Pregenerated sensors for C3ORF86 (Homo sapiens)
Ensembl gene IDs: ENSG00000225873Ensembl transcript IDs: ENST00000416124.2, ENST00000634610.1, ENST00000636468.1, ENST00000637612.1, ENST00000647047.1
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGCTTCTCTGCGGATCCTGCAATGTGGACCCCTGTCTGGATGTGGTaGTGGGGAGGTGGCTCCTCCCTGTCCCAGAGGCCCATCTCGTGT | + |
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Preference number: 5 (lower is better) Translates to: CFSADPAMWTPVWMW*WGGGSSLSQRPISC Trigger: ACACGAGATGGGCCTCTGGGACAGGGAGGAGCCACCTCCCCAGCACCACATCCAGACAGGGGTCCACATTGCAGGATCCGCAGAGAAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637612.1 |
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| CDS CCA 90 bp | AGGAGCCTCCTGCACACTCCTGGGCTGAAATGGGGGCTTCTTTTGTaGGCTCTCAGGAGAAACAGCAGGTGCATCTGCCTTCTGCGGGGG | + |
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Preference number: 5 (lower is better) Translates to: RSLLHTPGLKWGLLL*ALRRNSRCICLLRG Trigger: CCCCCGCAGAAGGCAGATGCACCTGCTGTTTCTCCTGAGAGCCCACAAAAGAAGCCCCCATTTCAGCCCAGGAGTGTGCAGGAGGCTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000416124.2 ENST00000634610.1 ENST00000636468.1 ENST00000637612.1 ENST00000647047.1 |
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| CDS GCA 90 bp | TCGTGTTCCCACACAGGCACGGAGTCCAGGGACACCCCCTGCTGCTaGCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGGGT | + |
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Preference number: 5 (lower is better) Translates to: SCSHTGTESRDTPCC*PKSSNQCCSLFLWG Trigger: ACCCCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGCAGCAGCAGGGGGTGTCCCTGGACTCCGTGCCTGTGTGGGAACACGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637612.1 |
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| CDS GCA 90 bp | CCCATCTCGTGTTCCCACACAGGCACGGAGTCCAGGGACACCCCCTaGTGCTGCCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTT | + |
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Preference number: 5 (lower is better) Translates to: PISCSHTGTESRDTP*CCPKSSNQCCSLFL Trigger: AAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGCAGCAGCAGGGGGTGTCCCTGGACTCCGTGCCTGTGTGGGAACACGAGATGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637612.1 |
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| CDS GCA 90 bp | ATCTCGTGTTCCCACACAGGCACGGAGTCCAGGGACACCCCCTGCTaGTGCCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTTCTTTGG | + |
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Preference number: 5 (lower is better) Translates to: ISCSHTGTESRDTPC*CPKSSNQCCSLFLW Trigger: CCAAAGAAATAGACTGCAGCACTGATTGGACGACTTTGGGCAGCAGCAGGGGGTGTCCCTGGACTCCGTGCCTGTGTGGGAACACGAGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637612.1 |
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| CDS TCA 90 bp | TTCACCCAGAAAAACATGTCTAGAGGTTCCTGTCCCTGTCCAAACTaGCCTCTAGACATACCTATAATCTCAACACTGGGAGGTGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: FTQKNMSRGSCPCPN*PLDIPIISTLGGGR Trigger: CCTCCCACCTCCCAGTGTTGAGATTATAGGTATGTCTAGAGGTCAGTTTGGACAGGGACAGGAACCTCTAGACATGTTTTTCTGGGTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000634610.1 |
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| CDS CCA 72 bp | GAACGGTGGGGGCTCCTCACTCCTCCGGCTTTGGCCTaGCCCAGGTGGGTGCAGATGGGCAGGGGTTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: ERWGLLTPPALA*PRWVQMGRGFL Trigger: CAAGAAACCCCTGCCCATCTGCACCCACCTGGGCCAGGCCAAAGCCGGAGGAGTGAGGAGCCCCCACCGTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000416124.2 ENST00000634610.1 ENST00000636468.1 ENST00000637612.1 ENST00000647047.1 |
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| CDS CCA 72 bp | GGGTGCAGAAGGGCTGAGAGGAGAGGTCGAGACCGGTaGCTGAAGGGCTGGTCCCAGGGGTCCGAGTATGGG | + |
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Preference number: 6 (lower is better) Translates to: GCRRAERRGRDR*LKGWSQGSEYG Trigger: CCCATACTCGGACCCCTGGGACCAGCCCTTCAGCCACCGGTCTCGACCTCTCCTCTCAGCCCTTCTGCACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000416124.2 ENST00000634610.1 ENST00000636468.1 ENST00000637612.1 ENST00000647047.1 |
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| CDS TCA 72 bp | GCAGAAGGGCTGAGAGGAGAGGTCGAGACCGGTGGCTaGAGGGCTGGTCCCAGGGGTCCGAGTATGGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: AEGLRGEVETGG*RAGPRGPSMGR Trigger: TCTGCCCATACTCGGACCCCTGGGACCAGCCCTTCAGCCACCGGTCTCGACCTCTCCTCTCAGCCCTTCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000416124.2 ENST00000634610.1 ENST00000636468.1 ENST00000637612.1 ENST00000647047.1 |
