RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C4ORF17 (Homo sapiens)

Ensembl gene IDs: ENSG00000138813

Ensembl transcript IDs: ENST00000326581.9, ENST00000477187.1, ENST00000503257.1, ENST00000514652.5

Found 243 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCCCTAGGATGGAGATCCCAGAGGAAGGAGCAGGCAGACACCTTTaGTGTCTTGCAACTCTCACTGATGATACCTCTAGGTATGGGAAA +
Preference number: 1 (lower is better)
Translates to: PPRMEIPEEGAGRHL*CLATLTDDTSRYGK
Trigger: TTTCCCATACCTAGAGGTATCATCAGTGAGAGTTGCAAGACAGCAAAGGTGTCTGCCTGCTCCTTCCTCTGGGATCTCCATCCTAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477187.1
3UTR TCA 90 bp ATACTTTGGGCTATTTTGGACCAAGGTAGGACTTTCCACAATTCTTaGTTCTCCCTGGTTCCCCTACAGACTGGAGCTGGGCTTCTGGTG +
Preference number: 1 (lower is better)
Translates to: ILWAILDQGRTFHNS*FSLVPLQTGAGLLV
Trigger: CACCAGAAGCCCAGCTCCAGTCTGTAGGGGAACCAGGGAGAATCAAGAATTGTGGAAAGTCCTACCTTGGTCCAAAATAGCCCAAAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514652.5
3UTR TCA 90 bp TCTTGTATACTCCTTGCTGACACTGGTTTTGCTGATCCACTCTCCTaGGTGTTAGGCCTGGGAGGAGAATTTGGTTTGCTGAAATATTCT +
Preference number: 1 (lower is better)
Translates to: SCILLADTGFADPLS*VLGLGGEFGLLKYS
Trigger: AGAATATTTCAGCAAACCAAATTCTCCTCCCAGGCCTAACACTCAGGAGAGTGGATCAGCAAAACCAGTGTCAGCAAGGAGTATACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477187.1
3UTR TCA 90 bp TTTTCAATTGTATTTCAGCTGTCTTGTAGGTCACCTGCTTGTGGCTaGTTGCCATTTTACTCTTCTCTCTGGTTGACTTTGTCTCCAGTG +
Preference number: 1 (lower is better)
Translates to: FSIVFQLSCRSPACG*LPFYSSLWLTLSPV
Trigger: CACTGGAGACAAAGTCAACCAGAGAGAAGAGTAAAATGGCAATCAGCCACAAGCAGGTGACCTACAAGACAGCTGAAATACAATTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514652.5
3UTR TCA 90 bp CAGTGGAACTTGCTGGAGTCTAGGGTGACCCCAGTGAGCTCTAATTaGTTATATATCATTCCTGGTATAAAGGGAACTTGTAGAAATGAC +
Preference number: 1 (lower is better)
Translates to: QWNLLESRVTPVSSN*LYIIPGIKGTCRND
Trigger: GTCATTTCTACAAGTTCCCTTTATACCAGGAATGATATATAATCAATTAGAGCTCACTGGGGTCACCCTAGACTCCAGCAAGTTCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
3UTR TCA 90 bp GATCATTGTCCTTTTGTTAGGTCAATGCAGGGTTTCCCTTTTCACTaGATTGCTATAACCAAACCTATAGTTCCTGTTGTCCTGCTGTCT +
Preference number: 1 (lower is better)
Translates to: DHCPFVRSMQGFPFH*IAITKPIVPVVLLS
Trigger: AGACAGCAGGACAACAGGAACTATAGGTTTGGTTATAGCAATTCAGTGAAAAGGGAAACCCTGCATTGACCTAACAAAAGGACAATGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514652.5
3UTR CAA 90 bp GGATGGAGATCCCAGAGGAAGGAGCAGGCAGACACCTTTGCTGTCTaGCAACTCTCACTGATGATACCTCTAGGTATGGGAAAACTCAAG +
Preference number: 2 (lower is better)
Translates to: GWRSQRKEQADTFAV*QLSLMIPLGMGKLK
Trigger: CTTGAGTTTTCCCATACCTAGAGGTATCATCAGTGAGAGTTGCAAGACAGCAAAGGTGTCTGCCTGCTCCTTCCTCTGGGATCTCCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477187.1
3UTR CAA 90 bp GTAAAACTTCTGCCAGAGAATCAGTATGCAAAATGCTACAGAGCTTaGCCAGGATCTCCTATAGGAGCATTCGAGCCAGCAACAGCTCAG +
Preference number: 2 (lower is better)
Translates to: VKLLPENQYAKCYRA*PGSPIGAFEPATAQ
Trigger: CTGAGCTGTTGCTGGCTCGAATGCTCCTATAGGAGATCCTGGCAAAGCTCTGTAGCATTTTGCATACTGATTCTCTGGCAGAAGTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477187.1
3UTR-3UTR CCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCAAAGGCAACCAGGGTCTaGAGCAGACCCCCAGCAAAC +
Preference number: 2 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSKATRV*SRPPAN
Trigger: GTTTGCTGGGGGTCTGCTCCAGACCCTGGTTGCCTT...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477187.1
3UTR-3UTR TCA 90 bp ATGAAAGAATTCACCCAGTCTAGAACTTCTACCTCCGGTGTGTTGAAGGATAACTGCTGCTGGTTCCATTaGGGTGTTTCTTCTGTGATG +
Preference number: 2 (lower is better)
Translates to: MKEFTQSRTSTSGVLKDNCCWFH*GVSSVM
Trigger: CATCACAGAAGAAACACCTCAATGGAACCAGCAGCA...GTTATCCTTCAACACACCGGAGGTAGAAGTTCTAGACTGGGTGAATTCTTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477187.1
3UTR CAA 90 bp CTGAATTGCTATAACCAAACCTATAGTTCCTGTTGTCCTGCTGTCTaGCTTCTCAAAGAGTGTCTGTCCATGATCAGGCACTTTGCCTTT +
Preference number: 2 (lower is better)
Translates to: LNCYNQTYSSCCPAV*LLKECLSMIRHFAF
Trigger: AAAGGCAAAGTGCCTGATCATGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACAGGAACTATAGGTTTGGTTATAGCAATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514652.5
3UTR-3UTR TCA 90 bp TTCATATTATTTCTTCTTATAAGTAGTGGAGGCTTGTGCTCAGCCTCTTTTGGTTCGGCAAGCTCAGAATaGATCAAAGCTGAGACCCAC +
Preference number: 2 (lower is better)
Translates to: FILFLLISSGGLCSASFGSASSE*IKAETH
Trigger: GTGGGTCTCAGCTTTGATTCATTCTGAGCTTGCCGA...ACCAAAAGAGGCTGAGCACAAGCCTCCACTACTTATAAGAAGAAATAATATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477187.1
3UTR-3UTR CCA 90 bp ATGAAAGAATTCACCCAGTCTAGAACTTCTACCTCCGGTGTGTTGAAGGATAACCCTGGGAGGAGAATTTaGTTTGCTGAAATATTCTGC +
Preference number: 2 (lower is better)
Translates to: MKEFTQSRTSTSGVLKDNPGRRI*FAEIFC
Trigger: GCAGAATATTTCAGCAAACCAAATTCTCCTCCCAGG...GTTATCCTTCAACACACCGGAGGTAGAAGTTCTAGACTGGGTGAATTCTTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477187.1
3UTR-3UTR TCA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAAGACACTCTGGTTGGTTaGTCCCCTTCTGTATCTCTG +
Preference number: 2 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFEDTLVG*SPSVSL
Trigger: CAGAGATACAGAAGGGGATCAACCAACCAGAGTGTC...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477187.1
3UTR-3UTR TCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTAACTGTGGGTGGTaGTTTAACTGTGGGTGGCTT +
Preference number: 2 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSFNCGW*FNCGWL
Trigger: AAGCCACCCACAGTTAAATCACCACCCACAGTTAAA...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477187.1
3UTR-3UTR TCA 90 bp TTCATATTATTTCTTCTTATAAGTAGTGGAGGCTTGTGCTCAGCCTCTTTTGGTTTTTCTTCAGATCCTTaGCTTGACACTCTGGTTGGT +
Preference number: 2 (lower is better)
Translates to: FILFLLISSGGLCSASFGFSSDP*LDTLVG
Trigger: ACCAACCAGAGTGTCAAGTCAAGGATCTGAAGAAAA...ACCAAAAGAGGCTGAGCACAAGCCTCCACTACTTATAAGAAGAAATAATATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477187.1
3UTR-3UTR TCA 90 bp TTCTGGTGGAACACAAAACTGCTCTTTTCAATTGTATTTCAGCTGTCTTGTAGGGGTTTCCCTTTTCACTaGATTGCTATAACCAAACCT +
Preference number: 2 (lower is better)
Translates to: FWWNTKLLFSIVFQLSCRGFPFH*IAITKP
Trigger: AGGTTTGGTTATAGCAATTCAGTGAAAAGGGAAACC...CCTACAAGACAGCTGAAATACAATTGAAAAGAGCAGTTTTGTGTTCCACCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000514652.5
3UTR-3UTR TCA 90 bp TTCTGGTGGAACACAAAACTGCTCTTTTCAATTGTATTTCAGCTGTCTTGTAGGAACTCCATTAAGCTGTaGAGAACCAAAACTCTGAGA +
Preference number: 2 (lower is better)
Translates to: FWWNTKLLFSIVFQLSCRNSIKL*RTKTLR
Trigger: TCTCAGAGTTTTGGTTCTTCACAGCTTAATGGAGTT...CCTACAAGACAGCTGAAATACAATTGAAAAGAGCAGTTTTGTGTTCCACCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514652.5
3UTR-3UTR GCA 90 bp TTCTGGTGGAACACAAAACTGCTCTTTTCAATTGTATTTCAGCTGTCTTGTAGGCTTTTGTTAGGTCAATaGAGGGTTTCCCTTTTCACT +
Preference number: 2 (lower is better)
Translates to: FWWNTKLLFSIVFQLSCRLLLGQ*RVSLFT
Trigger: AGTGAAAAGGGAAACCCTGCATTGACCTAACAAAAG...CCTACAAGACAGCTGAAATACAATTGAAAAGAGCAGTTTTGTGTTCCACCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000514652.5
3UTR-3UTR TCA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAACCACTCTTTTTCTTTTaGAGTTGCATGAAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFEPLFFF*SCMKQP
Trigger: TGGCTGCTTCATGCAACTTCAAAAGAAAAAGAGTGG...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000477187.1
3UTR-3UTR TCA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAATCTTTTGAAGTTGCATaGAGCAGCCACTGTAAAACT +
Preference number: 2 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFESFEVA*SSHCKT
Trigger: AGTTTTACAGTGGCTGCTTCATGCAACTTCAAAAGA...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477187.1
3UTR CCA 72 bp ACCAAGGTAGGACTTTCCACAATTCTTGATTCTCCCTaGTTCCCCTACAGACTGGAGCTGGGCTTCTGGTGG +
Preference number: 3 (lower is better)
Translates to: TKVGLSTILDSP*FPYRLELGFWW
Trigger: CCACCAGAAGCCCAGCTCCAGTCTGTAGGGGAACCAGGGAGAATCAAGAATTGTGGAAAGTCCTACCTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
3UTR TCA 72 bp CTCCTTGCTGACACTGGTTTTGCTGATCCACTCTCCTaGGTGTTAGGCCTGGGAGGAGAATTTGGTTTGCTG +
Preference number: 3 (lower is better)
Translates to: LLADTGFADPLS*VLGLGGEFGLL
Trigger: CAGCAAACCAAATTCTCCTCCCAGGCCTAACACTCAGGAGAGTGGATCAGCAAAACCAGTGTCAGCAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477187.1
3UTR GCA 72 bp ATGGAGATCCCAGAGGAAGGAGCAGGCAGACACCTTTaGTGTCTTGCAACTCTCACTGATGATACCTCTAGG +
Preference number: 3 (lower is better)
Translates to: MEIPEEGAGRHL*CLATLTDDTSR
Trigger: CCTAGAGGTATCATCAGTGAGAGTTGCAAGACAGCAAAGGTGTCTGCCTGCTCCTTCCTCTGGGATCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477187.1
3UTR CCA 72 bp CCACAATTCTTGATTCTCCCTGGTTCCCCTACAGACTaGAGCTGGGCTTCTGGTGGAACACAAAACTGCTCT +
Preference number: 3 (lower is better)
Translates to: PQFLILPGSPTD*SWASGGTQNCS
Trigger: AGAGCAGTTTTGTGTTCCACCAGAAGCCCAGCTCCAGTCTGTAGGGGAACCAGGGAGAATCAAGAATTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514652.5
3UTR TCA 72 bp TGCAGTAAAATTTGGGGGCAATTTAACTGTGGGTGGTaGTTTAACTGTGGGTGGCTTCCCAGTCTCTGCTGC +
Preference number: 3 (lower is better)
Translates to: CSKIWGQFNCGW*FNCGWLPSLCC
Trigger: GCAGCAGAGACTGGGAAGCCACCCACAGTTAAATCACCACCCACAGTTAAATTGCCCCCAAATTTTACTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477187.1
3UTR-3UTR CAA 90 bp AGGCTTGTGCTCAGCCTCTTTTGGTACTTCCTTGTTTTCTTCAGATCCTTGACTCTGCTGCTGGTTCCATaGAGGTGTTTCTTCTGTGAT +
Preference number: 3 (lower is better)
Translates to: RLVLSLFWYFLVFFRSLTLLLVP*RCFFCD
Trigger: ATCACAGAAGAAACACCTCAATGGAACCAGCAGCAG...AGTCAAGGATCTGAAGAAAACAAGGAAGTACCAAAAGAGGCTGAGCACAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477187.1
3UTR TCA 72 bp GTATTTCAGCTGTCTTGTAGGTCACCTGCTTGTGGCTaGTTGCCATTTTACTCTTCTCTCTGGTTGACTTTG +
Preference number: 3 (lower is better)
Translates to: VFQLSCRSPACG*LPFYSSLWLTL
Trigger: CAAAGTCAACCAGAGAGAAGAGTAAAATGGCAATCAGCCACAAGCAGGTGACCTACAAGACAGCTGAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
3UTR CCA 72 bp TCCACTCTCCTGAGTGTTAGGCCTGGGAGGAGAATTTaGTTTGCTGAAATATTCTGCAACAGGTATTTTCAT +
Preference number: 3 (lower is better)
Translates to: STLLSVRPGRRI*FAEIFCNRYFH
