RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C3ORF18 (Homo sapiens)

Ensembl gene IDs: ENSG00000088543

Ensembl transcript IDs: ENST00000357203.8, ENST00000422619.1, ENST00000426034.5, ENST00000430746.5, ENST00000441239.5, ENST00000449241.5, ENST00000464080.5, ENST00000485902.1, ENST00000486175.5, ENST00000491269.1

Found 590 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGATGGCATTGGCCACATCGGTAAACACCAGCCGGCTGGGTCTCTaGAGTGGGCCCTGGGAGGGCAGAGTAGTCTTGCCCTGCATGGCC +
Preference number: 1 (lower is better)
Translates to: WMALATSVNTSRLGL*SGPWEGRVVLPCMA
Trigger: GGCCATGCAGGGCAAGACTACTCTGCCCTCCCAGGGCCCACTGCAGAGACCCAGCCGGCTGGTGTTTACCGATGTGGCCAATGCCATCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430746.5
3UTR TCA 90 bp TCTGCATACACTACCCCTGCATCCCCTCCAGCCAGCAGCGGACAGTaGCGGTGGAGAGGCTGGGCACGGGACATGCCTCTGTGCATGCTT +
Preference number: 1 (lower is better)
Translates to: SAYTTPASPPASSGQ*RWRGWARDMPLCML
Trigger: AAGCATGCACAGAGGCATGTCCCGTGCCCAGCCTCTCCACCGTCACTGTCCGCTGCTGGCTGGAGGGGATGCAGGGGTAGTGTATGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR GCA 90 bp GCAGCCTGTACAGAGGCGGCGTCCCGCCCATGCTCCAGCAGCTCCTaGTCCAACTCATCTTGTTCCTCCGTGGGGTCGAAGTTGTACATG +
Preference number: 1 (lower is better)
Translates to: AACTEAASRPCSSSS*SNSSCSSVGSKLYM
Trigger: CATGTACAACTTCGACCCCACGGAGGAACAAGATGAGTTGGAGCAGGAGCTGCTGGAGCATGGGCGGGACGCCGCCTCTGTACAGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430746.5
3UTR TCA 90 bp GTCTGTCTCTGCCCAATGGCTTGCCAGGACCCCTGGTATCAGCCCTaGCCCTCCAAGGCTTATGGAGAGGCCAAGTGCAGGGACCCATCT +
Preference number: 1 (lower is better)
Translates to: VCLCPMACQDPWYQP*PSKAYGEAKCRDPS
Trigger: AGATGGGTCCCTGCACTTGGCCTCTCCATAAGCCTTGGAGGGTCAGGGCTGATACCAGGGGTCCTGGCAAGCCATTGGGCAGAGACAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR CCA 90 bp TGCCAAGGATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATaGATGGACCCTGGGTGTGAATTGCCCTTCTCCTGGCATCCTTGC +
Preference number: 1 (lower is better)
Translates to: CQGWVAGRPPGPSVV*MDPGCELPFSWHPC
Trigger: GCAAGGATGCCAGGAGAAGGGCAATTCACACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCATCCTTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR CCA 90 bp AGCTCCCATCCTAGCTTGGCCCCAGTAACATCTGGTTGCCAAGGATaGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGAC +
Preference number: 1 (lower is better)
Translates to: SSHPSLAPVTSGCQG*VAGRPPGPSVVWMD
Trigger: GTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCATCCTTGGCAACCAGATGTTACTGGGGCCAAGCTAGGATGGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR CCA 90 bp CTGATGCTCCACTACATACCATGGGGTAGAGGTCGACTTGGAGGGTaGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTGGGACA +
Preference number: 1 (lower is better)
Translates to: LMLHYIPWGRGRLGG*GQCGQSHSARCAGT
Trigger: TGTCCCAGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTACCCCATGGTATGTAGTGGAGCATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR CCA 90 bp AGGGAGCCGTTTTCAGAAGCAGGTGAGCCCAGTGAAACAATGCAGTaGAGAGAGGAACCGTGCTGTGCGTGCTTCCCTCTTCCCTGCAGT +
Preference number: 1 (lower is better)
Translates to: REPFSEAGEPSETMQ*REEPCCACFPLPCS
Trigger: ACTGCAGGGAAGAGGGAAGCACGCACAGCACGGTTCCTCTCTCCACTGCATTGTTTCACTGGGCTCACCTGCTTCTGAAAACGGCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR TCA 90 bp TGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGTaGATTGCCCTTCTCCTGGCATCCTTGCATACTGGACAGTTTCAG +
Preference number: 1 (lower is better)
Translates to: WETSWTLRSMDGPWV*IALLLASLHTGQFQ
Trigger: CTGAAACTGTCCAGTATGCAAGGATGCCAGGAGAAGGGCAATTCACACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR GCA 90 bp GTATGGATGGACCCTGGGTGTGAATTGCCCTTCTCCTGGCATCCTTaGATACTGGACAGTTTCAGCTCCATCTCTGGGCTTCTCAGGGCC +
Preference number: 1 (lower is better)
Translates to: VWMDPGCELPFSWHP*ILDSFSSISGLLRA
Trigger: GGCCCTGAGAAGCCCAGAGATGGAGCTGAAACTGTCCAGTATGCAAGGATGCCAGGAGAAGGGCAATTCACACCCAGGGTCCATCCATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR GCA 90 bp AAGACAGGGAGCCGTTTTCAGAAGCAGGTGAGCCCAGTGAAACAATaGAGTGGAGAGAGGAACCGTGCTGTGCGTGCTTCCCTCTTCCCT +
Preference number: 1 (lower is better)
Translates to: KTGSRFQKQVSPVKQ*SGERNRAVRASLFP
Trigger: AGGGAAGAGGGAAGCACGCACAGCACGGTTCCTCTCTCCACTGCATTGTTTCACTGGGCTCACCTGCTTCTGAAAACGGCTCCCTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR TCA 90 bp TCAGCCCTCTTGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTaGCAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCT +
Preference number: 1 (lower is better)
Translates to: SALLCLGREDLQSRS*QSGSGELCRHRDGS
Trigger: AGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACAAGAGGGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
3UTR TCA 90 bp TGGAGAGGCCAAGTGCAGGGACCCATCTCCCCACTCTCTAAACACTaGACGGCTCTTCCCATAGATGGGATGGAGGTGGGGAATTCAAAC +
Preference number: 1 (lower is better)
Translates to: WRGQVQGPISPLSKH*TALPIDGMEVGNSN
Trigger: GTTTGAATTCCCCACCTCCATCCCATCTATGGGAAGAGCCGTTCAGTGTTTAGAGAGTGGGGAGATGGGTCCCTGCACTTGGCCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR TCA 90 bp TCTCACGTGGAGCTGCTCTGGGTTAAATTACAGCTGTATGCATCCTaGATTCCTGGCAGCCTCCAGTCGACTCAAGTGCTAACGTATTTA +
Preference number: 1 (lower is better)
Translates to: SHVELLWVKLQLYAS*IPGSLQSTQVLTYL
Trigger: TAAATACGTTAGCACTTGAGTCGACTGGAGGCTGCCAGGAATTCAGGATGCATACAGCTGTAATTTAACCCAGAGCAGCTCCACGTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR GCA 90 bp CCATGTAAACATCTTCATTACATCTTTAATGCTCTCACGTGGAGCTaGTCTGGGTTAAATTACAGCTGTATGCATCCTGAATTCCTGGCA +
