Pregenerated sensors for C4ORF47 (Homo sapiens)
Ensembl gene IDs: ENSG00000205129Ensembl transcript IDs: ENST00000378850.5, ENST00000508698.3, ENST00000511138.5, ENST00000511581.5
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCAGAAATATTTGCCAATTTAGCCACATAAGGGTCAGCAGAATGTaGTGGGTAAGGATCAAATGTTCCTGCCTTCATTCCACCAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: ARNICQFSHIRVSRM*WVRIKCSCLHSTRL Trigger: AAGCCTGGTGGAATGAAGGCAGGAACATTTGATCCTTACCCATCACATTCTGCTGACCCTTATGTGGCTAAATTGGCAAATATTTCTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| 3UTR CCA 90 bp | GTCATTATACTTTCAACTGGTCTGCTTTTTGGTCCACTTGGTGGGTaGAAAATCTTATCATCTTTGCCAGAAATATTTGCCAATTTAGCC | + |
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Preference number: 1 (lower is better) Translates to: VIILSTGLLFGPLGG*KILSSLPEIFANLA Trigger: GGCTAAATTGGCAAATATTTCTGGCAAAGATGATAAGATTTTCCACCCACCAAGTGGACCAAAAAGCAGACCAGTTGAAAGTATAATGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| 3UTR CCA 90 bp | CCTTCTGACATTCAAAGTCATTATACTTTCAACTGGTCTGCTTTTTaGTCCACTTGGTGGGTGGAAAATCTTATCATCTTTGCCAGAAAT | + |
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Preference number: 1 (lower is better) Translates to: PSDIQSHYTFNWSAF*STWWVENLIIFARN Trigger: ATTTCTGGCAAAGATGATAAGATTTTCCACCCACCAAGTGGACCAAAAAGCAGACCAGTTGAAAGTATAATGACTTTGAATGTCAGAAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| 3UTR CCA 90 bp | ATTCAAAGTCATTATACTTTCAACTGGTCTGCTTTTTGGTCCACTTaGTGGGTGGAAAATCTTATCATCTTTGCCAGAAATATTTGCCAA | + |
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Preference number: 1 (lower is better) Translates to: IQSHYTFNWSAFWST*WVENLIIFARNICQ Trigger: TTGGCAAATATTTCTGGCAAAGATGATAAGATTTTCCACCCACCAAGTGGACCAAAAAGCAGACCAGTTGAAAGTATAATGACTTTGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| 3UTR-3UTR TCA 90 bp | GGTGGGTGGAAAATCTTATCATCTTTGCCAGAAATATTTGCCAATTTAGCCACAGTTTTGACTGTGCGCTaGAAAATGGGACTGGACCAC | + |
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Preference number: 2 (lower is better) Translates to: GGWKILSSLPEIFANLATVLTVR*KMGLDH Trigger: GTGGTCCAGTCCCATTTTTCAGCGCACAGTCAAAAC...TGTGGCTAAATTGGCAAATATTTCTGGCAAAGATGATAAGATTTTCCACCCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| 3UTR-3UTR CCA 90 bp | GTTCCTTTCTTTCCCGGGTTTGTGTATAAATTCTTTCCAGGTGCCTTGTATTTTCTGTGCGCTGAAAAATaGGACTGGACCACCTATTGT | + |
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Preference number: 2 (lower is better) Translates to: VPFFPGFVYKFFPGALYFLCAEK*DWTTYC Trigger: ACAATAGGTGGTCCAGTCCCATTTTTCAGCGCACAG...AAAATACAAGGCACCTGGAAAGAATTTATACACAAACCCGGGAAAGAAAGGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| 3UTR CAA 90 bp | TGCTCTTCATTCGCTTTCCATATCCAGTTCCTTTCTTTCCCGGGTTaGTGTATAAATTCTTTCCAGGTGCCTTGTATTTTTCTCGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: CSSFAFHIQFLSFPG*CINSFQVPCIFLEV Trigger: AACCTCGAGAAAAATACAAGGCACCTGGAAAGAATTTATACACAAACCCGGGAAAGAAAGGAACTGGATATGGAAAGCGAATGAAGAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| 3UTR-3UTR TCA 90 bp | TTTTGGTCCACTTGGTGGGTGGAAAATCTTATCATCTTTGCCAGAAATATTTGCAGGGTCAGCAGAATGTaGTGGGTAAGGATCAAATGT | + |
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Preference number: 2 (lower is better) Translates to: FWSTWWVENLIIFARNICRVSRM*WVRIKC Trigger: ACATTTGATCCTTACCCATCACATTCTGCTGACCCT...GCAAATATTTCTGGCAAAGATGATAAGATTTTCCACCCACCAAGTGGACCAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| 3UTR-3UTR CCA 90 bp | TCTTCATTCGCTTTCCATATCCAGTTCCTTTCTTTCCCGGGTTTGTGTATAAATGCTGAAAAATGGGACTaGACCACCTATTGTTCCATA | + |
