RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C4ORF36 (Homo sapiens)

Ensembl gene IDs: ENSG00000163633

Ensembl transcript IDs: ENST00000295898.8, ENST00000462714.6, ENST00000504008.1, ENST00000504371.1, ENST00000506308.5, ENST00000512468.5

Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACAAGGAACAAGAGTATGTCAGGGACTCAGAAGATCTGTCAGAACTaGGTACTAACCCACAGCTGTGGGCAGTGGCCCATCCACCAGTGG +
Preference number: 1 (lower is better)
Translates to: TRNKSMSGTQKICQN*VLTHSCGQWPIHQW
Trigger: CCACTGGTGGATGGGCCACTGCCCACAGCTGTGGGTTAGTACCCAGTTCTGACAGATCTTCTGAGTCCCTGACATACTCTTGTTCCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
3UTR GCA 90 bp ACAGCTGTGGGCAGTGGCCCATCCACCAGTGGGCATTCAAATATCTaGCCTGAACTATACATAGTGAAAGGTCCAGAGACCTTCATGCCC +
Preference number: 1 (lower is better)
Translates to: TAVGSGPSTSGHSNI*PELYIVKGPETFMP
Trigger: GGGCATGAAGGTCTCTGGACCTTTCACTATGTATAGTTCAGGGCAGATATTTGAATGCCCACTGGTGGATGGGCCACTGCCCACAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
3UTR TCA 90 bp ATGCCCTTTGGATGCAAGACACAGAGTACAGATTCAATCATGAACTaGCTGTCATTTAGATGGAAGAGGTCTTCTCAAACCGGCTGGCCT +
Preference number: 1 (lower is better)
Translates to: MPFGCKTQSTDSIMN*LSFRWKRSSQTGWP
Trigger: AGGCCAGCCGGTTTGAGAAGACCTCTTCCATCTAAATGACAGTCAGTTCATGATTGAATCTGTACTCTGTGTCTTGCATCCAAAGGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
3UTR TCA 90 bp CCTTCATGCCCTTTGGATGCAAGACACAGAGTACAGATTCAATCATaGACTGACTGTCATTTAGATGGAAGAGGTCTTCTCAAACCGGCT +
Preference number: 1 (lower is better)
Translates to: PSCPLDARHRVQIQS*TDCHLDGRGLLKPA
Trigger: AGCCGGTTTGAGAAGACCTCTTCCATCTAAATGACAGTCAGTTCATGATTGAATCTGTACTCTGTGTCTTGCATCCAAAGGGCATGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
3UTR TCA 90 bp CTCAACTCCAAATGCATTTTCATCTACTTACAGTGCTGTCGTTTGTaGCACAAGGAACAAGAGTATGTCAGGGACTCAGAAGATCTGTCA +
Preference number: 1 (lower is better)
Translates to: LNSKCIFIYLQCCRL*HKEQEYVRDSEDLS
Trigger: TGACAGATCTTCTGAGTCCCTGACATACTCTTGTTCCTTGTGTCACAAACGACAGCACTGTAAGTAGATGAAAATGCATTTGGAGTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462714.6
3UTR-3UTR TCA 90 bp AAGACGCTTCACTTCATACTCCCTTTCGAGTTTGATAGATTCTGCAGAAGGGAGCCAAGAAAGGCAACTTaGTATTGGCTAGGTTTGTGG +
Preference number: 2 (lower is better)
Translates to: KTLHFILPFEFDRFCRREPRKAT*YWLGLW
Trigger: CCACAAACCTAGCCAATATCAAGTTGCCTTTCTTGG...CTCCCTTCTGCAGAATCTATCAAACTCGAAAGGGAGTATGAAGTGAAGCGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
3UTR-3UTR GCA 90 bp TTCATGTCCTTTGTAGGGACATGGGTGAAGCTGGAAACCATCATTCTCAGCAAAGAGTTTGATAGATTCTaGAGAAGGGAGCAGTCCATC +
Preference number: 2 (lower is better)
Translates to: FMSFVGTWVKLETIILSKEFDRF*RREQSI
Trigger: GATGGACTGCTCCCTTCTGCAGAATCTATCAAACTC...TTTGCTGAGAATGATGGTTTCCAGCTTCACCCATGTCCCTACAAAGGACATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
3UTR-3UTR CCA 90 bp TCGAGTTTGATAGATTCTGCAGAAGGGAGCAGTCCATCTTTAATGGTGGTACATTATTGGCTAGGTTTGTaGACCAGGTCTTTGCAAGCA +
Preference number: 2 (lower is better)
Translates to: SSLIDSAEGSSPSLMVVHYWLGL*TRSLQA
Trigger: TGCTTGCAAAGACCTGGTCCACAAACCTAGCCAATA...ATGTACCACCATTAAAGATGGACTGCTCCCTTCTGCAGAATCTATCAAACTCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
3UTR-3UTR GCA 90 bp TCAAATATCTGCCCTGAACTATACATAGTGAAAGGTCCAGAGACCTTCATGCCCGTACATTTTGTGAGCTaGACAGAACCACCAAATGAA +
Preference number: 2 (lower is better)
Translates to: SNICPELYIVKGPETFMPVHFVS*TEPPNE
Trigger: TTCATTTGGTGGTTCTGTGCAGCTCACAAAATGTAC...GGGCATGAAGGTCTCTGGACCTTTCACTATGTATAGTTCAGGGCAGATATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462714.6
3UTR-3UTR GCA 90 bp CATTTTCATCTACTTACAGTGCTGTCGTTTGTGACACAAGGAACAAGAGTATGTGGTCTTTGCAAGCAATaGAATATCCCAAGGTTCCTG +
Preference number: 2 (lower is better)
Translates to: HFHLLTVLSFVTQGTRVCGLCKQ*NIPRFL
Trigger: CAGGAACCTTGGGATATTGCATTGCTTGCAAAGACC...ACATACTCTTGTTCCTTGTGTCACAAACGACAGCACTGTAAGTAGATGAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462714.6
3UTR CCA 72 bp AAGAGTATGTCAGGGACTCAGAAGATCTGTCAGAACTaGGTACTAACCCACAGCTGTGGGCAGTGGCCCATC +
Preference number: 3 (lower is better)
Translates to: KSMSGTQKICQN*VLTHSCGQWPI
Trigger: GATGGGCCACTGCCCACAGCTGTGGGTTAGTACCCAGTTCTGACAGATCTTCTGAGTCCCTGACATACTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
3UTR GCA 72 bp GGCAGTGGCCCATCCACCAGTGGGCATTCAAATATCTaGCCTGAACTATACATAGTGAAAGGTCCAGAGACC +
Preference number: 3 (lower is better)
Translates to: GSGPSTSGHSNI*PELYIVKGPET
Trigger: GGTCTCTGGACCTTTCACTATGTATAGTTCAGGGCAGATATTTGAATGCCCACTGGTGGATGGGCCACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
3UTR CCA 72 bp CTGTCATTTAGATGGAAGAGGTCTTCTCAAACCGGCTaGCCTTTCCCTCAGGAGAAGCTGAATTTCCTTAGA +
Preference number: 3 (lower is better)
Translates to: LSFRWKRSSQTG*PFPQEKLNFLR
Trigger: TCTAAGGAAATTCAGCTTCTCCTGAGGGAAAGGCCAGCCGGTTTGAGAAGACCTCTTCCATCTAAATGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
3UTR-3UTR CAA 90 bp AAGACGCTTCACTTCATACTCCCTTTCGAGTTTGATAGATTCTGCAGAAGGGAGTTGTGGACCAGGTCTTaGCAAGCAATGCAATATCCC +
Preference number: 3 (lower is better)
Translates to: KTLHFILPFEFDRFCRRELWTRS*QAMQYP
Trigger: GGGATATTGCATTGCTTGCAAAGACCTGGTCCACAA...CTCCCTTCTGCAGAATCTATCAAACTCGAAAGGGAGTATGAAGTGAAGCGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
3UTR-3UTR CAA 90 bp CCTGAACTATACATAGTGAAAGGTCCAGAGACCTTCATGCCCTTTGGATGCAAGTCCAAGAAAGGCAACTaGATATTGGCTAGGTTTGTG +
Preference number: 3 (lower is better)