Trigger: ATGAAAATACCTGTTGCAGAATATTTCAGCAAACCAAATTCTCCTCCCAGGCCTAACACTCAGGAGAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477187.1
3UTR-3UTR CAA 90 bp ATGAAAGAATTCACCCAGTCTAGAACTTCTACCTCCGGTGTGTTGAAGGATAACCTTTGGGGACAGAGGTaGTATTCTTGTATACTCCTT +
Preference number: 3 (lower is better)
Translates to: MKEFTQSRTSTSGVLKDNLWGQR*YSCILL
Trigger: AAGGAGTATACAAGAATACAACCTCTGTCCCCAAAG...GTTATCCTTCAACACACCGGAGGTAGAAGTTCTAGACTGGGTGAATTCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477187.1
3UTR TCA 72 bp TTGCTGGAGTCTAGGGTGACCCCAGTGAGCTCTAATTaGTTATATATCATTCCTGGTATAAAGGGAACTTGT +
Preference number: 3 (lower is better)
Translates to: LLESRVTPVSSN*LYIIPGIKGTC
Trigger: ACAAGTTCCCTTTATACCAGGAATGATATATAATCAATTAGAGCTCACTGGGGTCACCCTAGACTCCAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
3UTR-3UTR CAA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCAAAATGCTACAGAGCTTaGCCAGGATCTCCTATAGGA +
Preference number: 3 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSKCYRA*PGSPIG
Trigger: TCCTATAGGAGATCCTGGCAAAGCTCTGTAGCATTT...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477187.1
3UTR-3UTR CAA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCACTTCAGATCCTTGACTaGACACTCTGGTTGGTTGAT +
Preference number: 3 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSLQILD*TLWLVD
Trigger: ATCAACCAACCAGAGTGTCAAGTCAAGGATCTGAAG...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477187.1
3UTR-3UTR CAA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATCTACCTCCGGTGTGTaGAAGGATAACATGCTCTTT +
Preference number: 3 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSSTSGV*KDNMLF
Trigger: AAAGAGCATGTTATCCTTCAACACACCGGAGGTAGA...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477187.1
3UTR TCA 72 bp CCTTTTGTTAGGTCAATGCAGGGTTTCCCTTTTCACTaGATTGCTATAACCAAACCTATAGTTCCTGTTGTC +
Preference number: 3 (lower is better)
Translates to: PFVRSMQGFPFH*IAITKPIVPVV
Trigger: GACAACAGGAACTATAGGTTTGGTTATAGCAATTCAGTGAAAAGGGAAACCCTGCATTGACCTAACAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514652.5
3UTR-3UTR CAA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCACATAAAGAGGACCACTaGATTCCTCAATACCAAAAA +
Preference number: 3 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSHKEDH*IPQYQK
Trigger: TTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATG...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
3UTR TCA 72 bp TTGTCTCCAGTGAAATTATTTAACTCCATTAAGCTGTaGAGAACCAAAACTCTGAGATCATTGTCCTTTTGT +
Preference number: 3 (lower is better)
Translates to: LSPVKLFNSIKL*RTKTLRSLSFC
Trigger: ACAAAAGGACAATGATCTCAGAGTTTTGGTTCTTCACAGCTTAATGGAGTTAAATAATTTCACTGGAGACAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CCA 90 bp CCTCTAGGTATGGGAAAACTCAAGGCAACCAGGGTCTGGAGCAGACCCCCAGCACTCAGAATGAGGCCGTaGAGGCACTTTGGCACCGTT +
Preference number: 4 (lower is better)
Translates to: PLGMGKLKATRVWSRPPALRMRP*RHFGTV
Trigger: AACGGTGCCAAAGTGCCTCCACGGCCTCATTCTGAG...TGCTGGGGGTCTGCTCCAGACCCTGGTTGCCTTGAGTTTTCCCATACCTAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CCA 90 bp TCCACAATTCTTGATTCTCCCTGGTTCCCCTACAGACTGGAGCTGGGCTTCTGGGGCACCGTTTGGGGCTaGCGACATTCCTCTTACAGG +
Preference number: 4 (lower is better)
Translates to: STILDSPWFPYRLELGFWGTVWG*RHSSYR
Trigger: CCTGTAAGAGGAATGTCGCCAGCCCCAAACGGTGCC...CCAGAAGCCCAGCTCCAGTCTGTAGGGGAACCAGGGAGAATCAAGAATTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR TCA 90 bp CCTCTAGGTATGGGAAAACTCAAGGCAACCAGGGTCTGGAGCAGACCCCCAGCATCGGCAAGCTCAGAATaGATCAAAGCTGAGACCCAC +
Preference number: 4 (lower is better)
Translates to: PLGMGKLKATRVWSRPPASASSE*IKAETH
Trigger: GTGGGTCTCAGCTTTGATTCATTCTGAGCTTGCCGA...TGCTGGGGGTCTGCTCCAGACCCTGGTTGCCTTGAGTTTTCCCATACCTAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CCA 90 bp TGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCATGATCAGGCACTTTGCCGTGGAGGCACTTTaGCACCGTTTGGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: CCPAVLLLKECLSMIRHFAVEAL*HRLGLA
Trigger: CGCCAGCCCCAAACGGTGCCAAAGTGCCTCCACGGC...AAAGTGCCTGATCATGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR TCA 90 bp TCCACAATTCTTGATTCTCCCTGGTTCCCCTACAGACTGGAGCTGGGCTTCTGGGGTACTTGTCATCCCTaGAGAACAGGAGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: STILDSPWFPYRLELGFWGTCHP*RTGARS
Trigger: ACTCCTGGCTCCTGTTCTTCAGGGATGACAAGTACC...CCAGAAGCCCAGCTCCAGTCTGTAGGGGAACCAGGGAGAATCAAGAATTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CCA 90 bp AGGCTTGTGCTCAGCCTCTTTTGGTACTTCCTTGTTTTCTTCAGATCCTTGACTGCCGTGGAGGCACTTTaGCACCGTTTGGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: RLVLSLFWYFLVFFRSLTAVEAL*HRLGLA
Trigger: CGCCAGCCCCAAACGGTGCCAAAGTGCCTCCACGGC...AGTCAAGGATCTGAAGAAAACAAGGAAGTACCAAAAGAGGCTGAGCACAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR TCA 90 bp CCTCTAGGTATGGGAAAACTCAAGGCAACCAGGGTCTGGAGCAGACCCCCAGCATTTTCTTCAGATCCTTaGCTTGACACTCTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: PLGMGKLKATRVWSRPPAFSSDP*LDTLVG
Trigger: ACCAACCAGAGTGTCAAGTCAAGGATCTGAAGAAAA...TGCTGGGGGTCTGCTCCAGACCCTGGTTGCCTTGAGTTTTCCCATACCTAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR GCA 90 bp TGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCATGATCAGGCACTTTAGGGCTCTCCTGGACTaGAGTGCTGGAGGGGTAACT +
Preference number: 4 (lower is better)
Translates to: CCPAVLLLKECLSMIRHFRALLD*SAGGVT
Trigger: AGTTACCCCTCCAGCACTGCAGTCCAGGAGAGCCCT...AAAGTGCCTGATCATGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CCA 90 bp TCCACAATTCTTGATTCTCCCTGGTTCCCCTACAGACTGGAGCTGGGCTTCTGGCTTGACTTGACACTCTaGTTGGTTGATCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: STILDSPWFPYRLELGFWLDLTL*LVDPLL
Trigger: CAGAAGGGGATCAACCAACCAGAGTGTCAAGTCAAG...CCAGAAGCCCAGCTCCAGTCTGTAGGGGAACCAGGGAGAATCAAGAATTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CCA 90 bp TGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCATGATCAGGCACTTTGGTTCCCCTACAGACTaGAGCTGGGCTTCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: CCPAVLLLKECLSMIRHFGSPTD*SWASGG
Trigger: TCCACCAGAAGCCCAGCTCCAGTCTGTAGGGGAACC...AAAGTGCCTGATCATGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR TCA 90 bp AGGCTTGTGCTCAGCCTCTTTTGGTACTTCCTTGTTTTCTTCAGATCCTTGACTCTACTGGGCTCAGAATaGGGCCGTGGAGGCACTTTG +
Preference number: 4 (lower is better)
Translates to: RLVLSLFWYFLVFFRSLTLLGSE*GRGGTL
Trigger: CAAAGTGCCTCCACGGCCTCATTCTGAGCCCAGTAG...AGTCAAGGATCTGAAGAAAACAAGGAAGTACCAAAAGAGGCTGAGCACAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR TCA 90 bp AAACCTATAGTTCCTGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCACTACTGGGCTCAGAATaGGGCCGTGGAGGCACTTTG +
Preference number: 4 (lower is better)
Translates to: KPIVPVVLLSCFSKSVCPLLGSE*GRGGTL
Trigger: CAAAGTGCCTCCACGGCCTCATTCTGAGCCCAGTAG...TGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACAGGAACTATAGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR TCA 90 bp TCCACAATTCTTGATTCTCCCTGGTTCCCCTACAGACTGGAGCTGGGCTTCTGGTTCAGATCCTTGACTTaGCACTCTGGTTGGTTGATC +
Preference number: 4 (lower is better)
Translates to: STILDSPWFPYRLELGFWFRSLT*HSGWLI
Trigger: GATCAACCAACCAGAGTGTCAAGTCAAGGATCTGAA...CCAGAAGCCCAGCTCCAGTCTGTAGGGGAACCAGGGAGAATCAAGAATTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CCA 90 bp TGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCATGATCAGGCACTTTCACTTTGGCACCGTTTaGGGCTGGCGACATTCCTCT +
Preference number: 4 (lower is better)
Translates to: CCPAVLLLKECLSMIRHFHFGTV*GWRHSS
Trigger: AGAGGAATGTCGCCAGCCCCAAACGGTGCCAAAGTG...AAAGTGCCTGATCATGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CCA 90 bp AGCAGCCACTGTAAAACTTCTGCCAGAGAATCAGTATGCAAAATGCTACAGAGCAAGGCAACCAGGGTCTaGAGCAGACCCCCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: SSHCKTSARESVCKMLQSKATRV*SRPPAN
Trigger: GTTTGCTGGGGGTCTGCTCCAGACCCTGGTTGCCTT...GCTCTGTAGCATTTTGCATACTGATTCTCTGGCAGAAGTTTTACAGTGGCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR TCA 90 bp AGGCTTGTGCTCAGCCTCTTTTGGTACTTCCTTGTTTTCTTCAGATCCTTGACTCAGACTCTTCTGGGATaGGGGGTGTGCCTGACTAGA +
Preference number: 4 (lower is better)
Translates to: RLVLSLFWYFLVFFRSLTQTLLG*GVCLTR
Trigger: TCTAGTCAGGCACACCCCTCATCCCAGAAGAGTCTG...AGTCAAGGATCTGAAGAAAACAAGGAAGTACCAAAAGAGGCTGAGCACAAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR TCA 90 bp CCTCTAGGTATGGGAAAACTCAAGGCAACCAGGGTCTGGAGCAGACCCCCAGCAGAGAATTTGGTTTGCTaGAATATTCTGCAACAGGTA +
Preference number: 4 (lower is better)
Translates to: PLGMGKLKATRVWSRPPAENLVC*NILQQV
Trigger: TACCTGTTGCAGAATATTTCAGCAAACCAAATTCTC...TGCTGGGGGTCTGCTCCAGACCCTGGTTGCCTTGAGTTTTCCCATACCTAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CCA 90 bp AACCAAACCTATAGTTCCTGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGCCTGGACTGCAGTGCTaGAGGGGTAACTGCAATTGG +
Preference number: 4 (lower is better)
Translates to: NQTYSSCCPAVLLLKECLPGLQC*RGNCNW
Trigger: CCAATTGCAGTTACCCCTCCAGCACTGCAGTCCAGG...CAGACACTCTTTGAGAAGCAAGACAGCAGGACAACAGGAACTATAGGTTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CCA 90 bp ATGAAAGAATTCACCCAGTCTAGAACTTCTACCTCCGGTGTGTTGAAGGATAACGGCACCGTTTGGGGCTaGCGACATTCCTCTTACAGG +
Preference number: 4 (lower is better)
Translates to: MKEFTQSRTSTSGVLKDNGTVWG*RHSSYR
Trigger: CCTGTAAGAGGAATGTCGCCAGCCCCAAACGGTGCC...GTTATCCTTCAACACACCGGAGGTAGAAGTTCTAGACTGGGTGAATTCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CCA 90 bp AGCAGCCACTGTAAAACTTCTGCCAGAGAATCAGTATGCAAAATGCTACAGAGCCACTTTGGCACCGTTTaGGGCTGGCGACATTCCTCT +
Preference number: 4 (lower is better)
Translates to: SSHCKTSARESVCKMLQSHFGTV*GWRHSS
Trigger: AGAGGAATGTCGCCAGCCCCAAACGGTGCCAAAGTG...GCTCTGTAGCATTTTGCATACTGATTCTCTGGCAGAAGTTTTACAGTGGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCAGCCGTGGAGGCACTTTaGCACCGTTTGGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSAVEAL*HRLGLA
Trigger: CGCCAGCCCCAAACGGTGCCAAAGTGCCTCCACGGC...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CCA 90 bp AACCAAACCTATAGTTCCTGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGCTCAGAATGAGGCCGTaGAGGCACTTTGGCACCGTT +
Preference number: 4 (lower is better)
Translates to: NQTYSSCCPAVLLLKECLLRMRP*RHFGTV
Trigger: AACGGTGCCAAAGTGCCTCCACGGCCTCATTCTGAG...CAGACACTCTTTGAGAAGCAAGACAGCAGGACAACAGGAACTATAGGTTTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514652.5