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Preference number: 2 (lower is better) Translates to: SSFAFHIQFLSFPGLCINAEKWD*TTYCSI Trigger: TATGGAACAATAGGTGGTCCAGTCCCATTTTTCAGC...ATTTATACACAAACCCGGGAAAGAAAGGAACTGGATATGGAAAGCGAATGAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGTGGAAAATCTTATCATCTTTGCCAGAAATATTTGCCAATTTAGCCACACCTTTAAGTAAACGATaGTGCTCTTCATTCGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: GGWKILSSLPEIFANLATPLSKR*CSSFAF Trigger: GAAAGCGAATGAAGAGCACCATCGTTTACTTAAAGG...TGTGGCTAAATTGGCAAATATTTCTGGCAAAGATGATAAGATTTTCCACCCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| 3UTR CAA 90 bp | CATTCAAAGTCATTATACTTTCAACTGGTCTGCTTTTTGGTCCACTaGGTGGGTGGAAAATCTTATCATCTTTGCCAGAAATATTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: HSKSLYFQLVCFLVH*VGGKSYHLCQKYLP Trigger: TGGCAAATATTTCTGGCAAAGATGATAAGATTTTCCACCCACCAAGTGGACCAAAAAGCAGACCAGTTGAAAGTATAATGACTTTGAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| 3UTR TCA 72 bp | ATTTGCCAATTTAGCCACATAAGGGTCAGCAGAATGTaGTGGGTAAGGATCAAATGTTCCTGCCTTCATTCC | + |
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Preference number: 3 (lower is better) Translates to: ICQFSHIRVSRM*WVRIKCSCLHS Trigger: GGAATGAAGGCAGGAACATTTGATCCTTACCCATCACATTCTGCTGACCCTTATGTGGCTAAATTGGCAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| 3UTR-3UTR CAA 90 bp | TCTGACATTCAAAGTCATTATACTTTCAACTGGTCTGCTTTTTGGTCCACTTGGTTCTTTCCAGGTGCCTaGTATTTTTCTCGAGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: SDIQSHYTFNWSAFWSTWFFPGA*YFSRGF Trigger: AAAACCTCGAGAAAAATACAAGGCACCTGGAAAGAA...CCAAGTGGACCAAAAAGCAGACCAGTTGAAAGTATAATGACTTTGAATGTCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| 3UTR CCA 72 bp | CATTATACTTTCAACTGGTCTGCTTTTTGGTCCACTTaGTGGGTGGAAAATCTTATCATCTTTGCCAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: HYTFNWSAFWST*WVENLIIFARN Trigger: ATTTCTGGCAAAGATGATAAGATTTTCCACCCACCAAGTGGACCAAAAAGCAGACCAGTTGAAAGTATAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| 3UTR GCA 72 bp | TTTAACTTAAATGGTGCTCCTTTAAGTAAACGATGGTaGTCTTCATTCGCTTTCCATATCCAGTTCCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: FNLNGAPLSKRW*SSFAFHIQFLS Trigger: AGAAAGGAACTGGATATGGAAAGCGAATGAAGAGCACCATCGTTTACTTAAAGGAGCACCATTTAAGTTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| 3UTR CCA 72 bp | AGATTTAACTTAAATGGTGCTCCTTTAAGTAAACGATaGTGCTCTTCATTCGCTTTCCATATCCAGTTCCTT | + |
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Preference number: 3 (lower is better) Translates to: RFNLNGAPLSKR*CSSFAFHIQFL Trigger: AAGGAACTGGATATGGAAAGCGAATGAAGAGCACCATCGTTTACTTAAAGGAGCACCATTTAAGTTAAATCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| 3UTR CCA 72 bp | ATTCAAAGTCATTATACTTTCAACTGGTCTGCTTTTTaGTCCACTTGGTGGGTGGAAAATCTTATCATCTTT | + |
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Preference number: 3 (lower is better) Translates to: IQSHYTFNWSAF*STWWVENLIIF Trigger: AAAGATGATAAGATTTTCCACCCACCAAGTGGACCAAAAAGCAGACCAGTTGAAAGTATAATGACTTTGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS-3UTR CCA 90 bp | GGTCAGCAGAATGTGATGGGTAAGGATCAAATGTTCCTGCCTTCATTCCACCAGCTTCCGCAGGCATGGTaGCGTCTGGTGGTGGTACTC | + |