Translates to: PELYIVKGPETFMPFGCKSKKGN*ILARFV
Trigger: CACAAACCTAGCCAATATCAAGTTGCCTTTCTTGGA...CTTGCATCCAAAGGGCATGAAGGTCTCTGGACCTTTCACTATGTATAGTTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
3UTR-3UTR CAA 90 bp TTAATGGTGGTACATTTTGTGAGCTGCACAGAACCACCAAATGAAATTTCTTCCTTGTGGACCAGGTCTTaGCAAGCAATGCAATATCCC +
Preference number: 3 (lower is better)
Translates to: LMVVHFVSCTEPPNEISSLWTRS*QAMQYP
Trigger: GGGATATTGCATTGCTTGCAAAGACCTGGTCCACAA...GGAAGAAATTTCATTTGGTGGTTCTGTGCAGCTCACAAAATGTACCACCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
3UTR TCA 72 bp GGATGCAAGACACAGAGTACAGATTCAATCATGAACTaGCTGTCATTTAGATGGAAGAGGTCTTCTCAAACC +
Preference number: 3 (lower is better)
Translates to: GCKTQSTDSIMN*LSFRWKRSSQT
Trigger: GGTTTGAGAAGACCTCTTCCATCTAAATGACAGTCAGTTCATGATTGAATCTGTACTCTGTGTCTTGCATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
3UTR TCA 72 bp CCTTTGGATGCAAGACACAGAGTACAGATTCAATCATaGACTGACTGTCATTTAGATGGAAGAGGTCTTCTC +
Preference number: 3 (lower is better)
Translates to: PLDARHRVQIQS*TDCHLDGRGLL
Trigger: GAGAAGACCTCTTCCATCTAAATGACAGTCAGTTCATGATTGAATCTGTACTCTGTGTCTTGCATCCAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
3UTR CCA 72 bp ATACATAGTGAAAGGTCCAGAGACCTTCATGCCCTTTaGATGCAAGACACAGAGTACAGATTCAATCATGAA +
Preference number: 3 (lower is better)
Translates to: IHSERSRDLHAL*MQDTEYRFNHE
Trigger: TTCATGATTGAATCTGTACTCTGTGTCTTGCATCCAAAGGGCATGAAGGTCTCTGGACCTTTCACTATGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
3UTR-3UTR CAA 90 bp TTTGATAGATTCTGCAGAAGGGAGCAGTCCATCTTTAATGGTGGTACATTTTGTAAAGGCAACTTGATATaGGCTAGGTTTGTGGACCAG +
Preference number: 3 (lower is better)
Translates to: FDRFCRREQSIFNGGTFCKGNLI*ARFVDQ
Trigger: CTGGTCCACAAACCTAGCCAATATCAAGTTGCCTTT...ACAAAATGTACCACCATTAAAGATGGACTGCTCCCTTCTGCAGAATCTATCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
3UTR TCA 72 bp AACCACCAAATGAAATTTCTTCCAAGAAAGGCAACTTaGTATTGGCTAGGTTTGTGGACCAGGTCTTTGCAA +
Preference number: 3 (lower is better)
Translates to: NHQMKFLPRKAT*YWLGLWTRSLQ
Trigger: TTGCAAAGACCTGGTCCACAAACCTAGCCAATATCAAGTTGCCTTTCTTGGAAGAAATTTCATTTGGTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
CDS-3UTR TCA 90 bp CAGGTCTTTGCAAGCAATGCAATATCCCAAGGTTCCTGTCGGGCACAGTGGTGTTCGCGGCCGGGGTACTaGGGTAAGAGCGCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: QVFASNAISQGSCRAQWCSRPGY*GKSALR
Trigger: GCGCAGCGCGCTCTTACCTCAGTACCCCGGCCGCGA...ACACCACTGTGCCCGACAGGAACCTTGGGATATTGCATTGCTTGCAAAGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR TCA 90 bp AACAAACTGAGTTCCACTGAAATTAAGAGATTTTCTCGGTCTCTGGGCGGGCCGTCGCGGCCGGGGTACTaGGGTAAGAGCGCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: NKLSSTEIKRFSRSLGGPSRPGY*GKSALR
Trigger: GCGCAGCGCGCTCTTACCTCAGTACCCCGGCCGCGA...CGGCCCGCCCAGAGACCGAGAAAATCTCTTAATTTCAGTGGAACTCAGTTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295898.8
CDS-3UTR GCA 90 bp CTGTCATTTAGATGGAAGAGGTCTTCTCAAACCGGCTGGCCTTTCCCTCAGGAGGAGGTAAGAGCGCGCTaGGCTAAGCGCACATGGCCG +
Preference number: 4 (lower is better)
Translates to: LSFRWKRSSQTGWPFPQEEVRAR*AKRTWP
Trigger: CGGCCATGTGCGCTTAGCGCAGCGCGCTCTTACCTC...CTCCTGAGGGAAAGGCCAGCCGGTTTGAGAAGACCTCTTCCATCTAAATGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR CCA 90 bp AACAAACTGAGTTCCACTGAAATTAAGAGATTTTCTCGGTCTCTGGGCGGGCCGTGCGCTAAGCGCACATaGCCGCGCACACGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: NKLSSTEIKRFSRSLGGPCAKRT*PRTRLG
Trigger: CCCGAGGCGTGTGCGCGGCCATGTGCGCTTAGCGCA...CGGCCCGCCCAGAGACCGAGAAAATCTCTTAATTTCAGTGGAACTCAGTTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295898.8
CDS-3UTR GCA 90 bp AACAAACTGAGTTCCACTGAAATTAAGAGATTTTCTCGGTCTCTGGGCGGGCCGCAGGAATGCGCTGTGTaGGCGGGGCTTCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: NKLSSTEIKRFSRSLGGPQECAV*AGLPGW
Trigger: CCACCCTGGAAGCCCCGCGCACACAGCGCATTCCTG...CGGCCCGCCCAGAGACCGAGAAAATCTCTTAATTTCAGTGGAACTCAGTTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295898.8
CDS-3UTR GCA 90 bp AACAAACTGAGTTCCACTGAAATTAAGAGATTTTCTCGGTCTCTGGGCGGGCCGCCGACTCGCCAGGAATaGGCTGTGTGCGCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: NKLSSTEIKRFSRSLGGPPTRQE*AVCAGL
Trigger: AAGCCCCGCGCACACAGCGCATTCCTGGCGAGTCGG...CGGCCCGCCCAGAGACCGAGAAAATCTCTTAATTTCAGTGGAACTCAGTTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295898.8
CDS-3UTR GCA 90 bp AACAAACTGAGTTCCACTGAAATTAAGAGATTTTCTCGGTCTCTGGGCGGGCCGACCTGGGCCCCACCCTaGCTCCGACTCGCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: NKLSSTEIKRFSRSLGGPTWAPP*LRLARN
Trigger: ATTCCTGGCGAGTCGGAGGCAGGGTGGGGCCCAGGT...CGGCCCGCCCAGAGACCGAGAAAATCTCTTAATTTCAGTGGAACTCAGTTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295898.8
CDS-3UTR CCA 90 bp ACGCTTCACTTCATACTCCCTTTCGAGTTTGATAGATTCTGCAGAAGGGAGCAGTGCGCTAAGCGCACATaGCCGCGCACACGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: TLHFILPFEFDRFCRREQCAKRT*PRTRLG
Trigger: CCCGAGGCGTGTGCGCGGCCATGTGCGCTTAGCGCA...CTGCTCCCTTCTGCAGAATCTATCAAACTCGAAAGGGAGTATGAAGTGAAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR GCA 90 bp AACAAACTGAGTTCCACTGAAATTAAGAGATTTTCTCGGTCTCTGGGCGGGCCGGAGGTAAGAGCGCGCTaGGCTAAGCGCACATGGCCG +
Preference number: 4 (lower is better)
Translates to: NKLSSTEIKRFSRSLGGPEVRAR*AKRTWP
Trigger: CGGCCATGTGCGCTTAGCGCAGCGCGCTCTTACCTC...CGGCCCGCCCAGAGACCGAGAAAATCTCTTAATTTCAGTGGAACTCAGTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295898.8
