Pregenerated sensors for C3ORF85 (Homo sapiens)
Ensembl gene IDs: ENSG00000241224Ensembl transcript IDs: ENST00000467240.1, ENST00000477643.6, ENST00000479039.3, ENST00000593799.2, ENST00000616779.4, ENST00000619765.1, ENST00000622536.6
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACCAATGTAGCAGAGTCTTGCTACATTACATAGTGCCTGTCAGTTaGTACAAATCTGGTCTACAAGTAGAGGCAGGAGAGTACCTGAAA | + |
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Preference number: 1 (lower is better) Translates to: NQCSRVLLHYIVPVS*YKSGLQVEAGEYLK Trigger: TTTCAGGTACTCTCCTGCCTCTACTTGTAGACCAGATTTGTACCAACTGACAGGCACTATGTAATGTAGCAAGACTCTGCTACATTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616779.4 |
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| 3UTR CCA 90 bp | CAGAGTCTTGCTACATTACATAGTGCCTGTCAGTTGGTACAAATCTaGTCTACAAGTAGAGGCAGGAGAGTACCTGAAAATGTCAACATT | + |
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Preference number: 1 (lower is better) Translates to: QSLATLHSACQLVQI*STSRGRRVPENVNI Trigger: AATGTTGACATTTTCAGGTACTCTCCTGCCTCTACTTGTAGACCAGATTTGTACCAACTGACAGGCACTATGTAATGTAGCAAGACTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616779.4 |
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| 3UTR GCA 90 bp | AGTAGACATGTCAAAGGTGAAGGTATTCATATCCAAATAATACTGTaGTGTTGTTTTCAAAGCAATCCATGTTTCACGAGCCTTCAAGAA | + |
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Preference number: 1 (lower is better) Translates to: SRHVKGEGIHIQIIL*CCFQSNPCFTSLQE Trigger: TTCTTGAAGGCTCGTGAAACATGGATTGCTTTGAAAACAACAGCACAGTATTATTTGGATATGAATACCTTCACCTTTGACATGTCTACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619765.1 |
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| 3UTR CAA 90 bp | AGTAAACAGCATGGATATACCCTCAGATCTCTAAAACCCATGGTTTaGGCACAATGCCATTCCAACCTCTGCCATCTTCATCCTCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: SKQHGYTLRSLKPMV*AQCHSNLCHLHPPA Trigger: AGCAGGAGGATGAAGATGGCAGAGGTTGGAATGGCATTGTGCCAAAACCATGGGTTTTAGAGATCTGAGGGTATATCCATGCTGTTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593799.2 ENST00000619765.1 ENST00000622536.6 |
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| 3UTR-3UTR GCA 90 bp | GATGGGAAATGTGAAACACTGAGCAGCTGTCAGTGTCCTTTTGGAGAAGAAATTATGGTTTTGGCACAATaGCATTCCAACCTCTGCCAT | + |
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Preference number: 2 (lower is better) Translates to: DGKCETLSSCQCPFGEEIMVLAQ*HSNLCH Trigger: ATGGCAGAGGTTGGAATGGCATTGTGCCAAAACCAT...AATTTCTTCTCCAAAAGGACACTGACAGCTGCTCAGTGTTTCACATTTCCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622536.6 |
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| 3UTR-3UTR TCA 90 bp | GATGGGAAATGTGAAACACTGAGCAGCTGTCAGTGTCCTTTTGGAGAAGAAATTGTGAATGACTTCCATTaGGTTCCTAGCCACTATCTA | + |
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Preference number: 2 (lower is better) Translates to: DGKCETLSSCQCPFGEEIVNDFH*VPSHYL Trigger: TAGATAGTGGCTAGGAACTCAATGGAAGTCATTCAC...AATTTCTTCTCCAAAAGGACACTGACAGCTGCTCAGTGTTTCACATTTCCCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622536.6 |
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| 3UTR-3UTR TCA 90 bp | AAATGTGAAACACTGAGCAGCTGTCAGTGTCCTTTTGGAGAAGAAATTGCTGAGAATGTGCCTGGCCAGTaGGTCAAAACTGTTATTTCA | + |
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Preference number: 2 (lower is better) Translates to: KCETLSSCQCPFGEEIAENVPGQ*VKTVIS Trigger: TGAAATAACAGTTTTGACTCACTGGCCAGGCACATT...CTCAGCAATTTCTTCTCCAAAAGGACACTGACAGCTGCTCAGTGTTTCACATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622536.6 |
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| 3UTR-3UTR TCA 90 bp | ACTGACTTAAGAATGCGACAAGCACTGAAGAAGAGAGAAGAGGATCAGCTCCATACAAGTCATGATCTCTaGGTGTGTAGAACACATCTT | + |
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Preference number: 2 (lower is better) Translates to: TDLRMRQALKKREEDQLHTSHDL*VCRTHL Trigger: AAGATGTGTTCTACACACTCAGAGATCATGACTTGT...ATGGAGCTGATCCTCTTCTCTCTTCTTCAGTGCTTGTCGCATTCTTAAGTCAGT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619765.1 |
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| 3UTR-3UTR GCA 90 bp | ACTGACTTAAGAATGCGACAAGCACTGAAGAAGAGAGAAGAGGATCAGCTCCATCCATCTTCATCCTCCTaGTTTAACCAGGAAAACATA | + |
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Preference number: 2 (lower is better) Translates to: TDLRMRQALKKREEDQLHPSSSS*FNQENI Trigger: TATGTTTTCCTGGTTAAAGCAGGAGGATGAAGATGG...ATGGAGCTGATCCTCTTCTCTCTTCTTCAGTGCTTGTCGCATTCTTAAGTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000619765.1 ENST00000622536.6 |
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| 3UTR CAA 90 bp | TTACAGTATTTGTGGGGCCACAGTATAAACCAATGTAGCAGAGTCTaGCTACATTACATAGTGCCTGTCAGTTGGTACAAATCTGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: LQYLWGHSINQCSRV*LHYIVPVSWYKSGL Trigger: TAGACCAGATTTGTACCAACTGACAGGCACTATGTAATGTAGCAAGACTCTGCTACATTGGTTTATACTGTGGCCCCACAAATACTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616779.4 |