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Preference number: 4 (lower is better) Translates to: GQQNVMGKDQMFLPSFHQLPQAW*RLVVVL Trigger: GAGTACCACCACCAGACGCCACCATGCCTGCGGAAG...CTGGTGGAATGAAGGCAGGAACATTTGATCCTTACCCATCACATTCTGCTGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS-3UTR GCA 90 bp | CTGGTCTGCTTTTTGGTCCACTTGGTGGGTGGAAAATCTTATCATCTTTGCCAGCAGCCGAGATCAGGTTaGCCCAGCTCGTCCAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: LVCFLVHLVGGKSYHLCQQPRSG*PSSSRL Trigger: CAACCTGGACGAGCTGGGGCAACCTGATCTCGGCTG...CTGGCAAAGATGATAAGATTTTCCACCCACCAAGTGGACCAAAAAGCAGACCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS-3UTR GCA 90 bp | GGTCTGCTTTTTGGTCCACTTGGTGGGTGGAAAATCTTATCATCTTTGCCAGAACCAGCTCGTCCAGGTTaGCCCAGCTTGTCCACGTTA | + |
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Preference number: 4 (lower is better) Translates to: GLLFGPLGGWKILSSLPEPARPG*PSLSTL Trigger: TAACGTGGACAAGCTGGGGCAACCTGGACGAGCTGG...TTCTGGCAAAGATGATAAGATTTTCCACCCACCAAGTGGACCAAAAAGCAGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS-3UTR TCA 90 bp | AACTGGTCTGCTTTTTGGTCCACTTGGTGGGTGGAAAATCTTATCATCTTTGCCAGCAAAGTCCTTTCTTaGGGACACCCACTCCGACAG | + |
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Preference number: 4 (lower is better) Translates to: NWSAFWSTWWVENLIIFASKVLS*GHPLRQ Trigger: CTGTCGGAGTGGGTGTCCTCAAGAAAGGACTTTGCT...GGCAAAGATGATAAGATTTTCCACCCACCAAGTGGACCAAAAAGCAGACCAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS-3UTR CCA 90 bp | TTCTTTCCCGGGTTTGTGTATAAATTCTTTCCAGGTGCCTTGTATTTTTCTCGACTCCTTCCGCAGGCATaGTGGCGTCTGGTGGTGGTA | + |
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Preference number: 4 (lower is better) Translates to: FFPGFVYKFFPGALYFSRLLPQA*WRLVVV Trigger: TACCACCACCAGACGCCACCATGCCTGCGGAAGGAG...TCGAGAAAAATACAAGGCACCTGGAAAGAATTTATACACAAACCCGGGAAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS-3UTR CCA 90 bp | TTTGGTCCACTTGGTGGGTGGAAAATCTTATCATCTTTGCCAGAAATATTTGCCCATGGTGGCGTCTGGTaGTGGTACTCTCTATACCGC | + |
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Preference number: 4 (lower is better) Translates to: FGPLGGWKILSSLPEIFAHGGVW*WYSLYR Trigger: GCGGTATAGAGAGTACCACCACCAGACGCCACCATG...GGCAAATATTTCTGGCAAAGATGATAAGATTTTCCACCCACCAAGTGGACCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS-3UTR CCA 90 bp | GGTCAGCAGAATGTGATGGGTAAGGATCAAATGTTCCTGCCTTCATTCCACCAGGCTTTTTGGTCCACTTaGTGGGTGGAAAATCTTATC | + |
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Preference number: 4 (lower is better) Translates to: GQQNVMGKDQMFLPSFHQAFWST*WVENLI Trigger: GATAAGATTTTCCACCCACCAAGTGGACCAAAAAGC...CTGGTGGAATGAAGGCAGGAACATTTGATCCTTACCCATCACATTCTGCTGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS-3UTR CCA 90 bp | GTGCTCTTCATTCGCTTTCCATATCCAGTTCCTTTCTTTCCCGGGTTTGTGTATAACTGGTCTGCTTTTTaGTCCACTTGGTGGGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: VLFIRFPYPVPFFPGFVYNWSAF*STWWVE Trigger: TTCCACCCACCAAGTGGACCAAAAAGCAGACCAGTT...ATACACAAACCCGGGAAAGAAAGGAACTGGATATGGAAAGCGAATGAAGAGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS-3UTR GCA 90 bp | AACTGGTCTGCTTTTTGGTCCACTTGGTGGGTGGAAAATCTTATCATCTTTGCCAGGATCAAATGTTCCTaGCTTCATTCCACCAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: NWSAFWSTWWVENLIIFARIKCS*LHSTRL Trigger: AAGCCTGGTGGAATGAAGGCAGGAACATTTGATCCT...GGCAAAGATGATAAGATTTTCCACCCACCAAGTGGACCAAAAAGCAGACCAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS-3UTR CCA 90 bp | TTAAGTAAACGATGGTGCTCTTCATTCGCTTTCCATATCCAGTTCCTTTCTTTCAGGCATGGTGGCGTCTaGTGGTGGTACTCTCTATAC | + |