CDS-3UTR GCA 90 bp AAGACGCTTCACTTCATACTCCCTTTCGAGTTTGATAGATTCTGCAGAAGGGAGCAGGAATGCGCTGTGTaGGCGGGGCTTCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: KTLHFILPFEFDRFCRREQECAV*AGLPGW
Trigger: CCACCCTGGAAGCCCCGCGCACACAGCGCATTCCTG...CTCCCTTCTGCAGAATCTATCAAACTCGAAAGGGAGTATGAAGTGAAGCGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512468.5
CDS-3UTR CCA 90 bp AACAAACTGAGTTCCACTGAAATTAAGAGATTTTCTCGGTCTCTGGGCGGGCCGGATTTTCTCGGTCTCTaGGCGGGCCGTGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: NKLSSTEIKRFSRSLGGPDFLGL*AGRGRL
Trigger: AAGCCTCCCACGGCCCGCCCAGAGACCGAGAAAATC...CGGCCCGCCCAGAGACCGAGAAAATCTCTTAATTTCAGTGGAACTCAGTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295898.8
CDS-3UTR CCA 90 bp TCCAAGAAAGGCAACTTGATATTGGCTAGGTTTGTGGACCAGGTCTTTGCAAGCCACAGCTGTGGGCAGTaGCCCATCCACCAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SKKGNLILARFVDQVFASHSCGQ*PIHQWA
Trigger: TGCCCACTGGTGGATGGGCCACTGCCCACAGCTGTG...GCTTGCAAAGACCTGGTCCACAAACCTAGCCAATATCAAGTTGCCTTTCTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR CCA 90 bp AACAAACTGAGTTCCACTGAAATTAAGAGATTTTCTCGGTCTCTGGGCGGGCCGTCTGTTCACTTTACCTaGGCCCCACCCTGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: NKLSSTEIKRFSRSLGGPSVHFT*APPCLR
Trigger: TCGGAGGCAGGGTGGGGCCCAGGTAAAGTGAACAGA...CGGCCCGCCCAGAGACCGAGAAAATCTCTTAATTTCAGTGGAACTCAGTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295898.8
CDS-3UTR GCA 90 bp CAGGTCTTTGCAAGCAATGCAATATCCCAAGGTTCCTGTCGGGCACAGTGGTGTGTCCAGAGACCTTCATaGCCTTTGGATGCAAGACAC +
Preference number: 4 (lower is better)
Translates to: QVFASNAISQGSCRAQWCVQRPS*PLDARH
Trigger: GTGTCTTGCATCCAAAGGGCATGAAGGTCTCTGGAC...ACACCACTGTGCCCGACAGGAACCTTGGGATATTGCATTGCTTGCAAAGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR CCA 90 bp TTGCAAGCAATGCAATATCCCAAGGTTCCTGTCGGGCACAGTGGTGTGTGCCTGTCTCTTGCCTTCTTTTaGTCCCTCCTTGGGATCTCA +
Preference number: 4 (lower is better)
Translates to: LQAMQYPKVPVGHSGVCLSLAFF*SLLGIS
Trigger: TGAGATCCCAAGGAGGGACCAAAAGAAGGCAAGAGA...CAGGCACACACCACTGTGCCCGACAGGAACCTTGGGATATTGCATTGCTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR TCA 90 bp CCAGGTCTTTGCAAGCAATGCAATATCCCAAGGTTCCTGTCGGGCACAGTGGTGCCAAGAAAGGCAACTTaGTATTGGCTAGGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: PGLCKQCNIPRFLSGTVVPRKAT*YWLGLW
Trigger: CCACAAACCTAGCCAATATCAAGTTGCCTTTCTTGG...CACCACTGTGCCCGACAGGAACCTTGGGATATTGCATTGCTTGCAAAGACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
CDS-3UTR TCA 90 bp CAGGTCTTTGCAAGCAATGCAATATCCCAAGGTTCCTGTCGGGCACAGTGGTGTGCCTGCGTGACAGTGTaGGACCACATTATAACAACT +
Preference number: 4 (lower is better)
Translates to: QVFASNAISQGSCRAQWCACVTV*DHIITT
Trigger: AGTTGTTATAATGTGGTCTCACACTGTCACGCAGGC...ACACCACTGTGCCCGACAGGAACCTTGGGATATTGCATTGCTTGCAAAGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512468.5
CDS-3UTR GCA 90 bp AAAGGCAACTTGATATTGGCTAGGTTTGTGGACCAGGTCTTTGCAAGCAATGCACTCAAGCCCAGGAGGTaGACAACATTCCAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: KGNLILARFVDQVFASNALKPRR*TTFQPA
Trigger: CGCAGGCTGGAATGTTGTGCACCTCCTGGGCTTGAG...TGCATTGCTTGCAAAGACCTGGTCCACAAACCTAGCCAATATCAAGTTGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512468.5
CDS-3UTR CCA 90 bp AACAAACTGAGTTCCACTGAAATTAAGAGATTTTCTCGGTCTCTGGGCGGGCCGTCTTCTCAAACCGGCTaGCCTTTCCCTCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: NKLSSTEIKRFSRSLGGPSSQTG*PFPQEK
Trigger: CTTCTCCTGAGGGAAAGGCCAGCCGGTTTGAGAAGA...CGGCCCGCCCAGAGACCGAGAAAATCTCTTAATTTCAGTGGAACTCAGTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295898.8
CDS-3UTR CCA 90 bp TTTGCAAGCAATGCAATATCCCAAGGTTCCTGTCGGGCACAGTGGTGTGTGCCTGACCTTCATGCCCTTTaGATGCAAGACACAGAGTAC +
Preference number: 4 (lower is better)
Translates to: FASNAISQGSCRAQWCVPDLHAL*MQDTEY
Trigger: GTACTCTGTGTCTTGCATCCAAAGGGCATGAAGGTC...AGGCACACACCACTGTGCCCGACAGGAACCTTGGGATATTGCATTGCTTGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR GCA 90 bp CAGGTCTTTGCAAGCAATGCAATATCCCAAGGTTCCTGTCGGGCACAGTGGTGTGAGTTTGATAGATTCTaGAGAAGGGAGCAGTCCATC +
Preference number: 4 (lower is better)
Translates to: QVFASNAISQGSCRAQWCEFDRF*RREQSI
Trigger: GATGGACTGCTCCCTTCTGCAGAATCTATCAAACTC...ACACCACTGTGCCCGACAGGAACCTTGGGATATTGCATTGCTTGCAAAGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
CDS-3UTR GCA 90 bp TTGCAAGCAATGCAATATCCCAAGGTTCCTGTCGGGCACAGTGGTGTGTGCCTGTTCATGCCCTTTGGATaGAAGACACAGAGTACAGAT +
Preference number: 4 (lower is better)
Translates to: LQAMQYPKVPVGHSGVCLFMPFG*KTQSTD
Trigger: ATCTGTACTCTGTGTCTTGCATCCAAAGGGCATGAA...CAGGCACACACCACTGTGCCCGACAGGAACCTTGGGATATTGCATTGCTTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR GCA 90 bp AAAGGCAACTTGATATTGGCTAGGTTTGTGGACCAGGTCTTTGCAAGCAATGCATCACTTTACCAGGAATaGGCTGTGTGCGCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: KGNLILARFVDQVFASNASLYQE*AVCAGL
Trigger: AAGCCCCGCGCACACAGCGCATTCCTGGTAAAGTGA...TGCATTGCTTGCAAAGACCTGGTCCACAAACCTAGCCAATATCAAGTTGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512468.5
CDS-3UTR GCA 90 bp TTGCAAGCAATGCAATATCCCAAGGTTCCTGTCGGGCACAGTGGTGTGTGCCTGATTTCGTTACATAGGTaGCTGATGGAATGTCACAGA +
Preference number: 4 (lower is better)
Translates to: LQAMQYPKVPVGHSGVCLISLHR*LMECHR
Trigger: TCTGTGACATTCCATCAGGCACCTATGTAACGAAAT...CAGGCACACACCACTGTGCCCGACAGGAACCTTGGGATATTGCATTGCTTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