3UTR CAA 72 bp CTGCCAGAGAATCAGTATGCAAAATGCTACAGAGCTTaGCCAGGATCTCCTATAGGAGCATTCGAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LPENQYAKCYRA*PGSPIGAFEPA
Trigger: TGCTGGCTCGAATGCTCCTATAGGAGATCCTGGCAAAGCTCTGTAGCATTTTGCATACTGATTCTCTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR TCA 90 bp AACCAAACCTATAGTTCCTGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGGCATGCCTTTGGAGGTaGTGGTGGTCTTTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: NQTYSSCCPAVLLLKECLACLWR*WWSFGL
Trigger: AAGGCCAAAAGACCACCATCACCTCCAAAGGCATGC...CAGACACTCTTTGAGAAGCAAGACAGCAGGACAACAGGAACTATAGGTTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR TCA 90 bp GCAGTAAAATTTGGGGGCAATTTAACTGTGGGTGGTGATTTAACTGTGGGTGGCGACACTCTGGTTGGTTaGTCCCCTTCTGTATCTCTG +
Preference number: 4 (lower is better)
Translates to: AVKFGGNLTVGGDLTVGGDTLVG*SPSVSL
Trigger: CAGAGATACAGAAGGGGATCAACCAACCAGAGTGTC...GCCACCCACAGTTAAATCACCACCCACAGTTAAATTGCCCCCAAATTTTACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR TCA 90 bp TGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCATGATCAGGCACTTTGACACTCTGGTTGGTTaGTCCCCTTCTGTATCTCTG +
Preference number: 4 (lower is better)
Translates to: CCPAVLLLKECLSMIRHFDTLVG*SPSVSL
Trigger: CAGAGATACAGAAGGGGATCAACCAACCAGAGTGTC...AAAGTGCCTGATCATGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR TCA 90 bp TCCACAATTCTTGATTCTCCCTGGTTCCCCTACAGACTGGAGCTGGGCTTCTGGGGTTTCCCTTTTCACTaGATTGCTATAACCAAACCT +
Preference number: 4 (lower is better)
Translates to: STILDSPWFPYRLELGFWGFPFH*IAITKP
Trigger: AGGTTTGGTTATAGCAATTCAGTGAAAAGGGAAACC...CCAGAAGCCCAGCTCCAGTCTGTAGGGGAACCAGGGAGAATCAAGAATTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR TCA 90 bp TCCACAATTCTTGATTCTCCCTGGTTCCCCTACAGACTGGAGCTGGGCTTCTGGAACTCCATTAAGCTGTaGAGAACCAAAACTCTGAGA +
Preference number: 4 (lower is better)
Translates to: STILDSPWFPYRLELGFWNSIKL*RTKTLR
Trigger: TCTCAGAGTTTTGGTTCTTCACAGCTTAATGGAGTT...CCAGAAGCCCAGCTCCAGTCTGTAGGGGAACCAGGGAGAATCAAGAATTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR GCA 90 bp AGCAGCCACTGTAAAACTTCTGCCAGAGAATCAGTATGCAAAATGCTACAGAGCTCTCCTGGACTGCAGTaGTGGAGGGGTAACTGCAAT +
Preference number: 4 (lower is better)
Translates to: SSHCKTSARESVCKMLQSSPGLQ*WRGNCN
Trigger: ATTGCAGTTACCCCTCCAGCACTGCAGTCCAGGAGA...GCTCTGTAGCATTTTGCATACTGATTCTCTGGCAGAAGTTTTACAGTGGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR GCA 90 bp TCCACAATTCTTGATTCTCCCTGGTTCCCCTACAGACTGGAGCTGGGCTTCTGGAATCAGTATGCAAAATaGTACAGAGCTTTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: STILDSPWFPYRLELGFWNQYAK*YRALPG
Trigger: TCCTGGCAAAGCTCTGTAGCATTTTGCATACTGATT...CCAGAAGCCCAGCTCCAGTCTGTAGGGGAACCAGGGAGAATCAAGAATTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR TCA 90 bp GTCAATGCAGGGTTTCCCTTTTCACTGAATTGCTATAACCAAACCTATAGTTCCCAGACTCTTCTGGGATaGGGGGTGTGCCTGACTAGA +
Preference number: 4 (lower is better)
Translates to: VNAGFPFSLNCYNQTYSSQTLLG*GVCLTR
Trigger: TCTAGTCAGGCACACCCCTCATCCCAGAAGAGTCTG...GGAACTATAGGTTTGGTTATAGCAATTCAGTGAAAAGGGAAACCCTGCATTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR TCA 90 bp GAAGCAGCCACTGTAAAACTTCTGCCAGAGAATCAGTATGCAAAATGCTACAGAGCATGCCTTTGGAGGTaGTGGTGGTCTTTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: EAATVKLLPENQYAKCYRACLWR*WWSFGL
Trigger: AAGGCCAAAAGACCACCATCACCTCCAAAGGCATGC...TCTGTAGCATTTTGCATACTGATTCTCTGGCAGAAGTTTTACAGTGGCTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR TCA 90 bp GAAGCAGCCACTGTAAAACTTCTGCCAGAGAATCAGTATGCAAAATGCTACAGAGGTACTTGTCATCCCTaGAGAACAGGAGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: EAATVKLLPENQYAKCYRGTCHP*RTGARS
Trigger: ACTCCTGGCTCCTGTTCTTCAGGGATGACAAGTACC...TCTGTAGCATTTTGCATACTGATTCTCTGGCAGAAGTTTTACAGTGGCTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR GCA 90 bp AAACCTATAGTTCCTGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCACCTCACTTCCAGATGTaGTCAGACCCTGAGGACAAT +
Preference number: 4 (lower is better)
Translates to: KPIVPVVLLSCFSKSVCPPHFQM*SDPEDN
Trigger: ATTGTCCTCAGGGTCTGAGCACATCTGGAAGTGAGG...TGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACAGGAACTATAGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514652.5
3UTR CAA 72 bp CTCTTTGGGGACAGAGGTTGTATTCTTGTATACTCCTaGCTGACACTGGTTTTGCTGATCCACTCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: LFGDRGCILVYS*LTLVLLIHSPE
Trigger: CTCAGGAGAGTGGATCAGCAAAACCAGTGTCAGCAAGGAGTATACAAGAATACAACCTCTGTCCCCAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR TCA 90 bp GCAGTAAAATTTGGGGGCAATTTAACTGTGGGTGGTGATTTAACTGTGGGTGGCTGTTATTCAAGCCTTTaGTGTGGCAGACTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: AVKFGGNLTVGGDLTVGGCYSSL*CGRLFW
Trigger: CCAGAAGAGTCTGCCACATCAAAGGCTTGAATAACA...GCCACCCACAGTTAAATCACCACCCACAGTTAAATTGCCCCCAAATTTTACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR TCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCACTACTGGGCTCAGAATaGGGCCGTGGAGGCACTTTG +
Preference number: 4 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSLLGSE*GRGGTL
Trigger: CAAAGTGCCTCCACGGCCTCATTCTGAGCCCAGTAG...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR TCA 90 bp AAACCTATAGTTCCTGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCATGCTGCTGGTTCCATTaGGGTGTTTCTTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: KPIVPVVLLSCFSKSVCPCCWFH*GVSSVM
Trigger: CATCACAGAAGAAACACCTCAATGGAACCAGCAGCA...TGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACAGGAACTATAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR TCA 90 bp TGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCATGATCAGGCACTTTTTTAACTGTGGGTGGTaGTTTAACTGTGGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: CCPAVLLLKECLSMIRHFFNCGW*FNCGWL
Trigger: AAGCCACCCACAGTTAAATCACCACCCACAGTTAAA...AAAGTGCCTGATCATGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR TCA 90 bp TTCATATTATTTCTTCTTATAAGTAGTGGAGGCTTGTGCTCAGCCTCTTTTGGTGCTGATCCACTCTCCTaGGTGTTAGGCCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: FILFLLISSGGLCSASFGADPLS*VLGLGG
Trigger: TCCTCCCAGGCCTAACACTCAGGAGAGTGGATCAGC...ACCAAAAGAGGCTGAGCACAAGCCTCCACTACTTATAAGAAGAAATAATATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR TCA 90 bp TGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCATGATCAGGCACTTTTCACCTGCTTGTGGCTaGTTGCCATTTTACTCTTCT +
Preference number: 4 (lower is better)
Translates to: CCPAVLLLKECLSMIRHFSPACG*LPFYSS
Trigger: AGAAGAGTAAAATGGCAATCAGCCACAAGCAGGTGA...AAAGTGCCTGATCATGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR GCA 90 bp AAACCTATAGTTCCTGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCATGCTGGAGGGGTAACTaGAATTGGCAAATGGTATCC +
Preference number: 4 (lower is better)
Translates to: KPIVPVVLLSCFSKSVCPCWRGN*NWQMVS
Trigger: GGATACCATTTGCCAATTGCAGTTACCCCTCCAGCA...TGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACAGGAACTATAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR GCA 90 bp GTCAATGCAGGGTTTCCCTTTTCACTGAATTGCTATAACCAAACCTATAGTTCCTCTCCTGGACTGCAGTaGTGGAGGGGTAACTGCAAT +
Preference number: 4 (lower is better)
Translates to: VNAGFPFSLNCYNQTYSSSPGLQ*WRGNCN
Trigger: ATTGCAGTTACCCCTCCAGCACTGCAGTCCAGGAGA...GGAACTATAGGTTTGGTTATAGCAATTCAGTGAAAAGGGAAACCCTGCATTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR GCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCAAGGGCTCTCCTGGACTaGAGTGCTGGAGGGGTAACT +
Preference number: 4 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSRALLD*SAGGVT
Trigger: AGTTACCCCTCCAGCACTGCAGTCCAGGAGAGCCCT...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR GCA 90 bp TCCACAATTCTTGATTCTCCCTGGTTCCCCTACAGACTGGAGCTGGGCTTCTGGTATGCAAATGGTGTTTaGTTTCACATCATTCTTGGT +
Preference number: 4 (lower is better)
Translates to: STILDSPWFPYRLELGFWYANGV*FHIILG
Trigger: ACCAAGAATGATGTGAAAGCAAACACCATTTGCATA...CCAGAAGCCCAGCTCCAGTCTGTAGGGGAACCAGGGAGAATCAAGAATTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCAGGCACCGTTTGGGGCTaGCGACATTCCTCTTACAGG +
Preference number: 4 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSGTVWG*RHSSYR
Trigger: CCTGTAAGAGGAATGTCGCCAGCCCCAAACGGTGCC...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CCA 90 bp TCCACAATTCTTGATTCTCCCTGGTTCCCCTACAGACTGGAGCTGGGCTTCTGGAGTTTGGTATGCAAATaGTGTTTGCTTTCACATCAT +
Preference number: 4 (lower is better)
Translates to: STILDSPWFPYRLELGFWSLVCK*CLLSHH
Trigger: ATGATGTGAAAGCAAACACCATTTGCATACCAAACT...CCAGAAGCCCAGCTCCAGTCTGTAGGGGAACCAGGGAGAATCAAGAATTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR TCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCACAGACTCTTCTGGGATaGGGGGTGTGCCTGACTAGA +
Preference number: 4 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSQTLLG*GVCLTR
Trigger: TCTAGTCAGGCACACCCCTCATCCCAGAAGAGTCTG...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR TCA 90 bp GTCAATGCAGGGTTTCCCTTTTCACTGAATTGCTATAACCAAACCTATAGTTCCTCGGCAAGCTCAGAATaGATCAAAGCTGAGACCCAC +
Preference number: 4 (lower is better)
Translates to: VNAGFPFSLNCYNQTYSSSASSE*IKAETH
Trigger: GTGGGTCTCAGCTTTGATTCATTCTGAGCTTGCCGA...GGAACTATAGGTTTGGTTATAGCAATTCAGTGAAAAGGGAAACCCTGCATTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR TCA 90 bp AGCAGCCACTGTAAAACTTCTGCCAGAGAATCAGTATGCAAAATGCTACAGAGCTTTAACTGTGGGTGGTaGTTTAACTGTGGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: SSHCKTSARESVCKMLQSFNCGW*FNCGWL
Trigger: AAGCCACCCACAGTTAAATCACCACCCACAGTTAAA...GCTCTGTAGCATTTTGCATACTGATTCTCTGGCAGAAGTTTTACAGTGGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR TCA 90 bp TGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCATGATCAGGCACTTTTTTTCTTCAGATCCTTaGCTTGACACTCTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: CCPAVLLLKECLSMIRHFFSSDP*LDTLVG
Trigger: ACCAACCAGAGTGTCAAGTCAAGGATCTGAAGAAAA...AAAGTGCCTGATCATGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACA
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR TCA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAAGCTGATCCACTCTCCTaGGTGTTAGGCCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFEADPLS*VLGLGG