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Preference number: 4 (lower is better) Translates to: LSKRWCSSFAFHIQFLSFRHGGV*WWYSLY Trigger: GTATAGAGAGTACCACCACCAGACGCCACCATGCCT...GAAAGAAAGGAACTGGATATGGAAAGCGAATGAAGAGCACCATCGTTTACTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS-3UTR TCA 90 bp | TCTGACATTCAAAGTCATTATACTTTCAACTGGTCTGCTTTTTGGTCCACTTGGGTTTTGACTGTGCGCTaGAAAATGGGACTGGACCAC | + |
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Preference number: 4 (lower is better) Translates to: SDIQSHYTFNWSAFWSTWVLTVR*KMGLDH Trigger: GTGGTCCAGTCCCATTTTTCAGCGCACAGTCAAAAC...CCAAGTGGACCAAAAAGCAGACCAGTTGAAAGTATAATGACTTTGAATGTCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS-3UTR TCA 90 bp | GGTCAGCAGAATGTGATGGGTAAGGATCAAATGTTCCTGCCTTCATTCCACCAGCTAATAGGATGGTACTaGAGAAGTCTTGTAGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: GQQNVMGKDQMFLPSFHQLIGWY*RSLVVL Trigger: AAGAACTACAAGACTTCTTCAGTACCATCCTATTAG...CTGGTGGAATGAAGGCAGGAACATTTGATCCTTACCCATCACATTCTGCTGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS-3UTR GCA 90 bp | GGTCAGCAGAATGTGATGGGTAAGGATCAAATGTTCCTGCCTTCATTCCACCAGTTAAGTAAACGATGGTaGTCTTCATTCGCTTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: GQQNVMGKDQMFLPSFHQLSKRW*SSFAFH Trigger: ATGGAAAGCGAATGAAGAGCACCATCGTTTACTTAA...CTGGTGGAATGAAGGCAGGAACATTTGATCCTTACCCATCACATTCTGCTGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS-3UTR CCA 90 bp | GTGCTCTTCATTCGCTTTCCATATCCAGTTCCTTTCTTTCCCGGGTTTGTGTATGGTCCACTTGGTGGGTaGAAAATCTTATCATCTTTG | + |
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Preference number: 4 (lower is better) Translates to: VLFIRFPYPVPFFPGFVYGPLGG*KILSSL Trigger: CAAAGATGATAAGATTTTCCACCCACCAAGTGGACC...ATACACAAACCCGGGAAAGAAAGGAACTGGATATGGAAAGCGAATGAAGAGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS-3UTR CCA 90 bp | TTAAGTAAACGATGGTGCTCTTCATTCGCTTTCCATATCCAGTTCCTTTCTTTCCTGTGCGCTGAAAAATaGGACTGGACCACCTATTGT | + |
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Preference number: 4 (lower is better) Translates to: LSKRWCSSFAFHIQFLSFLCAEK*DWTTYC Trigger: ACAATAGGTGGTCCAGTCCCATTTTTCAGCGCACAG...GAAAGAAAGGAACTGGATATGGAAAGCGAATGAAGAGCACCATCGTTTACTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS-3UTR TCA 90 bp | TCTTCATTCGCTTTCCATATCCAGTTCCTTTCTTTCCCGGGTTTGTGTATAAATAGGGTCAGCAGAATGTaGTGGGTAAGGATCAAATGT | + |
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Preference number: 4 (lower is better) Translates to: SSFAFHIQFLSFPGLCINRVSRM*WVRIKC Trigger: ACATTTGATCCTTACCCATCACATTCTGCTGACCCT...ATTTATACACAAACCCGGGAAAGAAAGGAACTGGATATGGAAAGCGAATGAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS-3UTR CCA 90 bp | TTTGGTCCACTTGGTGGGTGGAAAATCTTATCATCTTTGCCAGAAATATTTGCCTTTTGGTCCACTTGGTaGGTGGAAAATCTTATCATC | + |
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Preference number: 4 (lower is better) Translates to: FGPLGGWKILSSLPEIFAFWSTW*VENLII Trigger: GATGATAAGATTTTCCACCCACCAAGTGGACCAAAA...GGCAAATATTTCTGGCAAAGATGATAAGATTTTCCACCCACCAAGTGGACCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| 3UTR CAA 72 bp | TTCGCTTTCCATATCCAGTTCCTTTCTTTCCCGGGTTaGTGTATAAATTCTTTCCAGGTGCCTTGTATTTTT | + |