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| 3UTR-3UTR TCA 90 bp | AGTCTTGCTACATTACATAGTGCCTGTCAGTTGGTACAAATCTGGTCTACAAGTAAGATCAAGGCCCCATaGAAACAAGGACATTCAACT | + |
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Preference number: 2 (lower is better) Translates to: SLATLHSACQLVQIWSTSKIKAP*KQGHST Trigger: AGTTGAATGTCCTTGTTTTCATGGGGCCTTGATCTT...ACTTGTAGACCAGATTTGTACCAACTGACAGGCACTATGTAATGTAGCAAGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616779.4 |
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| 3UTR-3UTR TCA 90 bp | TTAGCCTTAAATTTCTCACTGAAAACACCTCTAGGCCATAGGATGGGAAATGTGGGTTTTAAAATCGACTaGCTTAAGAATGCGACAAGC | + |
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Preference number: 2 (lower is better) Translates to: LALNFSLKTPLGHRMGNVGFKID*LKNATS Trigger: GCTTGTCGCATTCTTAAGTCAGTCGATTTTAAAACC...CACATTTCCCATCCTATGGCCTAGAGGTGTTTTCAGTGAGAAATTTAAGGCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000622536.6 |
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| 3UTR-3UTR TCA 90 bp | TTAGCCTTAAATTTCTCACTGAAAACACCTCTAGGCCATAGGATGGGAAATGTGGTTTGCACTTACAAGTaGATGACTTCCATTGAGTTC | + |
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Preference number: 2 (lower is better) Translates to: LALNFSLKTPLGHRMGNVVCTYK*MTSIEF Trigger: GAACTCAATGGAAGTCATTCACTTGTAAGTGCAAAC...CACATTTCCCATCCTATGGCCTAGAGGTGTTTTCAGTGAGAAATTTAAGGCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622536.6 |
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| 3UTR-3UTR CAA 90 bp | TTAGCCTTAAATTTCTCACTGAAAACACCTCTAGGCCATAGGATGGGAAATGTGGAGGATCAGCTCCATTaGAGAGCTCCCTGTCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: LALNFSLKTPLGHRMGNVEDQLH*RAPCPS Trigger: AGAAGGACAGGGAGCTCTCAAATGGAGCTGATCCTC...CACATTTCCCATCCTATGGCCTAGAGGTGTTTTCAGTGAGAAATTTAAGGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622536.6 |
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| 3UTR CCA 72 bp | AGCAGAGTCTTGCTACATTACATAGTGCCTGTCAGTTaGTACAAATCTGGTCTACAAGTAGAGGCAGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: SRVLLHYIVPVS*YKSGLQVEAGE Trigger: CTCTCCTGCCTCTACTTGTAGACCAGATTTGTACCAACTGACAGGCACTATGTAATGTAGCAAGACTCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616779.4 |
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| 3UTR-3UTR CAA 90 bp | GATGGGAAATGTGAAACACTGAGCAGCTGTCAGTGTCCTTTTGGAGAAGAAATTCTAAAACCCATGGTTTaGGCACAATGCCATTCCAAC | + |
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Preference number: 3 (lower is better) Translates to: DGKCETLSSCQCPFGEEILKPMV*AQCHSN Trigger: GTTGGAATGGCATTGTGCCAAAACCATGGGTTTTAG...AATTTCTTCTCCAAAAGGACACTGACAGCTGCTCAGTGTTTCACATTTCCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622536.6 |
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| 3UTR CCA 72 bp | GCTACATTACATAGTGCCTGTCAGTTGGTACAAATCTaGTCTACAAGTAGAGGCAGGAGAGTACCTGAAAAT | + |
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Preference number: 3 (lower is better) Translates to: ATLHSACQLVQI*STSRGRRVPEN Trigger: ATTTTCAGGTACTCTCCTGCCTCTACTTGTAGACCAGATTTGTACCAACTGACAGGCACTATGTAATGTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616779.4 |
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| 3UTR-3UTR CAA 90 bp | AAATGTGAAACACTGAGCAGCTGTCAGTGTCCTTTTGGAGAAGAAATTGCTGAGAAACTTGGAAGAAGTTaGCACTTACAAGTGAATGAC | + |
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Preference number: 3 (lower is better) Translates to: KCETLSSCQCPFGEEIAEKLGRS*HLQVND Trigger: GTCATTCACTTGTAAGTGCAAACTTCTTCCAAGTTT...CTCAGCAATTTCTTCTCCAAAAGGACACTGACAGCTGCTCAGTGTTTCACATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622536.6 |
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| 3UTR CCA 72 bp | AAATTGCTGAGGCCAAAGTCCTTCCAGTCAACTTCTTaGCATTTGGTTTTTCTGATTTACTTGCCACTCAAA | + |
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Preference number: 3 (lower is better) Translates to: KLLRPKSFQSTS*HLVFLIYLPLK Trigger: TTTGAGTGGCAAGTAAATCAGAAAAACCAAATGCCAAGAAGTTGACTGGAAGGACTTTGGCCTCAGCAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000622536.6 |
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| CDS-3UTR TCA 90 bp | AACCCATGGTTTTGGCACAATGCCATTCCAACCTCTGCCATCTTCATCCTCCTGGTTTACCCACACATCTaGACTGTGATCTGGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: NPWFWHNAIPTSAIFILLVYPHI*TVIWVP Trigger: TGGGACCCAGATCACAGTTCAGATGTGTGGGTAAAC...CAGGAGGATGAAGATGGCAGAGGTTGGAATGGCATTGTGCCAAAACCATGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000619765.1 ENST00000622536.6 |
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| CDS-3UTR TCA 90 bp | AAAACCCATGGTTTTGGCACAATGCCATTCCAACCTCTGCCATCTTCATCCTCCTTTCACGAGCACATCTaGACTGTGATCTGGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: KTHGFGTMPFQPLPSSSSFHEHI*TVIWVP Trigger: TGGGACCCAGATCACAGTTCAGATGTGCTCGTGAAA...GGAGGATGAAGATGGCAGAGGTTGGAATGGCATTGTGCCAAAACCATGGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593799.2 |
