGCTGACAGTCCGTGTGACAAATaGTTTTCTGCTGCAGAGCCAGGCTGGACCGTCTGG +
Preference number: 4 (lower is better)
Translates to: PPLLFADSPCDK*FSAAEPGWTVW
Trigger: CCAGACGGTCCAGCCTGGCTCTGCAGCAGAAAACAATTTGTCACACGGACTGTCAGCAAACAACAATGGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 72 bp GGGGAGGCCACTTTCCCTAGTCTCGGAGCCAATAACTaGCAGAACCCAGATTGCAGCCTAGCTATTCTGGTC +
Preference number: 4 (lower is better)
Translates to: GEATFPSLGANN*QNPDCSLAILV
Trigger: GACCAGAATAGCTAGGCTGCAATCTGGGTTCTGCAAGTTATTGGCTCCGAGACTAGGGAAAGTGGCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGCTCTCTTGGTCTCCGTaGAGTTTGGTGTTGTCATGT +
Preference number: 4 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQLSWSP*SLVLSC
Trigger: ACATGACAACACCAAACTTCACGGAGACCAAGAGAG...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCACTGGTCCAGTTTTCCAGGGTaGCTTGCTCCATCGTGTCTT +
Preference number: 4 (lower is better)
Translates to: LILLGAMRSVLDSRPQHWSSFPG*LAPSCL
Trigger: AAGACACGATGGAGCAAGTCACCCTGGAAAACTGGA...CCAGTGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp ACAAAACAATTCTCCATGGCTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGAGACCTGGTTCCACAGTaGCCGCTGCCAGGCACGTTC +
Preference number: 4 (lower is better)
Translates to: TKQFSMADLVGSYEIRPGDLVPQ*PLPGTF
Trigger: GAACGTGCCTGGCAGCGGTCACTGTGGAACCAGGTC...TCCAGGACGGATCTCATAGCTCCCAACAAGATCAGCCATGGAGAATTGTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGTGTCTAAGCTCTTGGTaGAAAGCCAGGATCCTTGCT +
Preference number: 4 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQCLSSW*KARILA
Trigger: AGCAAGGATCCTGGCTTTTCACCAAGAGCTTAGACA...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CAGAGGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTTTCCTATGCTGCCTTaGCATTGCCAAAGCCAAACT +
Preference number: 4 (lower is better)
Translates to: QREAEGGSPNQCCRSLPAFPMLP*HCQSQT
Trigger: AGTTTGGCTTTGGCAATGTCAAGGCAGCATAGGAAA...AGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp TTGTTGCAGCCCATTGGTCTGCAGAGCGATCAAACCACACTACCTCAGCGTGTCTCTTGTTGGGAGCTATaGGATCCGTCCTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: LLQPIGLQSDQTTLPQRVSCWEL*DPSWTL
Trigger: GAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGA...GACACGCTGAGGTAGTGTGGTTTGATCGCTCTGCAGACCAATGGGCTGCAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp ACTTCTTCCCCAGCAGCATCCAGCCAGACACTCGCACAGCAGTCACTAAATGCACCATTCCTTTGTGGCTaGCTTCCAGTTGTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: TSSPAASSQTLAQQSLNAPFLCG*LPVVPS
Trigger: GCTTGGGACAACTGGAAGTCAGCCACAAAGGAATGG...TGCATTTAGTGACTGCTGTGCGAGTGTCTGGCTGGATGCTGCTGGGGAAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTGACTTCCAGTTCTCTGTCATGTTCCTaGTGCTCAAAGCTAATGACA +
Preference number: 4 (lower is better)
Translates to: PTSPTGHCPAIPLWLTSSSLSCS*CSKLMT
Trigger: TGTCATTAGCTTTGAGCATCAGGAACATGACAGAGA...ACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp ACTTCTTCCCCAGCAGCATCCAGCCAGACACTCGCACAGCAGTCACTAAATGCACTGTTGAATTTGGTTTaGGTGGGGTTGGGGTTGCCG +
Preference number: 4 (lower is better)
Translates to: TSSPAASSQTLAQQSLNALLNLV*VGLGLP
Trigger: CGGCAACCCCAACCCCACTCAAACCAAATTCAACAG...TGCATTTAGTGACTGCTGTGCGAGTGTCTGGCTGGATGCTGCTGGGGAAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp TGTCCTCTCTCTGTCATGTTCCTGATGCTCAAAGCTAATGACATTGTCCCAAAATCCTCCCCGCGGTGGTaGGAGCAGGACCTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: CPLSVMFLMLKANDIVPKSSPRW*EQDLVS
Trigger: CGAGACCAGGTCCTGCTCTCACCACCGCGGGGAGGA...TTTTGGGACAATGTCATTAGCTTTGAGCATCAGGAACATGACAGAGAGAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp CTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCACTGGATGGATCTGGCCTTCTaGGAACTTCTAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LILLGAMRSVLDSRPQHWMDLAF*ELLAPL
Trigger: CAGAGGAGCTAGAAGTTCTCAGAAGGCCAGATCCAT...CCAGTGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp CAGAGGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTGTGAGTTTGCAACATTaGCTTCCCGGAGATTTCAAG +
Preference number: 4 (lower is better)
Translates to: QREAEGGSPNQCCRSLPAVSLQH*LPGDFK
Trigger: CTTGAAATCTCCGGGAAGTCAATGTTGCAAACTCAC...AGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp CAGACGCTAGGTTGCCTGACATGGCCTGTGCTTTTAGTAACACCCCTTCCCATCACAGCAACTGGGCCGTaGTGCTCTTTAACTGCAGAG +
Preference number: 4 (lower is better)
Translates to: QTLGCLTWPVLLVTPLPITATGP*CSLTAE
Trigger: CTCTGCAGTTAAAGAGCATCACGGCCCAGTTGCTGT...GATGGGAAGGGGTGTTACTAAAAGCACAGGCCATGTCAGGCAACCTAGCGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp CTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCACTGGCTAAGGTCTGTAATGTaGTATGGGGCCTGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: LILLGAMRSVLDSRPQHWLRSVM*YGACLL
Trigger: CAACAGGCAGGCCCCATATCACATTACAGACCTTAG...CCAGTGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGGGTTGCACCACAATGTaGATGCACTCTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: VPGARINIDLSLLLHATLGCTTM*MHSVPL
Trigger: CAGTGGCACAGAGTGCATTCACATTGTGGTGCAACC...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp GAGTCCGCCATCCTGTACTGTGCCCCAGGGAGCCACGGCACAAAGCTTGAGCCGTCTAATTTTGCAAGATaGAAAGGTTCTGGAGATGGA +
Preference number: 4 (lower is better)