Preference number: 1 (lower is better)
Translates to: PCKHLHYIFNALTWS*SGLNYSCMHPEFLA
Trigger: TGCCAGGAATTCAGGATGCATACAGCTGTAATTTAACCCAGAGCAGCTCCACGTGAGAGCATTAAAGATGTAATGAAGATGTTTACATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357203.8
ENST00000426034.5
3UTR-3UTR GCA 90 bp AGGATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGAGGGATGCCCTCTGTaGCAGGGCCCTCAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: RMGGWETSWTLRSMDGPWEGCPL*QGPQVR
Trigger: CCTGACCTGAGGGCCCTGGCACAGAGGGCATCCCTC...CCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCATCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR TCA 90 bp AGGATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGGGCAGACCCTGATGTaGGGGATCTGGACAGGGGAT +
Preference number: 2 (lower is better)
Translates to: RMGGWETSWTLRSMDGPWGQTLM*GIWTGD
Trigger: ATCCCCTGTCCAGATCCCTCACATCAGGGTCTGCCC...CCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCATCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR TCA 90 bp CCCTGCATGGCCTGCACAGAAGTAGCAGCCTGTACAGAGGCGGCGTCCCGCCCACTTCAGAGTAGGTCTTaGCAATCAGGGAGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: PCMACTEVAACTEAASRPLQSRS*QSGSGE
Trigger: CTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAG...TGGGCGGGACGCCGCCTCTGTACAGGCTGCTACTTCTGTGCAGGCCATGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430746.5
3UTR-3UTR TCA 90 bp GCTGCCCTACCCTGTCCCTATAACTTGGGTGGTTTCCTCTCCCCACCCCAGAGGGGGCAGACCCTGATGTaGGGGATCTGGACAGGGGAT +
Preference number: 2 (lower is better)
Translates to: AALPCPYNLGGFLSPPQRGQTLM*GIWTGD
Trigger: ATCCCCTGTCCAGATCCCTCACATCAGGGTCTGCCC...CCTCTGGGGTGGGGAGAGGAAACCACCCAAGTTATAGGGACAGGGTAGGGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR GCA 90 bp GGTCAGGAGAAGTCAGTGGTCAGAAGTCCAGCCTGGCTAGGGCCCTCTCTTAGAGAGGGATGCCCTCTGTaGCAGGGCCCTCAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: GQEKSVVRSPAWLGPSLREGCPL*QGPQVR
Trigger: CCTGACCTGAGGGCCCTGGCACAGAGGGCATCCCTC...TCTAAGAGAGGGCCCTAGCCAGGCTGGACTTCTGACCACTGACTTCTCCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR GCA 90 bp TGTGGACAATCTCATTCTGCCCGCTGTGCTGGGACAGGCACATGTCTGCCCATGGAGGGATGCCCTCTGTaGCAGGGCCCTCAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: CGQSHSARCAGTGTCLPMEGCPL*QGPQVR
Trigger: CCTGACCTGAGGGCCCTGGCACAGAGGGCATCCCTC...CATGGGCAGACATGTGCCTGTCCCAGCACAGCGGGCAGAATGAGATTGTCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp CTGCTCTTGTGGTCTGTCTCTGCCCAATGGCTTGCCAGGACCCCTGGTATCAGCCCAAGGATGGGTGGCTaGGAGACCTCCTGGACCCTC +
Preference number: 2 (lower is better)
Translates to: LLLWSVSAQWLARTPGISPRMGG*ETSWTL
Trigger: GAGGGTCCAGGAGGTCTCCCAGCCACCCATCCTTGG...GCTGATACCAGGGGTCCTGGCAAGCCATTGGGCAGAGACAGACCACAAGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp TCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTGGGTTGCCAAGGATGGGTaGCTGGGAGACCTCCTGGAC +
Preference number: 2 (lower is better)
Translates to: STWRVGPVWTISFCPLCWVAKDG*LGDLLD
Trigger: GTCCAGGAGGTCTCCCAGCCACCCATCCTTGGCAAC...CCAGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR TCA 90 bp CCTGACCCTCCAAGGCTTATGGAGAGGCCAAGTGCAGGGACCCATCTCCCCACTACTCATGCACATGCATaGGGCCTCTCGGCAGGTCTG +
Preference number: 2 (lower is better)
Translates to: PDPPRLMERPSAGTHLPTTHAHA*GLSAGL
Trigger: CAGACCTGCCGAGAGGCCTCATGCATGTGCATGAGT...AGTGGGGAGATGGGTCCCTGCACTTGGCCTCTCCATAAGCCTTGGAGGGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR TCA 90 bp GCCCTGCATGGCCTGCACAGAAGTAGCAGCCTGTACAGAGGCGGCGTCCCGCCCGCCTCTTCTTCTTCCTaGTGTACAAAACCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: ALHGLHRSSSLYRGGVPPASSSS*CTKPVA
Trigger: AGCCACAGGTTTTGTACATCAGGAAGAAGAAGAGGC...GGGCGGGACGCCGCCTCTGTACAGGCTGCTACTTCTGTGCAGGCCATGCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430746.5
3UTR-3UTR CCA 90 bp ATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGGTCAGAAGTCCAGCCTaGCTAGGGCCCTCTCTTAGA +
Preference number: 2 (lower is better)
Translates to: MGGWETSWTLRSMDGPWVVRSPA*LGPSLR
Trigger: TCTAAGAGAGGGCCCTAGCCAGGCTGGACTTCTGAC...CACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp GCCCTGGGAGGGCAGAGTAGTCTTGCCCTGCATGGCCTGCACAGAAGTAGCAGCGTCAGAAGTCCAGCCTaGCTAGGGCCCTCTCTTAGA +
Preference number: 2 (lower is better)
Translates to: ALGGQSSLALHGLHRSSSVRSPA*LGPSLR
Trigger: TCTAAGAGAGGGCCCTAGCCAGGCTGGACTTCTGAC...GCTGCTACTTCTGTGCAGGCCATGCAGGGCAAGACTACTCTGCCCTCCCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430746.5
3UTR-3UTR CCA 90 bp CCTGACCCTCCAAGGCTTATGGAGAGGCCAAGTGCAGGGACCCATCTCCCCACTGGCTGGGAGACCTCCTaGACCCTCCGTAGTATGGAT +
Preference number: 2 (lower is better)
Translates to: PDPPRLMERPSAGTHLPTGWETS*TLRSMD
Trigger: ATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCC...AGTGGGGAGATGGGTCCCTGCACTTGGCCTCTCCATAAGCCTTGGAGGGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp CTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGATGTGAGGGATCTGGACCCAAGGATGGGTGGCTaGGAGACCTCCTGGACCCTC +
Preference number: 2 (lower is better)
Translates to: LPHFLHISGADPDVRDLDPRMGG*ETSWTL
Trigger: GAGGGTCCAGGAGGTCTCCCAGCCACCCATCCTTGG...GTCCAGATCCCTCACATCAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp TCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTGGGGCCCCAGTAACATCTaGTTGCCAAGGATGGGTGGC +
Preference number: 2 (lower is better)
Translates to: STWRVGPVWTISFCPLCWGPSNI*LPRMGG