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| CDS-3UTR CCA 90 bp | AACCCATGGTTTTGGCACAATGCCATTCCAACCTCTGCCATCTTCATCCTCCTGTTGAGACGTAGGAACTaGTTTGCAGGGTCTTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: NPWFWHNAIPTSAIFILLLRRRN*FAGSSN Trigger: GTTGGAAGACCCTGCAAACCAGTTCCTACGTCTCAA...CAGGAGGATGAAGATGGCAGAGGTTGGAATGGCATTGTGCCAAAACCATGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593799.2 ENST00000619765.1 ENST00000622536.6 |
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| CDS-3UTR TCA 90 bp | TCATCAGCAAGTGCAAAACAAGCAGATCCTGGTAGACCGGTTAAGACCCAGTTAGTTTACCCACACATCTaGACTGTGATCTGGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: SSASAKQADPGRPVKTQLVYPHI*TVIWVP Trigger: TGGGACCCAGATCACAGTTCAGATGTGTGGGTAAAC...TAACTGGGTCTTAACCGGTCTACCAGGATCTGCTTGTTTTGCACTTGCTGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616779.4 |
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| CDS-3UTR TCA 90 bp | AAACCCATGGTTTTGGCACAATGCCATTCCAACCTCTGCCATCTTCATCCTCCTTGGAGAAGAAATTGCTaGGGCCAAAGTCCTTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: KPMVLAQCHSNLCHLHPPWRRNC*GQSPSS Trigger: ACTGGAAGGACTTTGGCCTCAGCAATTTCTTCTCCA...AGGAGGATGAAGATGGCAGAGGTTGGAATGGCATTGTGCCAAAACCATGGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622536.6 |
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| CDS-3UTR CCA 90 bp | AAACCCATGGTTTTGGCACAATGCCATTCCAACCTCTGCCATCTTCATCCTCCTGTCTTCCAACAAAAATaGCGCTCCCAATGCTCCGAT | + |
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Preference number: 4 (lower is better) Translates to: KPMVLAQCHSNLCHLHPPVFQQK*RSQCSD Trigger: ATCGGAGCATTGGGAGCGCCATTTTTGTTGGAAGAC...AGGAGGATGAAGATGGCAGAGGTTGGAATGGCATTGTGCCAAAACCATGGGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000622536.6 |
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| CDS-3UTR CCA 90 bp | AAACCCATGGTTTTGGCACAATGCCATTCCAACCTCTGCCATCTTCATCCTCCTTTGAGACGTAGGAACTaGTTTGCAGGGTCTTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: KPMVLAQCHSNLCHLHPPLRRRN*FAGSSN Trigger: GTTGGAAGACCCTGCAAACCAGTTCCTACGTCTCAA...AGGAGGATGAAGATGGCAGAGGTTGGAATGGCATTGTGCCAAAACCATGGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593799.2 ENST00000619765.1 ENST00000622536.6 |
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| CDS-3UTR TCA 90 bp | ACTGACTTAAGAATGCGACAAGCACTGAAGAAGAGAGAAGAGGATCAGCTCCATGTTTACCCACACATCTaGACTGTGATCTGGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: TDLRMRQALKKREEDQLHVYPHI*TVIWVP Trigger: TGGGACCCAGATCACAGTTCAGATGTGTGGGTAAAC...ATGGAGCTGATCCTCTTCTCTCTTCTTCAGTGCTTGTCGCATTCTTAAGTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000619765.1 ENST00000622536.6 |
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| CDS-3UTR TCA 90 bp | AAAACCCATGGTTTTGGCACAATGCCATTCCAACCTCTGCCATCTTCATCCTCCATAGGATGGGAAATGTaGAACACTGAGCAGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: KTHGFGTMPFQPLPSSSSIGWEM*NTEQLS Trigger: TGACAGCTGCTCAGTGTTTCACATTTCCCATCCTAT...GGAGGATGAAGATGGCAGAGGTTGGAATGGCATTGTGCCAAAACCATGGGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622536.6 |
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| CDS-3UTR CCA 90 bp | TCAGCAAGTGCAAAACAAGCAGATCCTGGTAGACCGGTTAAGACCCAGTTATGTTTGAGACGTAGGAACTaGTTTGCAGGGTCTTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: SASAKQADPGRPVKTQLCLRRRN*FAGSSN Trigger: GTTGGAAGACCCTGCAAACCAGTTCCTACGTCTCAA...ACATAACTGGGTCTTAACCGGTCTACCAGGATCTGCTTGTTTTGCACTTGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616779.4 |
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| CDS-3UTR CCA 90 bp | CAGCAAGTGCAAAACAAGCAGATCCTGGTAGACCGGTTAAGACCCAGTTATGTGCAGTTGGTACAAATCTaGTCTACAAGTAGAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: QQVQNKQILVDRLRPSYVQLVQI*STSRGR Trigger: CCTGCCTCTACTTGTAGACCAGATTTGTACCAACTG...CACATAACTGGGTCTTAACCGGTCTACCAGGATCTGCTTGTTTTGCACTTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616779.4 |
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| CDS-3UTR GCA 90 bp | AACCCATGGTTTTGGCACAATGCCATTCCAACCTCTGCCATCTTCATCCTCCTGCCATCTTCATCCTCCTaGTTTAACCAGGAAAACATA | + |
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Preference number: 4 (lower is better) Translates to: NPWFWHNAIPTSAIFILLPSSSS*FNQENI Trigger: TATGTTTTCCTGGTTAAAGCAGGAGGATGAAGATGG...CAGGAGGATGAAGATGGCAGAGGTTGGAATGGCATTGTGCCAAAACCATGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000593799.2 ENST00000619765.1 ENST00000622536.6 |
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| CDS-3UTR TCA 90 bp | TTAGCCTTAAATTTCTCACTGAAAACACCTCTAGGCCATAGGATGGGAAATGTGGCATTTTATAGGCCATaGTCCTGGAAGCCCTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: LALNFSLKTPLGHRMGNVAFYRP*SWKPCE Trigger: CTCACAGGGCTTCCAGGATCATGGCCTATAAAATGC...CACATTTCCCATCCTATGGCCTAGAGGTGTTTTCAGTGAGAAATTTAAGGCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622536.6 |