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Preference number: 4 (lower is better) Translates to: FAFHIQFLSFPG*CINSFQVPCIF Trigger: AAAAATACAAGGCACCTGGAAAGAATTTATACACAAACCCGGGAAAGAAAGGAACTGGATATGGAAAGCGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| 3UTR CAA 72 bp | TCATTATACTTTCAACTGGTCTGCTTTTTGGTCCACTaGGTGGGTGGAAAATCTTATCATCTTTGCCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: SLYFQLVCFLVH*VGGKSYHLCQK Trigger: TTTCTGGCAAAGATGATAAGATTTTCCACCCACCAAGTGGACCAAAAAGCAGACCAGTTGAAAGTATAATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS-3UTR CCA 90 bp | TCTTCATTCGCTTTCCATATCCAGTTCCTTTCTTTCCCGGGTTTGTGTATAAATCATTATACTTTCAACTaGTCTGCTTTTTGGTCCACT | + |
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Preference number: 4 (lower is better) Translates to: SSFAFHIQFLSFPGLCINHYTFN*SAFWST Trigger: AGTGGACCAAAAAGCAGACCAGTTGAAAGTATAATG...ATTTATACACAAACCCGGGAAAGAAAGGAACTGGATATGGAAAGCGAATGAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| 3UTR CAA 72 bp | CATTCAAAGTCATTATACTTTCAACTGGTCTGCTTTTaGGTCCACTTGGTGGGTGGAAAATCTTATCATCTT | + |
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Preference number: 4 (lower is better) Translates to: HSKSLYFQLVCF*VHLVGGKSYHL Trigger: AAGATGATAAGATTTTCCACCCACCAAGTGGACCAAAAAGCAGACCAGTTGAAAGTATAATGACTTTGAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS-3UTR GCA 90 bp | TCTGACATTCAAAGTCATTATACTTTCAACTGGTCTGCTTTTTGGTCCACTTGGTTTGCCAGAAATATTTaGCAATTTAGCCACATAAGG | + |
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Preference number: 4 (lower is better) Translates to: SDIQSHYTFNWSAFWSTWFARNI*QFSHIR Trigger: CCTTATGTGGCTAAATTGGCAAATATTTCTGGCAAA...CCAAGTGGACCAAAAAGCAGACCAGTTGAAAGTATAATGACTTTGAATGTCAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS GCA 90 bp | GGTTGCCCCAGCTCGTCCAGGTTGCCCCAGCTTGTCCACGTTAACTaGGCTGCGGGAGCGGCGAGGGTTCCCAAGCGCGCGACACGCCTG | + |
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Preference number: 5 (lower is better) Translates to: GCPSSSRLPQLVHVN*AAGAARVPKRATRL Trigger: CAGGCGTGTCGCGCGCTTGGGAACCCTCGCCGCTCCCGCAGCGCAGTTAACGTGGACAAGCTGGGGCAACCTGGACGAGCTGGGGCAACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000378850.5 ENST00000511138.5 ENST00000511581.5 |
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| CDS GCA 90 bp | ACCCACTCCGACAGCCGAGATCAGGTTGCCCCAGCTCGTCCAGGTTaGCCCAGCTTGTCCACGTTAACTGCGCTGCGGGAGCGGCGAGGG | + |
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Preference number: 5 (lower is better) Translates to: THSDSRDQVAPARPG*PSLSTLTALRERRG Trigger: CCCTCGCCGCTCCCGCAGCGCAGTTAACGTGGACAAGCTGGGGCAACCTGGACGAGCTGGGGCAACCTGATCTCGGCTGTCGGAGTGGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000378850.5 ENST00000511138.5 ENST00000511581.5 |
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| CDS TCA 90 bp | TTTATAGCAAAGTCCTGGCGTCCGCGAGGACCAAGTCACCTTTCTTaGGGACACCCACTCCGACAGCCGAGATCAGGTTGCCCCAGCTCG | + |
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Preference number: 5 (lower is better) Translates to: FIAKSWRPRGPSHLS*GHPLRQPRSGCPSS Trigger: CGAGCTGGGGCAACCTGATCTCGGCTGTCGGAGTGGGTGTCCTCAAGAAAGGTGACTTGGTCCTCGCGGACGCCAGGACTTTGCTATAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511581.5 |