Translates to: ESAILYCAPGSHGTKLEPSNFAR*KGSGDG
Trigger: TCCATCTCCAGAACCTTTTCATCTTGCAAAATTAGA...CGGCTCAAGCTTTGTGCCGTGGCTCCCTGGGGCACAGTACAGGATGGCGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGGATGCTTACACTAGATaGAGTCTGAGGCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQDAYTR*SLRLSP
Trigger: TGGAGACAGCCTCAGACTTCATCTAGTGTAAGCATC...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp TCCTGTGTGCAGTGGGATGGACTGTTCACCCCAGGAGTGCTCCATTGGCCTTGCACCAGCTTTGGTGCTTaGTTTCACACCGAGAAACTA +
Preference number: 4 (lower is better)
Translates to: SCVQWDGLFTPGVLHWPCTSFGA*FHTEKL
Trigger: TAGTTTCTCGGTGTGAAATCAAGCACCAAAGCTGGT...GCAAGGCCAATGGAGCACTCCTGGGGTGAACAGTCCATCCCACTGCACACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp CACCATGTGCCCTTCCAAATGCTGGGGTCTACAGACCAGGCGAGGGGAGTCCGCCAATCCCAAGTCTACTaGGTTCTTGAAAGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: HHVPFQMLGSTDQARGVRQSQVY*VLESSF
Trigger: AAAACTGCTTTCAAGAACTCAGTAGACTTGGGATTG...GCGGACTCCCCTCGCCTGGTCTGTAGACCCCAGCATTTGGAAGGGCACATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp ATCATTACAAATCCTGAAAACCCAGAGGGAGGGTTGAGCCCGACCCACAACTGGCCAGGACATGGACCCTaGGTAGAAGGTGCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: IITNPENPEGGLSPTHNWPGHGP*VEGARS
Trigger: AGAACGAGCACCTTCTACGCAGGGTCCATGTCCTGG...CCAGTTGTGGGTCGGGCTCAACCCTCCCTCTGGGTTTTCAGGATTTGTAATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR GCA 90 bp GGCAGAGTGCACTCCGAGACAACCGTCAGTGAAATACCTAAGTCGAAGGAACTGGTGGAAGGTCCTGTCTaGCCTGCAGCCAGACTCATT +
Preference number: 4 (lower is better)
Translates to: GRVHSETTVSEIPKSKELVEGPV*PAARLI
Trigger: AATGAGTCTGGCTGCAGGGCAGACAGGACCTTCCAC...CAGTTCCTTCGACTTAGGTATTTCACTGACGGTTGTCTCGGAGTGCACTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp GCTGCAAAGGTCGTCTTGGCTTGCTTTAATGGATTTCCTGGGTTGCCTTTCTGCTGTCTGTGCAGCTCCTaGAGCAGGTGGGTGATCAGG +
Preference number: 4 (lower is better)
Translates to: AAKVVLACFNGFPGLPFCCLCSS*SRWVIR
Trigger: CCTGATCACCCACCTGCTGCAGGAGCTGCACAGACA...GCAGAAAGGCAACCCAGGAAATCCATTAAAGCAAGCCAAGACGACCTTTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GACAAGCAGGTAGCAGAGCTGGAAGTAGAATCAAGGCTTTGCAATGCCCAGTTGTGTCTGTGCAGCTCCTaGAGCAGGTGGGTGATCAGG +
Preference number: 4 (lower is better)
Translates to: DKQVAELEVESRLCNAQLCLCSS*SRWVIR
Trigger: CCTGATCACCCACCTGCTGCAGGAGCTGCACAGACA...CAACTGGGCATTGCAAAGCCTTGATTCTACTTCCAGCTCTGCTACCTGCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp GCTGCAAAGGTCGTCTTGGCTTGCTTTAATGGATTTCCTGGGTTGCCTTTCTGCTCGTTGAGCATGTTCTaGGCCAGCTCGGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: AAKVVLACFNGFPGLPFCSLSMF*ASSESR
Trigger: CCTGCTCTCCGAGCTGGCGCAGAACATGCTCAACGA...GCAGAAAGGCAACCCAGGAAATCCATTAAAGCAAGCCAAGACGACCTTTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GGCCTCTACCCACCAGATGCCAGTAGCAGTGTCCCAGCTGTGACAACCAAAAATCGTGTACTCAGCCAGTaGCACGTCGTTGAGCATGTT +
Preference number: 4 (lower is better)
Translates to: GLYPPDASSSVPAVTTKNRVLSQ*HVVEHV
Trigger: AACATGCTCAACGACGTGGCACTGGCTGAGTACACG...ATTTTTGGTTGTCACAGCTGGGACACTGCTACTGGCATCTGGTGGGTAGAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GCTGCAAAGGTCGTCTTGGCTTGCTTTAATGGATTTCCTGGGTTGCCTTTCTGCTTCCACAGTGACCGCTaGCAGGCACGTTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: AAKVVLACFNGFPGLPFCFHSDR*QARSRI
Trigger: GATCCTGGAACGTGCCTGGCAGCGGTCACTGTGGAA...GCAGAAAGGCAACCCAGGAAATCCATTAAAGCAAGCCAAGACGACCTTTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GGGACTCCTGGAGACCAGATGTGGTGGCACCACGCTGCATCTCGCTGGCTCAGCAATGAGGGCTCTGATTaGTACCAATTTCTTAAAGCA +
Preference number: 4 (lower is better)
Translates to: GTPGDQMWWHHAASRWLSNEGSD*YQFLKA
Trigger: TGCTTTAAGAAATTGGTAGCAATCAGAGCCCTCATT...GCTGAGCCAGCGAGATGCAGCGTGGTGCCACCACATCTGGTCTCCAGGAGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp ATCATTACAAATCCTGAAAACCCAGAGGGAGGGTTGAGCCCGACCCACAACTGGGCTGGATGGGAACGATaGAGTGACTGCTTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: IITNPENPEGGLSPTHNWAGWER*SDCLQL
Trigger: CAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGC...CCAGTTGTGGGTCGGGCTCAACCCTCCCTCTGGGTTTTCAGGATTTGTAATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR GCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGTCACCAAACCAGTGCTaGAGGTCACTTCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: VPGARINIDLSLLLHATLSPNQC*RSLPAW
Trigger: CCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGA...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGATCGTTGGGTTACGCTaGAAAGGTCGTCTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMIVGLR*KGRLGL
Trigger: CAAGCCAAGACGACCTTTGCAGCGTAACCCAACGAT...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGGGTGTACAGTTATTGTaGATTTGGGATTCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLGVQLL*IWDSAG
Trigger: TCCCGCTGAATCCCAAATGCACAATAACTGTACACC...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR GCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGCATTACAAGGACACTTaGAAGTCGCTCCGGCAGACA +
Preference number: 4 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGHYKDT*KSLRQT