CDS-3UTR GCA 90 bp ACGCTTCACTTCATACTCCCTTTCGAGTTTGATAGATTCTGCAGAAGGGAGCAGCTCAAGCCCAGGAGGTaGACAACATTCCAGCACATT +
Preference number: 4 (lower is better)
Translates to: TLHFILPFEFDRFCRREQLKPRR*TTFQHI
Trigger: AATGTGCTGGAATGTTGTGCACCTCCTGGGCTTGAG...CTGCTCCCTTCTGCAGAATCTATCAAACTCGAAAGGGAGTATGAAGTGAAGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR CCA 90 bp AACAAACTGAGTTCCACTGAAATTAAGAGATTTTCTCGGTCTCTGGGCGGGCCGCACTGTGTTCTTTCTTaGCACTCCATACGCCATGGT +
Preference number: 4 (lower is better)
Translates to: NKLSSTEIKRFSRSLGGPHCVLS*HSIRHG
Trigger: ACCATGGCGTATGGAGTGCCAAGAAAGAACACAGTG...CGGCCCGCCCAGAGACCGAGAAAATCTCTTAATTTCAGTGGAACTCAGTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295898.8
CDS-3UTR CCA 90 bp TCAAATATCTGCCCTGAACTATACATAGTGAAAGGTCCAGAGACCTTCATGCCCTGGCCCATCCACCAGTaGGCATTCAAATATCTGCCC +
Preference number: 4 (lower is better)
Translates to: SNICPELYIVKGPETFMPWPIHQ*AFKYLP
Trigger: GGGCAGATATTTGAATGCCCACTGGTGGATGGGCCA...GGGCATGAAGGTCTCTGGACCTTTCACTATGTATAGTTCAGGGCAGATATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR CCA 90 bp CTAGGTTTGTGGACCAGGTCTTTGCAAGCAATGCAATATCCCAAGGTTCCTGTCTCCTTTGTAGGGACATaGGTGAAGCTGGAAACCATC +
Preference number: 4 (lower is better)
Translates to: LGLWTRSLQAMQYPKVPVSFVGT*VKLETI
Trigger: GATGGTTTCCAGCTTCACCCATGTCCCTACAAAGGA...GACAGGAACCTTGGGATATTGCATTGCTTGCAAAGACCTGGTCCACAAACCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR TCA 90 bp AACAAACTGAGTTCCACTGAAATTAAGAGATTTTCTCGGTCTCTGGGCGGGCCGCGTTACATAGGTGCCTaGTGGAATGTCACAGATAAC +
Preference number: 4 (lower is better)
Translates to: NKLSSTEIKRFSRSLGGPRYIGA*WNVTDN
Trigger: GTTATCTGTGACATTCCATCAGGCACCTATGTAACG...CGGCCCGCCCAGAGACCGAGAAAATCTCTTAATTTCAGTGGAACTCAGTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295898.8
CDS-3UTR TCA 90 bp AACAAACTGAGTTCCACTGAAATTAAGAGATTTTCTCGGTCTCTGGGCGGGCCGCCAAGAAAGGCAACTTaGTATTGGCTAGGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: NKLSSTEIKRFSRSLGGPPRKAT*YWLGLW
Trigger: CCACAAACCTAGCCAATATCAAGTTGCCTTTCTTGG...CGGCCCGCCCAGAGACCGAGAAAATCTCTTAATTTCAGTGGAACTCAGTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295898.8
CDS-3UTR GCA 90 bp AACAAACTGAGTTCCACTGAAATTAAGAGATTTTCTCGGTCTCTGGGCGGGCCGGGTCTTTGCAAGCAATaGAATATCCCAAGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: NKLSSTEIKRFSRSLGGPGLCKQ*NIPRFL
Trigger: CAGGAACCTTGGGATATTGCATTGCTTGCAAAGACC...CGGCCCGCCCAGAGACCGAGAAAATCTCTTAATTTCAGTGGAACTCAGTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295898.8
CDS-3UTR GCA 90 bp CTAGGTTTGTGGACCAGGTCTTTGCAAGCAATGCAATATCCCAAGGTTCCTGTCGGTCTTTGCAAGCAATaGAATATCCCAAGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: LGLWTRSLQAMQYPKVPVGLCKQ*NIPRFL
Trigger: CAGGAACCTTGGGATATTGCATTGCTTGCAAAGACC...GACAGGAACCTTGGGATATTGCATTGCTTGCAAAGACCTGGTCCACAAACCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
CDS-3UTR GCA 90 bp AACAAACTGAGTTCCACTGAAATTAAGAGATTTTCTCGGTCTCTGGGCGGGCCGTGTGGACCAGGTCTTTaGAAGCAATGCAATATCCCA +
Preference number: 4 (lower is better)
Translates to: NKLSSTEIKRFSRSLGGPCGPGL*KQCNIP
Trigger: TGGGATATTGCATTGCTTGCAAAGACCTGGTCCACA...CGGCCCGCCCAGAGACCGAGAAAATCTCTTAATTTCAGTGGAACTCAGTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295898.8
CDS-3UTR GCA 90 bp AACAAACTGAGTTCCACTGAAATTAAGAGATTTTCTCGGTCTCTGGGCGGGCCGGAGTTTGATAGATTCTaGAGAAGGGAGCAGTCCATC +
Preference number: 4 (lower is better)
Translates to: NKLSSTEIKRFSRSLGGPEFDRF*RREQSI
Trigger: GATGGACTGCTCCCTTCTGCAGAATCTATCAAACTC...CGGCCCGCCCAGAGACCGAGAAAATCTCTTAATTTCAGTGGAACTCAGTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295898.8
CDS-3UTR CCA 90 bp CTTACAGTGCTGTCGTTTGTGACACAAGGAACAAGAGTATGTCAGGGACTCAGACACTGTGTTCTTTCTTaGCACTCCATACGCCATGGT +
Preference number: 4 (lower is better)
Translates to: LTVLSFVTQGTRVCQGLRHCVLS*HSIRHG
Trigger: ACCATGGCGTATGGAGTGCCAAGAAAGAACACAGTG...TCTGAGTCCCTGACATACTCTTGTTCCTTGTGTCACAAACGACAGCACTGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR CCA 90 bp AACAAACTGAGTTCCACTGAAATTAAGAGATTTTCTCGGTCTCTGGGCGGGCCGTATTGGCTAGGTTTGTaGACCAGGTCTTTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: NKLSSTEIKRFSRSLGGPYWLGL*TRSLQA
Trigger: TGCTTGCAAAGACCTGGTCCACAAACCTAGCCAATA...CGGCCCGCCCAGAGACCGAGAAAATCTCTTAATTTCAGTGGAACTCAGTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295898.8
CDS-3UTR TCA 90 bp GAGTATGTCAGGGACTCAGAAGATCTGTCAGAACTGGGTACTAACCCACAGCTGGTGAGAATTGAAAAATaGGAACACTTGGACACAGGA +
Preference number: 4 (lower is better)
Translates to: EYVRDSEDLSELGTNPQLVRIEK*EHLDTG
Trigger: TCCTGTGTCCAAGTGTTCTCATTTTTCAATTCTCAC...CAGCTGTGGGTTAGTACCCAGTTCTGACAGATCTTCTGAGTCCCTGACATACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR TCA 90 bp GTCTTTGCAAGCAATGCAATATCCCAAGGTTCCTGTCGGGCACAGTGGTGTGTGCTCATAGGTGAGAATTaGAAAATGAGAACACTTGGA +
Preference number: 4 (lower is better)
Translates to: VFASNAISQGSCRAQWCVLIGEN*KMRTLG
Trigger: TCCAAGTGTTCTCATTTTTCAATTCTCACCTATGAG...CACACACCACTGTGCCCGACAGGAACCTTGGGATATTGCATTGCTTGCAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR GCA 90 bp CTTACAGTGCTGTCGTTTGTGACACAAGGAACAAGAGTATGTCAGGGACTCAGAGAGTTTGATAGATTCTaGAGAAGGGAGCAGTCCATC +
Preference number: 4 (lower is better)
Translates to: LTVLSFVTQGTRVCQGLREFDRF*RREQSI