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| CDS-3UTR TCA 90 bp | AAACCCATGGTTTTGGCACAATGCCATTCCAACCTCTGCCATCTTCATCCTCCTGGTTTTAAAATCGACTaGCTTAAGAATGCGACAAGC | + |
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Preference number: 4 (lower is better) Translates to: KPMVLAQCHSNLCHLHPPGFKID*LKNATS Trigger: GCTTGTCGCATTCTTAAGTCAGTCGATTTTAAAACC...AGGAGGATGAAGATGGCAGAGGTTGGAATGGCATTGTGCCAAAACCATGGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000619765.1 ENST00000622536.6 |
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| CDS-3UTR GCA 90 bp | GTAGACCGGTTAAGACCCAGTTATGTGGAGTACGGACAAGATCAAGGCCCCATGTTTATACAATCCTCATaGCTGATGATAATCAGATCC | + |
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Preference number: 4 (lower is better) Translates to: VDRLRPSYVEYGQDQGPMFIQSS*LMIIRS Trigger: GGATCTGATTATCATCAGGCATGAGGATTGTATAAA...CATGGGGCCTTGATCTTGTCCGTACTCCACATAACTGGGTCTTAACCGGTCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616779.4 |
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| CDS-3UTR GCA 90 bp | AAAACCCATGGTTTTGGCACAATGCCATTCCAACCTCTGCCATCTTCATCCTCCCCATCTTCATCCTCCTaGTTTAACCAGGAAAACATA | + |
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Preference number: 4 (lower is better) Translates to: KTHGFGTMPFQPLPSSSSPSSSS*FNQENI Trigger: TATGTTTTCCTGGTTAAAGCAGGAGGATGAAGATGG...GGAGGATGAAGATGGCAGAGGTTGGAATGGCATTGTGCCAAAACCATGGGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000593799.2 ENST00000619765.1 ENST00000622536.6 |
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| CDS-3UTR GCA 90 bp | AAACCCATGGTTTTGGCACAATGCCATTCCAACCTCTGCCATCTTCATCCTCCTCCATCTTCATCCTCCTaGTTTAACCAGGAAAACATA | + |
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Preference number: 4 (lower is better) Translates to: KPMVLAQCHSNLCHLHPPPSSSS*FNQENI Trigger: TATGTTTTCCTGGTTAAAGCAGGAGGATGAAGATGG...AGGAGGATGAAGATGGCAGAGGTTGGAATGGCATTGTGCCAAAACCATGGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000593799.2 ENST00000619765.1 ENST00000622536.6 |
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| CDS-3UTR CCA 90 bp | AACCCATGGTTTTGGCACAATGCCATTCCAACCTCTGCCATCTTCATCCTCCTGGGAAAACATATTTACTaGGCAGTAGACATGTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: NPWFWHNAIPTSAIFILLGKHIY*AVDMSK Trigger: CTTTGACATGTCTACTGCCCAGTAAATATGTTTTCC...CAGGAGGATGAAGATGGCAGAGGTTGGAATGGCATTGTGCCAAAACCATGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000593799.2 ENST00000619765.1 ENST00000622536.6 |
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| CDS-3UTR TCA 90 bp | AAACCCATGGTTTTGGCACAATGCCATTCCAACCTCTGCCATCTTCATCCTCCTAATTTACATGTCTTTTaGGACGTAGGAACTGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: KPMVLAQCHSNLCHLHPPNLHVF*DVGTGL Trigger: CAAACCAGTTCCTACGTCTCAAAAGACATGTAAATT...AGGAGGATGAAGATGGCAGAGGTTGGAATGGCATTGTGCCAAAACCATGGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000593799.2 ENST00000619765.1 ENST00000622536.6 |
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| CDS-3UTR TCA 90 bp | TCATCAGCAAGTGCAAAACAAGCAGATCCTGGTAGACCGGTTAAGACCCAGTTAAGGCAGGAGAGTACCTaGAAATGTCAACATTCTATA | + |
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Preference number: 4 (lower is better) Translates to: SSASAKQADPGRPVKTQLRQEST*KCQHSI Trigger: TATAGAATGTTGACATTTTCAGGTACTCTCCTGCCT...TAACTGGGTCTTAACCGGTCTACCAGGATCTGCTTGTTTTGCACTTGCTGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616779.4 |
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| CDS-3UTR GCA 90 bp | AGTGCAAAACAAGCAGATCCTGGTAGACCGGTTAAGACCCAGTTATGTGGAGTAATGATAATCAGATCCTaGTTAGCCAGTGTGTTTACC | + |
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Preference number: 4 (lower is better) Translates to: SAKQADPGRPVKTQLCGVMIIRS*LASVFT Trigger: GGTAAACACACTGGCTAAGCAGGATCTGATTATCAT...TACTCCACATAACTGGGTCTTAACCGGTCTACCAGGATCTGCTTGTTTTGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616779.4 |
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| CDS-3UTR CCA 90 bp | AGTGCAAAACAAGCAGATCCTGGTAGACCGGTTAAGACCCAGTTATGTGGAGTAATAGTGCCTGTCAGTTaGTACAAATCTGGTCTACAA | + |
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Preference number: 4 (lower is better) Translates to: SAKQADPGRPVKTQLCGVIVPVS*YKSGLQ Trigger: TTGTAGACCAGATTTGTACCAACTGACAGGCACTAT...TACTCCACATAACTGGGTCTTAACCGGTCTACCAGGATCTGCTTGTTTTGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616779.4 |
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| 3UTR CAA 72 bp | TTGTGGGGCCACAGTATAAACCAATGTAGCAGAGTCTaGCTACATTACATAGTGCCTGTCAGTTGGTACAAA | + |