Trigger: TGTCTGCCGGAGCGACTTGCAAGTGTCCTTGTAATG...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp ATGGCTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCAGAGCGGCAAGGACATTaGCAGTGCAATACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: MADLVGSYEIRPGLSTSAERQGH*QCNTAG
Trigger: TCCTGCTGTATTGCACTGGCAATGTCCTTGCCGCTC...TGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp CAGAGGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTTCAGGAAAATATCCTaGCAGTGTGAGCCTCATGCT +
Preference number: 4 (lower is better)
Translates to: QREAEGGSPNQCCRSLPAFRKIS*QCEPHA
Trigger: AGCATGAGGCTCACACTGGCAGGATATTTTCCTGAA...AGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGTCCAGGCTTCCTCCTTaGAGAAGCAGAGCATTTCCA +
Preference number: 4 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMSRLPP*RSRAFP
Trigger: TGGAAATGCTCTGCTTCTGCAAGGAGGAAGCCTGGA...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGACCTGTTGTGTCCTTTaGTCACAGCCTGTGGATGAC +
Preference number: 4 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGTCCVL*SQPVDD
Trigger: GTCATCCACAGGCTGTGAGCAAAGGACACAACAGGT...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp GGCCTCTACCCACCAGATGCCAGTAGCAGTGTCCCAGCTGTGACAACCAAAAATCTATGTTTGCCCCTGTaGTGTCTTCCTTCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: GLYPPDASSSVPAVTTKNLCLPL*CLPSSQ
Trigger: CTGCGAGGAAGGAAGACAGCACAGGGGCAAACATAG...ATTTTTGGTTGTCACAGCTGGGACACTGCTACTGGCATCTGGTGGGTAGAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp TTGTTGCAGCCCATTGGTCTGCAGAGCGATCAAACCACACTACCTCAGCGTGTCGTCCTTATGGCAGAGTaGACTCCGAGACAACCGTCA +
Preference number: 4 (lower is better)
Translates to: LLQPIGLQSDQTTLPQRVVLMAE*TPRQPS
Trigger: TGACGGTTGTCTCGGAGTGCACTCTGCCATAAGGAC...GACACGCTGAGGTAGTGTGGTTTGATCGCTCTGCAGACCAATGGGCTGCAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp CTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCACTGGTTTGCAATGCCCAGTTaGAGGCCCTTCCTGCATTTC +
Preference number: 4 (lower is better)
Translates to: LILLGAMRSVLDSRPQHWFAMPS*RPFLHF
Trigger: GAAATGCAGGAAGGGCCTGCAACTGGGCATTGCAAA...CCAGTGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp GCTGCAAAGGTCGTCTTGGCTTGCTTTAATGGATTTCCTGGGTTGCCTTTCTGCGTGCTCCATTGGCCTTaGCCAGGGACCCTGGAAATG +
Preference number: 4 (lower is better)
Translates to: AAKVVLACFNGFPGLPFCVLHWP*PGTLEM
Trigger: CATTTCCAGGGTCCCTGGGCAAGGCCAATGGAGCAC...GCAGAAAGGCAACCCAGGAAATCCATTAAAGCAAGCCAAGACGACCTTTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp TTGTTGCAGCCCATTGGTCTGCAGAGCGATCAAACCACACTACCTCAGCGTGTCGGGGAAACGTTGCTATaGCAACTAGCTGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LLQPIGLQSDQTTLPQRVGETLL*QLAGCC
Trigger: GCAACAGCCAGCTAGTTGGCATAGCAACGTTTCCCC...GACACGCTGAGGTAGTGTGGTTTGATCGCTCTGCAGACCAATGGGCTGCAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp GCTGCAAAGGTCGTCTTGGCTTGCTTTAATGGATTTCCTGGGTTGCCTTTCTGCAGGGTGGACAGCTGCTaGAAACAAGCCTCCACGTCC +
Preference number: 4 (lower is better)
Translates to: AAKVVLACFNGFPGLPFCRVDSC*KQASTS
Trigger: GGACGTGGAGGCTTGTTTCCAGCAGCTGTCCACCCT...GCAGAAAGGCAACCCAGGAAATCCATTAAAGCAAGCCAAGACGACCTTTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp ACTTCTTCCCCAGCAGCATCCAGCCAGACACTCGCACAGCAGTCACTAAATGCAGCGCACACTCTTTCATaGAACCTCTCTTGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: TSSPAASSQTLAQQSLNAAHTLS*NLSWSP
Trigger: CGGAGACCAAGAGAGGTTCCATGAAAGAGTGTGCGC...TGCATTTAGTGACTGCTGTGCGAGTGTCTGGCTGGATGCTGCTGGGGAAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp TACCAAAGTGAACCTACTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGCATCTGTATCCCGCTCGAGCCTaGATATTTTTGTCACCTCTC +
Preference number: 4 (lower is better)
Translates to: YQSEPTGLPEQVLPLEHLYPARA*IFLSPL
Trigger: GAGAGGTGACAAAAATATCCAGGCTCGAGCGGGATA...CAGATGCTCCAGGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCACTTTGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324058.9
CDS-3UTR CCA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGTATCCCGCTCGAGCCTaGATATTTTTGTCACCTCTC +
Preference number: 4 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQYPARA*IFLSPL
Trigger: GAGAGGTGACAAAAATATCCAGGCTCGAGCGGGATA...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCACTGGGTGGCTTTCTGGAGTTaGCCCAGATTCCCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: LILLGAMRSVLDSRPQHWVAFWS*PRFPFS
Trigger: ACTGAAAGGGAATCTGGGCCAACTCCAGAAAGCCAC...CCAGTGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GGCCTCTACCCACCAGATGCCAGTAGCAGTGTCCCAGCTGTGACAACCAAAAATTCAGACGTGGCTTTCTaGAGTTGGCCCAGATTCCCT +
Preference number: 4 (lower is better)
Translates to: GLYPPDASSSVPAVTTKNSDVAF*SWPRFP
Trigger: AGGGAATCTGGGCCAACTCCAGAAAGCCACGTCTGA...ATTTTTGGTTGTCACAGCTGGGACACTGCTACTGGCATCTGGTGGGTAGAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp ACTTCTTCCCCAGCAGCATCCAGCCAGACACTCGCACAGCAGTCACTAAATGCACAGCTGTCCTGTGAGTaGAGTCACCTGCACCTCTTT +
Preference number: 4 (lower is better)
Translates to: TSSPAASSQTLAQQSLNAQLSCE*SHLHLF
Trigger: AAAGAGGTGCAGGTGACTCCACTCACAGGACAGCTG...TGCATTTAGTGACTGCTGTGCGAGTGTCTGGCTGGATGCTGCTGGGGAAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CCAATCTTATTTGCAAATCTGATGAAATCCATGCTCCTTCTCCCTAGGAAAGAGGCCTGGAGCTCCTCCTaGAGGCGGGTGGCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: PILFANLMKSMLLLPRKEAWSSS*RRVASS