Trigger: GATGGACTGCTCCCTTCTGCAGAATCTATCAAACTC...TCTGAGTCCCTGACATACTCTTGTTCCTTGTGTCACAAACGACAGCACTGTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR TCA 90 bp AAAGGCAACTTGATATTGGCTAGGTTTGTGGACCAGGTCTTTGCAAGCAATGCACGTTACATAGGTGCCTaGTGGAATGTCACAGATAAC +
Preference number: 4 (lower is better)
Translates to: KGNLILARFVDQVFASNARYIGA*WNVTDN
Trigger: GTTATCTGTGACATTCCATCAGGCACCTATGTAACG...TGCATTGCTTGCAAAGACCTGGTCCACAAACCTAGCCAATATCAAGTTGCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
CDS-3UTR TCA 90 bp TCAAATATCTGCCCTGAACTATACATAGTGAAAGGTCCAGAGACCTTCATGCCCCCAAGAAAGGCAACTTaGTATTGGCTAGGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: SNICPELYIVKGPETFMPPRKAT*YWLGLW
Trigger: CCACAAACCTAGCCAATATCAAGTTGCCTTTCTTGG...GGGCATGAAGGTCTCTGGACCTTTCACTATGTATAGTTCAGGGCAGATATTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR GCA 90 bp AACAAACTGAGTTCCACTGAAATTAAGAGATTTTCTCGGTCTCTGGGCGGGCCGATTTCGTTACATAGGTaGCTGATGGAATGTCACAGA +
Preference number: 4 (lower is better)
Translates to: NKLSSTEIKRFSRSLGGPISLHR*LMECHR
Trigger: TCTGTGACATTCCATCAGGCACCTATGTAACGAAAT...CGGCCCGCCCAGAGACCGAGAAAATCTCTTAATTTCAGTGGAACTCAGTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295898.8
CDS-3UTR GCA 90 bp AAGACGCTTCACTTCATACTCCCTTTCGAGTTTGATAGATTCTGCAGAAGGGAGTGTGGACCAGGTCTTTaGAAGCAATGCAATATCCCA +
Preference number: 4 (lower is better)
Translates to: KTLHFILPFEFDRFCRRECGPGL*KQCNIP
Trigger: TGGGATATTGCATTGCTTGCAAAGACCTGGTCCACA...CTCCCTTCTGCAGAATCTATCAAACTCGAAAGGGAGTATGAAGTGAAGCGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
CDS-3UTR GCA 90 bp AACAAACTGAGTTCCACTGAAATTAAGAGATTTTCTCGGTCTCTGGGCGGGCCGGTACATTTTGTGAGCTaGACAGAACCACCAAATGAA +
Preference number: 4 (lower is better)
Translates to: NKLSSTEIKRFSRSLGGPVHFVS*TEPPNE
Trigger: TTCATTTGGTGGTTCTGTGCAGCTCACAAAATGTAC...CGGCCCGCCCAGAGACCGAGAAAATCTCTTAATTTCAGTGGAACTCAGTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295898.8
CDS-3UTR CCA 90 bp AAAGGCAACTTGATATTGGCTAGGTTTGTGGACCAGGTCTTTGCAAGCAATGCATATTGGCTAGGTTTGTaGACCAGGTCTTTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: KGNLILARFVDQVFASNAYWLGL*TRSLQA
Trigger: TGCTTGCAAAGACCTGGTCCACAAACCTAGCCAATA...TGCATTGCTTGCAAAGACCTGGTCCACAAACCTAGCCAATATCAAGTTGCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
CDS-3UTR CCA 90 bp TTAATGGTGGTACATTTTGTGAGCTGCACAGAACCACCAAATGAAATTTCTTCCTCTTCTCAAACCGGCTaGCCTTTCCCTCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LMVVHFVSCTEPPNEISSSSQTG*PFPQEK
Trigger: CTTCTCCTGAGGGAAAGGCCAGCCGGTTTGAGAAGA...GGAAGAAATTTCATTTGGTGGTTCTGTGCAGCTCACAAAATGTACCACCATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR GCA 90 bp AACAAACTGAGTTCCACTGAAATTAAGAGATTTTCTCGGTCTCTGGGCGGGCCGGTACATTATAACAACTaGCCCGCAAAATGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: NKLSSTEIKRFSRSLGGPVHYNN*PAKWFS
Trigger: TGAAAACCATTTTGCGGGGCAGTTGTTATAATGTAC...CGGCCCGCCCAGAGACCGAGAAAATCTCTTAATTTCAGTGGAACTCAGTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295898.8
CDS-3UTR CCA 90 bp AAAGGCAACTTGATATTGGCTAGGTTTGTGGACCAGGTCTTTGCAAGCAATGCACTTTTGGTCCCTCCTTaGGATCTCAAAGATGCATAT +
Preference number: 4 (lower is better)
Translates to: KGNLILARFVDQVFASNALLVPP*DLKDAY
Trigger: ATATGCATCTTTGAGATCCCAAGGAGGGACCAAAAG...TGCATTGCTTGCAAAGACCTGGTCCACAAACCTAGCCAATATCAAGTTGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR GCA 90 bp GGCAACTTGATATTGGCTAGGTTTGTGGACCAGGTCTTTGCAAGCAATGCAATAGTACATTTTGTGAGCTaGACAGAACCACCAAATGAA +
Preference number: 4 (lower is better)
Translates to: GNLILARFVDQVFASNAIVHFVS*TEPPNE
Trigger: TTCATTTGGTGGTTCTGTGCAGCTCACAAAATGTAC...TATTGCATTGCTTGCAAAGACCTGGTCCACAAACCTAGCCAATATCAAGTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
CDS-3UTR GCA 90 bp TTCATGTCCTTTGTAGGGACATGGGTGAAGCTGGAAACCATCATTCTCAGCAAAGGGCATTCAAATATCTaGCCTGAACTATACATAGTG +
Preference number: 4 (lower is better)
Translates to: FMSFVGTWVKLETIILSKGHSNI*PELYIV
Trigger: CACTATGTATAGTTCAGGGCAGATATTTGAATGCCC...TTTGCTGAGAATGATGGTTTCCAGCTTCACCCATGTCCCTACAAAGGACATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR GCA 90 bp ATCTGCCCTGAACTATACATAGTGAAAGGTCCAGAGACCTTCATGCCCTTTGGAAAAATGTGGCACAAATaGACCATGGAATACTATGCA +
Preference number: 4 (lower is better)
Translates to: ICPELYIVKGPETFMPFGKMWHK*TMEYYA
Trigger: TGCATAGTATTCCATGGTGCATTTGTGCCACATTTT...TCCAAAGGGCATGAAGGTCTCTGGACCTTTCACTATGTATAGTTCAGGGCAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR GCA 90 bp GGCAACTTGATATTGGCTAGGTTTGTGGACCAGGTCTTTGCAAGCAATGCAATACCACATTATAACAACTaGCCCGCAAAATGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: GNLILARFVDQVFASNAIPHYNN*PAKWFS
Trigger: TGAAAACCATTTTGCGGGGCAGTTGTTATAATGTGG...TATTGCATTGCTTGCAAAGACCTGGTCCACAAACCTAGCCAATATCAAGTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512468.5
CDS-3UTR CCA 90 bp CAGTTTACAAAGACGCTTCACTTCATACTCCCTTTCGAGTTTGATAGATTCTGCTATTGGCTAGGTTTGTaGACCAGGTCTTTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: QFTKTLHFILPFEFDRFCYWLGL*TRSLQA
Trigger: TGCTTGCAAAGACCTGGTCCACAAACCTAGCCAATA...GCAGAATCTATCAAACTCGAAAGGGAGTATGAAGTGAAGCGTCTTTGTAAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
3UTR CAA 72 bp GAACCACCAAATGAAATTTCTTCCAAGAAAGGCAACTaGATATTGGCTAGGTTTGTGGACCAGGTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: EPPNEISSKKGN*ILARFVDQVFA
Trigger: TGCAAAGACCTGGTCCACAAACCTAGCCAATATCAAGTTGCCTTTCTTGGAAGAAATTTCATTTGGTGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