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Preference number: 4 (lower is better) Translates to: LWGHSINQCSRV*LHYIVPVSWYK Trigger: TTTGTACCAACTGACAGGCACTATGTAATGTAGCAAGACTCTGCTACATTGGTTTATACTGTGGCCCCACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616779.4 |
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| CDS-3UTR TCA 90 bp | TTAGCCTTAAATTTCTCACTGAAAACACCTCTAGGCCATAGGATGGGAAATGTGTCCGATAAGCAATGTTaGGCACAGGACTACTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: LALNFSLKTPLGHRMGNVSDKQC*AQDYLK Trigger: CTTCAAGTAGTCCTGTGCTCAACATTGCTTATCGGA...CACATTTCCCATCCTATGGCCTAGAGGTGTTTTCAGTGAGAAATTTAAGGCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622536.6 |
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| CDS-3UTR TCA 90 bp | TCATCAGCAAGTGCAAAACAAGCAGATCCTGGTAGACCGGTTAAGACCCAGTTAAATTTACATGTCTTTTaGGACGTAGGAACTGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: SSASAKQADPGRPVKTQLNLHVF*DVGTGL Trigger: CAAACCAGTTCCTACGTCTCAAAAGACATGTAAATT...TAACTGGGTCTTAACCGGTCTACCAGGATCTGCTTGTTTTGCACTTGCTGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000616779.4 |
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| CDS-3UTR TCA 90 bp | CTCTGCCATCTTCATCCTCCTGCTTTAACCAGGAAAACATATTTACTGGGCAGTACAAGTCATGATCTCTaGGTGTGTAGAACACATCTT | + |
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Preference number: 4 (lower is better) Translates to: LCHLHPPALTRKTYLLGSTSHDL*VCRTHL Trigger: AAGATGTGTTCTACACACTCAGAGATCATGACTTGT...ACTGCCCAGTAAATATGTTTTCCTGGTTAAAGCAGGAGGATGAAGATGGCAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619765.1 |
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| CDS-3UTR TCA 90 bp | CTCTGCCATCTTCATCCTCCTGCTTTAACCAGGAAAACATATTTACTGGGCAGTGGTTTTAAAATCGACTaGCTTAAGAATGCGACAAGC | + |
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Preference number: 4 (lower is better) Translates to: LCHLHPPALTRKTYLLGSGFKID*LKNATS Trigger: GCTTGTCGCATTCTTAAGTCAGTCGATTTTAAAACC...ACTGCCCAGTAAATATGTTTTCCTGGTTAAAGCAGGAGGATGAAGATGGCAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000619765.1 |
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| CDS-3UTR GCA 90 bp | GCTTTAACCAGGAAAACATATTTACTGGGCAGTAGACATGTCAAAGGTGAAGGTATGGTTTTGGCACAATaGCATTCCAACCTCTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: ALTRKTYLLGSRHVKGEGMVLAQ*HSNLCH Trigger: ATGGCAGAGGTTGGAATGGCATTGTGCCAAAACCAT...ACCTTCACCTTTGACATGTCTACTGCCCAGTAAATATGTTTTCCTGGTTAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000593799.2 ENST00000619765.1 |
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| CDS-3UTR TCA 90 bp | TTAGCCTTAAATTTCTCACTGAAAACACCTCTAGGCCATAGGATGGGAAATGTGGTGAATGACTTCCATTaGGTTCCTAGCCACTATCTA | + |
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Preference number: 4 (lower is better) Translates to: LALNFSLKTPLGHRMGNVVNDFH*VPSHYL Trigger: TAGATAGTGGCTAGGAACTCAATGGAAGTCATTCAC...CACATTTCCCATCCTATGGCCTAGAGGTGTTTTCAGTGAGAAATTTAAGGCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622536.6 |
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| CDS-3UTR TCA 90 bp | GATGGGAAATGTGAAACACTGAGCAGCTGTCAGTGTCCTTTTGGAGAAGAAATTGTTTGCACTTACAAGTaGATGACTTCCATTGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: DGKCETLSSCQCPFGEEIVCTYK*MTSIEF Trigger: GAACTCAATGGAAGTCATTCACTTGTAAGTGCAAAC...AATTTCTTCTCCAAAAGGACACTGACAGCTGCTCAGTGTTTCACATTTCCCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622536.6 |
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| CDS-3UTR CCA 90 bp | CAACCTCTGCCATCTTCATCCTCCTGCTTTAACCAGGAAAACATATTTACTGGGGGAAAACATATTTACTaGGCAGTAGACATGTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: QPLPSSSSCFNQENIFTGGKHIY*AVDMSK Trigger: CTTTGACATGTCTACTGCCCAGTAAATATGTTTTCC...CCCAGTAAATATGTTTTCCTGGTTAAAGCAGGAGGATGAAGATGGCAGAGGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000593799.2 ENST00000619765.1 |
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| CDS-3UTR CCA 90 bp | ACTGACTTAAGAATGCGACAAGCACTGAAGAAGAGAGAAGAGGATCAGCTCCATATTATAAAATGTGCCTaGCCAGTGAGTCAAAACTGT | + |
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Preference number: 4 (lower is better) Translates to: TDLRMRQALKKREEDQLHIIKCA*PVSQNC Trigger: ACAGTTTTGACTCACTGGCCAGGCACATTTTATAAT...ATGGAGCTGATCCTCTTCTCTCTTCTTCAGTGCTTGTCGCATTCTTAAGTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622536.6 |
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| CDS-3UTR TCA 90 bp | TGCCATCTTCATCCTCCTGCTTTAACCAGGAAAACATATTTACTGGGCAGTAGAAATTTACATGTCTTTTaGGACGTAGGAACTGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: CHLHPPALTRKTYLLGSRNLHVF*DVGTGL Trigger: CAAACCAGTTCCTACGTCTCAAAAGACATGTAAATT...TCTACTGCCCAGTAAATATGTTTTCCTGGTTAAAGCAGGAGGATGAAGATGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000593799.2 ENST00000619765.1 |
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| CDS-3UTR GCA 90 bp | CATTCCAACCTCTGCCATCTTCATCCTCCTGCTTTAACCAGGAAAACATATTTATCATACAGATATTCCTaGTTAGCCAGTGTGTTTACC | + |