Trigger: GGACGAGGCCACCCGCCTCCAGGAGGAGCTCCAGGC...CTCTTTCCTAGGGAGAAGGAGCATGGATTTCATCAGATTTGCAAATAAGATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp GACAAGCAGGTAGCAGAGCTGGAAGTAGAATCAAGGCTTTGCAATGCCCAGTTGTTGACGTCCAGGTGGTaGCTTGTCTCTGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: DKQVAELEVESRLCNAQLLTSRW*LVSGTP
Trigger: GGGAGTCCCAGAGACAAGCCACCACCTGGACGTCAA...CAACTGGGCATTGCAAAGCCTTGATTCTACTTCCAGCTCTGCTACCTGCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp CAGGAATCCAGTGAACATCTCCACGGACTGATGGTTTCACTGCAGGCAGGCCCCATGGAGTCTATGAAATaGCTCCGGAGAATGAGTGGC +
Preference number: 4 (lower is better)
Translates to: QESSEHLHGLMVSLQAGPMESMK*LRRMSG
Trigger: GCCACTCATTCTCCGGAGCCATTTCATAGACTCCAT...GGGGCCTGCCTGCAGTGAAACCATCAGTCCGTGGAGATGTTCACTGGATTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGGAGCATGAAGTCACAAGACGACGGACGTCTGAGCTCCTGGGACTCCTGGAGTTGCCTGGCATCCAGTaGATATCAACAGACGTTTTT +
Preference number: 4 (lower is better)
Translates to: GEHEVTRRRTSELLGLLELPGIQ*ISTDVF
Trigger: AAAAACGTCTGTTGATATCCACTGGATGCCAGGCAA...CTCCAGGAGTCCCAGGAGCTCAGACGTCCGTCGTCTTGTGACTTCATGCTCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCACTGGGTGACTGCTTGCAGCTaGCTTGACAAGAGCATGCTT +
Preference number: 4 (lower is better)
Translates to: LILLGAMRSVLDSRPQHWVTACS*LDKSML
Trigger: AAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC...CCAGTGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp ATGGCTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCAAGTCTCTGTTCTCGGTaGAAGGAAGGGGTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: MADLVGSYEIRPGLSTSASLCSR*KEGVLD
Trigger: ATCCAGCACCCCTTCCTTCCACCGAGAACAGAGACT...TGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GACAAGCAGGTAGCAGAGCTGGAAGTAGAATCAAGGCTTTGCAATGCCCAGTTGGGAGCATCTGATGGGTaGCAAGGAGCCACCATGTGC +
Preference number: 4 (lower is better)
Translates to: DKQVAELEVESRLCNAQLGASDG*QGATMC
Trigger: GCACATGGTGGCTCCTTGCCACCCATCAGATGCTCC...CAACTGGGCATTGCAAAGCCTTGATTCTACTTCCAGCTCTGCTACCTGCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp GCTGCAAAGGTCGTCTTGGCTTGCTTTAATGGATTTCCTGGGTTGCCTTTCTGCACGCAGGCCCAAGTGTaGCCTGGTTGGTGGTCATGT +
Preference number: 4 (lower is better)
Translates to: AAKVVLACFNGFPGLPFCTQAQV*PGWWSC
Trigger: ACATGACCACCAACCAGGCCACACTTGGGCCTGCGT...GCAGAAAGGCAACCCAGGAAATCCATTAAAGCAAGCCAAGACGACCTTTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GGCCTCTACCCACCAGATGCCAGTAGCAGTGTCCCAGCTGTGACAACCAAAAATCAGAGGCTGAGCCAGTaGGTGCTTTGGGGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: GLYPPDASSSVPAVTTKNQRLSQ*VLWGFD
Trigger: ATCAAAACCCCAAAGCACCCACTGGCTCAGCCTCTG...ATTTTTGGTTGTCACAGCTGGGACACTGCTACTGGCATCTGGTGGGTAGAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp ACAAAACAATTCTCCATGGCTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGAGCGAGGTCCTCCACCTaGCCCTGCAGGCCAATCTCT +
Preference number: 4 (lower is better)
Translates to: TKQFSMADLVGSYEIRPGARSST*PCRPIS
Trigger: AGAGATTGGCCTGCAGGGCCAGGTGGAGGACCTCGC...TCCAGGACGGATCTCATAGCTCCCAACAAGATCAGCCATGGAGAATTGTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GCTGCAAAGGTCGTCTTGGCTTGCTTTAATGGATTTCCTGGGTTGCCTTTCTGCTCTGAGGGAACCTCCTaGAGCAGCAGTGGTCGCCAA +
Preference number: 4 (lower is better)
Translates to: AAKVVLACFNGFPGLPFCSEGTS*SSSGRQ
Trigger: TTGGCGACCACTGCTGCTCCAGGAGGTTCCCTCAGA...GCAGAAAGGCAACCCAGGAAATCCATTAAAGCAAGCCAAGACGACCTTTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGGAGACTAGGGGTGCTTaGCTACTAGGGTGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: VPGARINIDLSLLLHATLETRGA*LLGCLS
Trigger: AGACAAGCACCCTAGTAGCCAAGCACCCCTAGTCTC...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp ATCATTACAAATCCTGAAAACCCAGAGGGAGGGTTGAGCCCGACCCACAACTGGAGGAAGCAGACTCCCTaGGTCCAAGCACAGCAACTG +
Preference number: 4 (lower is better)
Translates to: IITNPENPEGGLSPTHNWRKQTP*VQAQQL
Trigger: CAGTTGCTGTGCTTGGACCCAGGGAGTCTGCTTCCT...CCAGTTGTGGGTCGGGCTCAACCCTCCCTCTGGGTTTTCAGGATTTGTAATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGGACAGGTATATTCTCTaGTACTGCCAGAGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQDRYIL*YCQRSG
Trigger: CCCACTTCTCTGGCAGTACCAGAGAATATACCTGTC...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp CTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCACTGGTTGATTTCAGTGGCCTaGAGAGAGGCTTGGGCATCA +
Preference number: 4 (lower is better)
Translates to: LILLGAMRSVLDSRPQHWLISVA*REAWAS
Trigger: TGATGCCCAAGCCTCTCTCCAGGCCACTGAAATCAA...CCAGTGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp CAGAGGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTAATGCAGTTTGCCATTaGTGCACATGCCGAAGACAA +
Preference number: 4 (lower is better)
Translates to: QREAEGGSPNQCCRSLPANAVCH*CTCRRQ
Trigger: TTGTCTTCGGCATGTGCACCAATGGCAAACTGCATT...AGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
3UTR CAA 72 bp CAGGGTTTAGGGCTCCGCCTCCAGGGAAGTCCGCCATaGTTGTTTGCTGACAGTCCGTGTGACAAATTGTTT +
Preference number: 4 (lower is better)
Translates to: QGLGLRLQGSPP*LFADSPCDKLF
Trigger: AAACAATTTGTCACACGGACTGTCAGCAAACAACAATGGCGGACTTCCCTGGAGGCGGAGCCCTAAACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp CAGGAATCCAGTGAACATCTCCACGGACTGATGGTTTCACTGCAGGCAGGCCCCAGTTCTTTCTTTAACTaGGAGATGTCCCCTACCAGC +