CDS-3UTR TCA 90 bp TTTGATAGATTCTGCAGAAGGGAGCAGTCCATCTTTAATGGTGGTACATTTTGTCGTTACATAGGTGCCTaGTGGAATGTCACAGATAAC +
Preference number: 4 (lower is better)
Translates to: FDRFCRREQSIFNGGTFCRYIGA*WNVTDN
Trigger: GTTATCTGTGACATTCCATCAGGCACCTATGTAACG...ACAAAATGTACCACCATTAAAGATGGACTGCTCCCTTCTGCAGAATCTATCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
CDS-3UTR TCA 90 bp AAAGGCAACTTGATATTGGCTAGGTTTGTGGACCAGGTCTTTGCAAGCAATGCAGATTCAATCATGAACTaGCTGTCATTTAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: KGNLILARFVDQVFASNADSIMN*LSFRWK
Trigger: CTTCCATCTAAATGACAGTCAGTTCATGATTGAATC...TGCATTGCTTGCAAAGACCTGGTCCACAAACCTAGCCAATATCAAGTTGCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR TCA 90 bp GGCAACTTGATATTGGCTAGGTTTGTGGACCAGGTCTTTGCAAGCAATGCAATAGTTCTCACTCATAGGTaGGAATTGAAAAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: GNLILARFVDQVFASNAIVLTHR*ELKNEN
Trigger: GTTCTCATTTTTCAATTCTCACCTATGAGTGAGAAC...TATTGCATTGCTTGCAAAGACCTGGTCCACAAACCTAGCCAATATCAAGTTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR GCA 90 bp TTTGATAGATTCTGCAGAAGGGAGCAGTCCATCTTTAATGGTGGTACATTTTGTGGTCTTTGCAAGCAATaGAATATCCCAAGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: FDRFCRREQSIFNGGTFCGLCKQ*NIPRFL
Trigger: CAGGAACCTTGGGATATTGCATTGCTTGCAAAGACC...ACAAAATGTACCACCATTAAAGATGGACTGCTCCCTTCTGCAGAATCTATCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
CDS-3UTR GCA 90 bp TCGAGTTTGATAGATTCTGCAGAAGGGAGCAGTCCATCTTTAATGGTGGTACATGCACATTATAACAACTaGCCCGCAAAATGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: SSLIDSAEGSSPSLMVVHAHYNN*PAKWFS
Trigger: TGAAAACCATTTTGCGGGGCAGTTGTTATAATGTGC...ATGTACCACCATTAAAGATGGACTGCTCCCTTCTGCAGAATCTATCAAACTCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR GCA 90 bp TCAAATATCTGCCCTGAACTATACATAGTGAAAGGTCCAGAGACCTTCATGCCCCGACTCAACTCCAAATaGATTTTCATCTACTTACAG +
Preference number: 4 (lower is better)
Translates to: SNICPELYIVKGPETFMPRLNSK*IFIYLQ
Trigger: CTGTAAGTAGATGAAAATGCATTTGGAGTTGAGTCG...GGGCATGAAGGTCTCTGGACCTTTCACTATGTATAGTTCAGGGCAGATATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR CCA 90 bp TTTGATAGATTCTGCAGAAGGGAGCAGTCCATCTTTAATGGTGGTACATTTTGTAAGATCTGTCAGAACTaGGTACTAACCCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: FDRFCRREQSIFNGGTFCKICQN*VLTHSC
Trigger: ACAGCTGTGGGTTAGTACCCAGTTCTGACAGATCTT...ACAAAATGTACCACCATTAAAGATGGACTGCTCCCTTCTGCAGAATCTATCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR GCA 90 bp TTACAAAGACGCTTCACTTCATACTCCCTTTCGAGTTTGATAGATTCTGCAGAAAGAGAATTTCTCTCTTaGCTTCTTTTGGTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LQRRFTSYSLSSLIDSAEREFLS*LLLVPP
Trigger: AGGAGGGACCAAAAGAAGGCAAGAGAGAAATTCTCT...TTCTGCAGAATCTATCAAACTCGAAAGGGAGTATGAAGTGAAGCGTCTTTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR GCA 90 bp TTACAAAGACGCTTCACTTCATACTCCCTTTCGAGTTTGATAGATTCTGCAGAAATTTCGTTACATAGGTaGCTGATGGAATGTCACAGA +
Preference number: 4 (lower is better)
Translates to: LQRRFTSYSLSSLIDSAEISLHR*LMECHR
Trigger: TCTGTGACATTCCATCAGGCACCTATGTAACGAAAT...TTCTGCAGAATCTATCAAACTCGAAAGGGAGTATGAAGTGAAGCGTCTTTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
CDS-3UTR CCA 90 bp TTTGATAGATTCTGCAGAAGGGAGCAGTCCATCTTTAATGGTGGTACATTTTGTTGGATTAAGAAAATGTaGCACAAATGCACCATGGAA +
Preference number: 4 (lower is better)
Translates to: FDRFCRREQSIFNGGTFCWIKKM*HKCTME
Trigger: TTCCATGGTGCATTTGTGCCACATTTTCTTAATCCA...ACAAAATGTACCACCATTAAAGATGGACTGCTCCCTTCTGCAGAATCTATCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS CCA 90 bp CCTCCGACTCGCCAGGAATGCGCTGTGTGCGCGGGGCTTCCAGGGTaGCGGGTCCCCGCGAGCCGGCGCCGGCGGCCTGGTTACCCGGGC +
Preference number: 5 (lower is better)
Translates to: PPTRQECAVCAGLPG*RVPASRRRRPGYPG
Trigger: GCCCGGGTAACCAGGCCGCCGGCGCCGGCTCGCGGGGACCCGCCACCCTGGAAGCCCCGCGCACACAGCGCATTCCTGGCGAGTCGGAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295898.8
ENST00000504371.1
ENST00000506308.5
CDS CCA 90 bp CGGACGGACGCGCAGGGCCCGGGAGGAACTGGTTCCCGGGACGGGTaGGGGCCTCGGCCGCCCACAGAGCCCGCGGAGAAGGGAACGGCC +
Preference number: 5 (lower is better)
Translates to: RTDAQGPGGTGSRDG*GPRPPTEPAEKGTA
Trigger: GGCCGTTCCCTTCTCCGCGGGCTCTGTGGGCGGCCGAGGCCCCCACCCGTCCCGGGAACCAGTTCCTCCCGGGCCCTGCGCGTCCGTCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506308.5
CDS CCA 90 bp CGCGGCCGGGGTACTGAGGTAAGAGCGCGCTGCGCTAAGCGCACATaGCCGCGCACACGCCTCGGGGCCGCGCCGCAGGCACACGCCTCC +
Preference number: 5 (lower is better)
Translates to: RGRGTEVRARCAKRT*PRTRLGAAPQAHAS
Trigger: GGAGGCGTGTGCCTGCGGCGCGGCCCCGAGGCGTGTGCGCGGCCATGTGCGCTTAGCGCAGCGCGCTCTTACCTCAGTACCCCGGCCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295898.8
ENST00000462714.6
ENST00000504008.1
ENST00000504371.1
ENST00000506308.5
CDS CCA 90 bp TCACTTTACCCTTCCCCGGACGGACGCGCAGGGCCCGGGAGGAACTaGTTCCCGGGACGGGTGGGGGCCTCGGCCGCCCACAGAGCCCGC +
Preference number: 5 (lower is better)
Translates to: SLYPSPDGRAGPGRN*FPGRVGASAAHRAR
Trigger: GCGGGCTCTGTGGGCGGCCGAGGCCCCCACCCGTCCCGGGAACCAGTTCCTCCCGGGCCCTGCGCGTCCGTCCGGGGAAGGGTAAAGTGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506308.5
CDS CCA 90 bp TGTTCACTTTACCAGGAATGCGCTGTGTGCGCGGGGCTTCCAGGGTaGCGGGTCCCCGCGAGCCGGCGCCGGCGGCCTGGTTACCCGGGC +
Preference number: 5 (lower is better)
Translates to: CSLYQECAVCAGLPG*RVPASRRRRPGYPG
Trigger: GCCCGGGTAACCAGGCCGCCGGCGCCGGCTCGCGGGGACCCGCCACCCTGGAAGCCCCGCGCACACAGCGCATTCCTGGTAAAGTGAACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512468.5