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Preference number: 4 (lower is better) Translates to: HSNLCHLHPPALTRKTYLSYRYS*LASVFT Trigger: GGTAAACACACTGGCTAAGCAGGAATATCTGTATGA...TAAATATGTTTTCCTGGTTAAAGCAGGAGGATGAAGATGGCAGAGGTTGGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619765.1 |
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| CDS-3UTR CCA 90 bp | AGTCTTGCTACATTACATAGTGCCTGTCAGTTGGTACAAATCTGGTCTACAAGTATTTTACAGTATTTGTaGGGCCACAGTATAAACCAA | + |
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Preference number: 4 (lower is better) Translates to: SLATLHSACQLVQIWSTSILQYL*GHSINQ Trigger: TTGGTTTATACTGTGGCCCCACAAATACTGTAAAAT...ACTTGTAGACCAGATTTGTACCAACTGACAGGCACTATGTAATGTAGCAAGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616779.4 |
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| CDS-3UTR CAA 90 bp | AACCCATGGTTTTGGCACAATGCCATTCCAACCTCTGCCATCTTCATCCTCCTGGACGTAGGAACTGGTTaGCAGGGTCTTCCAACAAAA | + |
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Preference number: 5 (lower is better) Translates to: NPWFWHNAIPTSAIFILLDVGTG*QGLPTK Trigger: TTTTGTTGGAAGACCCTGCAAACCAGTTCCTACGTC...CAGGAGGATGAAGATGGCAGAGGTTGGAATGGCATTGTGCCAAAACCATGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593799.2 ENST00000619765.1 ENST00000622536.6 |
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| CDS-3UTR CAA 90 bp | CAGCAAGTGCAAAACAAGCAGATCCTGGTAGACCGGTTAAGACCCAGTTATGTGGACGTAGGAACTGGTTaGCAGGGTCTTCCAACAAAA | + |
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Preference number: 5 (lower is better) Translates to: QQVQNKQILVDRLRPSYVDVGTG*QGLPTK Trigger: TTTTGTTGGAAGACCCTGCAAACCAGTTCCTACGTC...CACATAACTGGGTCTTAACCGGTCTACCAGGATCTGCTTGTTTTGCACTTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616779.4 |
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| CDS-3UTR CAA 90 bp | AACCCATGGTTTTGGCACAATGCCATTCCAACCTCTGCCATCTTCATCCTCCTGCTAAAACCCATGGTTTaGGCACAATGCCATTCCAAC | + |
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Preference number: 5 (lower is better) Translates to: NPWFWHNAIPTSAIFILLLKPMV*AQCHSN Trigger: GTTGGAATGGCATTGTGCCAAAACCATGGGTTTTAG...CAGGAGGATGAAGATGGCAGAGGTTGGAATGGCATTGTGCCAAAACCATGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000593799.2 ENST00000619765.1 ENST00000622536.6 |
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| CDS-3UTR CAA 90 bp | ACTGACTTAAGAATGCGACAAGCACTGAAGAAGAGAGAAGAGGATCAGCTCCATGAGGATCAGCTCCATTaGAGAGCTCCCTGTCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: TDLRMRQALKKREEDQLHEDQLH*RAPCPS Trigger: AGAAGGACAGGGAGCTCTCAAATGGAGCTGATCCTC...ATGGAGCTGATCCTCTTCTCTCTTCTTCAGTGCTTGTCGCATTCTTAAGTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000619765.1 ENST00000622536.6 |
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| CDS TCA 90 bp | CCATGTTTCACGAGCCTGCTTAGCCAGTGTGTTTACCCACACATCTaGACTGTGATCTGGGTCCCAGTAATCCTGCAAATTTACATGTCT | + |
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Preference number: 5 (lower is better) Translates to: PCFTSLLSQCVYPHI*TVIWVPVILQIYMS Trigger: AGACATGTAAATTTGCAGGATTACTGGGACCCAGATCACAGTTCAGATGTGTGGGTAAACACACTGGCTAAGCAGGCTCGTGAAACATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622536.6 |
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| CDS-3UTR CAA 90 bp | AAACCCATGGTTTTGGCACAATGCCATTCCAACCTCTGCCATCTTCATCCTCCTCTAAAACCCATGGTTTaGGCACAATGCCATTCCAAC | + |
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Preference number: 5 (lower is better) Translates to: KPMVLAQCHSNLCHLHPPLKPMV*AQCHSN Trigger: GTTGGAATGGCATTGTGCCAAAACCATGGGTTTTAG...AGGAGGATGAAGATGGCAGAGGTTGGAATGGCATTGTGCCAAAACCATGGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000593799.2 ENST00000619765.1 ENST00000622536.6 |
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| CDS-3UTR CAA 90 bp | CAACCTCTGCCATCTTCATCCTCCTGCTTTAACCAGGAAAACATATTTACTGGGGACGTAGGAACTGGTTaGCAGGGTCTTCCAACAAAA | + |
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Preference number: 5 (lower is better) Translates to: QPLPSSSSCFNQENIFTGDVGTG*QGLPTK Trigger: TTTTGTTGGAAGACCCTGCAAACCAGTTCCTACGTC...CCCAGTAAATATGTTTTCCTGGTTAAAGCAGGAGGATGAAGATGGCAGAGGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000593799.2 ENST00000619765.1 |
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| CDS-3UTR CAA 90 bp | ACTGACTTAAGAATGCGACAAGCACTGAAGAAGAGAGAAGAGGATCAGCTCCATGACGTAGGAACTGGTTaGCAGGGTCTTCCAACAAAA | + |
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Preference number: 5 (lower is better) Translates to: TDLRMRQALKKREEDQLHDVGTG*QGLPTK Trigger: TTTTGTTGGAAGACCCTGCAAACCAGTTCCTACGTC...ATGGAGCTGATCCTCTTCTCTCTTCTTCAGTGCTTGTCGCATTCTTAAGTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000619765.1 ENST00000622536.6 |