Preference number: 4 (lower is better)
Translates to: QESSEHLHGLMVSLQAGPSSFFN*EMSPTS
Trigger: GCTGGTAGGGGACATCTCTCAGTTAAAGAAAGAACT...GGGGCCTGCCTGCAGTGAAACCATCAGTCCGTGGAGATGTTCACTGGATTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR TCA 90 bp GGCCTCTACCCACCAGATGCCAGTAGCAGTGTCCCAGCTGTGACAACCAAAAATTCCAGTTTTCCAGGGTaGCTTGCTCCATCGTGTCTT +
Preference number: 4 (lower is better)
Translates to: GLYPPDASSSVPAVTTKNSSFPG*LAPSCL
Trigger: AAGACACGATGGAGCAAGTCACCCTGGAAAACTGGA...ATTTTTGGTTGTCACAGCTGGGACACTGCTACTGGCATCTGGTGGGTAGAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp GACAAGCAGGTAGCAGAGCTGGAAGTAGAATCAAGGCTTTGCAATGCCCAGTTGAAAGCAGCTGTCCTGTaGGTGGAGTCACCTGCACCT +
Preference number: 4 (lower is better)
Translates to: DKQVAELEVESRLCNAQLKAAVL*VESPAP
Trigger: AGGTGCAGGTGACTCCACTCACAGGACAGCTGCTTT...CAACTGGGCATTGCAAAGCCTTGATTCTACTTCCAGCTCTGCTACCTGCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp GTGACTGCTTGCAGCTGGCTTGACAAGAGCATGCTTTGCCCACTTCCCCTCCAGTTTCCTATGCTGCCTTaGCATTGCCAAAGCCAAACT +
Preference number: 4 (lower is better)
Translates to: VTACSWLDKSMLCPLPLQFPMLP*HCQSQT
Trigger: AGTTTGGCTTTGGCAATGTCAAGGCAGCATAGGAAA...CTGGAGGGGAAGTGGGCAAAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp TTGTTGCAGCCCATTGGTCTGCAGAGCGATCAAACCACACTACCTCAGCGTGTCTGGAACTCAATGTGCTaGGGCTGCCTTTCTTACGTC +
Preference number: 4 (lower is better)
Translates to: LLQPIGLQSDQTTLPQRVWNSMC*GCLSYV
Trigger: GACGTAAGAAAGGCAGCCTCAGCACATTGAGTTCCA...GACACGCTGAGGTAGTGTGGTTTGATCGCTCTGCAGACCAATGGGCTGCAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp ATGGCTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCATGGTCAGGAATCCAGTaGACATCTCCACGGACTGAT +
Preference number: 4 (lower is better)
Translates to: MADLVGSYEIRPGLSTSAWSGIQ*TSPRTD
Trigger: ATCAGTCCGTGGAGATGTTCACTGGATTCCTGACCA...TGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR TCA 90 bp CGTGCTGATTTACTCACAGGAGTATCTCTCCCATTGTCCTGTGAGGTCCCCGGCGCAGTCTCTGGACTTTaGGTAGCTTGTTTCGCTGTT +
Preference number: 4 (lower is better)
Translates to: RADLLTGVSLPLSCEVPGAVSGL*VACFAV
Trigger: AACAGCGAAACAAGCTACTCAAAGTCCAGAGACTGC...GCCGGGGACCTCACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp GGCCTCTACCCACCAGATGCCAGTAGCAGTGTCCCAGCTGTGACAACCAAAAATATTCAGAGGTTTTGCTaGCCAGGACTTGAACTGGGG +
Preference number: 4 (lower is better)
Translates to: GLYPPDASSSVPAVTTKNIQRFC*PGLELG
Trigger: CCCCAGTTCAAGTCCTGGTCAGCAAAACCTCTGAAT...ATTTTTGGTTGTCACAGCTGGGACACTGCTACTGGCATCTGGTGGGTAGAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp GCTGCAAAGGTCGTCTTGGCTTGCTTTAATGGATTTCCTGGGTTGCCTTTCTGCTCTGAAGCCCCATTCTaGTCCTGCACGTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: AAKVVLACFNGFPGLPFCSEAPF*SCTSSA
Trigger: TGCAGAGGACGTGCAGGATCAGAATGGGGCTTCAGA...GCAGAAAGGCAACCCAGGAAATCCATTAAAGCAAGCCAAGACGACCTTTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR TCA 90 bp GACAAGCAGGTAGCAGAGCTGGAAGTAGAATCAAGGCTTTGCAATGCCCAGTTGTGCCAAGTTCCTGCCTaGACCTACTGGGTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: DKQVAELEVESRLCNAQLCQVPA*TYWVAR
Trigger: TCTGGCAACCCAGTAGGTTCAGGCAGGAACTTGGCA...CAACTGGGCATTGCAAAGCCTTGATTCTACTTCCAGCTCTGCTACCTGCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp CTGGAGCATCTGATGGGTGGCAAGGAGCCACCATGTGCCCTTCCAAATGCTGGGAGAATGGTAAATCAATaGGTCCTTATGGCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: LEHLMGGKEPPCALPNAGRMVNQ*VLMAEC
Trigger: GCACTCTGCCATAAGGACTCATTGATTTACCATTCT...CCCAGCATTTGGAAGGGCACATGGTGGCTCCTTGCCACCCATCAGATGCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp CTAGACCCAGACGGCAATTCATGGCCCGGGAGAATAAGTGGCTCTGCCTTGGAACTCATGGACACAAGTTaGGAGAAGAAGAGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: LDPDGNSWPGRISGSALELMDTS*EKKSSS
Trigger: CGAAGAGCTCTTCTTCTCTCAACTTGTGTCCATGAG...TTCCAAGGCAGAGCCACTTATTCTCCCGGGCCATGAATTGCCGTCTGGGTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp TTCCTGCCTGAACCTACTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGCATCTGTGCACTCTGTGCCACTaGAATGGATACTTAAAAATG +
Preference number: 4 (lower is better)
Translates to: FLPEPTGLPEQVLPLEHLCTLCH*NGYLKM
Trigger: CATTTTTAAGTATCCATTTCAGTGGCACAGAGTGCA...CAGATGCTCCAGGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCAGGCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTGACTTCCAGTCAGGGAAATGAGGAGTaGATCTTTCATGAATATGGT +
Preference number: 4 (lower is better)
Translates to: PTSPTGHCPAIPLWLTSSQGNEE*IFHEYG
Trigger: ACCATATTCATGAAAGATTCACTCCTCATTTCCCTG...ACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp CACCATGTGCCCTTCCAAATGCTGGGGTCTACAGACCAGGCGAGGGGAGTCCGCGGAATTAGACTCTATTaGATGTCTACTATGTGCAGA +
Preference number: 4 (lower is better)
Translates to: HHVPFQMLGSTDQARGVRGIRLY*MSTMCR
Trigger: TCTGCACATAGTAGACATTCAATAGAGTCTAATTCC...GCGGACTCCCCTCGCCTGGTCTGTAGACCCCAGCATTTGGAAGGGCACATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp ACGCTAGGTTGCCTGACATGGCCTGTGCTTTTAGTAACACCCCTTCCCATCCCAACACTAGATGAAGTCTaGGGCTGTCTCCAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: TLGCLTWPVLLVTPLPIPTLDEV*GCLQLQ