CDS GCA 90 bp ATAACTCTGTTCACTTTACCTCCGACTCGCCAGGAATGCGCTGTGTaGGCGGGGCTTCCAGGGTGGCGGGTCCCCGCGAGCCGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: ITLFTLPPTRQECAV*AGLPGWRVPASRRR
Trigger: CCGGCGCCGGCTCGCGGGGACCCGCCACCCTGGAAGCCCCGCGCACACAGCGCATTCCTGGCGAGTCGGAGGTAAAGTGAACAGAGTTAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504371.1
CDS-3UTR CAA 90 bp CCAGGTCTTTGCAAGCAATGCAATATCCCAAGGTTCCTGTCGGGCACAGTGGTGTCACTGTGTTCTTTCTaGGCACTCCATACGCCATGG +
Preference number: 5 (lower is better)
Translates to: PGLCKQCNIPRFLSGTVVSLCSF*ALHTPW
Trigger: CCATGGCGTATGGAGTGCCAAGAAAGAACACAGTGA...CACCACTGTGCCCGACAGGAACCTTGGGATATTGCATTGCTTGCAAAGACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
CDS-3UTR CAA 90 bp TTTGCAAGCAATGCAATATCCCAAGGTTCCTGTCGGGCACAGTGGTGTGTGCCTTCACTGTGTTCTTTCTaGGCACTCCATACGCCATGG +
Preference number: 5 (lower is better)
Translates to: FASNAISQGSCRAQWCVPSLCSF*ALHTPW
Trigger: CCATGGCGTATGGAGTGCCAAGAAAGAACACAGTGA...AGGCACACACCACTGTGCCCGACAGGAACCTTGGGATATTGCATTGCTTGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
CDS-3UTR CAA 90 bp CAGGTCTTTGCAAGCAATGCAATATCCCAAGGTTCCTGTCGGGCACAGTGGTGTTTGTGGACCAGGTCTTaGCAAGCAATGCAATATCCC +
Preference number: 5 (lower is better)
Translates to: QVFASNAISQGSCRAQWCLWTRS*QAMQYP
Trigger: GGGATATTGCATTGCTTGCAAAGACCTGGTCCACAA...ACACCACTGTGCCCGACAGGAACCTTGGGATATTGCATTGCTTGCAAAGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
CDS-3UTR CAA 90 bp AACAAACTGAGTTCCACTGAAATTAAGAGATTTTCTCGGTCTCTGGGCGGGCCGTCACTGTGTTCTTTCTaGGCACTCCATACGCCATGG +
Preference number: 5 (lower is better)
Translates to: NKLSSTEIKRFSRSLGGPSLCSF*ALHTPW
Trigger: CCATGGCGTATGGAGTGCCAAGAAAGAACACAGTGA...CGGCCCGCCCAGAGACCGAGAAAATCTCTTAATTTCAGTGGAACTCAGTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295898.8
CDS-3UTR CAA 90 bp TGCAAGCAATGCAATATCCCAAGGTTCCTGTCGGGCACAGTGGTGTGTGCCTGTTCCAAGAAAGGCAACTaGATATTGGCTAGGTTTGTG +
Preference number: 5 (lower is better)
Translates to: CKQCNIPRFLSGTVVCACSKKGN*ILARFV
Trigger: CACAAACCTAGCCAATATCAAGTTGCCTTTCTTGGA...ACAGGCACACACCACTGTGCCCGACAGGAACCTTGGGATATTGCATTGCTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
CDS-3UTR CAA 90 bp GTCTTTGCAAGCAATGCAATATCCCAAGGTTCCTGTCGGGCACAGTGGTGTGTGTACTCCCTTTCGAGTTaGATAGATTCTGCAGAAGGG +
Preference number: 5 (lower is better)
Translates to: VFASNAISQGSCRAQWCVYSLSS*IDSAEG
Trigger: CCCTTCTGCAGAATCTATCAAACTCGAAAGGGAGTA...CACACACCACTGTGCCCGACAGGAACCTTGGGATATTGCATTGCTTGCAAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
CDS-3UTR CAA 90 bp CAGGTCTTTGCAAGCAATGCAATATCCCAAGGTTCCTGTCGGGCACAGTGGTGTTCTTTTGGTCCCTCCTaGGGATCTCAAAGATGCATA +
Preference number: 5 (lower is better)
Translates to: QVFASNAISQGSCRAQWCSFGPS*GSQRCI
Trigger: TATGCATCTTTGAGATCCCAAGGAGGGACCAAAAGA...ACACCACTGTGCCCGACAGGAACCTTGGGATATTGCATTGCTTGCAAAGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS-3UTR CAA 90 bp AACAAACTGAGTTCCACTGAAATTAAGAGATTTTCTCGGTCTCTGGGCGGGCCGTTGTGGACCAGGTCTTaGCAAGCAATGCAATATCCC +
Preference number: 5 (lower is better)
Translates to: NKLSSTEIKRFSRSLGGPLWTRS*QAMQYP
Trigger: GGGATATTGCATTGCTTGCAAAGACCTGGTCCACAA...CGGCCCGCCCAGAGACCGAGAAAATCTCTTAATTTCAGTGGAACTCAGTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295898.8
CDS-3UTR CAA 90 bp GGCAACTTGATATTGGCTAGGTTTGTGGACCAGGTCTTTGCAAGCAATGCAATACTCTCTTGCCTTCTTTaGGTCCCTCCTTGGGATCTC +
Preference number: 5 (lower is better)
Translates to: GNLILARFVDQVFASNAILSCLL*VPPWDL
Trigger: GAGATCCCAAGGAGGGACCAAAAGAAGGCAAGAGAG...TATTGCATTGCTTGCAAAGACCTGGTCCACAAACCTAGCCAATATCAAGTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS GCA 90 bp ACTCAAGCCCAGGAGGTGCACAACATTCCAGCACATTATAACAACTaGCCCGCAAAATGGTTTTCACTGTGTTCTTTCTTGGCACTCCAT +
Preference number: 5 (lower is better)
Translates to: TQAQEVHNIPAHYNN*PAKWFSLCSFLALH
Trigger: ATGGAGTGCCAAGAAAGAACACAGTGAAAACCATTTTGCGGGGCAGTTGTTATAATGTGCTGGAATGTTGTGCACCTCCTGGGCTTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS CCA 90 bp GCGCTTCAGGTGTCATTTAGATGGAAGAGGTCTTCTCAAACCGGCTaGCCTTTCCCTCAGGAGAAGCTGAATTTCCTTAGATGTATTTTC +
Preference number: 5 (lower is better)
Translates to: ALQVSFRWKRSSQTG*PFPQEKLNFLRCIF
Trigger: GAAAATACATCTAAGGAAATTCAGCTTCTCCTGAGGGAAAGGCCAGCCGGTTTGAGAAGACCTCTTCCATCTAAATGACACCTGAAGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295898.8
CDS-3UTR CAA 90 bp AACAAACTGAGTTCCACTGAAATTAAGAGATTTTCTCGGTCTCTGGGCGGGCCGAAAGGCAACTTGATATaGGCTAGGTTTGTGGACCAG +
Preference number: 5 (lower is better)
Translates to: NKLSSTEIKRFSRSLGGPKGNLI*ARFVDQ
Trigger: CTGGTCCACAAACCTAGCCAATATCAAGTTGCCTTT...CGGCCCGCCCAGAGACCGAGAAAATCTCTTAATTTCAGTGGAACTCAGTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295898.8
CDS-3UTR CAA 90 bp AACAAACTGAGTTCCACTGAAATTAAGAGATTTTCTCGGTCTCTGGGCGGGCCGTACTCCCTTTCGAGTTaGATAGATTCTGCAGAAGGG +
Preference number: 5 (lower is better)
Translates to: NKLSSTEIKRFSRSLGGPYSLSS*IDSAEG
Trigger: CCCTTCTGCAGAATCTATCAAACTCGAAAGGGAGTA...CGGCCCGCCCAGAGACCGAGAAAATCTCTTAATTTCAGTGGAACTCAGTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295898.8
CDS-3UTR CAA 90 bp ACGCTTCACTTCATACTCCCTTTCGAGTTTGATAGATTCTGCAGAAGGGAGCAGAAAGGCAACTTGATATaGGCTAGGTTTGTGGACCAG +
Preference number: 5 (lower is better)
Translates to: TLHFILPFEFDRFCRREQKGNLI*ARFVDQ