Trigger: TCCTCCCAGGCCTAACACTCAGGAGAGTGGATCAGC...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR TCA 90 bp AATCAGTATGCAAAATGCTACAGAGCTTTGCCAGGATCTCCTATAGGAGCATTCCTACCTCCGGTGTGTTaGAGGATAACATGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: NQYAKCYRALPGSPIGAFLPPVC*RITCSL
Trigger: CAAAGAGCATGTTATCCTTCAACACACCGGAGGTAG...GAATGCTCCTATAGGAGATCCTGGCAAAGCTCTGTAGCATTTTGCATACTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR GCA 90 bp AATCAGTATGCAAAATGCTACAGAGCTTTGCCAGGATCTCCTATAGGAGCATTCTGCTGGAGGGGTAACTaGAATTGGCAAATGGTATCC +
Preference number: 4 (lower is better)
Translates to: NQYAKCYRALPGSPIGAFCWRGN*NWQMVS
Trigger: GGATACCATTTGCCAATTGCAGTTACCCCTCCAGCA...GAATGCTCCTATAGGAGATCCTGGCAAAGCTCTGTAGCATTTTGCATACTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR GCA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAAAGGGCTCTCCTGGACTaGAGTGCTGGAGGGGTAACT +
Preference number: 4 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFERALLD*SAGGVT
Trigger: AGTTACCCCTCCAGCACTGCAGTCCAGGAGAGCCCT...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCACCTGGACTGCAGTGCTaGAGGGGTAACTGCAATTGG +
Preference number: 4 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSPGLQC*RGNCNW
Trigger: CCAATTGCAGTTACCCCTCCAGCACTGCAGTCCAGG...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCACTCAGAATGAGGCCGTaGAGGCACTTTGGCACCGTT +
Preference number: 4 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSLRMRP*RHFGTV
Trigger: AACGGTGCCAAAGTGCCTCCACGGCCTCATTCTGAG...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CCA 90 bp AAACCTATAGTTCCTGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCAGCCTGTGTGGCTCCCTaGTTGTTAAGATATGTTACA +
Preference number: 4 (lower is better)
Translates to: KPIVPVVLLSCFSKSVCPACVAP*LLRYVT
Trigger: TGTAACATATCTTAACAACCAGGGAGCCACACAGGC...TGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACAGGAACTATAGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514652.5
3UTR CAA 72 bp TATAACCAAACCTATAGTTCCTGTTGTCCTGCTGTCTaGCTTCTCAAAGAGTGTCTGTCCATGATCAGGCAC +
Preference number: 4 (lower is better)
Translates to: YNQTYSSCCPAV*LLKECLSMIRH
Trigger: GTGCCTGATCATGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACAGGAACTATAGGTTTGGTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR TCA 90 bp AGGCTTGTGCTCAGCCTCTTTTGGTACTTCCTTGTTTTCTTCAGATCCTTGACTTTTTGGGGTCTAACTTaGTTGACCTCACTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: RLVLSLFWYFLVFFRSLTFWGLT*LTSLPD
Trigger: ATCTGGAAGTGAGGTCAATCAAGTTAGACCCCAAAA...AGTCAAGGATCTGAAGAAAACAAGGAAGTACCAAAAGAGGCTGAGCACAAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR TCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCAGGTACTTGTCATCCCTaGAGAACAGGAGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSGTCHP*RTGARS
Trigger: ACTCCTGGCTCCTGTTCTTCAGGGATGACAAGTACC...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR TCA 90 bp TGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCATGATCAGGCACTTTTCTTTTGAAGTTGCATaGAGCAGCCACTGTAAAACT +
Preference number: 4 (lower is better)
Translates to: CCPAVLLLKECLSMIRHFSFEVA*SSHCKT
Trigger: AGTTTTACAGTGGCTGCTTCATGCAACTTCAAAAGA...AAAGTGCCTGATCATGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR TCA 90 bp AGGCTTGTGCTCAGCCTCTTTTGGTACTTCCTTGTTTTCTTCAGATCCTTGACTCCACTCTTTTTCTTTTaGAGTTGCATGAAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: RLVLSLFWYFLVFFRSLTPLFFF*SCMKQP
Trigger: TGGCTGCTTCATGCAACTTCAAAAGAAAAAGAGTGG...AGTCAAGGATCTGAAGAAAACAAGGAAGTACCAAAAGAGGCTGAGCACAAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR GCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATCTCCTGGACTGCAGTaGTGGAGGGGTAACTGCAAT +
Preference number: 4 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSSPGLQ*WRGNCN
Trigger: ATTGCAGTTACCCCTCCAGCACTGCAGTCCAGGAGA...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR GCA 90 bp TGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCATGATCAGGCACTTTCTTTTGTTAGGTCAATaGAGGGTTTCCCTTTTCACT +
Preference number: 4 (lower is better)
Translates to: CCPAVLLLKECLSMIRHFLLLGQ*RVSLFT
Trigger: AGTGAAAAGGGAAACCCTGCATTGACCTAACAAAAG...AAAGTGCCTGATCATGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CCA 90 bp GAAGCAGCCACTGTAAAACTTCTGCCAGAGAATCAGTATGCAAAATGCTACAGATTTCTAGCCATAATATaGCTGCCTTTGCCCTCGATC +
Preference number: 4 (lower is better)
Translates to: EAATVKLLPENQYAKCYRFLAII*LPLPSI
Trigger: GATCGAGGGCAAAGGCAGCCATATTATGGCTAGAAA...TCTGTAGCATTTTGCATACTGATTCTCTGGCAGAAGTTTTACAGTGGCTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CCA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAACCTGGACTGCAGTGCTaGAGGGGTAACTGCAATTGG +
Preference number: 4 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFEPGLQC*RGNCNW
Trigger: CCAATTGCAGTTACCCCTCCAGCACTGCAGTCCAGG...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CCA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAACACTTTGGCACCGTTTaGGGCTGGCGACATTCCTCT +
Preference number: 4 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFEHFGTV*GWRHSS
Trigger: AGAGGAATGTCGCCAGCCCCAAACGGTGCCAAAGTG...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CCA 90 bp GCAGTAAAATTTGGGGGCAATTTAACTGTGGGTGGTGATTTAACTGTGGGTGGCCTGATCCAGATAGTTTaGTATGCAAATGGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: AVKFGGNLTVGGDLTVGGLIQIV*YANGVC
Trigger: GCAAACACCATTTGCATACCAAACTATCTGGATCAG...GCCACCCACAGTTAAATCACCACCCACAGTTAAATTGCCCCCAAATTTTACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CCA 90 bp TGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCATGATCAGGCACTTTCTGATCCAGATAGTTTaGTATGCAAATGGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: CCPAVLLLKECLSMIRHFLIQIV*YANGVC
Trigger: GCAAACACCATTTGCATACCAAACTATCTGGATCAG...AAAGTGCCTGATCATGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CCA 90 bp ATGAAAGAATTCACCCAGTCTAGAACTTCTACCTCCGGTGTGTTGAAGGATAACGCCTGTGTGGCTCCCTaGTTGTTAAGATATGTTACA +
Preference number: 4 (lower is better)
Translates to: MKEFTQSRTSTSGVLKDNACVAP*LLRYVT
Trigger: TGTAACATATCTTAACAACCAGGGAGCCACACAGGC...GTTATCCTTCAACACACCGGAGGTAGAAGTTCTAGACTGGGTGAATTCTTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CCA 90 bp TGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCATGATCAGGCACTTTCCTATAAGGATACTTTaGGCTATTTTGGACCAAGGT +
Preference number: 4 (lower is better)
Translates to: CCPAVLLLKECLSMIRHFPIRIL*AILDQG
Trigger: ACCTTGGTCCAAAATAGCCCAAAGTATCCTTATAGG...AAAGTGCCTGATCATGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CCA 90 bp AACCAAACCTATAGTTCCTGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGACAATAGGCTGTCCTTaGAGTCTAAGTAAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: NQTYSSCCPAVLLLKECLTIGCP*SLSKGV
Trigger: TACTCCCTTACTTAGACTCCAAGGACAGCCTATTGT...CAGACACTCTTTGAGAAGCAAGACAGCAGGACAACAGGAACTATAGGTTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR TCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCAGATGAGGGGTGTGCCTaGCTAGAAAGCAGCTTACAT +
Preference number: 4 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSDEGCA*LESSLH
Trigger: ATGTAAGCTGCTTTCTAGTCAGGCACACCCCTCATC...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR TCA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAAGCATGCCTTTGGAGGTaGTGGTGGTCTTTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFEACLWR*WWSFGL
Trigger: AAGGCCAAAAGACCACCATCACCTCCAAAGGCATGC...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR TCA 90 bp GAGGCTTGTGCTCAGCCTCTTTTGGTACTTCCTTGTTTTCTTCAGATCCTTGACAGAATGAATCAAAGCTaGGACCCACTCTTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: EACAQPLLVLPCFLQILDRMNQS*DPLFFF
Trigger: AAAGAAAAAGAGTGGGTCTCAGCTTTGATTCATTCT...GTCAAGGATCTGAAGAAAACAAGGAAGTACCAAAAGAGGCTGAGCACAAGCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR TCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATCGGCAAGCTCAGAATaGATCAAAGCTGAGACCCAC +
Preference number: 4 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSSASSE*IKAETH
Trigger: GTGGGTCTCAGCTTTGATTCATTCTGAGCTTGCCGA...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR TCA 90 bp TGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCATGATCAGGCACTTTGAAGAACCAAAACTCTaGGATCATTGTCCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: CCPAVLLLKECLSMIRHFEEPKL*DHCPFV
Trigger: AACAAAAGGACAATGATCTCAGAGTTTTGGTTCTTC...AAAGTGCCTGATCATGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR GCA 90 bp GAGGCTTGTGCTCAGCCTCTTTTGGTACTTCCTTGTTTTCTTCAGATCCTTGACCCAGATAGTTTGGTATaGAAATGGTGTTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: EACAQPLLVLPCFLQILDPDSLV*KWCLLS
Trigger: TGAAAGCAAACACCATTTGCATACCAAACTATCTGG...GTCAAGGATCTGAAGAAAACAAGGAAGTACCAAAAGAGGCTGAGCACAAGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CCA 90 bp GTCAATGCAGGGTTTCCCTTTTCACTGAATTGCTATAACCAAACCTATAGTTCCTTTCTAGCCATAATATaGCTGCCTTTGCCCTCGATC +
Preference number: 4 (lower is better)
Translates to: VNAGFPFSLNCYNQTYSSFLAII*LPLPSI
Trigger: GATCGAGGGCAAAGGCAGCCATATTATGGCTAGAAA...GGAACTATAGGTTTGGTTATAGCAATTCAGTGAAAAGGGAAACCCTGCATTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CCA 90 bp ATGAAAGAATTCACCCAGTCTAGAACTTCTACCTCCGGTGTGTTGAAGGATAACAGGGGTAACTGCAATTaGCAAATGGTATCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: MKEFTQSRTSTSGVLKDNRGNCN*QMVSCS
Trigger: AGAACAGGATACCATTTGCCAATTGCAGTTACCCCT...GTTATCCTTCAACACACCGGAGGTAGAAGTTCTAGACTGGGTGAATTCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CCA 90 bp GAAGCAGCCACTGTAAAACTTCTGCCAGAGAATCAGTATGCAAAATGCTACAGACCTGGGAGGAGAATTTaGTTTGCTGAAATATTCTGC +
Preference number: 4 (lower is better)
Translates to: EAATVKLLPENQYAKCYRPGRRI*FAEIFC
Trigger: GCAGAATATTTCAGCAAACCAAATTCTCCTCCCAGG...TCTGTAGCATTTTGCATACTGATTCTCTGGCAGAAGTTTTACAGTGGCTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CCA 90 bp TTCTGGTGGAACACAAAACTGCTCTTTTCAATTGTATTTCAGCTGTCTTGTAGGGAGCTGGGCTTCTGGTaGAACACAAAACTGCTCTTT +
Preference number: 4 (lower is better)
Translates to: FWWNTKLLFSIVFQLSCRELGFW*NTKLLF
Trigger: AAAGAGCAGTTTTGTGTTCCACCAGAAGCCCAGCTC...CCTACAAGACAGCTGAAATACAATTGAAAAGAGCAGTTTTGTGTTCCACCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR TCA 90 bp GTCAATGCAGGGTTTCCCTTTTCACTGAATTGCTATAACCAAACCTATAGTTCCTTTTGGGGTCTAACTTaGTTGACCTCACTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: VNAGFPFSLNCYNQTYSSFWGLT*LTSLPD