Trigger: TTGGAGCTGGAGACAGCCTCAGACTTCATCTAGTGT...TGGGATGGGAAGGGGTGTTACTAAAAGCACAGGCCATGTCAGGCAACCTAGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTGACTTCCAGTCAATTCAAAAACCTTTaGCCAGCTTTGGTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: PTSPTGHCPAIPLWLTSSQFKNL*PALVLD
Trigger: ATCAAGCACCAAAGCTGGTCAAAGGTTTTTGAATTG...ACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp CAGGAATCCAGTGAACATCTCCACGGACTGATGGTTTCACTGCAGGCAGGCCCCTTTTCCAGGGTGACTTaGTCCATCGTGTCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: QESSEHLHGLMVSLQAGPFSRVT*SIVSLD
Trigger: ATCCAAAGACACGATGGAGCAAGTCACCCTGGAAAA...GGGGCCTGCCTGCAGTGAAACCATCAGTCCGTGGAGATGTTCACTGGATTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR GCA 90 bp GCTGCAAAGGTCGTCTTGGCTTGCTTTAATGGATTTCCTGGGTTGCCTTTCTGCGCTTTTCCCTGGAGGTaGTCCCTTCCCCTCACCAAA +
Preference number: 4 (lower is better)
Translates to: AAKVVLACFNGFPGLPFCAFPWR*SLPLTK
Trigger: TTTGGTGAGGGGAAGGGAGCACCTCCAGGGAAAAGC...GCAGAAAGGCAACCCAGGAAATCCATTAAAGCAAGCCAAGACGACCTTTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGCTCTTTCTCCAAATGTaGTTCTTTCACTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLLFLQM*FFHFCS
Trigger: GGAGCAGAAGTGAAAGAAGCACATTTGGAGAAAGAG...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp ACTTCTTCCCCAGCAGCATCCAGCCAGACACTCGCACAGCAGTCACTAAATGCAATTCCGCCTTTTTCTTaGAGACGTTGTGCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: TSSPAASSQTLAQQSLNAIPPFS*RRCAGR
Trigger: TCTCCCCGCACAACGTCTGCAAGAAAAAGGCGGAAT...TGCATTTAGTGACTGCTGTGCGAGTGTCTGGCTGGATGCTGCTGGGGAAGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR GCA 90 bp ACAAAACAATTCTCCATGGCTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGAGTGAACCTACTGGGTTaGCAGAGCAGGTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: TKQFSMADLVGSYEIRPGVNLLG*QSRSCP
Trigger: GGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCAC...TCCAGGACGGATCTCATAGCTCCCAACAAGATCAGCCATGGAGAATTGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324058.9
CDS-3UTR GCA 90 bp ACAAAACAATTCTCCATGGCTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACCACCCTTTCCCTCCTaGTCAGGGATTCGGGACCCT +
Preference number: 4 (lower is better)
Translates to: TKQFSMADLVGSYEIRPGPPFPS*SGIRDP
Trigger: AGGGTCCCGAATCCCTGAGCAGGAGGGAAAGGGTGG...TCCAGGACGGATCTCATAGCTCCCAACAAGATCAGCCATGGAGAATTGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR GCA 90 bp CAGGAATCCAGTGAACATCTCCACGGACTGATGGTTTCACTGCAGGCAGGCCCCCTCATCGATTGTGAGTaGACACCTGTTGTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: QESSEHLHGLMVSLQAGPLIDCE*TPVVSF
Trigger: AAAGGACACAACAGGTGTGCACTCACAATCGATGAG...GGGGCCTGCCTGCAGTGAAACCATCAGTCCGTGGAGATGTTCACTGGATTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp ACGCTAGGTTGCCTGACATGGCCTGTGCTTTTAGTAACACCCCTTCCCATCCCACAAATTGTTTTCTGCTaGAGAGCCAGGCTGGACCGT +
Preference number: 4 (lower is better)
Translates to: TLGCLTWPVLLVTPLPIPQIVFC*RARLDR
Trigger: ACGGTCCAGCCTGGCTCTGCAGCAGAAAACAATTTG...TGGGATGGGAAGGGGTGTTACTAAAAGCACAGGCCATGTCAGGCAACCTAGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp TTCCTGCCTGAACCTACTGGGTTGCCAGAGCAGGTCCTGCCCCTGGAGCATCTGAAATATTTTCCAGCTTaGTATGTTTGCCCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: FLPEPTGLPEQVLPLEHLKYFPA*YVCPCA
Trigger: AGCACAGGGGCAAACATAGCAAGCTGGAAAATATTT...CAGATGCTCCAGGGGCAGGACCTGCTCTGGCAACCCAGTAGGTTCAGGCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp ACTTCTTCCCCAGCAGCATCCAGCCAGACACTCGCACAGCAGTCACTAAATGCAATCATAGGCCACCTCTaGTCTGTCGGTCAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: TSSPAASSQTLAQQSLNAIIGHL*SVGQLR
Trigger: TCTCAACTGACCGACAGAGCAGAGGTGGCCTATGAT...TGCATTTAGTGACTGCTGTGCGAGTGTCTGGCTGGATGCTGCTGGGGAAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp GGTTTAGGGCTCCGCCTCCAGGGAAGTCCGCCATTGTTGTTTGCTGACAGTCCGGCTTGGCTACTAGGGTaGTTGTCTACCAATCTTATT +
Preference number: 4 (lower is better)
Translates to: GLGLRLQGSPPLLFADSPAWLLG*LSTNLI
Trigger: AATAAGATTGGTAGACAAGCACCCTAGTAGCCAAGC...CGGACTGTCAGCAAACAACAATGGCGGACTTCCCTGGAGGCGGAGCCCTAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp TCCTGTGTGCAGTGGGATGGACTGTTCACCCCAGGAGTGCTCCATTGGCCTTGCGCATTCAATGGTCAATaGACAACATCTCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SCVQWDGLFTPGVLHWPCAFNGQ*TTSPLS
Trigger: AGACAGAGGAGATGTTGTGCATTGACCATTGAATGC...GCAAGGCCAATGGAGCACTCCTGGGGTGAACAGTCCATCCCACTGCACACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp AAGGGATCACCGCAGTGGTTTCCAATCTGGGGATTCTTGAGGGGTGGTAACGGGTCCTGGGTTGTGTACTaGAGGAAGAGGATTTGGAAC +
Preference number: 4 (lower is better)
Translates to: KGSPQWFPIWGFLRGGNGSWVVY*RKRIWN
Trigger: GTTCCAAATCCTCTTCCTGCAGTACACAACCCAGGA...CCCGTTACCACCCCTCAAGAATCCCCAGATTGGAAACCACTGCGGTGATCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp TCCTGTGTGCAGTGGGATGGACTGTTCACCCCAGGAGTGCTCCATTGGCCTTGCTTTGACCAGCTTTGGTaGTTGATTTCACACCGAGAA +
Preference number: 4 (lower is better)
Translates to: SCVQWDGLFTPGVLHWPCFDQLW*LISHRE
Trigger: TTCTCGGTGTGAAATCAAGCACCAAAGCTGGTCAAA...GCAAGGCCAATGGAGCACTCCTGGGGTGAACAGTCCATCCCACTGCACACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp TCCTGTGTGCAGTGGGATGGACTGTTCACCCCAGGAGTGCTCCATTGGCCTTGCTTCTGGAGTTTAGGATaGAAACAACTGCACCCAAGA +