Trigger: GCCACCCATCCTTGGCAACCAGATGTTACTGGGGCC...CCAGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR TCA 90 bp AGGATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGCTTCAGAGTAGGTCTTaGCAATCAGGGAGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: RMGGWETSWTLRSMDGPWLQSRS*QSGSGE
Trigger: CTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAG...CCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR TCA 90 bp CTGGGAGGGCAGAGTAGTCTTGCCCTGCATGGCCTGCACAGAAGTAGCAGCCTGTTGACCTTCTCAGCATaGGGGATGCCCTCTGTGCCA +
Preference number: 2 (lower is better)
Translates to: LGGQSSLALHGLHRSSSLLTFSA*GMPSVP
Trigger: TGGCACAGAGGGCATCCCTCATGCTGAGAAGGTCAA...CAGGCTGCTACTTCTGTGCAGGCCATGCAGGGCAAGACTACTCTGCCCTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430746.5
3UTR-3UTR TCA 90 bp GGGCTTCCTAGGCCTTTCCCTCCTGACACATGGCATTTGCCCAGTGGAAGGTCTGATCTGGACAGGGGATaGGGAAGCCAGCAGAGGCTC +
Preference number: 2 (lower is better)
Translates to: GLPRPFPPDTWHLPSGRSDLDRG*GSQQRL
Trigger: GAGCCTCTGCTGGCTTCCTCATCCCCTGTCCAGATC...AGACCTTCCACTGGGCAAATGCCATGTGTCAGGAGGGAAAGGCCTAGGAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR TCA 90 bp TGTGGACAATCTCATTCTGCCCGCTGTGCTGGGACAGGCACATGTCTGCCCATGGGGCAGACCCTGATGTaGGGGATCTGGACAGGGGAT +
Preference number: 2 (lower is better)
Translates to: CGQSHSARCAGTGTCLPMGQTLM*GIWTGD
Trigger: ATCCCCTGTCCAGATCCCTCACATCAGGGTCTGCCC...CATGGGCAGACATGTGCCTGTCCCAGCACAGCGGGCAGAATGAGATTGTCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR TCA 90 bp ATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGGGCAGACCCTGATGTaGGGGATCTGGACAGGGGAT +
Preference number: 2 (lower is better)
Translates to: IPPTPYLPHFLHISGADPGQTLM*GIWTGD
Trigger: ATCCCCTGTCCAGATCCCTCACATCAGGGTCTGCCC...AGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR TCA 90 bp GTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTACTCATGCACATGCATaGGGCCTCTCGGCAGGTCTG +
Preference number: 2 (lower is better)
Translates to: VEVDLEGGASVDNLILPATHAHA*GLSAGL
Trigger: CAGACCTGCCGAGAGGCCTCATGCATGTGCATGAGT...AGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR GCA 90 bp CTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGATGTGAGGGATCTGGACTCTCAGCATGAGGGATaGCCTCTGTGCCAGGGCCCT +
Preference number: 2 (lower is better)
Translates to: LPHFLHISGADPDVRDLDSQHEG*PLCQGP
Trigger: AGGGCCCTGGCACAGAGGGCATCCCTCATGCTGAGA...GTCCAGATCCCTCACATCAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR GCA 90 bp CCTGACCCTCCAAGGCTTATGGAGAGGCCAAGTGCAGGGACCCATCTCCCCACTAGGGCCCATAACAGATaGTGCCCTACCCTGTCCCTA +
Preference number: 2 (lower is better)
Translates to: PDPPRLMERPSAGTHLPTRAHNR*CPTLSL
Trigger: TAGGGACAGGGTAGGGCAGCATCTGTTATGGGCCCT...AGTGGGGAGATGGGTCCCTGCACTTGGCCTCTCCATAAGCCTTGGAGGGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR GCA 90 bp CCTGACCCTCCAAGGCTTATGGAGAGGCCAAGTGCAGGGACCCATCTCCCCACTCCAGTAACATCTGGTTaGCAAGGATGGGTGGCTGGG +
Preference number: 2 (lower is better)
Translates to: PDPPRLMERPSAGTHLPTPVTSG*QGWVAG
Trigger: CCCAGCCACCCATCCTTGGCAACCAGATGTTACTGG...AGTGGGGAGATGGGTCCCTGCACTTGGCCTCTCCATAAGCCTTGGAGGGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp GGAGGGCAGAGTAGTCTTGCCCTGCATGGCCTGCACAGAAGTAGCAGCCTGTACGTCAGCAGGTGGGTCTaGAGAACAGCTAGGACCTGG +
Preference number: 2 (lower is better)
Translates to: GGQSSLALHGLHRSSSLYVSRWV*RTARTW
Trigger: CCAGGTCCTAGCTGTTCTCCAGACCCACCTGCTGAC...GTACAGGCTGCTACTTCTGTGCAGGCCATGCAGGGCAAGACTACTCTGCCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430746.5
3UTR-3UTR CCA 90 bp CCTGACCCTCCAAGGCTTATGGAGAGGCCAAGTGCAGGGACCCATCTCCCCACTGGACCCTCCGTAGTATaGATGGACCCTGGGTGTGAA +
Preference number: 2 (lower is better)
Translates to: PDPPRLMERPSAGTHLPTGPSVV*MDPGCE
Trigger: TTCACACCCAGGGTCCATCCATACTACGGAGGGTCC...AGTGGGGAGATGGGTCCCTGCACTTGGCCTCTCCATAAGCCTTGGAGGGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR TCA 90 bp TCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTGGCTTCAGAGTAGGTCTTaGCAATCAGGGAGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: STWRVGPVWTISFCPLCWLQSRS*QSGSGE
Trigger: CTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAG...CCAGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR TCA 90 bp ATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGATGGACCCTGGGTGTaGATTGCCCTTCTCCTGGCA +
Preference number: 2 (lower is better)
Translates to: IPPTPYLPHFLHISGADPDGPWV*IALLLA
Trigger: TGCCAGGAGAAGGGCAATTCACACCCAGGGTCCATC...AGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR TCA 90 bp CCTGACCCTCCAAGGCTTATGGAGAGGCCAAGTGCAGGGACCCATCTCCCCACTCTTCCCTGCAGTCCCTaGAGATTGAAGGCAGAGAAG +
Preference number: 2 (lower is better)
Translates to: PDPPRLMERPSAGTHLPTLPCSP*RLKAEK
Trigger: CTTCTCTGCCTTCAATCTTCAGGGACTGCAGGGAAG...AGTGGGGAGATGGGTCCCTGCACTTGGCCTCTCCATAAGCCTTGGAGGGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR GCA 90 bp TCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTGGACCCTGGGTGTGAATTaGCCTTCTCCTGGCATCCTT +
Preference number: 2 (lower is better)
Translates to: STWRVGPVWTISFCPLCWTLGVN*PSPGIL
Trigger: AAGGATGCCAGGAGAAGGGCAATTCACACCCAGGGT...CCAGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR GCA 90 bp TGTGGACAATCTCATTCTGCCCGCTGTGCTGGGACAGGCACATGTCTGCCCATGGCACACTCATGCACATaGATGAGGCCTCTCGGCAGG +
Preference number: 2 (lower is better)
Translates to: CGQSHSARCAGTGTCLPMAHSCT*MRPLGR