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| CDS CCA 90 bp | GGCCAATCCTTTCCATGTCCGTTTTTCCTCCTTCCGCAGGCATGGTaGCGTCTGGTGGTGGTACTCTCTATACCGCTAACTTCAAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: GQSFPCPFFLLPQAW*RLVVVLSIPLTSKV Trigger: AACTTTTGAAGTTAGCGGTATAGAGAGTACCACCACCAGACGCCACCATGCCTGCGGAAGGAGGAAAAACGGACATGGAAAGGATTGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000378850.5 ENST00000508698.3 ENST00000511138.5 ENST00000511581.5 |
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| CDS CCA 90 bp | AGAGGCCAATCCTTTCCATGTCCGTTTTTCCTCCTTCCGCAGGCATaGTGGCGTCTGGTGGTGGTACTCTCTATACCGCTAACTTCAAAA | + |
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Preference number: 5 (lower is better) Translates to: RGQSFPCPFFLLPQA*WRLVVVLSIPLTSK Trigger: TTTTGAAGTTAGCGGTATAGAGAGTACCACCACCAGACGCCACCATGCCTGCGGAAGGAGGAAAAACGGACATGGAAAGGATTGGCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000378850.5 ENST00000508698.3 ENST00000511138.5 ENST00000511581.5 |
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| CDS-3UTR CAA 90 bp | GGTCTGCTTTTTGGTCCACTTGGTGGGTGGAAAATCTTATCATCTTTGCCAGAAACAGCCGAGATCAGGTaGCCCCAGCTCGTCCAGGTT | + |
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Preference number: 5 (lower is better) Translates to: GLLFGPLGGWKILSSLPETAEIR*PQLVQV Trigger: AACCTGGACGAGCTGGGGCAACCTGATCTCGGCTGT...TTCTGGCAAAGATGATAAGATTTTCCACCCACCAAGTGGACCAAAAAGCAGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS-3UTR CAA 90 bp | TTTGGTCCACTTGGTGGGTGGAAAATCTTATCATCTTTGCCAGAAATATTTGCCCCCAGCTCGTCCAGGTaGCCCCAGCTTGTCCACGTT | + |
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Preference number: 5 (lower is better) Translates to: FGPLGGWKILSSLPEIFAPSSSR*PQLVHV Trigger: AACGTGGACAAGCTGGGGCAACCTGGACGAGCTGGG...GGCAAATATTTCTGGCAAAGATGATAAGATTTTCCACCCACCAAGTGGACCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS-3UTR CAA 90 bp | GGTGGGTGGAAAATCTTATCATCTTTGCCAGAAATATTTGCCAATTTAGCCACACCAGGTTGCCCCAGCTaGTCCACGTTAACTGCGCTG | + |
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Preference number: 5 (lower is better) Translates to: GGWKILSSLPEIFANLATPGCPS*STLTAL Trigger: CAGCGCAGTTAACGTGGACAAGCTGGGGCAACCTGG...TGTGGCTAAATTGGCAAATATTTCTGGCAAAGATGATAAGATTTTCCACCCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS-3UTR CAA 90 bp | AACTGGTCTGCTTTTTGGTCCACTTGGTGGGTGGAAAATCTTATCATCTTTGCCCAACTGGTCTGCTTTTaGGTCCACTTGGTGGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: NWSAFWSTWWVENLIIFAQLVCF*VHLVGG Trigger: TCCACCCACCAAGTGGACCAAAAAGCAGACCAGTTG...GGCAAAGATGATAAGATTTTCCACCCACCAAGTGGACCAAAAAGCAGACCAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS-3UTR CAA 90 bp | GGTCAGCAGAATGTGATGGGTAAGGATCAAATGTTCCTGCCTTCATTCCACCAGTGCTTTTTGGTCCACTaGGTGGGTGGAAAATCTTAT | + |
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Preference number: 5 (lower is better) Translates to: GQQNVMGKDQMFLPSFHQCFLVH*VGGKSY Trigger: ATAAGATTTTCCACCCACCAAGTGGACCAAAAAGCA...CTGGTGGAATGAAGGCAGGAACATTTGATCCTTACCCATCACATTCTGCTGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS-3UTR CAA 90 bp | TCTTCATTCGCTTTCCATATCCAGTTCCTTTCTTTCCCGGGTTTGTGTATAAATTTCTTTCCAGGTGCCTaGTATTTTTCTCGAGGTTTT | + |
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Preference number: 5 (lower is better) Translates to: SSFAFHIQFLSFPGLCINFFPGA*YFSRGF Trigger: AAAACCTCGAGAAAAATACAAGGCACCTGGAAAGAA...ATTTATACACAAACCCGGGAAAGAAAGGAACTGGATATGGAAAGCGAATGAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508698.3 |