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| CDS GCA 72 bp | TCCCACACAGGCACGGAGTCCAGGGACACCCCCTGCTaGTGCCCAAAGTCGTCCAATCAGTGCTGCAGTCTA | + |
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Preference number: 6 (lower is better) Translates to: SHTGTESRDTPC*CPKSSNQCCSL Trigger: TAGACTGCAGCACTGATTGGACGACTTTGGGCAGCAGCAGGGGGTGTCCCTGGACTCCGTGCCTGTGTGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637612.1 |
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| CDS GCA 72 bp | TGTTCCCACACAGGCACGGAGTCCAGGGACACCCCCTaGTGCTGCCCAAAGTCGTCCAATCAGTGCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: CSHTGTESRDTP*CCPKSSNQCCS Trigger: ACTGCAGCACTGATTGGACGACTTTGGGCAGCAGCAGGGGGTGTCCCTGGACTCCGTGCCTGTGTGGGAACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637612.1 |
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| CDS GCA 72 bp | CACACAGGCACGGAGTCCAGGGACACCCCCTGCTGCTaGCCAAAGTCGTCCAATCAGTGCTGCAGTCTATTT | + |
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Preference number: 6 (lower is better) Translates to: HTGTESRDTPCC*PKSSNQCCSLF Trigger: AAATAGACTGCAGCACTGATTGGACGACTTTGGGCAGCAGCAGGGGGTGTCCCTGGACTCCGTGCCTGTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000637612.1 |
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| CDS GCA 72 bp | ATCCTCCTGCACCATTTCCTGCTTCTCTGCGGATCCTaGAATGTGGACCCCTGTCTGGATGTGGTGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: ILLHHFLLLCGS*NVDPCLDVVLG Trigger: CCCCAGCACCACATCCAGACAGGGGTCCACATTGCAGGATCCGCAGAGAAGCAGGAAATGGTGCAGGAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637612.1 |
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| CDS CCA 72 bp | CTGCACACTCCTGGGCTGAAATGGGGGCTTCTTTTGTaGGCTCTCAGGAGAAACAGCAGGTGCATCTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: LHTPGLKWGLLL*ALRRNSRCICL Trigger: AAGGCAGATGCACCTGCTGTTTCTCCTGAGAGCCCACAAAAGAAGCCCCCATTTCAGCCCAGGAGTGTGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000416124.2 ENST00000634610.1 ENST00000636468.1 ENST00000637612.1 ENST00000647047.1 |
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| CDS TCA 72 bp | TTCCTGTCCCTGTCCAAACTGACCTCTAGACATACATaGGGCCTTCTAGGGAAAGCAAAGCGGGCACCCACG | + |
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Preference number: 6 (lower is better) Translates to: FLSLSKLTSRHT*GLLGKAKRAPT Trigger: CGTGGGTGCCCGCTTTGCTTTCCCTAGAAGGCCTCATGTATGTCTAGAGGTCAGTTTGGACAGGGACAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636468.1 |
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| CDS GCA 72 bp | CCTCTAGACATACCCTGCATCCAGGTTAGATCCTCCTaGACCATTTCCTGCTTCTCTGCGGATCCTGCAATG | + |
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Preference number: 6 (lower is better) Translates to: PLDIPCIQVRSS*TISCFSADPAM Trigger: CATTGCAGGATCCGCAGAGAAGCAGGAAATGGTGCAGGAGGATCTAACCTGGATGCAGGGTATGTCTAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000637612.1 |
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| CDS TCA 72 bp | AAAAACATGTCTAGAGGTTCCTGTCCCTGTCCAAACTaGCCTCTAGACATACCTGTCGGAAGGTTCTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: KNMSRGSCPCPN*PLDIPVGRFWG Trigger: ACCCCAGAACCTTCCGACAGGTATGTCTAGAGGTCAGTTTGGACAGGGACAGGAACCTCTAGACATGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000416124.2 |
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| CDS CCA 72 bp | TCGTCCAATCAGTGCTGCAGTCTATTTCTTTGGGGTTaGGGGGATTTCTTCAGTATCATCCTTTATGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SSNQCCSLFLWG*GDFFSIILYEA Trigger: GGCCTCATAAAGGATGATACTGAAGAAATCCCCCCAACCCCAAAGAAATAGACTGCAGCACTGATTGGACGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000637612.1 |
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| CDS TCA 72 bp | AAAAACATGTCTAGAGGTTCCTGTCCCTGTCCAAACTaGCCTCTAGACATACCTATAATCTCAACACTGGGA | + |
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Preference number: 6 (lower is better) Translates to: KNMSRGSCPCPN*PLDIPIISTLG Trigger: TCCCAGTGTTGAGATTATAGGTATGTCTAGAGGTCAGTTTGGACAGGGACAGGAACCTCTAGACATGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000634610.1 |
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