Trigger: CCTGCCGAGAGGCCTCATGCATGTGCATGAGTGTGC...CATGGGCAGACATGTGCCTGTCCCAGCACAGCGGGCAGAATGAGATTGTCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR GCA 90 bp CTGCTCTTGTGGTCTGTCTCTGCCCAATGGCTTGCCAGGACCCCTGGTATCAGCGCAGCCTGTGATTACTaGCCTCAGACCAACAGCCTC +
Preference number: 2 (lower is better)
Translates to: LLLWSVSAQWLARTPGISAACDY*PQTNSL
Trigger: GAGGCTGTTGGTCTGAGGGCAGTAATCACAGGCTGC...GCTGATACCAGGGGTCCTGGCAAGCCATTGGGCAGAGACAGACCACAAGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp CAATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCGTCAGCAGGTGGGTCTaGAGAACAGCTAGGACCTGG +
Preference number: 2 (lower is better)
Translates to: QSLPLRISLISSTLAGQTVSRWV*RTARTW
Trigger: CCAGGTCCTAGCTGTTCTCCAGACCCACCTGCTGAC...GGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp GGGCTTCCTAGGCCTTTCCCTCCTGACACATGGCATTTGCCCAGTGGAAGGTCTGTCAGCAGGTGGGTCTaGAGAACAGCTAGGACCTGG +
Preference number: 2 (lower is better)
Translates to: GLPRPFPPDTWHLPSGRSVSRWV*RTARTW
Trigger: CCAGGTCCTAGCTGTTCTCCAGACCCACCTGCTGAC...AGACCTTCCACTGGGCAAATGCCATGTGTCAGGAGGGAAAGGCCTAGGAAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp TGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGTGAATTGCCCTTCTCCTaGCATCCTTGCATACTGGAC +
Preference number: 2 (lower is better)
Translates to: WVAGRPPGPSVVWMDPGCELPFS*HPCILD
Trigger: GTCCAGTATGCAAGGATGCCAGGAGAAGGGCAATTC...ACACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp CCAGTGAAACAATGCAGTGGAGAGAGGAACCGTGCTGTGCGTGCTTCCCTCTTCGTTGCCAAGGATGGGTaGCTGGGAGACCTCCTGGAC +
Preference number: 2 (lower is better)
Translates to: PVKQCSGERNRAVRASLFVAKDG*LGDLLD
Trigger: GTCCAGGAGGTCTCCCAGCCACCCATCCTTGGCAAC...GAAGAGGGAAGCACGCACAGCACGGTTCCTCTCTCCACTGCATTGTTTCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp CCAGTGAAACAATGCAGTGGAGAGAGGAACCGTGCTGTGCGTGCTTCCCTCTTCTTCTGCCCGCTGTGCTaGGACAGGCACATGTCTGCC +
Preference number: 2 (lower is better)
Translates to: PVKQCSGERNRAVRASLFFCPLC*DRHMSA
Trigger: GGCAGACATGTGCCTGTCCCAGCACAGCGGGCAGAA...GAAGAGGGAAGCACGCACAGCACGGTTCCTCTCTCCACTGCATTGTTTCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp GAGGGCAGAGTAGTCTTGCCCTGCATGGCCTGCACAGAAGTAGCAGCCTGTACAATGGGCATGAGCTGGTaGCGTAGCTTCTCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: EGRVVLPCMACTEVAACTMGMSW*RSFSSL
Trigger: GAGGCTGGAGAAGCTACGCCACCAGCTCATGCCCAT...TGTACAGGCTGCTACTTCTGTGCAGGCCATGCAGGGCAAGACTACTCTGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430746.5
3UTR-3UTR CCA 90 bp ATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTCAGGCCACTCACGCATaGATGGCATTGGCCACATCG +
Preference number: 2 (lower is better)
Translates to: IPPTPYLPHFLHISGADPQATHA*MALATS
Trigger: CGATGTGGCCAATGCCATCCATGCGTGAGTGGCCTG...AGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430746.5
3UTR CAA 90 bp TTCTCAGGGCCCATAACAGATGCTGCCCTACCCTGTCCCTATAACTaGGGTGGTTTCCTCTCCCCACCCCAGAGGAGGCTCCAGATTCCA +
Preference number: 2 (lower is better)
Translates to: FSGPITDAALPCPYN*GGFLSPPQRRLQIP
Trigger: TGGAATCTGGAGCCTCCTCTGGGGTGGGGAGAGGAAACCACCCAAGTTATAGGGACAGGGTAGGGCAGCATCTGTTATGGGCCCTGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR TCA 90 bp CTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGATGTGAGGGATCTGGACTTGACCTTCTCAGCATaGGGGATGCCCTCTGTGCCA +
Preference number: 2 (lower is better)
Translates to: LPHFLHISGADPDVRDLDLTFSA*GMPSVP
Trigger: TGGCACAGAGGGCATCCCTCATGCTGAGAAGGTCAA...GTCCAGATCCCTCACATCAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR TCA 90 bp TGTGGACAATCTCATTCTGCCCGCTGTGCTGGGACAGGCACATGTCTGCCCATGTTGACCTTCTCAGCATaGGGGATGCCCTCTGTGCCA +
Preference number: 2 (lower is better)
Translates to: CGQSHSARCAGTGTCLPMLTFSA*GMPSVP
Trigger: TGGCACAGAGGGCATCCCTCATGCTGAGAAGGTCAA...CATGGGCAGACATGTGCCTGTCCCAGCACAGCGGGCAGAATGAGATTGTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR TCA 90 bp CAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGGTGATCTGGACAGGGGATaGGGAAGCCAGCAGAGGCTC +
Preference number: 2 (lower is better)
Translates to: QPQILIRAQDREPFSEAGDLDRG*GSQQRL
Trigger: GAGCCTCTGCTGGCTTCCTCATCCCCTGTCCAGATC...ACCTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR TCA 90 bp CCAGTGAAACAATGCAGTGGAGAGAGGAACCGTGCTGTGCGTGCTTCCCTCTTCGATGGACCCTGGGTGTaGATTGCCCTTCTCCTGGCA +
Preference number: 2 (lower is better)
Translates to: PVKQCSGERNRAVRASLFDGPWV*IALLLA
Trigger: TGCCAGGAGAAGGGCAATTCACACCCAGGGTCCATC...GAAGAGGGAAGCACGCACAGCACGGTTCCTCTCTCCACTGCATTGTTTCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR GCA 90 bp ATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGTTCTCCTGGCATCCTTaGATACTGGACAGTTTCAGC +
Preference number: 2 (lower is better)
Translates to: MGGWETSWTLRSMDGPWVFSWHP*ILDSFS
Trigger: GCTGAAACTGTCCAGTATGCAAGGATGCCAGGAGAA...CACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR GCA 90 bp CATGGGGTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCAGTAACATCTGGTTaGCAAGGATGGGTGGCTGGG +
Preference number: 2 (lower is better)
Translates to: HGVEVDLEGGASVDNLILPVTSG*QGWVAG
Trigger: CCCAGCCACCCATCCTTGGCAACCAGATGTTACTGG...CAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTACCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR GCA 90 bp CTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGATGTGAGGGATCTGGACTTGCCCTGCATGGCCTaGACAGAAGTAGCAGCCTGT +
Preference number: 2 (lower is better)
Translates to: LPHFLHISGADPDVRDLDLPCMA*TEVAAC
Trigger: ACAGGCTGCTACTTCTGTGCAGGCCATGCAGGGCAA...GTCCAGATCCCTCACATCAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430746.5