Preference number: 4 (lower is better)
Translates to: SCVQWDGLFTPGVLHWPCFWSLG*KQLHPR
Trigger: TCTTGGGTGCAGTTGTTTGCATCCTAAACTCCAGAA...GCAAGGCCAATGGAGCACTCCTGGGGTGAACAGTCCATCCCACTGCACACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR GCA 90 bp ACTTCTTCCCCAGCAGCATCCAGCCAGACACTCGCACAGCAGTCACTAAATGCAGGTAGGAATGCAGTTTaGCATTGGTGCACATGCCGA +
Preference number: 4 (lower is better)
Translates to: TSSPAASSQTLAQQSLNAGRNAV*HWCTCR
Trigger: TCGGCATGTGCACCAATGGCAAACTGCATTCCTACC...TGCATTTAGTGACTGCTGTGCGAGTGTCTGGCTGGATGCTGCTGGGGAAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGTTCCTTGCAGGGCATTaGCTACACCAGTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: VPGARINIDLSLLLHATLFLAGH*LHQCFS
Trigger: GGAGAAACACTGGTGTAGCCAATGCCCTGCAAGGAA...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GGCAGAGTGCACTCCGAGACAACCGTCAGTGAAATACCTAAGTCGAAGGAACTGGAAGTTCTTCAAGCTTaGCCTGGAGCTCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GRVHSETTVSEIPKSKELEVLQA*PGAPPG
Trigger: TCCAGGAGGAGCTCCAGGCCAAGCTTGAAGAACTTC...CAGTTCCTTCGACTTAGGTATTTCACTGACGGTTGTCTCGGAGTGCACTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGGAAGACAATGAGCTTTaGAGGACACTGTCCATTTCA +
Preference number: 4 (lower is better)
Translates to: LDLSTGDPRAVILCCRRLEDNEL*RTLSIS
Trigger: TGAAATGGACAGTGTCCTCCAAAGCTCATTGTCTTC...CAGCCTCCTACAGCAAAGAATTACAGCCCGAGGGTCGCCAGTGCTGAGGTCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp ATCATTACAAATCCTGAAAACCCAGAGGGAGGGTTGAGCCCGACCCACAACTGGTTCAGAGAATCCAGTTaGGCTGTCTGTGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: IITNPENPEGGLSPTHNWFRESS*AVCAGH
Trigger: GTGGCCAGCACAGACAGCCCAACTGGATTCTCTGAA...CCAGTTGTGGGTCGGGCTCAACCCTCCCTCTGGGTTTTCAGGATTTGTAATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp GACAAGCAGGTAGCAGAGCTGGAAGTAGAATCAAGGCTTTGCAATGCCCAGTTGGAGCTCAGAGGGTGCTaGGACGTTATCGACTTGGAG +
Preference number: 4 (lower is better)
Translates to: DKQVAELEVESRLCNAQLELRGC*DVIDLE
Trigger: CTCCAAGTCGATAACGTCCCAGCACCCTCTGAGCTC...CAACTGGGCATTGCAAAGCCTTGATTCTACTTCCAGCTCTGCTACCTGCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp CGTGCTGATTTACTCACAGGAGTATCTCTCCCATTGTCCTGTGAGGTCCCCGGCATGGAGTCTATGAAATaGCTCCGGAGAATGAGTGGC +
Preference number: 4 (lower is better)
Translates to: RADLLTGVSLPLSCEVPGMESMK*LRRMSG
Trigger: GCCACTCATTCTCCGGAGCCATTTCATAGACTCCAT...GCCGGGGACCTCACAGGACAATGGGAGAGATACTCCTGTGAGTAAATCAGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGAAATGTCTCCAGACATaGCCAGATTTTCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: VPGARINIDLSLLLHATLKCLQT*PDFPWG
Trigger: CCCCCAGGGAAAATCTGGCCATGTCTGGAGACATTT...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCACTGGTCATGCCACATTGCCTaGCATCCAGTGGATATCAAC +
Preference number: 4 (lower is better)
Translates to: LILLGAMRSVLDSRPQHWSCHIA*HPVDIN
Trigger: GTTGATATCCACTGGATGCCAGGCAATGTGGCATGA...CCAGTGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GTGCTGGATGGGAACGATGCAGTGACTGCTTGCAGCTGGCTTGACAAGAGCATGTCATGCCACATTGCCTaGCATCCAGTGGATATCAAC +
Preference number: 4 (lower is better)
Translates to: VLDGNDAVTACSWLDKSMSCHIA*HPVDIN
Trigger: GTTGATATCCACTGGATGCCAGGCAATGTGGCATGA...CATGCTCTTGTCAAGCCAGCTGCAAGCAGTCACTGCATCGTTCCCATCCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGGTGACTGCTTGCAGCTaGCTTGACAAGAGCATGCTT +
Preference number: 4 (lower is better)
Translates to: VPGARINIDLSLLLHATLVTACS*LDKSML
Trigger: AAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp GGCCTCTACCCACCAGATGCCAGTAGCAGTGTCCCAGCTGTGACAACCAAAAATGTGACTGCTTGCAGCTaGCTTGACAAGAGCATGCTT +
Preference number: 4 (lower is better)
Translates to: GLYPPDASSSVPAVTTKNVTACS*LDKSML
Trigger: AAGCATGCTCTTGTCAAGCCAGCTGCAAGCAGTCAC...ATTTTTGGTTGTCACAGCTGGGACACTGCTACTGGCATCTGGTGGGTAGAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp AATGGAGCGATCATTACAAATCCTGAAAACCCAGAGGGAGGGTTGAGCCCGACCCCTAGACTCTCTTTTTaGGGGGCTGCCCTCAGGATA +
Preference number: 4 (lower is better)
Translates to: NGAIITNPENPEGGLSPTPRLSF*GAALRI
Trigger: TATCCTGAGGGCAGCCCCCCAAAAAGAGAGTCTAGG...GGTCGGGCTCAACCCTCCCTCTGGGTTTTCAGGATTTGTAATGATCGCTCCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp GGGAGGCAGAAGGCGGATCACCAAACCAGTGCTGCAGGTCACTTCCTGCTTGGATTTCTTACGTCTCAATaGCTCCCCAATTTTCCTCGA +
Preference number: 4 (lower is better)
Translates to: GRQKADHQTSAAGHFLLGFLTSQ*LPNFPR
Trigger: TCGAGGAAAATTGGGGAGCCATTGAGACGTAAGAAA...TCCAAGCAGGAAGTGACCTGCAGCACTGGTTTGGTGATCCGCCTTCTGCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CTGGAGCATCTGATGGGTGGCAAGGAGCCACCATGTGCCCTTCCAAATGCTGGGCTGCAAAGGTCGTCTTaGCTTGCTTTAATGGATTTC +
Preference number: 4 (lower is better)
Translates to: LEHLMGGKEPPCALPNAGLQRSS*LALMDF
Trigger: GAAATCCATTAAAGCAAGCCAAGACGACCTTTGCAG...CCCAGCATTTGGAAGGGCACATGGTGGCTCCTTGCCACCCATCAGATGCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp AATGGAGCGATCATTACAAATCCTGAAAACCCAGAGGGAGGGTTGAGCCCGACCGCCCGGGAGAATAAGTaGCTCTGCCTTGGAAACATG +
Preference number: 4 (lower is better)
Translates to: NGAIITNPENPEGGLSPTARENK*LCLGNM
Trigger: CATGTTTCCAAGGCAGAGCCACTTATTCTCCCGGGC...GGTCGGGCTCAACCCTCCCTCTGGGTTTTCAGGATTTGTAATGATCGCTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324058.9