Trigger: ATCTGGAAGTGAGGTCAATCAAGTTAGACCCCAAAA...GGAACTATAGGTTTGGTTATAGCAATTCAGTGAAAAGGGAAACCCTGCATTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR TCA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAAGATGAGGGGTGTGCCTaGCTAGAAAGCAGCTTACAT +
Preference number: 4 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFEDEGCA*LESSLH
Trigger: ATGTAAGCTGCTTTCTAGTCAGGCACACCCCTCATC...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR TCA 90 bp TTCTGGTGGAACACAAAACTGCTCTTTTCAATTGTATTTCAGCTGTCTTGTAGGTGTTATTCAAGCCTTTaGTGTGGCAGACTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: FWWNTKLLFSIVFQLSCRCYSSL*CGRLFW
Trigger: CCAGAAGAGTCTGCCACATCAAAGGCTTGAATAACA...CCTACAAGACAGCTGAAATACAATTGAAAAGAGCAGTTTTGTGTTCCACCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR TCA 90 bp AATCAGTATGCAAAATGCTACAGAGCTTTGCCAGGATCTCCTATAGGAGCATTCTCTTTTGAAGTTGCATaGAGCAGCCACTGTAAAACT +
Preference number: 4 (lower is better)
Translates to: NQYAKCYRALPGSPIGAFSFEVA*SSHCKT
Trigger: AGTTTTACAGTGGCTGCTTCATGCAACTTCAAAAGA...GAATGCTCCTATAGGAGATCCTGGCAAAGCTCTGTAGCATTTTGCATACTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR TCA 90 bp GTCAATGCAGGGTTTCCCTTTTCACTGAATTGCTATAACCAAACCTATAGTTCCCCACTCTTTTTCTTTTaGAGTTGCATGAAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VNAGFPFSLNCYNQTYSSPLFFF*SCMKQP
Trigger: TGGCTGCTTCATGCAACTTCAAAAGAAAAAGAGTGG...GGAACTATAGGTTTGGTTATAGCAATTCAGTGAAAAGGGAAACCCTGCATTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR TCA 90 bp AACCAAACCTATAGTTCCTGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGAGAATGAATCAAAGCTaGGACCCACTCTTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: NQTYSSCCPAVLLLKECLRMNQS*DPLFFF
Trigger: AAAGAAAAAGAGTGGGTCTCAGCTTTGATTCATTCT...CAGACACTCTTTGAGAAGCAAGACAGCAGGACAACAGGAACTATAGGTTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR TCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATGCTGCTGGTTCCATTaGGGTGTTTCTTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSCCWFH*GVSSVM
Trigger: CATCACAGAAGAAACACCTCAATGGAACCAGCAGCA...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR TCA 90 bp GTCAATGCAGGGTTTCCCTTTTCACTGAATTGCTATAACCAAACCTATAGTTCCAAACCATCACTGTCATaGTGTTATAGTCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: VNAGFPFSLNCYNQTYSSKPSLS*CYSPRM
Trigger: CATCCTGGGACTATAACATCATGACAGTGATGGTTT...GGAACTATAGGTTTGGTTATAGCAATTCAGTGAAAAGGGAAACCCTGCATTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR GCA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAACCTCACTTCCAGATGTaGTCAGACCCTGAGGACAAT +
Preference number: 4 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFEPHFQM*SDPEDN
Trigger: ATTGTCCTCAGGGTCTGAGCACATCTGGAAGTGAGG...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR GCA 90 bp AACCAAACCTATAGTTCCTGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGCCAGATAGTTTGGTATaGAAATGGTGTTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: NQTYSSCCPAVLLLKECLPDSLV*KWCLLS
Trigger: TGAAAGCAAACACCATTTGCATACCAAACTATCTGG...CAGACACTCTTTGAGAAGCAAGACAGCAGGACAACAGGAACTATAGGTTTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR GCA 90 bp GAAGCAGCCACTGTAAAACTTCTGCCAGAGAATCAGTATGCAAAATGCTACAGAAATCAGTATGCAAAATaGTACAGAGCTTTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: EAATVKLLPENQYAKCYRNQYAK*YRALPG
Trigger: TCCTGGCAAAGCTCTGTAGCATTTTGCATACTGATT...TCTGTAGCATTTTGCATACTGATTCTCTGGCAGAAGTTTTACAGTGGCTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR GCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCAAGTAGTGGAGGCTTGTaGTCAGCCTCTTTTGGTACT +
Preference number: 4 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSSSGGL*SASFGT
Trigger: AGTACCAAAAGAGGCTGAGCACAAGCCTCCACTACT...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR GCA 90 bp TTCTGGTGGAACACAAAACTGCTCTTTTCAATTGTATTTCAGCTGTCTTGTAGGGTTGTCCTGCTGTCTTaGTTCTCAAAGAGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: FWWNTKLLFSIVFQLSCRVVLLS*FSKSVC
Trigger: ACAGACACTCTTTGAGAAGCAAGACAGCAGGACAAC...CCTACAAGACAGCTGAAATACAATTGAAAAGAGCAGTTTTGTGTTCCACCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR GCA 90 bp AAACCTATAGTTCCTGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCAACACTTCATAGTTGTTaGTCTGTAGTCATGAATGCT +
Preference number: 4 (lower is better)
Translates to: KPIVPVVLLSCFSKSVCPTLHSC*SVVMNA
Trigger: AGCATTCATGACTACAGAGCAACAACTATGAAGTGT...TGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACAGGAACTATAGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCACTTGACTTGACACTCTaGTTGGTTGATCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSLDLTL*LVDPLL
Trigger: CAGAAGGGGATCAACCAACCAGAGTGTCAAGTCAAG...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CCA 90 bp GTCAATGCAGGGTTTCCCTTTTCACTGAATTGCTATAACCAAACCTATAGTTCCTACTTTGGGCTATTTTaGACCAAGGTAGGACTTTCC +
Preference number: 4 (lower is better)
Translates to: VNAGFPFSLNCYNQTYSSYFGLF*TKVGLS
Trigger: GGAAAGTCCTACCTTGGTCCAAAATAGCCCAAAGTA...GGAACTATAGGTTTGGTTATAGCAATTCAGTGAAAAGGGAAACCCTGCATTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR TCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATGTTATTCAAGCCTTTaGTGTGGCAGACTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSCYSSL*CGRLFW
Trigger: CCAGAAGAGTCTGCCACATCAAAGGCTTGAATAACA...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR TCA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAATGCTGCTGGTTCCATTaGGGTGTTTCTTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFECCWFH*GVSSVM
Trigger: CATCACAGAAGAAACACCTCAATGGAACCAGCAGCA...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR TCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTCAGATCCTTGACTTaGCACTCTGGTTGGTTGATC +
Preference number: 4 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSFRSLT*HSGWLI
Trigger: GATCAACCAACCAGAGTGTCAAGTCAAGGATCTGAA...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR TCA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAACTACCTCCGGTGTGTTaGAGGATAACATGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFELPPVC*RITCSL
Trigger: CAAAGAGCATGTTATCCTTCAACACACCGGAGGTAG...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR GCA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAATGCTGGAGGGGTAACTaGAATTGGCAAATGGTATCC +
Preference number: 4 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFECWRGN*NWQMVS
Trigger: GGATACCATTTGCCAATTGCAGTTACCCCTCCAGCA...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR GCA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAAAGTAGTGGAGGCTTGTaGTCAGCCTCTTTTGGTACT +
Preference number: 4 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFESSGGL*SASFGT
Trigger: AGTACCAAAAGAGGCTGAGCACAAGCCTCCACTACT...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTCTAGCCATAATATaGCTGCCTTTGCCCTCGATC +
Preference number: 4 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSFLAII*LPLPSI
Trigger: GATCGAGGGCAAAGGCAGCCATATTATGGCTAGAAA...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CCA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAACTTGACTTGACACTCTaGTTGGTTGATCCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFELDLTL*LVDPLL
Trigger: CAGAAGGGGATCAACCAACCAGAGTGTCAAGTCAAG...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR TCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTTGGGGTCTAACTTaGTTGACCTCACTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSFWGLT*LTSLPD
Trigger: ATCTGGAAGTGAGGTCAATCAAGTTAGACCCCAAAA...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR TCA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAATTCAGATCCTTGACTTaGCACTCTGGTTGGTTGATC +
Preference number: 4 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFEFRSLT*HSGWLI
Trigger: GATCAACCAACCAGAGTGTCAAGTCAAGGATCTGAA...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR TCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTTCTTCAGATCCTTaGCTTGACACTCTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSFSSDP*LDTLVG
Trigger: ACCAACCAGAGTGTCAAGTCAAGGATCTGAAGAAAA...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR TCA 90 bp GTCAATGCAGGGTTTCCCTTTTCACTGAATTGCTATAACCAAACCTATAGTTCCCCAGTGAGCTCTAATTaGTTATATATCATTCCTGGT +
Preference number: 4 (lower is better)
Translates to: VNAGFPFSLNCYNQTYSSPVSSN*LYIIPG
Trigger: ACCAGGAATGATATATAATCAATTAGAGCTCACTGG...GGAACTATAGGTTTGGTTATAGCAATTCAGTGAAAAGGGAAACCCTGCATTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR GCA 90 bp AATCAGTATGCAAAATGCTACAGAGCTTTGCCAGGATCTCCTATAGGAGCATTCTATGCAAATGGTGTTTaGTTTCACATCATTCTTGGT +
Preference number: 4 (lower is better)
Translates to: NQYAKCYRALPGSPIGAFYANGV*FHIILG
Trigger: ACCAAGAATGATGTGAAAGCAAACACCATTTGCATA...GAATGCTCCTATAGGAGATCCTGGCAAAGCTCTGTAGCATTTTGCATACTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCAAGGGGTAACTGCAATTaGCAAATGGTATCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSRGNCN*QMVSCS
Trigger: AGAACAGGATACCATTTGCCAATTGCAGTTACCCCT...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CCA 90 bp AATCAGTATGCAAAATGCTACAGAGCTTTGCCAGGATCTCCTATAGGAGCATTCAGTTTGGTATGCAAATaGTGTTTGCTTTCACATCAT +
Preference number: 4 (lower is better)
Translates to: NQYAKCYRALPGSPIGAFSLVCK*CLLSHH
Trigger: ATGATGTGAAAGCAAACACCATTTGCATACCAAACT...GAATGCTCCTATAGGAGATCCTGGCAAAGCTCTGTAGCATTTTGCATACTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCAAGCCCTACAGAAGAGTaGCTTTTATTTCCTGATCCA +
Preference number: 4 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSSPTEE*LLFPDP
Trigger: TGGATCAGGAAATAAAAGCCACTCTTCTGTAGGGCT...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR TCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATCTTTTGAAGTTGCATaGAGCAGCCACTGTAAAACT +
Preference number: 4 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSSFEVA*SSHCKT
Trigger: AGTTTTACAGTGGCTGCTTCATGCAACTTCAAAAGA...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR GCA 90 bp GTCAATGCAGGGTTTCCCTTTTCACTGAATTGCTATAACCAAACCTATAGTTCCGGTGGAACACAAAACTaGTCTTTTCAATTGTATTTC +
Preference number: 4 (lower is better)
Translates to: VNAGFPFSLNCYNQTYSSGGTQN*SFQLYF