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| CDS-3UTR CAA 90 bp | TCATCAGCAAGTGCAAAACAAGCAGATCCTGGTAGACCGGTTAAGACCCAGTTACATAGTGCCTGTCAGTaGGTACAAATCTGGTCTACA | + |
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Preference number: 5 (lower is better) Translates to: SSASAKQADPGRPVKTQLHSACQ*VQIWST Trigger: TGTAGACCAGATTTGTACCAACTGACAGGCACTATG...TAACTGGGTCTTAACCGGTCTACCAGGATCTGCTTGTTTTGCACTTGCTGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616779.4 |
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| CDS-3UTR CAA 90 bp | GCTTTAACCAGGAAAACATATTTACTGGGCAGTAGACATGTCAAAGGTGAAGGTGAGGATCAGCTCCATTaGAGAGCTCCCTGTCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: ALTRKTYLLGSRHVKGEGEDQLH*RAPCPS Trigger: AGAAGGACAGGGAGCTCTCAAATGGAGCTGATCCTC...ACCTTCACCTTTGACATGTCTACTGCCCAGTAAATATGTTTTCCTGGTTAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619765.1 |
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| CDS TCA 90 bp | GATGATAATCAGATCCTGCTTAGCCAGTGTGTTTACCCACACATCTaGACTGTGATCTGGGTCCCAGTAATCCTGCAAATTTACATGTCT | + |
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Preference number: 5 (lower is better) Translates to: DDNQILLSQCVYPHI*TVIWVPVILQIYMS Trigger: AGACATGTAAATTTGCAGGATTACTGGGACCCAGATCACAGTTCAGATGTGTGGGTAAACACACTGGCTAAGCAGGATCTGATTATCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616779.4 |
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| CDS-3UTR CAA 90 bp | ACATTACATAGTGCCTGTCAGTTGGTACAAATCTGGTCTACAAGTAGAGGCAGGCAATGTAGCAGAGTCTaGCTACATTACATAGTGCCT | + |
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Preference number: 5 (lower is better) Translates to: TLHSACQLVQIWSTSRGRQCSRV*LHYIVP Trigger: AGGCACTATGTAATGTAGCAAGACTCTGCTACATTG...CCTGCCTCTACTTGTAGACCAGATTTGTACCAACTGACAGGCACTATGTAATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616779.4 |
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| CDS-3UTR CAA 90 bp | AAAACCCATGGTTTTGGCACAATGCCATTCCAACCTCTGCCATCTTCATCCTCCAAACTTGGAAGAAGTTaGCACTTACAAGTGAATGAC | + |
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Preference number: 5 (lower is better) Translates to: KTHGFGTMPFQPLPSSSSKLGRS*HLQVND Trigger: GTCATTCACTTGTAAGTGCAAACTTCTTCCAAGTTT...GGAGGATGAAGATGGCAGAGGTTGGAATGGCATTGTGCCAAAACCATGGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622536.6 |
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| CDS-3UTR CAA 90 bp | TTAGCCTTAAATTTCTCACTGAAAACACCTCTAGGCCATAGGATGGGAAATGTGGCTGTCAGTGTCCTTTaGGAGAAGAAATTGCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: LALNFSLKTPLGHRMGNVAVSVL*EKKLLR Trigger: CCTCAGCAATTTCTTCTCCAAAAGGACACTGACAGC...CACATTTCCCATCCTATGGCCTAGAGGTGTTTTCAGTGAGAAATTTAAGGCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622536.6 |
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| CDS TCA 90 bp | ATCATACAGATATTCCTGCTTAGCCAGTGTGTTTACCCACACATCTaGACTGTGATCTGGGTCCCAGTAATCCTGCAAATTTACATGTCT | + |
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Preference number: 5 (lower is better) Translates to: IIQIFLLSQCVYPHI*TVIWVPVILQIYMS Trigger: AGACATGTAAATTTGCAGGATTACTGGGACCCAGATCACAGTTCAGATGTGTGGGTAAACACACTGGCTAAGCAGGAATATCTGTATGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619765.1 |
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| CDS-3UTR CAA 90 bp | GCTACATTACATAGTGCCTGTCAGTTGGTACAAATCTGGTCTACAAGTAGAGGCGATATTTTACAGTATTaGTGGGGCCACAGTATAAAC | + |
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Preference number: 5 (lower is better) Translates to: ATLHSACQLVQIWSTSRGDILQY*WGHSIN Trigger: GTTTATACTGTGGCCCCACAAATACTGTAAAATATC...GCCTCTACTTGTAGACCAGATTTGTACCAACTGACAGGCACTATGTAATGTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000616779.4 |
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| CDS GCA 90 bp | AGTAGACATGTCAAAGGTGAAGGTATTCATATCCAAATAATACTGTaGTGTTGTTTTCAAAGCAATCCATGTTTCACGAGCCTGCTTAGC | + |
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Preference number: 5 (lower is better) Translates to: SRHVKGEGIHIQIIL*CCFQSNPCFTSLLS Trigger: GCTAAGCAGGCTCGTGAAACATGGATTGCTTTGAAAACAACAGCACAGTATTATTTGGATATGAATACCTTCACCTTTGACATGTCTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622536.6 |
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| CDS-3UTR CAA 90 bp | AAAACATATTTACTGGGCAGTAGACATGTCAAAGGTGAAGGTATTCATATCCAACTAAAACCCATGGTTTaGGCACAATGCCATTCCAAC | + |
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Preference number: 5 (lower is better) Translates to: KTYLLGSRHVKGEGIHIQLKPMV*AQCHSN Trigger: GTTGGAATGGCATTGTGCCAAAACCATGGGTTTTAG...TTGGATATGAATACCTTCACCTTTGACATGTCTACTGCCCAGTAAATATGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000593799.2 ENST00000619765.1 |
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| CDS TCA 90 bp | ATGTTTCACGAGCCTTCAAGAAAAGGAAACACAAGTCATGATCTCTaGGTGTGTAGAACACATCTTGCATCAGTTATTCTGATTATCATA | + |