3UTR-3UTR CCA 90 bp GGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTTCTAAAGTCAGCAGGTaGGTCTGGAGAACAGCTAGG +
Preference number: 2 (lower is better)
Translates to: GRLGGWGQCGQSHSARCASKVSR*VWRTAR
Trigger: CCTAGCTGTTCTCCAGACCCACCTGCTGACTTTAGA...AGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp GGACAGGGGATGAGGAAGCCAGCAGAGGCTCTTGACCTTCTCAGCATGAGGGATGTCAGAAGTCCAGCCTaGCTAGGGCCCTCTCTTAGA +
Preference number: 2 (lower is better)
Translates to: GQGMRKPAEALDLLSMRDVRSPA*LGPSLR
Trigger: TCTAAGAGAGGGCCCTAGCCAGGCTGGACTTCTGAC...ATCCCTCATGCTGAGAAGGTCAAGAGCCTCTGCTGGCTTCCTCATCCCCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp ATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGTCAGAAGTCCAGCCTaGCTAGGGCCCTCTCTTAGA +
Preference number: 2 (lower is better)
Translates to: IPPTPYLPHFLHISGADPVRSPA*LGPSLR
Trigger: TCTAAGAGAGGGCCCTAGCCAGGCTGGACTTCTGAC...AGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp TGTGGACAATCTCATTCTGCCCGCTGTGCTGGGACAGGCACATGTCTGCCCATGGGACCCTCCGTAGTATaGATGGACCCTGGGTGTGAA +
Preference number: 2 (lower is better)
Translates to: CGQSHSARCAGTGTCLPMGPSVV*MDPGCE
Trigger: TTCACACCCAGGGTCCATCCATACTACGGAGGGTCC...CATGGGCAGACATGTGCCTGTCCCAGCACAGCGGGCAGAATGAGATTGTCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp CCAGTGAAACAATGCAGTGGAGAGAGGAACCGTGCTGTGCGTGCTTCCCTCTTCGGCTGGGAGACCTCCTaGACCCTCCGTAGTATGGAT +
Preference number: 2 (lower is better)
Translates to: PVKQCSGERNRAVRASLFGWETS*TLRSMD
Trigger: ATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCC...GAAGAGGGAAGCACGCACAGCACGGTTCCTCTCTCCACTGCATTGTTTCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp CCCAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGGGCCCCAGTAACATCTaGTTGCCAAGGATGGGTGGC +
Preference number: 2 (lower is better)
Translates to: PNPRSSLEPKTGSRFQKQGPSNI*LPRMGG
Trigger: GCCACCCATCCTTGGCAACCAGATGTTACTGGGGCC...CTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp CCAGTGAAACAATGCAGTGGAGAGAGGAACCGTGCTGTGCGTGCTTCCCTCTTCGGCCCCAGTAACATCTaGTTGCCAAGGATGGGTGGC +
Preference number: 2 (lower is better)
Translates to: PVKQCSGERNRAVRASLFGPSNI*LPRMGG
Trigger: GCCACCCATCCTTGGCAACCAGATGTTACTGGGGCC...GAAGAGGGAAGCACGCACAGCACGGTTCCTCTCTCCACTGCATTGTTTCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp CTGCTCTTGTGGTCTGTCTCTGCCCAATGGCTTGCCAGGACCCCTGGTATCAGCGGCTCTTCCCATAGATaGGATGGAGGTGGGGAATTC +
Preference number: 2 (lower is better)
Translates to: LLLWSVSAQWLARTPGISGSSHR*DGGGEF
Trigger: GAATTCCCCACCTCCATCCCATCTATGGGAAGAGCC...GCTGATACCAGGGGTCCTGGCAAGCCATTGGGCAGAGACAGACCACAAGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp CAATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCTACATGGGCATGAGCTaGTGGCGTAGCTTCTCCAGC +
Preference number: 2 (lower is better)
Translates to: QSLPLRISLISSTLAGQTYMGMS*WRSFSS
Trigger: GCTGGAGAAGCTACGCCACCAGCTCATGCCCATGTA...GGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430746.5
3UTR CAA 90 bp AGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGTGAATaGCCCTTCTCCTGGCATCCTTGCATACTGGACAGTTTCAGCTCC +
Preference number: 2 (lower is better)
Translates to: RPPGPSVVWMDPGCE*PFSWHPCILDSFSS
Trigger: GGAGCTGAAACTGTCCAGTATGCAAGGATGCCAGGAGAAGGGCAATTCACACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR TCA 90 bp ATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTCTTCAGAGTAGGTCTTaGCAATCAGGGAGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: IPPTPYLPHFLHISGADPLQSRS*QSGSGE
Trigger: CTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAG...AGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR TCA 90 bp GGGCTTCCTAGGCCTTTCCCTCCTGACACATGGCATTTGCCCAGTGGAAGGTCTCTTCAGAGTAGGTCTTaGCAATCAGGGAGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: GLPRPFPPDTWHLPSGRSLQSRS*QSGSGE
Trigger: CTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAG...AGACCTTCCACTGGGCAAATGCCATGTGTCAGGAGGGAAAGGCCTAGGAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR GCA 90 bp CAATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCACCCTGGGTGTGAATTaGCCTTCTCCTGGCATCCTT +
Preference number: 2 (lower is better)
Translates to: QSLPLRISLISSTLAGQTTLGVN*PSPGIL
Trigger: AAGGATGCCAGGAGAAGGGCAATTCACACCCAGGGT...GGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR GCA 90 bp CCAGTGAAACAATGCAGTGGAGAGAGGAACCGTGCTGTGCGTGCTTCCCTCTTCCCATGGGCACACTCATaGACATGCATGAGGCCTCTC +
Preference number: 2 (lower is better)
Translates to: PVKQCSGERNRAVRASLFPWAHS*TCMRPL
Trigger: GAGAGGCCTCATGCATGTGCATGAGTGTGCCCATGG...GAAGAGGGAAGCACGCACAGCACGGTTCCTCTCTCCACTGCATTGTTTCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR GCA 90 bp CTGCTCTTGTGGTCTGTCTCTGCCCAATGGCTTGCCAGGACCCCTGGTATCAGCAGCCCAGTGAAACAATaGAGTGGAGAGAGGAACCGT +
Preference number: 2 (lower is better)
Translates to: LLLWSVSAQWLARTPGISSPVKQ*SGERNR
Trigger: ACGGTTCCTCTCTCCACTGCATTGTTTCACTGGGCT...GCTGATACCAGGGGTCCTGGCAAGCCATTGGGCAGAGACAGACCACAAGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp TCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTGGGGCATCCTTGCATACTaGACAGTTTCAGCTCCATCT +
Preference number: 2 (lower is better)
Translates to: STWRVGPVWTISFCPLCWGILAY*TVSAPS
Trigger: AGATGGAGCTGAAACTGTCCAGTATGCAAGGATGCC...CCAGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp TCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGCATCTTGTTCCTCCGTaGGGTCGAAGTTGTACATGG +
Preference number: 2 (lower is better)
Translates to: SLPLRISLISSTLAGQTLHLVPP*GRSCTW