ENST00000639345.1
CDS-3UTR CCA 90 bp CCTCAGGATAGAAGTGCTCTTCTCCTGGGTCGCCCACCTGATTCGGGGCACGAGTCTGTTTGCAGTCTCTaGACTTTGAGTAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: PQDRSALLLGRPPDSGHESVCSL*TLSSLF
Trigger: AAACAAGCTACTCAAAGTCCAGAGACTGCAAACAGA...CTCGTGCCCCGAATCAGGTGGGCGACCCAGGAGAAGAGCACTTCTATCCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGTCAAAGTGCCAGAGCTaGGACATGGATGTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: VPGARINIDLSLLLHATLSKCQS*DMDVVP
Trigger: TGGAACCACATCCATGTCCCAGCTCTGGCACTTTGA...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp ATGGCTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCATTGCACTTAGTTTCCTaGCATTCAGGTCTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: MADLVGSYEIRPGLSTSALHLVS*HSGLCP
Trigger: GGGGCAGAGACCTGAATGCCAGGAAACTAAGTGCAA...TGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGCAAGTGTGGCCTGGTTaGTGGTCATGTCTGCTCTAT +
Preference number: 4 (lower is better)
Translates to: VPGARINIDLSLLLHATLQVWPG*WSCLLY
Trigger: ATAGAGCAGACATGACCACCAACCAGGCCACACTTG...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp TGTCCTCTCTCTGTCATGTTCCTGATGCTCAAAGCTAATGACATTGTCCCAAAAAGCCACGGTGGCCTGTaGGAGCCTGCGGGTCTAACC +
Preference number: 4 (lower is better)
Translates to: CPLSVMFLMLKANDIVPKSHGGL*EPAGLT
Trigger: GGTTAGACCCGCAGGCTCCCACAGGCCACCGTGGCT...TTTTGGGACAATGTCATTAGCTTTGAGCATCAGGAACATGACAGAGAGAGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp ACAAAACAATTCTCCATGGCTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGAAGGCACTGGTTTTGCTaGGCGAGGTCCTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: TKQFSMADLVGSYEIRPGRHWFC*ARSSTW
Trigger: CCAGGTGGAGGACCTCGCCCAGCAAAACCAGTGCCT...TCCAGGACGGATCTCATAGCTCCCAACAAGATCAGCCATGGAGAATTGTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531445.3
CDS-3UTR CCA 90 bp GGCAGAGTGCACTCCGAGACAACCGTCAGTGAAATACCTAAGTCGAAGGAACTGGAGCTGACTGTCTGTTaGCCATGGCTCTTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: GRVHSETTVSEIPKSKELELTVC*PWLFGL
Trigger: GAGACCAAAGAGCCATGGCCAACAGACAGTCAGCTC...CAGTTCCTTCGACTTAGGTATTTCACTGACGGTTGTCTCGGAGTGCACTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp CTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCACTGGAAATCTGGGAAACAGTaGCAAACCTGTCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LILLGAMRSVLDSRPQHWKSGKQ*QTCLSC
Trigger: GCAGGAGAGACAGGTTTGCCACTGTTTCCCAGATTT...CCAGTGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531445.3
ENST00000639345.1
CDS-3UTR CCA 90 bp CAGACGCTAGGTTGCCTGACATGGCCTGTGCTTTTAGTAACACCCCTTCCCATCTTTGCTCACAGCCTGTaGATGACCATGATCAGTGGG +
Preference number: 4 (lower is better)
Translates to: QTLGCLTWPVLLVTPLPIFAHSL*MTMISG
Trigger: CCCACTGATCATGGTCATCCACAGGCTGTGAGCAAA...GATGGGAAGGGGTGTTACTAAAAGCACAGGCCATGTCAGGCAACCTAGCGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp TGTCCTCTCTCTGTCATGTTCCTGATGCTCAAAGCTAATGACATTGTCCCAAAACCAGGCTGGACCGTCTaGCTGGTCTCCAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: CPLSVMFLMLKANDIVPKPGWTV*LVSRGL
Trigger: GAGGCCTCTGGAGACCAGCCAGACGGTCCAGCCTGG...TTTTGGGACAATGTCATTAGCTTTGAGCATCAGGAACATGACAGAGAGAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp CCCACCTCACCCACCGGACACTGCCCAGCCATTCCTTTGTGGCTGACTTCCAGTAGGAAGATGGTTGCTTaGCTTATAATTTGGCTCACT +
Preference number: 4 (lower is better)
Translates to: PTSPTGHCPAIPLWLTSSRKMVA*LIIWLT
Trigger: AGTGAGCCAAATTATAAGCCAAGCAACCATCTTCCT...ACTGGAAGTCAGCCACAAAGGAATGGCTGGGCAGTGTCCGGTGGGTGAGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp AGTCTGAGGCTGTCTCCAGCTCCAACAATGGATGTTTCCGGATCTGTCACCTTACACTTTGGGGTGCTGTaGTCAGTTGGGCGCAACTCA +
Preference number: 4 (lower is better)
Translates to: SLRLSPAPTMDVSGSVTLHFGVL*SVGRNS
Trigger: TGAGTTGCGCCCAACTGACCACAGCACCCCAAAGTG...TAAGGTGACAGATCCGGAAACATCCATTGTTGGAGCTGGAGACAGCCTCAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR CCA 90 bp GTCCCCGGCGCCAGGATCAACATTGACTTGTCTCTTCTCCTTCATGCCACATTGGTACTGCCAGAGAAGTaGGTGAGGTCCAGATATGCA +
Preference number: 4 (lower is better)
Translates to: VPGARINIDLSLLLHATLVLPEK*VRSRYA
Trigger: TGCATATCTGGACCTCACCCACTTCTCTGGCAGTAC...CAATGTGGCATGAAGGAGAAGAGACAAGTCAATGTTGATCCTGGCGCCGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639345.1
CDS-3UTR TCA 90 bp CTGATCTTGTTGGGAGCTATGAGATCCGTCCTGGACTCTCGACCTCAGCACTGGTCTTCAATCCAGAAATaGGCTGATGAAACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LILLGAMRSVLDSRPQHWSSIQK*ADETCS
Trigger: GGAGCAGGTTTCATCAGCTCATTTCTGGATTGAAGA...CCAGTGCTGAGGTCGAGAGTCCAGGACGGATCTCATAGCTCCCAACAAGATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp ACTTCTTCCCCAGCAGCATCCAGCCAGACACTCGCACAGCAGTCACTAAATGCATCAGCTCTTTATAACTaGCGCCAAGCTCCGAGATCA +
Preference number: 4 (lower is better)
Translates to: TSSPAASSQTLAQQSLNASALYN*RQAPRS
Trigger: TGATCTCGGAGCTTGGCGTCAGTTATAAAGAGCTGA...TGCATTTAGTGACTGCTGTGCGAGTGTCTGGCTGGATGCTGCTGGGGAAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324058.9
ENST00000531445.3
ENST00000639345.1
CDS-3UTR TCA 90 bp CTCGACCTCAGCACTGGCGACCCTCGGGCTGTAATTCTTTGCTGTAGGAGGCTGTCTGCCTTGGAAACATaGTTTATTAGGGAATCGTTG +
Preference number: 4 (lower is better)
Transla