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| CDS GCA 72 bp | AGCTCGTCCAGGTTGCCCCAGCTTGTCCACGTTAACTaGGCTGCGGGAGCGGCGAGGGTTCCCAAGCGCGCG | + |
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Preference number: 6 (lower is better) Translates to: SSSRLPQLVHVN*AAGAARVPKRA Trigger: CGCGCGCTTGGGAACCCTCGCCGCTCCCGCAGCGCAGTTAACGTGGACAAGCTGGGGCAACCTGGACGAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000378850.5 ENST00000511138.5 ENST00000511581.5 |
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| CDS CAA 90 bp | CACCCACTCCGACAGCCGAGATCAGGTTGCCCCAGCTCGTCCAGGTaGCCCCAGCTTGTCCACGTTAACTGCGCTGCGGGAGCGGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: HPLRQPRSGCPSSSR*PQLVHVNCAAGAAR Trigger: CCTCGCCGCTCCCGCAGCGCAGTTAACGTGGACAAGCTGGGGCAACCTGGACGAGCTGGGGCAACCTGATCTCGGCTGTCGGAGTGGGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000378850.5 ENST00000511138.5 ENST00000511581.5 |
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| CDS CAA 72 bp | GATCAGGTTGCCCCAGCTCGTCCAGGTTGCCCCAGCTaGTCCACGTTAACTGCGCTGCGGGAGCGGCGAGGG | + |
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Preference number: 6 (lower is better) Translates to: DQVAPARPGCPS*STLTALRERRG Trigger: CCCTCGCCGCTCCCGCAGCGCAGTTAACGTGGACAAGCTGGGGCAACCTGGACGAGCTGGGGCAACCTGATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000378850.5 ENST00000511138.5 ENST00000511581.5 |
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| CDS CAA 90 bp | GACAGCCGAGATCAGGTTGCCCCAGCTCGTCCAGGTTGCCCCAGCTaGTCCACGTTAACTGCGCTGCGGGAGCGGCGAGGGTTCCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: DSRDQVAPARPGCPS*STLTALRERRGFPS Trigger: GCTTGGGAACCCTCGCCGCTCCCGCAGCGCAGTTAACGTGGACAAGCTGGGGCAACCTGGACGAGCTGGGGCAACCTGATCTCGGCTGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000378850.5 ENST00000511138.5 ENST00000511581.5 |
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| CDS GCA 72 bp | GACAGCCGAGATCAGGTTGCCCCAGCTCGTCCAGGTTaGCCCAGCTTGTCCACGTTAACTGCGCTGCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: DSRDQVAPARPG*PSLSTLTALRE Trigger: CTCCCGCAGCGCAGTTAACGTGGACAAGCTGGGGCAACCTGGACGAGCTGGGGCAACCTGATCTCGGCTGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000378850.5 ENST00000508698.3 ENST00000511138.5 ENST00000511581.5 |
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| CDS CAA 72 bp | CGACAGCCGAGATCAGGTTGCCCCAGCTCGTCCAGGTaGCCCCAGCTTGTCCACGTTAACTGCGCTGCGGGA | + |
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Preference number: 6 (lower is better) Translates to: RQPRSGCPSSSR*PQLVHVNCAAG Trigger: TCCCGCAGCGCAGTTAACGTGGACAAGCTGGGGCAACCTGGACGAGCTGGGGCAACCTGATCTCGGCTGTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000378850.5 ENST00000508698.3 ENST00000511138.5 ENST00000511581.5 |
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| CDS CAA 72 bp | TTCTTGAGGACACCCACTCCGACAGCCGAGATCAGGTaGCCCCAGCTCGTCCAGGTTGCCCCAGCTTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: FLRTPTPTAEIR*PQLVQVAPACP Trigger: TGGACAAGCTGGGGCAACCTGGACGAGCTGGGGCAACCTGATCTCGGCTGTCGGAGTGGGTGTCCTCAAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000378850.5 ENST00000508698.3 ENST00000511138.5 ENST00000511581.5 |
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| CDS TCA 72 bp | AAGTCCTGGCGTCCGCGAGGACCAAGTCACCTTTCTTaGGGACACCCACTCCGACAGCCGAGATCAGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: KSWRPRGPSHLS*GHPLRQPRSGC Trigger: GCAACCTGATCTCGGCTGTCGGAGTGGGTGTCCTCAAGAAAGGTGACTTGGTCCTCGCGGACGCCAGGACTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511581.5 |