Trigger: CCATGTACAACTTCGACCCCACGGAGGAACAAGATG...CAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430746.5
3UTR-3UTR GCA 90 bp CCAGTGAAACAATGCAGTGGAGAGAGGAACCGTGCTGTGCGTGCTTCCCTCTTCACCCTGGGTGTGAATTaGCCTTCTCCTGGCATCCTT +
Preference number: 2 (lower is better)
Translates to: PVKQCSGERNRAVRASLFTLGVN*PSPGIL
Trigger: AAGGATGCCAGGAGAAGGGCAATTCACACCCAGGGT...GAAGAGGGAAGCACGCACAGCACGGTTCCTCTCTCCACTGCATTGTTTCACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR GCA 90 bp CAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGGTTCATTCTGCCCGCTGTaGTGGGACAGGCACATGTCT +
Preference number: 2 (lower is better)
Translates to: QPQILIRAQDREPFSEAGSFCPL*WDRHMS
Trigger: AGACATGTGCCTGTCCCAGCACAGCGGGCAGAATGA...ACCTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp GGACAGGGGATGAGGAAGCCAGCAGAGGCTCTTGACCTTCTCAGCATGAGGGATTCTAAAGTCAGCAGGTaGGTCTGGAGAACAGCTAGG +
Preference number: 2 (lower is better)
Translates to: GQGMRKPAEALDLLSMRDSKVSR*VWRTAR
Trigger: CCTAGCTGTTCTCCAGACCCACCTGCTGACTTTAGA...ATCCCTCATGCTGAGAAGGTCAAGAGCCTCTGCTGGCTTCCTCATCCCCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp GGGCTTCCTAGGCCTTTCCCTCCTGACACATGGCATTTGCCCAGTGGAAGGTCTCTCCACTACATACCATaGGGTAGAGGTCGACTTGGA +
Preference number: 2 (lower is better)
Translates to: GLPRPFPPDTWHLPSGRSLHYIP*GRGRLG
Trigger: TCCAAGTCGACCTCTACCCCATGGTATGTAGTGGAG...AGACCTTCCACTGGGCAAATGCCATGTGTCAGGAGGGAAAGGCCTAGGAAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR TCA 90 bp CAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGGTCTTCCCTGCAGTCCCTaGAGATTGAAGGCAGAGAAG +
Preference number: 2 (lower is better)
Translates to: QPQILIRAQDREPFSEAGLPCSP*RLKAEK
Trigger: CTTCTCTGCCTTCAATCTTCAGGGACTGCAGGGAAG...ACCTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp GTGAATTGCCCTTCTCCTGGCATCCTTGCATACTGGACAGTTTCAGCTCCATCTGTCAGCAGGTGGGTCTaGAGAACAGCTAGGACCTGG +
Preference number: 2 (lower is better)
Translates to: VNCPSPGILAYWTVSAPSVSRWV*RTARTW
Trigger: CCAGGTCCTAGCTGTTCTCCAGACCCACCTGCTGAC...AGATGGAGCTGAAACTGTCCAGTATGCAAGGATGCCAGGAGAAGGGCAATTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp GGGCTTCCTAGGCCTTTCCCTCCTGACACATGGCATTTGCCCAGTGGAAGGTCTGGCATCCTTGCATACTaGACAGTTTCAGCTCCATCT +
Preference number: 2 (lower is better)
Translates to: GLPRPFPPDTWHLPSGRSGILAY*TVSAPS
Trigger: AGATGGAGCTGAAACTGTCCAGTATGCAAGGATGCC...AGACCTTCCACTGGGCAAATGCCATGTGTCAGGAGGGAAAGGCCTAGGAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp CAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGGTAGCCCTCTTGTGTCTTaGCAGGGAAGATCTTCAGAG +
Preference number: 2 (lower is better)
Translates to: QPQILIRAQDREPFSEAGSPLVS*QGRSSE
Trigger: CTCTGAAGATCTTCCCTGCCAAGACACAAGAGGGCT...ACCTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp GGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCTCTAAAGTCAGCAGGTaGGTCTGGAGAACAGCTAGG +
Preference number: 2 (lower is better)
Translates to: GKIFRVGLDNQGVGSSVGSKVSR*VWRTAR
Trigger: CCTAGCTGTTCTCCAGACCCACCTGCTGACTTTAGA...GCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR CCA 90 bp CAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGGTCTCCACTACATACCATaGGGTAGAGGTCGACTTGGA +
Preference number: 2 (lower is better)
Translates to: QPQILIRAQDREPFSEAGLHYIP*GRGRLG
Trigger: TCCAAGTCGACCTCTACCCCATGGTATGTAGTGGAG...ACCTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR GCA 90 bp GGGCTTCCTAGGCCTTTCCCTCCTGACACATGGCATTTGCCCAGTGGAAGGTCTGATGTTTTTCTGAAGTaGAATCCCTCACCCACTTTC +
Preference number: 2 (lower is better)
Translates to: GLPRPFPPDTWHLPSGRSDVFLK*NPSPTF
Trigger: GAAAGTGGGTGAGGGATTGCACTTCAGAAAAACATC...AGACCTTCCACTGGGCAAATGCCATGTGTCAGGAGGGAAAGGCCTAGGAAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR CCA 72 bp GTAAACACCAGCCGGCTGGGTCTCTGCAGTGGGCCCTaGGAGGGCAGAGTAGTCTTGCCCTGCATGGCCTGC +
Preference number: 3 (lower is better)
Translates to: VNTSRLGLCSGP*EGRVVLPCMAC
Trigger: GCAGGCCATGCAGGGCAAGACTACTCTGCCCTCCCAGGGCCCACTGCAGAGACCCAGCCGGCTGGTGTTTAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430746.5
3UTR GCA 72 bp ACAGAGGCGGCGTCCCGCCCATGCTCCAGCAGCTCCTaGTCCAACTCATCTTGTTCCTCCGTGGGGTCGAAG +
Preference number: 3 (lower is better)
Translates to: TEAASRPCSSSS*SNSSCSSVGSK
Trigger: CTTCGACCCCACGGAGGAACAAGATGAGTTGGAGCAGGAGCTGCTGGAGCATGGGCGGGACGCCGCCTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430746.5
3UTR GCA 72 bp CCCTGGGAGGGCAGAGTAGTCTTGCCCTGCATGGCCTaGACAGAAGTAGCAGCCTGTACAGAGGCGGCGTCC +
Preference number: 3 (lower is better)
Translates to: PWEGRVVLPCMA*TEVAACTEAAS
Trigger: GGACGCCGCCTCTGTACAGGCTGCTACTTCTGTGCAGGCCATGCAGGGCAAGACTACTCTGCCCTCCCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430746.5
3UTR GCA 72 bp TTGGCCACATCGGTAAACACCAGCCGGCTGGGTCTCTaGAGTGGGCCCTGGGAGGGCAGAGTAGTCTTGCCC +
Preference number: 3 (lower is better)
Translates to: LATSVNTSRLGL*SGPWEGRVVLP
Trigger: GGGCAAGACTACTCTGCCCTCCCAGGGCCCACTGCAGAGACCCAGCCGGCTGGTGTTTACCGATGTGGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430746.5
3UTR-3UTR CAA 90 bp TGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGTCCTGGCTCAGCCCTCTaGTGTCTTGGCAGGGAAGAT +
Preference number: 3 (lower is better)
Translates to: WVAGRPPGPSVVWMDPGCPGSAL*CLGRED
Trigger: ATCTTCCCTGCCAAGACACAAGAGGGCTGAGCCAGG...ACACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR TCA 72 bp TGCCCAATGGCTTGCCAGGACCCCTGGTATCAGCCCTaGCCCTCCAAGGCTTATGGAGAGGCCAAGTGCAGG +
Preference number: 3 (lower is better)