Trigger: GAAATACAATTGAAAAGAGCAGTTTTGTGTTCCACC...GGAACTATAGGTTTGGTTATAGCAATTCAGTGAAAAGGGAAACCCTGCATTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CCA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAACCTGGGAGGAGAATTTaGTTTGCTGAAATATTCTGC +
Preference number: 4 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFEPGRRI*FAEIFC
Trigger: GCAGAATATTTCAGCAAACCAAATTCTCCTCCCAGG...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR TCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCAGAGAATTTGGTTTGCTaGAATATTCTGCAACAGGTA +
Preference number: 4 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSENLVC*NILQQV
Trigger: TACCTGTTGCAGAATATTTCAGCAAACCAAATTCTC...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR GCA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAAAATCAGTATGCAAAATaGTACAGAGCTTTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFENQYAK*YRALPG
Trigger: TCCTGGCAAAGCTCTGTAGCATTTTGCATACTGATT...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CCA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAACTGATCCAGATAGTTTaGTATGCAAATGGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFELIQIV*YANGVC
Trigger: GCAAACACCATTTGCATACCAAACTATCTGGATCAG...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR TCA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAAAGAATGAATCAAAGCTaGGACCCACTCTTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFERMNQS*DPLFFF
Trigger: AAAGAAAAAGAGTGGGTCTCAGCTTTGATTCATTCT...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR GCA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATATGCAAATGGTGTTTaGTTTCACATCATTCTTGGT +
Preference number: 4 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSYANGV*FHIILG
Trigger: ACCAAGAATGATGTGAAAGCAAACACCATTTGCATA...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR GCA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAACCAGATAGTTTGGTATaGAAATGGTGTTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFEPDSLV*KWCLLS
Trigger: TGAAAGCAAACACCATTTGCATACCAAACTATCTGG...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CCA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAAAGTTTGGTATGCAAATaGTGTTTGCTTTCACATCAT +
Preference number: 4 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFESLVCK*CLLSHH
Trigger: ATGATGTGAAAGCAAACACCATTTGCATACCAAACT...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS CCA 90 bp GGGCTCAGAATGAGGCCGTGGAGGCACTTTGGCACCGTTTGGGGCTaGCGACATTCCTCTTACAGGGCTCTCCTGGACTGCAGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: GLRMRPWRHFGTVWG*RHSSYRALLDCSAG
Trigger: TCCAGCACTGCAGTCCAGGAGAGCCCTGTAAGAGGAATGTCGCCAGCCCCAAACGGTGCCAAAGTGCCTCCACGGCCTCATTCTGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326581.9
ENST00000477187.1
ENST00000503257.1
ENST00000514652.5
CDS-3UTR CAA 90 bp AGGATGGAGATCCCAGAGGAAGGAGCAGGCAGACACCTTTGCTGTCTTGCAACTGGCCGTGGAGGCACTTaGGCACCGTTTGGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: RMEIPEEGAGRHLCCLATGRGGT*APFGAG
Trigger: GCCAGCCCCAAACGGTGCCAAAGTGCCTCCACGGCC...AGTTGCAAGACAGCAAAGGTGTCTGCCTGCTCCTTCCTCTGGGATCTCCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS CCA 90 bp TCTACTGGGCTCAGAATGAGGCCGTGGAGGCACTTTGGCACCGTTTaGGGCTGGCGACATTCCTCTTACAGGGCTCTCCTGGACTGCAGT +
Preference number: 5 (lower is better)
Translates to: STGLRMRPWRHFGTV*GWRHSSYRALLDCS
Trigger: ACTGCAGTCCAGGAGAGCCCTGTAAGAGGAATGTCGCCAGCCCCAAACGGTGCCAAAGTGCCTCCACGGCCTCATTCTGAGCCCAGTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326581.9
ENST00000477187.1
ENST00000503257.1
ENST00000514652.5
CDS GCA 90 bp ACCGTTTGGGGCTGGCGACATTCCTCTTACAGGGCTCTCCTGGACTaGAGTGCTGGAGGGGTAACTGCAATTGGCAAATGGTATCCTGTT +
Preference number: 5 (lower is better)
Translates to: TVWGWRHSSYRALLD*SAGGVTAIGKWYPV
Trigger: AACAGGATACCATTTGCCAATTGCAGTTACCCCTCCAGCACTGCAGTCCAGGAGAGCCCTGTAAGAGGAATGTCGCCAGCCCCAAACGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326581.9
ENST00000477187.1
ENST00000503257.1
ENST00000514652.5
CDS CCA 90 bp CTGATGATACCTCTAGGTATGGGAAAACTCAAGGCAACCAGGGTCTaGAGCAGACCCCCAGCAAACTGCAGCAGCCCTACAGAAGAGTGG +
Preference number: 5 (lower is better)
Translates to: LMIPLGMGKLKATRV*SRPPANCSSPTEEW
Trigger: CCACTCTTCTGTAGGGCTGCTGCAGTTTGCTGGGGGTCTGCTCCAGACCCTGGTTGCCTTGAGTTTTCCCATACCTAGAGGTATCATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CAA 90 bp AACCAAACCTATAGTTCCTGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGGGCCGTGGAGGCACTTaGGCACCGTTTGGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: NQTYSSCCPAVLLLKECLGRGGT*APFGAG
Trigger: GCCAGCCCCAAACGGTGCCAAAGTGCCTCCACGGCC...CAGACACTCTTTGAGAAGCAAGACAGCAGGACAACAGGAACTATAGGTTTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS GCA 90 bp TTGGGGCTGGCGACATTCCTCTTACAGGGCTCTCCTGGACTGCAGTaGTGGAGGGGTAACTGCAATTGGCAAATGGTATCCTGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: LGLATFLLQGSPGLQ*WRGNCNWQMVSCSS
Trigger: AGAAGAACAGGATACCATTTGCCAATTGCAGTTACCCCTCCAGCACTGCAGTCCAGGAGAGCCCTGTAAGAGGAATGTCGCCAGCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326581.9
ENST00000477187.1
ENST00000503257.1
ENST00000514652.5
CDS CCA 90 bp GGGCTGGCGACATTCCTCTTACAGGGCTCTCCTGGACTGCAGTGCTaGAGGGGTAACTGCAATTGGCAAATGGTATCCTGTTCTTCTCTA +
Preference number: 5 (lower is better)
Translates to: GLATFLLQGSPGLQC*RGNCNWQMVSCSSL
Trigger: TAGAGAAGAACAGGATACCATTTGCCAATTGCAGTTACCCCTCCAGCACTGCAGTCCAGGAGAGCCCTGTAAGAGGAATGTCGCCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326581.9
ENST00000477187.1
ENST00000503257.1
ENST00000514652.5
CDS-3UTR CAA 90 bp AGGATGGAGATCCCAGAGGAAGGAGCAGGCAGACACCTTTGCTGTCTTGCAACTTTGCTGACACTGGTTTaGCTGATCCACTCTCCTGAG +
Preference number: 5 (lower is better)
Translates to: RMEIPEEGAGRHLCCLATLLTLV*LIHSPE
Trigger: CTCAGGAGAGTGGATCAGCAAAACCAGTGTCAGCAA...AGTTGCAAGACAGCAAAGGTGTCTGCCTGCTCCTTCCTCTGGGATCTCCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CAA 90 bp CCTCTAGGTATGGGAAAACTCAAGGCAACCAGGGTCTGGAGCAGACCCCCAGCATCTACCTCCGGTGTGTaGAAGGATAACATGCTCTTT +
Preference number: 5 (lower is better)
Translates to: PLGMGKLKATRVWSRPPASTSGV*KDNMLF
Trigger: AAAGAGCATGTTATCCTTCAACACACCGGAGGTAGA...TGCTGGGGGTCTGCTCCAGACCCTGGTTGCCTTGAGTTTTCCCATACCTAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CAA 90 bp AAACCTATAGTTCCTGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCAGCACTTTGGCACCGTTaGGGGCTGGCGACATTCCTC +
Preference number: 5 (lower is better)
Translates to: KPIVPVVLLSCFSKSVCPALWHR*GLATFL
Trigger: GAGGAATGTCGCCAGCCCCAAACGGTGCCAAAGTGC...TGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACAGGAACTATAGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CAA 90 bp AGGATGGAGATCCCAGAGGAAGGAGCAGGCAGACACCTTTGCTGTCTTGCAACTATAAGTAGTGGAGGCTaGTGCTCAGCCTCTTTTGGT +
Preference number: 5 (lower is better)
Translates to: RMEIPEEGAGRHLCCLATISSGG*CSASFG
Trigger: ACCAAAAGAGGCTGAGCACAAGCCTCCACTACTTAT...AGTTGCAAGACAGCAAAGGTGTCTGCCTGCTCCTTCCTCTGGGATCTCCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CAA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCAGGCCGTGGAGGCACTTaGGCACCGTTTGGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSGRGGT*APFGAG
Trigger: GCCAGCCCCAAACGGTGCCAAAGTGCCTCCACGGCC...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CAA 90 bp CCTCTAGGTATGGGAAAACTCAAGGCAACCAGGGTCTGGAGCAGACCCCCAGCAGTATGCAAATGGTGTTaGCTTTCACATCATTCTTGG +
Preference number: 5 (lower is better)
Translates to: PLGMGKLKATRVWSRPPAVCKWC*LSHHSW
Trigger: CCAAGAATGATGTGAAAGCAAACACCATTTGCATAC...TGCTGGGGGTCTGCTCCAGACCCTGGTTGCCTTGAGTTTTCCCATACCTAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CAA 90 bp TCCACAATTCTTGATTCTCCCTGGTTCCCCTACAGACTGGAGCTGGGCTTCTGGCTTCAGATCCTTGACTaGACACTCTGGTTGGTTGAT +
Preference number: 5 (lower is better)
Translates to: STILDSPWFPYRLELGFWLQILD*TLWLVD
Trigger: ATCAACCAACCAGAGTGTCAAGTCAAGGATCTGAAG...CCAGAAGCCCAGCTCCAGTCTGTAGGGGAACCAGGGAGAATCAAGAATTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CAA 90 bp AGGATGGAGATCCCAGAGGAAGGAGCAGGCAGACACCTTTGCTGTCTTGCAACTAGGATAACATGCTCTTaGGGGACAGAGGTTGTATTC +
Preference number: 5 (lower is better)
Translates to: RMEIPEEGAGRHLCCLATRITCS*GTEVVF
Trigger: GAATACAACCTCTGTCCCCAAAGAGCATGTTATCCT...AGTTGCAAGACAGCAAAGGTGTCTGCCTGCTCCTTCCTCTGGGATCTCCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CAA 90 bp TCCACAATTCTTGATTCTCCCTGGTTCCCCTACAGACTGGAGCTGGGCTTCTGGATGTTATTCAAGCCTTaGATGTGGCAGACTCTTCTG +
Preference number: 5 (lower is better)
Translates to: STILDSPWFPYRLELGFWMLFKP*MWQTLL
Trigger: CAGAAGAGTCTGCCACATCAAAGGCTTGAATAACAT...CCAGAAGCCCAGCTCCAGTCTGTAGGGGAACCAGGGAGAATCAAGAATTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CAA 90 bp TCCACAATTCTTGATTCTCCCTGGTTCCCCTACAGACTGGAGCTGGGCTTCTGGGAGATCATTGTCCTTTaGTTAGGTCAATGCAGGGTT +
Preference number: 5 (lower is better)
Translates to: STILDSPWFPYRLELGFWEIIVL*LGQCRV
Trigger: AACCCTGCATTGACCTAACAAAAGGACAATGATCTC...CCAGAAGCCCAGCTCCAGTCTGTAGGGGAACCAGGGAGAATCAAGAATTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CAA 90 bp AACCAAACCTATAGTTCCTGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGCCCAGGATGAGGAGTTaGGTAGGAGAGGCCAGATAC +
Preference number: 5 (lower is better)
Translates to: NQTYSSCCPAVLLLKECLPRMRS*VGEARY
Trigger: GTATCTGGCCTCTCCTACCAAACTCCTCATCCTGGG...CAGACACTCTTTGAGAAGCAAGACAGCAGGACAACAGGAACTATAGGTTTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS GCA 90 bp TCATCATTCACAGTACAGATTGGAATGTTATTCAAGCCTAGATCATaGCTTCAGCACCTAGGCTCTCAGCTCCCCAGCTCCACATATGTC +
Preference number: 5 (lower is better)
Translates to: SSFTVQIGMLFKPRS*LQHLGSQLPSSTYV
Trigger: GACATATGTGGAGCTGGGGAGCTGAGAGCCTAGGTGCTGAAGGCATGATCTAGGCTTGAATAACATTCCAATCTGTACTGTGAATGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503257.1
CDS-3UTR CAA 90 bp GCAGTAAAATTTGGGGGCAATTTAACTGTGGGTGGTGATTTAACTGTGGGTGGCAAGAACTCAAGTCTGTaGATACCCTCCCAGCCTCAT +
Preference number: 5 (lower is better)
Translates to: AVKFGGNLTVGGDLTVGGKNSSL*IPSQPH
Trigger: ATGAGGCTGGGAGGGTATCAACAGACTTGAGTTCTT...GCCACCCACAGTTAAATCACCACCCACAGTTAAATTGCCCCCAAATTTTACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CAA 90 bp TGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCATGATCAGGCACTTTGACTTGACACTCTGGTaGGTTGATCCCCTTCTGTAT +
Preference number: 5 (lower is better)
Translates to: CCPAVLLLKECLSMIRHFDLTLW*VDPLLY