Trigger: CTGGTCCACAAACCTAGCCAATATCAAGTTGCCTTT...CTGCTCCCTTCTGCAGAATCTATCAAACTCGAAAGGGAGTATGAAGTGAAGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
CDS-3UTR CAA 90 bp AACAAACTGAGTTCCACTGAAATTAAGAGATTTTCTCGGTCTCTGGGCGGGCCGTCCAAGAAAGGCAACTaGATATTGGCTAGGTTTGTG +
Preference number: 5 (lower is better)
Translates to: NKLSSTEIKRFSRSLGGPSKKGN*ILARFV
Trigger: CACAAACCTAGCCAATATCAAGTTGCCTTTCTTGGA...CGGCCCGCCCAGAGACCGAGAAAATCTCTTAATTTCAGTGGAACTCAGTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295898.8
CDS-3UTR CAA 90 bp CTAGGTTTGTGGACCAGGTCTTTGCAAGCAATGCAATATCCCAAGGTTCCTGTCTCCAAGAAAGGCAACTaGATATTGGCTAGGTTTGTG +
Preference number: 5 (lower is better)
Translates to: LGLWTRSLQAMQYPKVPVSKKGN*ILARFV
Trigger: CACAAACCTAGCCAATATCAAGTTGCCTTTCTTGGA...GACAGGAACCTTGGGATATTGCATTGCTTGCAAAGACCTGGTCCACAAACCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
CDS-3UTR CAA 90 bp GGCAACTTGATATTGGCTAGGTTTGTGGACCAGGTCTTTGCAAGCAATGCAATAAAAGGCAACTTGATATaGGCTAGGTTTGTGGACCAG +
Preference number: 5 (lower is better)
Translates to: GNLILARFVDQVFASNAIKGNLI*ARFVDQ
Trigger: CTGGTCCACAAACCTAGCCAATATCAAGTTGCCTTT...TATTGCATTGCTTGCAAAGACCTGGTCCACAAACCTAGCCAATATCAAGTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
CDS-3UTR CAA 90 bp AAGACGCTTCACTTCATACTCCCTTTCGAGTTTGATAGATTCTGCAGAAGGGAGTACTCCCTTTCGAGTTaGATAGATTCTGCAGAAGGG +
Preference number: 5 (lower is better)
Translates to: KTLHFILPFEFDRFCRREYSLSS*IDSAEG
Trigger: CCCTTCTGCAGAATCTATCAAACTCGAAAGGGAGTA...CTCCCTTCTGCAGAATCTATCAAACTCGAAAGGGAGTATGAAGTGAAGCGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462714.6
ENST00000512468.5
CDS CCA 72 bp CGCCAGGAATGCGCTGTGTGCGCGGGGCTTCCAGGGTaGCGGGTCCCCGCGAGCCGGCGCCGGCGGCCTGGT +
Preference number: 6 (lower is better)
Translates to: RQECAVCAGLPG*RVPASRRRRPG
Trigger: ACCAGGCCGCCGGCGCCGGCTCGCGGGGACCCGCCACCCTGGAAGCCCCGCGCACACAGCGCATTCCTGGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295898.8
ENST00000504371.1
ENST00000506308.5
CDS CCA 72 bp CCTTCCCCGGACGGACGCGCAGGGCCCGGGAGGAACTaGTTCCCGGGACGGGTGGGGGCCTCGGCCGCCCAC +
Preference number: 6 (lower is better)
Translates to: PSPDGRAGPGRN*FPGRVGASAAH
Trigger: GTGGGCGGCCGAGGCCCCCACCCGTCCCGGGAACCAGTTCCTCCCGGGCCCTGCGCGTCCGTCCGGGGAAGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506308.5
CDS CCA 72 bp TACCAGGAATGCGCTGTGTGCGCGGGGCTTCCAGGGTaGCGGGTCCCCGCGAGCCGGCGCCGGCGGCCTGGT +
Preference number: 6 (lower is better)
Translates to: YQECAVCAGLPG*RVPASRRRRPG
Trigger: ACCAGGCCGCCGGCGCCGGCTCGCGGGGACCCGCCACCCTGGAAGCCCCGCGCACACAGCGCATTCCTGGTA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512468.5
CDS GCA 72 bp CCCACCCTGCCTCCGACTCGCCAGGAATGCGCTGTGTaGGCGGGGCTTCCAGGGTGGCGGGTCCCCGCGAGC +
Preference number: 6 (lower is better)
Translates to: PTLPPTRQECAV*AGLPGWRVPAS
Trigger: GCTCGCGGGGACCCGCCACCCTGGAAGCCCCGCGCACACAGCGCATTCCTGGCGAGTCGGAGGCAGGGTGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295898.8
ENST00000506308.5
CDS GCA 72 bp GAGGGTCGCGGCCGGGGTACTGAGGTAAGAGCGCGCTaGGCTAAGCGCACATGGCCGCGCACACGCCTCGGG +
Preference number: 6 (lower is better)
Translates to: EGRGRGTEVRAR*AKRTWPRTRLG
Trigger: CCCGAGGCGTGTGCGCGGCCATGTGCGCTTAGCGCAGCGCGCTCTTACCTCAGTACCCCGGCCGCGACCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295898.8
ENST00000462714.6
ENST00000504008.1
ENST00000504371.1
ENST00000506308.5
CDS CCA 72 bp GGTACTGAGGTAAGAGCGCGCTGCGCTAAGCGCACATaGCCGCGCACACGCCTCGGGGCCGCGCCGCAGGCA +
Preference number: 6 (lower is better)
Translates to: GTEVRARCAKRT*PRTRLGAAPQA
Trigger: TGCCTGCGGCGCGGCCCCGAGGCGTGTGCGCGGCCATGTGCGCTTAGCGCAGCGCGCTCTTACCTCAGTACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295898.8
ENST00000462714.6
ENST00000504008.1
ENST00000504371.1
ENST00000506308.5
CDS GCA 72 bp TCAGCCTCGGCTCCTTCCCACACCTGGGCCCCACCCTaGCTCCGACTCGCCAGGAATGCGCTGTGTGCGCGG +
Preference number: 6 (lower is better)
Translates to: SASAPSHTWAPP*LRLARNALCAR
Trigger: CCGCGCACACAGCGCATTCCTGGCGAGTCGGAGGCAGGGTGGGGCCCAGGTGTGGGAAGGAGCCGAGGCTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506308.5
CDS GCA 72 bp TTCACTTTACCTCCGACTCGCCAGGAATGCGCTGTGTaGGCGGGGCTTCCAGGGTGGCGGGTCCCCGCGAGC +
Preference number: 6 (lower is better)
Translates to: FTLPPTRQECAV*AGLPGWRVPAS
Trigger: GCTCGCGGGGACCCGCCACCCTGGAAGCCCCGCGCACACAGCGCATTCCTGGCGAGTCGGAGGTAAAGTGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504371.1
CDS GCA 72 bp GAGGCTGAGATGGGAGGATCACTCAAGCCCAGGAGGTaGACAACATTCCAGCACATTATAACAACTGCCCCG +
Preference number: 6 (lower is better)
Translates to: EAEMGGSLKPRR*TTFQHIITTAP
Trigger: CGGGGCAGTTGTTATAATGTGCTGGAATGTTGTGCACCTCCTGGGCTTGAGTGATCCTCCCATCTCAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462714.6
CDS TCA 72 bp CAGGAGGTGCACAACATTCCAGCCTGCGTGACAGTGTaGGACCACATTATAACAACTGCCCCGCAAAATGGT +
Preference number: 6 (lower is better)
Translates to: QEVHNIPACVTV*DHIITTAPQNG
Trigger: ACCATTTTGCGGGGCAGTTGTTATAATGTGGTCTCACACTGTCACGCAGGCTGGAATGTTGTGCACCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504371.1
ENST00000512468.5
CDS CCA 72 bp GTGTCATTTAGATGGAAGAGGTCTTCTCAAACCGGCTaGCCTTTCCCTCAGGAGAAGCTGAATTTCCTTAGA +
Preference number: 6 (lower is better)
Translates to: VSFRWKRSSQTG*PFPQEKLNFLR
Trigger: TCTAAGGAAATTCAGCTTCTCCTGAGGGAAAGGCCAGCCGGTTTGAGAAGACCTCTTCCATCTAAATGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295898.8