Translates to: CPMACQDPWYQP*PSKAYGEAKCR
Trigger: CCTGCACTTGGCCTCTCCATAAGCCTTGGAGGGTCAGGGCTGATACCAGGGGTCCTGGCAAGCCATTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR GCA 72 bp GTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTaGTGGGACAGGCACATGTCTGCCCATGGGCACACT +
Preference number: 3 (lower is better)
Translates to: VGPVWTISFCPL*WDRHMSAHGHT
Trigger: AGTGTGCCCATGGGCAGACATGTGCCTGTCCCAGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR GCA 72 bp GCATTTGCCCAGTGGAAGGTCTGCATACACTACCCCTaGATCCCCTCCAGCCAGCAGCGGACAGTGACGGTG +
Preference number: 3 (lower is better)
Translates to: AFAQWKVCIHYP*IPSSQQRTVTV
Trigger: CACCGTCACTGTCCGCTGCTGGCTGGAGGGGATGCAGGGGTAGTGTATGCAGACCTTCCACTGGGCAAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR CCA 72 bp GGCCCCAGTAACATCTGGTTGCCAAGGATGGGTGGCTaGGAGACCTCCTGGACCCTCCGTAGTATGGATGGA +
Preference number: 3 (lower is better)
Translates to: GPSNIWLPRMGG*ETSWTLRSMDG
Trigger: TCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCATCCTTGGCAACCAGATGTTACTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR CCA 72 bp GGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTaGGACAGGCACATGTCTGCCCATGGGCACACTCAT +
Preference number: 3 (lower is better)
Translates to: GPVWTISFCPLC*DRHMSAHGHTH
Trigger: ATGAGTGTGCCCATGGGCAGACATGTGCCTGTCCCAGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR CAA 90 bp CCTGACCCTCCAAGGCTTATGGAGAGGCCAAGTGCAGGGACCCATCTCCCCACTAGCTCCCATCCTAGCTaGGCCCCAGTAACATCTGGT +
Preference number: 3 (lower is better)
Translates to: PDPPRLMERPSAGTHLPTSSHPS*APVTSG
Trigger: ACCAGATGTTACTGGGGCCAAGCTAGGATGGGAGCT...AGTGGGGAGATGGGTCCCTGCACTTGGCCTCTCCATAAGCCTTGGAGGGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR CAA 90 bp TCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTGGCAGCCCTCTTGTGTCTaGGCAGGGAAGATCTTCAGA +
Preference number: 3 (lower is better)
Translates to: STWRVGPVWTISFCPLCWQPSCV*AGKIFR
Trigger: TCTGAAGATCTTCCCTGCCAAGACACAAGAGGGCTG...CCAGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR CAA 90 bp ATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGCTTCTCCTGGCATCCTaGCATACTGGACAGTTTCAG +
Preference number: 3 (lower is better)
Translates to: MGGWETSWTLRSMDGPWVLLLAS*HTGQFQ
Trigger: CTGAAACTGTCCAGTATGCAAGGATGCCAGGAGAAG...CACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR CAA 90 bp GGGCTTCCTAGGCCTTTCCCTCCTGACACATGGCATTTGCCCAGTGGAAGGTCTCCCTGTCCCTATAACTaGGGTGGTTTCCTCTCCCCA +
Preference number: 3 (lower is better)
Translates to: GLPRPFPPDTWHLPSGRSPCPYN*GGFLSP
Trigger: TGGGGAGAGGAAACCACCCAAGTTATAGGGACAGGG...AGACCTTCCACTGGGCAAATGCCATGTGTCAGGAGGGAAAGGCCTAGGAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR CAA 90 bp TCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTGGCTTCTCCTGGCATCCTaGCATACTGGACAGTTTCAG +
Preference number: 3 (lower is better)
Translates to: STWRVGPVWTISFCPLCWLLLAS*HTGQFQ
Trigger: CTGAAACTGTCCAGTATGCAAGGATGCCAGGAGAAG...CCAGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR CAA 90 bp CATGGGGTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGAGCTCCCATCCTAGCTaGGCCCCAGTAACATCTGGT +
Preference number: 3 (lower is better)
Translates to: HGVEVDLEGGASVDNLILSSHPS*APVTSG
Trigger: ACCAGATGTTACTGGGGCCAAGCTAGGATGGGAGCT...CAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTACCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR CAA 90 bp CAATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCAGCTCCCATCCTAGCTaGGCCCCAGTAACATCTGGT +
Preference number: 3 (lower is better)
Translates to: QSLPLRISLISSTLAGQTSSHPS*APVTSG
Trigger: ACCAGATGTTACTGGGGCCAAGCTAGGATGGGAGCT...GGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR TCA 72 bp CAAGTGCAGGGACCCATCTCCCCACTCTCTAAACACTaGACGGCTCTTCCCATAGATGGGATGGAGGTGGGG +
Preference number: 3 (lower is better)
Translates to: QVQGPISPLSKH*TALPIDGMEVG
Trigger: CCCCACCTCCATCCCATCTATGGGAAGAGCCGTTCAGTGTTTAGAGAGTGGGGAGATGGGTCCCTGCACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR CCA 72 bp GGCCCTCTCTTAGAGTCTAAAGTCAGCAGGTGGGTCTaGAGAACAGCTAGGACCTGGCTCAGCCCTCTTGTG +
Preference number: 3 (lower is better)
Translates to: GPLLESKVSRWV*RTARTWLSPLV
Trigger: CACAAGAGGGCTGAGCCAGGTCCTAGCTGTTCTCCAGACCCACCTGCTGACTTTAGACTCTAAGAGAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
3UTR CCA 72 bp CACTACATACCATGGGGTAGAGGTCGACTTGGAGGGTaGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGT +
Preference number: 3 (lower is better)
Translates to: HYIPWGRGRLGG*GQCGQSHSARC
Trigger: ACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTACCCCATGGTATGTAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR CCA 72 bp AAAAATGCCCTGCTCTTGTGGTCTGTCTCTGCCCAATaGCTTGCCAGGACCCCTGGTATCAGCCCTGACCCT +
Preference number: 3 (lower is better)
Translates to: KNALLLWSVSAQ*LARTPGISPDP
Trigger: AGGGTCAGGGCTGATACCAGGGGTCCTGGCAAGCCATTGGGCAGAGACAGACCACAAGAGCAGGGCATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR CCA 72 bp CCATGGGGGCTTCCTAGGCCTTTCCCTCCTGACACATaGCATTTGCCCAGTGGAAGGTCTGCATACACTACC +
Preference number: 3 (lower is better)
Translates to: PWGLPRPFPPDT*HLPSGRSAYTT
Trigger: GGTAGTGTATGCAGACCTTCCACTGGGCAAATGCCATGTGTCAGGAGGGAAAGGCCTAGGAAGCCCCCATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR TCA 72 bp TCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGTaGATTGCCCTTCTCCTGGCATCCTTGCATACTGGA +
Preference number: 3 (lower is better)
Translates to: SWTLRSMDGPWV*IALLLASLHTG