Trigger: ATACAGAAGGGGATCAACCAACCAGAGTGTCAAGTC...AAAGTGCCTGATCATGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CAA 90 bp TGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCATGATCAGGCACTTTGACTTTCCACAATTCTaGATTCTCCCTGGTTCCCCT +
Preference number: 5 (lower is better)
Translates to: CCPAVLLLKECLSMIRHFDFPQF*ILPGSP
Trigger: AGGGGAACCAGGGAGAATCAAGAATTGTGGAAAGTC...AAAGTGCCTGATCATGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CAA 90 bp TCCACAATTCTTGATTCTCCCTGGTTCCCCTACAGACTGGAGCTGGGCTTCTGGAGAAAGGGGCATGACTaGGGAATTCTTATACAAAAA +
Preference number: 5 (lower is better)
Translates to: STILDSPWFPYRLELGFWRKGHD*GILIQK
Trigger: TTTTTGTATAAGAATTCCCAAGTCATGCCCCTTTCT...CCAGAAGCCCAGCTCCAGTCTGTAGGGGAACCAGGGAGAATCAAGAATTGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CAA 90 bp AAACCTATAGTTCCTGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCAAAGAACTCAAGTCTGTaGATACCCTCCCAGCCTCAT +
Preference number: 5 (lower is better)
Translates to: KPIVPVVLLSCFSKSVCPKNSSL*IPSQPH
Trigger: ATGAGGCTGGGAGGGTATCAACAGACTTGAGTTCTT...TGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACAGGAACTATAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CAA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAAGCACTTTGGCACCGTTaGGGGCTGGCGACATTCCTC +
Preference number: 5 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFEALWHR*GLATFL
Trigger: GAGGAATGTCGCCAGCCCCAAACGGTGCCAAAGTGC...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CAA 90 bp GCAGTAAAATTTGGGGGCAATTTAACTGTGGGTGGTGATTTAACTGTGGGTGGCCATCATTCTTGGTACTaGTCATCCCTGAAGAACAGG +
Preference number: 5 (lower is better)
Translates to: AVKFGGNLTVGGDLTVGGHHSWY*SSLKNR
Trigger: CCTGTTCTTCAGGGATGACAAGTACCAAGAATGATG...GCCACCCACAGTTAAATCACCACCCACAGTTAAATTGCCCCCAAATTTTACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CAA 90 bp AACCAAACCTATAGTTCCTGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGCTGCTGCTGGTTCCATaGAGGTGTTTCTTCTGTGAT +
Preference number: 5 (lower is better)
Translates to: NQTYSSCCPAVLLLKECLLLLVP*RCFFCD
Trigger: ATCACAGAAGAAACACCTCAATGGAACCAGCAGCAG...CAGACACTCTTTGAGAAGCAAGACAGCAGGACAACAGGAACTATAGGTTTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CAA 90 bp GAGGCTTGTGCTCAGCCTCTTTTGGTACTTCCTTGTTTTCTTCAGATCCTTGACAAATGCTACAGAGCTTaGCCAGGATCTCCTATAGGA +
Preference number: 5 (lower is better)
Translates to: EACAQPLLVLPCFLQILDKCYRA*PGSPIG
Trigger: TCCTATAGGAGATCCTGGCAAAGCTCTGTAGCATTT...GTCAAGGATCTGAAGAAAACAAGGAAGTACCAAAAGAGGCTGAGCACAAGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CAA 90 bp GAGGCTTGTGCTCAGCCTCTTTTGGTACTTCCTTGTTTTCTTCAGATCCTTGACTTTTTGGGGTCTAACTaGATTGACCTCACTTCCAGA +
Preference number: 5 (lower is better)
Translates to: EACAQPLLVLPCFLQILDFLGSN*IDLTSR
Trigger: TCTGGAAGTGAGGTCAATCAAGTTAGACCCCAAAAA...GTCAAGGATCTGAAGAAAACAAGGAAGTACCAAAAGAGGCTGAGCACAAGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CAA 90 bp GAGGCTTGTGCTCAGCCTCTTTTGGTACTTCCTTGTTTTCTTCAGATCCTTGACATGTTATTCAAGCCTTaGATGTGGCAGACTCTTCTG +
Preference number: 5 (lower is better)
Translates to: EACAQPLLVLPCFLQILDMLFKP*MWQTLL
Trigger: CAGAAGAGTCTGCCACATCAAAGGCTTGAATAACAT...GTCAAGGATCTGAAGAAAACAAGGAAGTACCAAAAGAGGCTGAGCACAAGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CAA 90 bp GAAGCAGCCACTGTAAAACTTCTGCCAGAGAATCAGTATGCAAAATGCTACAGACTGCTGCTGGTTCCATaGAGGTGTTTCTTCTGTGAT +
Preference number: 5 (lower is better)
Translates to: EAATVKLLPENQYAKCYRLLLVP*RCFFCD
Trigger: ATCACAGAAGAAACACCTCAATGGAACCAGCAGCAG...TCTGTAGCATTTTGCATACTGATTCTCTGGCAGAAGTTTTACAGTGGCTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CAA 90 bp GAAGCAGCCACTGTAAAACTTCTGCCAGAGAATCAGTATGCAAAATGCTACAGAGACTTGACACTCTGGTaGGTTGATCCCCTTCTGTAT +
Preference number: 5 (lower is better)
Translates to: EAATVKLLPENQYAKCYRDLTLW*VDPLLY
Trigger: ATACAGAAGGGGATCAACCAACCAGAGTGTCAAGTC...TCTGTAGCATTTTGCATACTGATTCTCTGGCAGAAGTTTTACAGTGGCTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CAA 90 bp TGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCATGATCAGGCACTTTATACTTTGGGCTATTTaGGACCAAGGTAGGACTTTC +
Preference number: 5 (lower is better)
Translates to: CCPAVLLLKECLSMIRHFILWAI*DQGRTF
Trigger: GAAAGTCCTACCTTGGTCCAAAATAGCCCAAAGTAT...AAAGTGCCTGATCATGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CAA 90 bp AATCAGTATGCAAAATGCTACAGAGCTTTGCCAGGATCTCCTATAGGAGCATTCCTTCAGATCCTTGACTaGACACTCTGGTTGGTTGAT +
Preference number: 5 (lower is better)
Translates to: NQYAKCYRALPGSPIGAFLQILD*TLWLVD
Trigger: ATCAACCAACCAGAGTGTCAAGTCAAGGATCTGAAG...GAATGCTCCTATAGGAGATCCTGGCAAAGCTCTGTAGCATTTTGCATACTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CAA 90 bp GAGGCTTGTGCTCAGCCTCTTTTGGTACTTCCTTGTTTTCTTCAGATCCTTGACGGAGGAGAATTTGGTTaGCTGAAATATTCTGCAACA +
Preference number: 5 (lower is better)
Translates to: EACAQPLLVLPCFLQILDGGEFG*LKYSAT
Trigger: TGTTGCAGAATATTTCAGCAAACCAAATTCTCCTCC...GTCAAGGATCTGAAGAAAACAAGGAAGTACCAAAAGAGGCTGAGCACAAGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CAA 90 bp TGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCATGATCAGGCACTTTCATTCACAGTACAGATaGGAATGTTATTCAAGCCTT +
Preference number: 5 (lower is better)
Translates to: CCPAVLLLKECLSMIRHFHSQYR*ECYSSL
Trigger: AAGGCTTGAATAACATTCCAATCTGTACTGTGAATG...AAAGTGCCTGATCATGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CAA 90 bp GTCAATGCAGGGTTTCCCTTTTCACTGAATTGCTATAACCAAACCTATAGTTCCCATCATTCTTGGTACTaGTCATCCCTGAAGAACAGG +
Preference number: 5 (lower is better)
Translates to: VNAGFPFSLNCYNQTYSSHHSWY*SSLKNR
Trigger: CCTGTTCTTCAGGGATGACAAGTACCAAGAATGATG...GGAACTATAGGTTTGGTTATAGCAATTCAGTGAAAAGGGAAACCCTGCATTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CAA 90 bp AACCAAACCTATAGTTCCTGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGGTATGCAAATGGTGTTaGCTTTCACATCATTCTTGG +
Preference number: 5 (lower is better)
Translates to: NQTYSSCCPAVLLLKECLVCKWC*LSHHSW
Trigger: CCAAGAATGATGTGAAAGCAAACACCATTTGCATAC...CAGACACTCTTTGAGAAGCAAGACAGCAGGACAACAGGAACTATAGGTTTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CAA 90 bp ATGAAAGAATTCACCCAGTCTAGAACTTCTACCTCCGGTGTGTTGAAGGATAACTGTGCTCAGCCTCTTTaGGTACTTCCTTGTTTTCTT +
Preference number: 5 (lower is better)
Translates to: MKEFTQSRTSTSGVLKDNCAQPL*VLPCFL
Trigger: AAGAAAACAAGGAAGTACCAAAAGAGGCTGAGCACA...GTTATCCTTCAACACACCGGAGGTAGAAGTTCTAGACTGGGTGAATTCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CAA 90 bp GAAGCAGCCACTGTAAAACTTCTGCCAGAGAATCAGTATGCAAAATGCTACAGAATTCTTGTATACTCCTaGCTGACACTGGTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: EAATVKLLPENQYAKCYRILVYS*LTLVLL
Trigger: CAGCAAAACCAGTGTCAGCAAGGAGTATACAAGAAT...TCTGTAGCATTTTGCATACTGATTCTCTGGCAGAAGTTTTACAGTGGCTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CAA 90 bp TTCTGGTGGAACACAAAACTGCTCTTTTCAATTGTATTTCAGCTGTCTTGTAGGTGTTGTCCTGCTGTCTaGCTTCTCAAAGAGTGTCTG +
Preference number: 5 (lower is better)
Translates to: FWWNTKLLFSIVFQLSCRCCPAV*LLKECL
Trigger: CAGACACTCTTTGAGAAGCAAGACAGCAGGACAACA...CCTACAAGACAGCTGAAATACAATTGAAAAGAGCAGTTTTGTGTTCCACCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CAA 90 bp TGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGTCCATGATCAGGCACTTTTCTCTCTGGTTGACTTaGTCTCCAGTGAAATTATTT +
Preference number: 5 (lower is better)
Translates to: CCPAVLLLKECLSMIRHFSLWLT*SPVKLF
Trigger: AAATAATTTCACTGGAGACAAAGTCAACCAGAGAGA...AAAGTGCCTGATCATGGACAGACACTCTTTGAGAAGCAAGACAGCAGGACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CAA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCACTGCTGCTGGTTCCATaGAGGTGTTTCTTCTGTGAT +
Preference number: 5 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSLLLVP*RCFFCD
Trigger: ATCACAGAAGAAACACCTCAATGGAACCAGCAGCAG...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CAA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCAGACTTGACACTCTGGTaGGTTGATCCCCTTCTGTAT +
Preference number: 5 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSDLTLW*VDPLLY
Trigger: ATACAGAAGGGGATCAACCAACCAGAGTGTCAAGTC...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CAA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAATTGCTGACACTGGTTTaGCTGATCCACTCTCCTGAG +
Preference number: 5 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFELLTLV*LIHSPE
Trigger: CTCAGGAGAGTGGATCAGCAAAACCAGTGTCAGCAA...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CAA 90 bp AGCAGCCACTGTAAAACTTCTGCCAGAGAATCAGTATGCAAAATGCTACAGAGCCATAAAGAGGACCACTaGATTCCTCAATACCAAAAA +
Preference number: 5 (lower is better)
Translates to: SSHCKTSARESVCKMLQSHKEDH*IPQYQK
Trigger: TTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATG...GCTCTGTAGCATTTTGCATACTGATTCTCTGGCAGAAGTTTTACAGTGGCTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CAA 90 bp AACCAAACCTATAGTTCCTGTTGTCCTGCTGTCTTGCTTCTCAAAGAGTGTCTGGAGATAGTGTCTTTTTaGGGTTTGGTTAATCACAGT +
Preference number: 5 (lower is better)
Translates to: NQTYSSCCPAVLLLKECLEIVSF*GLVNHS
Trigger: ACTGTGATTAACCAAACCCAAAAAAGACACTATCTC...CAGACACTCTTTGAGAAGCAAGACAGCAGGACAACAGGAACTATAGGTTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CAA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAAAAGAACTCAAGTCTGTaGATACCCTCCCAGCCTCAT +
Preference number: 5 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFEKNSSL*IPSQPH
Trigger: ATGAGGCTGGGAGGGTATCAACAGACTTGAGTTCTT...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CAA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAAATAAGTAGTGGAGGCTaGTGCTCAGCCTCTTTTGGT +
Preference number: 5 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFEISSGG*CSASFG
Trigger: ACCAAAAGAGGCTGAGCACAAGCCTCCACTACTTAT...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CAA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCAAGGATAACATGCTCTTaGGGGACAGAGGTTGTATTC +
Preference number: 5 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSRITCS*GTEVVF
Trigger: GAATACAACCTCTGTCCCCAAAGAGCATGTTATCCT...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CAA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTTTGGGGTCTAACTaGATTGACCTCACTTCCAGA +
Preference number: 5 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSFLGSN*IDLTSR