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| CDS CAA 72 bp | AAAGTCCTGGCGTCCGCGAGGACCAAGTCACCTTTCTaGAGGACACCCACTCCGACAGCCGAGATCAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: KVLASARTKSPF*RTPTPTAEIRL Trigger: CAACCTGATCTCGGCTGTCGGAGTGGGTGTCCTCAAGAAAGGTGACTTGGTCCTCGCGGACGCCAGGACTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511581.5 |
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| CDS CAA 90 bp | TTTTATAGCAAAGTCCTGGCGTCCGCGAGGACCAAGTCACCTTTCTaGAGGACACCCACTCCGACAGCCGAGATCAGGTTGCCCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: FYSKVLASARTKSPF*RTPTPTAEIRLPQL Trigger: GAGCTGGGGCAACCTGATCTCGGCTGTCGGAGTGGGTGTCCTCAAGAAAGGTGACTTGGTCCTCGCGGACGCCAGGACTTTGCTATAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511581.5 |
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| CDS CCA 72 bp | TCCTTTCCATGTCCGTTTTTCCTCCTTCCGCAGGCATaGTGGCGTCTGGTGGTGGTACTCTCTATACCGCTA | + |
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Preference number: 6 (lower is better) Translates to: SFPCPFFLLPQA*WRLVVVLSIPL Trigger: TAGCGGTATAGAGAGTACCACCACCAGACGCCACCATGCCTGCGGAAGGAGGAAAAACGGACATGGAAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000378850.5 ENST00000508698.3 ENST00000511138.5 ENST00000511581.5 |
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| CDS CCA 72 bp | TTTCCATGTCCGTTTTTCCTCCTTCCGCAGGCATGGTaGCGTCTGGTGGTGGTACTCTCTATACCGCTAACT | + |
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Preference number: 6 (lower is better) Translates to: FPCPFFLLPQAW*RLVVVLSIPLT Trigger: AGTTAGCGGTATAGAGAGTACCACCACCAGACGCCACCATGCCTGCGGAAGGAGGAAAAACGGACATGGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000378850.5 ENST00000508698.3 ENST00000511138.5 ENST00000511581.5 |
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| CDS CCA 72 bp | GATCAAAATAACCTGCCTGAAGATCTGACATTTCTTTaGACCCTCCAGGTAGCATCTGTTTATTTTTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: DQNNLPEDLTFL*TLQVASVYFCL Trigger: CAAGCAAAAATAAACAGATGCTACCTGGAGGGTCCAAAGAAATGTCAGATCTTCAGGCAGGTTATTTTGATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000378850.5 ENST00000511138.5 ENST00000511581.5 |
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| CDS CAA 90 bp | AGATCTGACATTTCTTTGGACCCTCCAGGTAGCATCTGTTTATTTTaGCTTGCAGCCTCATTAAAGGGTCGATTAAATTGTGACACATAT | + |
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Preference number: 6 (lower is better) Translates to: RSDISLDPPGSICLF*LAASLKGRLNCDTY Trigger: ATATGTGTCACAATTTAATCGACCCTTTAATGAGGCTGCAAGCAAAAATAAACAGATGCTACCTGGAGGGTCCAAAGAAATGTCAGATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000378850.5 ENST00000511138.5 ENST00000511581.5 |
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| CDS CAA 72 bp | TTGCATAGCCATATCCAGTTCCTTTCTTTCCCGGGTTaGTGTATAAATTCTTTCCAGGTGCCTTGTATTTTT | + |
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Preference number: 6 (lower is better) Translates to: LHSHIQFLSFPG*CINSFQVPCIF Trigger: AAAAATACAAGGCACCTGGAAAGAATTTATACACAAACCCGGGAAAGAAAGGAACTGGATATGGCTATGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000378850.5 ENST00000511138.5 ENST00000511581.5 |
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