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Preference number: 5 (lower is better) Translates to: MFHEPSRKGNTSHDL*VCRTHLASVILIII Trigger: TATGATAATCAGAATAACTGATGCAAGATGTGTTCTACACACTCAGAGATCATGACTTGTGTTTCCTTTTCTTGAAGGCTCGTGAAACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000467240.1 ENST00000479039.3 ENST00000619765.1 |
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| CDS GCA 90 bp | AGTAGACATGTCAAAGGTGAAGGTATTCATATCCAAATAATACTGTaGTGTTGTTTTCAAAGCAATCCATGTTTCACGAGCACATCTGAA | + |
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Preference number: 5 (lower is better) Translates to: SRHVKGEGIHIQIIL*CCFQSNPCFTSTSE Trigger: TTCAGATGTGCTCGTGAAACATGGATTGCTTTGAAAACAACAGCACAGTATTATTTGGATATGAATACCTTCACCTTTGACATGTCTACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593799.2 |
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| CDS TCA 72 bp | ACGAGCCTGCTTAGCCAGTGTGTTTACCCACACATCTaGACTGTGATCTGGGTCCCAGTAATCCTGCAAATT | + |
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Preference number: 6 (lower is better) Translates to: TSLLSQCVYPHI*TVIWVPVILQI Trigger: AATTTGCAGGATTACTGGGACCCAGATCACAGTTCAGATGTGTGGGTAAACACACTGGCTAAGCAGGCTCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622536.6 |
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| CDS TCA 72 bp | CAGATCCTGCTTAGCCAGTGTGTTTACCCACACATCTaGACTGTGATCTGGGTCCCAGTAATCCTGCAAATT | + |
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Preference number: 6 (lower is better) Translates to: QILLSQCVYPHI*TVIWVPVILQI Trigger: AATTTGCAGGATTACTGGGACCCAGATCACAGTTCAGATGTGTGGGTAAACACACTGGCTAAGCAGGATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616779.4 |
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| CDS TCA 72 bp | CAAAAATGGCGCTCCCAATGCTCCGATAAGCAATGTTaGGCACAGGACTACTTGAAGCATTTTATAGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: QKWRSQCSDKQC*AQDYLKHFIGH Trigger: ATGGCCTATAAAATGCTTCAAGTAGTCCTGTGCTCAACATTGCTTATCGGAGCATTGGGAGCGCCATTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000467240.1 ENST00000622536.6 |
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| CDS TCA 72 bp | AAATACCTGCTTAGCCAGTGTGTTTACCCACACATCTaGACTGTGATCTGGGTCCCAGTAATCCTGCAAATT | + |
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Preference number: 6 (lower is better) Translates to: KYLLSQCVYPHI*TVIWVPVILQI Trigger: AATTTGCAGGATTACTGGGACCCAGATCACAGTTCAGATGTGTGGGTAAACACACTGGCTAAGCAGGTATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467240.1 |
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| CDS TCA 72 bp | ATATTCCTGCTTAGCCAGTGTGTTTACCCACACATCTaGACTGTGATCTGGGTCCCAGTAATCCTGCAAATT | + |
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Preference number: 6 (lower is better) Translates to: IFLLSQCVYPHI*TVIWVPVILQI Trigger: AATTTGCAGGATTACTGGGACCCAGATCACAGTTCAGATGTGTGGGTAAACACACTGGCTAAGCAGGAATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619765.1 |
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| CDS TCA 72 bp | AAAGCAATCCATGTTTCACGAGCCGATAAGCAATGTTaGGCACAGGACTACTTGAAGCATTTTATAGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: KAIHVSRADKQC*AQDYLKHFIGH Trigger: ATGGCCTATAAAATGCTTCAAGTAGTCCTGTGCTCAACATTGCTTATCGGCTCGTGAAACATGGATTGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477643.6 |
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| CDS TCA 72 bp | GAGCCTTCAAGAAAAGGAAACACAAGTCATGATCTCTaGGTGTGTAGAACACATCTTGCATCAGTTATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: EPSRKGNTSHDL*VCRTHLASVIL Trigger: CAGAATAACTGATGCAAGATGTGTTCTACACACTCAGAGATCATGACTTGTGTTTCCTTTTCTTGAAGGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000467240.1 ENST00000479039.3 ENST00000619765.1 |
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| CDS GCA 72 bp | AATGGTGAAGGACCATTTGTTTCTAATACAAATACCTaGTTAGCCAGTGTGTTTACCCACACATCTGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: NGEGPFVSNTNT*LASVFTHTSEL Trigger: CAGTTCAGATGTGTGGGTAAACACACTGGCTAAGCAGGTATTTGTATTAGAAACAAATGGTCCTTCACCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467240.1 |
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| CDS TCA 72 bp | TCTGAGTGTGTAGAACACATCTTGCATCAGTTATTCTaGTTATCATACAGATATTCCTGCTTAGCCAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SECVEHILHQLF*LSYRYSCLASV Trigger: CACACTGGCTAAGCAGGAATATCTGTATGATAATCAGAATAACTGATGCAAGATGTGTTCTACACACTCAGA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619765.1 |
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| CDS GCA 72 bp | GGACATTCAACTTTTTATGACTTTATACAATCCTCATaGCTGATGATAATCAGATCCTGCTTAGCCAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: GHSTFYDFIQSS*LMIIRSCLASV Trigger: CACACTGGCTAAGCAGGATCTGATTATCATCAGGCATGAGGATTGTATAAAGTCATAAAAAGTTGAATGTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000616779.4 |
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