Trigger: TCTGGAAGTGAGGTCAATCAAGTTAGACCCCAAAAA...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CAA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCAATGTTATTCAAGCCTTaGATGTGGCAGACTCTTCTG +
Preference number: 5 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSMLFKP*MWQTLL
Trigger: CAGAAGAGTCTGCCACATCAAAGGCTTGAATAACAT...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CAA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAACATCATTCTTGGTACTaGTCATCCCTGAAGAACAGG +
Preference number: 5 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFEHHSWY*SSLKNR
Trigger: CCTGTTCTTCAGGGATGACAAGTACCAAGAATGATG...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CAA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCAGTATGCAAATGGTGTTaGCTTTCACATCATTCTTGG +
Preference number: 5 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSVCKWC*LSHHSW
Trigger: CCAAGAATGATGTGAAAGCAAACACCATTTGCATAC...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CAA 90 bp TTCTGGTGGAACACAAAACTGCTCTTTTCAATTGTATTTCAGCTGTCTTGTAGGAAATGCTACAGAGCTTaGCCAGGATTTTTATTTCCT +
Preference number: 5 (lower is better)
Translates to: FWWNTKLLFSIVFQLSCRKCYRA*PGFLFP
Trigger: AGGAAATAAAAATCCTGGCAAAGCTCTGTAGCATTT...CCTACAAGACAGCTGAAATACAATTGAAAAGAGCAGTTTTGTGTTCCACCAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000514652.5
CDS-3UTR CAA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAATGTGCTCAGCCTCTTTaGGTACTTCCTTGTTTTCTT +
Preference number: 5 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFECAQPL*VLPCFL
Trigger: AAGAAAACAAGGAAGTACCAAAAGAGGCTGAGCACA...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CAA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAAATTCTTGTATACTCCTaGCTGACACTGGTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFEILVYS*LTLVLL
Trigger: CAGCAAAACCAGTGTCAGCAAGGAGTATACAAGAAT...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CAA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAACTTTGGGGACAGAGGTaGTATTCTTGTATACTCCTT +
Preference number: 5 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFELWGQR*YSCILL
Trigger: AAGGAGTATACAAGAATACAACCTCTGTCCCCAAAG...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CAA 90 bp TTCATATTATTTCTTCTTATAAGTAGTGGAGGCTTGTGCTCAGCCTCTTTTGGTCATTCACAGTACAGATaGGAATGTTATTCAAGCCTT +
Preference number: 5 (lower is better)
Translates to: FILFLLISSGGLCSASFGHSQYR*ECYSSL
Trigger: AAGGCTTGAATAACATTCCAATCTGTACTGTGAATG...ACCAAAAGAGGCTGAGCACAAGCCTCCACTACTTATAAGAAGAAATAATATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS-3UTR CAA 90 bp TACATGTGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCAAAATGCTACAGAGCTTaGCCAGGATTTTTATTTCCT +
Preference number: 5 (lower is better)
Translates to: YMCHHKEDHLIPQYQKYSKCYRA*PGFLFP
Trigger: AGGAAATAAAAATCCTGGCAAAGCTCTGTAGCATTT...TGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCACATGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000326581.9
CDS-3UTR CAA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAAGGAGGAGAATTTGGTTaGCTGAAATATTCTGCAACA +
Preference number: 5 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFEGGEFG*LKYSAT
Trigger: TGTTGCAGAATATTTCAGCAAACCAAATTCTCCTCC...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CAA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAACATTCACAGTACAGATaGGAATGTTATTCAAGCCTT +
Preference number: 5 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFEHSQYR*ECYSSL
Trigger: AAGGCTTGAATAACATTCCAATCTGTACTGTGAATG...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS-3UTR CAA 90 bp TGCCACCATAAAGAGGACCACTTGATTCCTCAATACCAAAAATATTCATTTGAACATAAAGAGGACCACTaGATTCCTCAATACCAAAAA +
Preference number: 5 (lower is better)
Translates to: CHHKEDHLIPQYQKYSFEHKEDH*IPQYQK
Trigger: TTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATG...TTCAAATGAATATTTTTGGTATTGAGGAATCAAGTGGTCCTCTTTATGGTGGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326581.9
ENST00000477187.1
CDS CCA 72 bp ATGAGGCCGTGGAGGCACTTTGGCACCGTTTGGGGCTaGCGACATTCCTCTTACAGGGCTCTCCTGGACTGC +
Preference number: 6 (lower is better)
Translates to: MRPWRHFGTVWG*RHSSYRALLDC
Trigger: GCAGTCCAGGAGAGCCCTGTAAGAGGAATGTCGCCAGCCCCAAACGGTGCCAAAGTGCCTCCACGGCCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326581.9
ENST00000477187.1
ENST00000503257.1
ENST00000514652.5
CDS CCA 72 bp CTCAGAATGAGGCCGTGGAGGCACTTTGGCACCGTTTaGGGCTGGCGACATTCCTCTTACAGGGCTCTCCTG +
Preference number: 6 (lower is better)
Translates to: LRMRPWRHFGTV*GWRHSSYRALL
Trigger: CAGGAGAGCCCTGTAAGAGGAATGTCGCCAGCCCCAAACGGTGCCAAAGTGCCTCCACGGCCTCATTCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326581.9
ENST00000477187.1
ENST00000503257.1
ENST00000514652.5
CDS CAA 72 bp GCTCAGAATGAGGCCGTGGAGGCACTTTGGCACCGTTaGGGGCTGGCGACATTCCTCTTACAGGGCTCTCCT +
Preference number: 6 (lower is better)
Translates to: AQNEAVEALWHR*GLATFLLQGSP
Trigger: AGGAGAGCCCTGTAAGAGGAATGTCGCCAGCCCCAAACGGTGCCAAAGTGCCTCCACGGCCTCATTCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326581.9
ENST00000477187.1
ENST00000503257.1
ENST00000514652.5
CDS CAA 90 bp TTCTACTGGGCTCAGAATGAGGCCGTGGAGGCACTTTGGCACCGTTaGGGGCTGGCGACATTCCTCTTACAGGGCTCTCCTGGACTGCAG +
Preference number: 6 (lower is better)
Translates to: FYWAQNEAVEALWHR*GLATFLLQGSPGLQ
Trigger: CTGCAGTCCAGGAGAGCCCTGTAAGAGGAATGTCGCCAGCCCCAAACGGTGCCAAAGTGCCTCCACGGCCTCATTCTGAGCCCAGTAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326581.9
ENST00000477187.1
ENST00000503257.1
ENST00000514652.5
CDS GCA 72 bp GGCTGGCGACATTCCTCTTACAGGGCTCTCCTGGACTaGAGTGCTGGAGGGGTAACTGCAATTGGCAAATGG +
Preference number: 6 (lower is better)
Translates to: GWRHSSYRALLD*SAGGVTAIGKW
Trigger: CCATTTGCCAATTGCAGTTACCCCTCCAGCACTGCAGTCCAGGAGAGCCCTGTAAGAGGAATGTCGCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326581.9
ENST00000477187.1
ENST00000503257.1
ENST00000514652.5
CDS CCA 72 bp TTCTACTGGGCTCAGAATGAGGCCGTGGAGGCACTTTaGCACCGTTTGGGGCTGGCGACATTCCTCTTACAG +
Preference number: 6 (lower is better)
Translates to: FYWAQNEAVEAL*HRLGLATFLLQ
Trigger: CTGTAAGAGGAATGTCGCCAGCCCCAAACGGTGCCAAAGTGCCTCCACGGCCTCATTCTGAGCCCAGTAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326581.9
ENST00000477187.1
ENST00000503257.1
ENST00000514652.5
CDS GCA 72 bp GCGACATTCCTCTTACAGGGCTCTCCTGGACTGCAGTaGTGGAGGGGTAACTGCAATTGGCAAATGGTATCC +
Preference number: 6 (lower is better)
Translates to: ATFLLQGSPGLQ*WRGNCNWQMVS
Trigger: GGATACCATTTGCCAATTGCAGTTACCCCTCCAGCACTGCAGTCCAGGAGAGCCCTGTAAGAGGAATGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326581.9
ENST00000477187.1
ENST00000503257.1
ENST00000514652.5
CDS GCA 72 bp CAGGGCTCTCCTGGACTGCAGTGCTGGAGGGGTAACTaGAATTGGCAAATGGTATCCTGTTCTTCTCTAAGT +
Preference number: 6 (lower is better)
Translates to: QGSPGLQCWRGN*NWQMVSCSSLS
Trigger: ACTTAGAGAAGAACAGGATACCATTTGCCAATTGCAGTTACCCCTCCAGCACTGCAGTCCAGGAGAGCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326581.9
ENST00000477187.1
ENST00000503257.1
ENST00000514652.5
CDS CCA 72 bp ACATTCCTCTTACAGGGCTCTCCTGGACTGCAGTGCTaGAGGGGTAACTGCAATTGGCAAATGGTATCCTGT +
Preference number: 6 (lower is better)
Translates to: TFLLQGSPGLQC*RGNCNWQMVSC
Trigger: ACAGGATACCATTTGCCAATTGCAGTTACCCCTCCAGCACTGCAGTCCAGGAGAGCCCTGTAAGAGGAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326581.9
ENST00000477187.1
ENST00000503257.1
ENST00000514652.5
CDS CCA 72 bp TCTCAGCTCCCCAGCTCCACATATGTCAGTTACTTATaGCTCATTCTGAGTCCCTCTCTAGGAATTGCTCTT +
Preference number: 6 (lower is better)
Translates to: SQLPSSTYVSYL*LILSPSLGIAL
Trigger: AAGAGCAATTCCTAGAGAGGGACTCAGAATGAGCCATAAGTAACTGACATATGTGGAGCTGGGGAGCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503257.1
CDS TCA 72 bp AGAACAGGAGCCAGGAGTAGAGCATGCCTTTGGAGGTaGTGGTGGTCTTTTGGCCTTAATTTCTTCCTTTTT +
Preference number: 6 (lower is better)
Translates to: RTGARSRACLWR*WWSFGLNFFLF
Trigger: AAAAAGGAAGAAATTAAGGCCAAAAGACCACCATCACCTCCAAAGGCATGCTCTACTCCTGGCTCCTGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326581.9
ENST00000477187.1
ENST00000503257.1
ENST00000514652.5
CDS CAA 72 bp AAAGCAGGTGATCTTGCTGACAAGAACTCAAGTCTGTaGATACCCTCCCAGCCTCATAATATGTCTAGACTG +
Preference number: 6 (lower is better)
Translates to: KAGDLADKNSSL*IPSQPHNMSRL
Trigger: CAGTCTAGACATATTATGAGGCTGGGAGGGTATCAACAGACTTGAGTTCTTGTCAGCAAGATCACCTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326581.9
ENST00000477187.1
ENST00000514652.5
CDS GCA 72 bp GTAGTTAGACTGGCCAACTCCCCACAATGTTCCAAATaGATTCTCATCATCATTCACAGTACAGATTGGAAT +
Preference number: 6 (lower is better)
Translates to: VVRLANSPQCSK*ILIIIHSTDWN
Trigger: ATTCCAATCTGTACTGTGAATGATGATGAGAATGCATTTGGAACATTGTGGGGAGTTGGCCAGTCTAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326581.9
ENST00000477187.1
ENST00000503257.1
ENST00000514652.5
CDS CAA 90 bp ACAATATTAAAAGCAGGTGATCTTGCTGACAAGAACTCAAGTCTGTaGATACCCTCCCAGCCTCATAATATGTCTAGACTGAGTTTTTGT +
Preference number: 6 (lower is better)
Translates to: TILKAGDLADKNSSL*IPSQPHNMSRLSFC
Trigger: ACAAAAACTCAGTCTAGACATATTATGAGGCTGGGAGGGTATCAACAGACTTGAGTTCTTGTCAGCAAGATCACCTGCTTTTAATATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326581.9
ENST00000477187.1
ENST00000514652.5
CDS GCA 72 bp GAGTGGCTTTTATTTCCTGATCCAGATAGTTTGGTATaGAAATGGTGTTTGCTTTCACATCATTCTTGGTAC +
Preference number: 6 (lower is better)
Translates to: EWLLFPDPDSLV*KWCLLSHHSWY
Trigger: GTACCAAGAATGATGTGAAAGCAAACACCATTTGCATACCAAACTATCTGGATCAGGAAATAAAAGCCACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477187.1
CDS CCA 72 bp TCCAAATGCATTCTCATCATCATTCACAGTACAGATTaGAATGTTATTCAAGCCTTTGATGTGGCAGACTCT +
Preference number: 6 (lower is better)
Translates to: SKCILIIIHSTD*NVIQAFDVADS
Trigger: AGAGTCTGCCACATCAAAGGCTTGAATAACATTCCAATCTGTACTGTGAATGATGATGAGAATGCATTTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326581.9
ENST00000477187.1
ENST00000514652.5
CDS CCA 72 bp CAGAAGAGTGGCTTTTATTTCCTGATCCAGATAGTTTaGTATGCAAATGGTGTTTGCTTTCACATCATTCTT +
Preference number: 6 (lower is better)
Translates to: QKSGFYFLIQIV*YANGVCFHIIL
Trigger: AAGAATGATGTGAAAGCAAACACCATTTGCATACCAAACTATCTGGATCAGGAAATAAAAGCCACTCTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477187.1