Trigger: TCCAGTATGCAAGGATGCCAGGAGAAGGGCAATTCACACCCAGGGTCCATCCATACTACGGAGGGTCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR TCA 72 bp CTTGTTCCTCCGTGGGGTCGAAGTTGTACATGGGCATaGGCTGGTGGCGTAGCTTCTCCAGCCTCTTCTTCT +
Preference number: 3 (lower is better)
Translates to: LVPPWGRSCTWA*AGGVASPASSS
Trigger: AGAAGAAGAGGCTGGAGAAGCTACGCCACCAGCTCATGCCCATGTACAACTTCGACCCCACGGAGGAACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430746.5
3UTR GCA 72 bp AGCCGTTTTCAGAAGCAGGTGAGCCCAGTGAAACAATaGAGTGGAGAGAGGAACCGTGCTGTGCGTGCTTCC +
Preference number: 3 (lower is better)
Translates to: SRFQKQVSPVKQ*SGERNRAVRAS
Trigger: GGAAGCACGCACAGCACGGTTCCTCTCTCCACTGCATTGTTTCACTGGGCTCACCTGCTTCTGAAAACGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR CCA 72 bp TCCGTGGGGTCGAAGTTGTACATGGGCATGAGCTGGTaGCGTAGCTTCTCCAGCCTCTTCTTCTTCCTGATG +
Preference number: 3 (lower is better)
Translates to: SVGSKLYMGMSW*RSFSSLFFFLM
Trigger: CATCAGGAAGAAGAAGAGGCTGGAGAAGCTACGCCACCAGCTCATGCCCATGTACAACTTCGACCCCACGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430746.5
3UTR-3UTR CAA 90 bp CTGGGCTTCTCAGGGCCCATAACAGATGCTGCCCTACCCTGTCCCTATAACTTGCAGCCCTCTTGTGTCTaGGCAGGGAAGATCTTCAGA +
Preference number: 3 (lower is better)
Translates to: LGFSGPITDAALPCPYNLQPSCV*AGKIFR
Trigger: TCTGAAGATCTTCCCTGCCAAGACACAAGAGGGCTG...CAAGTTATAGGGACAGGGTAGGGCAGCATCTGTTATGGGCCCTGAGAAGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR CAA 90 bp GGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCCTGCTCCAACTCATCTaGTTCCTCCGTGGGGTCGAA +
Preference number: 3 (lower is better)
Translates to: GKIFRVGLDNQGVGSSVGLLQLI*FLRGVE
Trigger: TTCGACCCCACGGAGGAACAAGATGAGTTGGAGCAG...GCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430746.5
3UTR GCA 72 bp GACCCTGGGTGTGAATTGCCCTTCTCCTGGCATCCTTaGATACTGGACAGTTTCAGCTCCATCTCTGGGCTT +
Preference number: 3 (lower is better)
Translates to: DPGCELPFSWHP*ILDSFSSISGL
Trigger: AAGCCCAGAGATGGAGCTGAAACTGTCCAGTATGCAAGGATGCCAGGAGAAGGGCAATTCACACCCAGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR-3UTR CAA 90 bp CAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGGTCAGCCCTCTTGTGTCTaGGCAGGGAAGATCTTCAGA +
Preference number: 3 (lower is better)
Translates to: QPQILIRAQDREPFSEAGQPSCV*AGKIFR
Trigger: TCTGAAGATCTTCCCTGCCAAGACACAAGAGGGCTG...ACCTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR CAA 90 bp GGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCCAGCCCTCTTGTGTCTaGGCAGGGAAGATCTTCAGA +
Preference number: 3 (lower is better)
Translates to: GKIFRVGLDNQGVGSSVGQPSCV*AGKIFR
Trigger: TCTGAAGATCTTCCCTGCCAAGACACAAGAGGGCTG...GCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
3UTR TCA 72 bp TTGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTaGCAATCAGGGAGTGGGGAGCTCTGTAGGCACCGT +
Preference number: 3 (lower is better)
Translates to: LCLGREDLQSRS*QSGSGELCRHR
Trigger: ACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
3UTR CCA 72 bp GTATGGATGGACCCTGGGTGTGAATTGCCCTTCTCCTaGCATCCTTGCATACTGGACAGTTTCAGCTCCATC +
Preference number: 3 (lower is better)
Translates to: VWMDPGCELPFS*HPCILDSFSSI
Trigger: GATGGAGCTGAAACTGTCCAGTATGCAAGGATGCCAGGAGAAGGGCAATTCACACCCAGGGTCCATCCATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR CCA 72 bp CATTTAGAGGAGGGAATAAATCCAGAACCTTCCCCATaGGGGCTTCCTAGGCCTTTCCCTCCTGACACATGG +
Preference number: 3 (lower is better)
Translates to: HLEEGINPEPSP*GLPRPFPPDTW
Trigger: CCATGTGTCAGGAGGGAAAGGCCTAGGAAGCCCCCATGGGGAAGGTTCTGGATTTATTCCCTCCTCTAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR-3UTR CAA 90 bp GTGAATTGCCCTTCTCCTGGCATCCTTGCATACTGGACAGTTTCAGCTCCATCTCCCTGTCCCTATAACTaGGGTGGTTTCCTCTCCCCA +
Preference number: 3 (lower is better)
Translates to: VNCPSPGILAYWTVSAPSPCPYN*GGFLSP
Trigger: TGGGGAGAGGAAACCACCCAAGTTATAGGGACAGGG...AGATGGAGCTGAAACTGTCCAGTATGCAAGGATGCCAGGAGAAGGGCAATTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
3UTR TCA 72 bp GAGCTGCTCTGGGTTAAATTACAGCTGTATGCATCCTaGATTCCTGGCAGCCTCCAGTCGACTCAAGTGCTA +
Preference number: 3 (lower is better)
Translates to: ELLWVKLQLYAS*IPGSLQSTQVL
Trigger: TAGCACTTGAGTCGACTGGAGGCTGCCAGGAATTCAGGATGCATACAGCTGTAATTTAACCCAGAGCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR GCA 72 bp CATCTTCATTACATCTTTAATGCTCTCACGTGGAGCTaGTCTGGGTTAAATTACAGCTGTATGCATCCTGAA +
Preference number: 3 (lower is better)
Translates to: HLHYIFNALTWS*SGLNYSCMHPE
Trigger: TTCAGGATGCATACAGCTGTAATTTAACCCAGAGCAGCTCCACGTGAGAGCATTAAAGATGTAATGAAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR CCA 72 bp TGTAAACATCTTCATTACATCTTTAATGCTCTCACGTaGAGCTGCTCTGGGTTAAATTACAGCTGTATGCAT +
Preference number: 3 (lower is better)
Translates to: CKHLHYIFNALT*SCSGLNYSCMH
Trigger: ATGCATACAGCTGTAATTTAACCCAGAGCAGCTCCACGTGAGAGCATTAAAGATGTAATGAAGATGTTTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357203.8
ENST00000426034.5
CDS-3UTR GCA 90 bp CTGGGAGGGCAGAGTAGTCTTGCCCTGCATGGCCTGCACAGAAGTAGCAGCCTGGGCCAGGCCCGCTACTaGGCACCAGCCGCATCCGCG +
Preference number: 4 (lower is better)
Translates to: LGGQSSLALHGLHRSSSLGQARY*APAASA
Trigger: CGCGGATGCGGCTGGTGCGCAGTAGCGGGCCTGGCC...CAGGCTGCTACTTCTGTGCAGGCCATGCAGGGCAAGACTACTCTGCCCTCCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430746.5
CDS-3UTR CCA 90 bp ATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGAGGGGTGGTAGTGACTaGCAGGAGGCCGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: MGGWETSWTLRSMDGPWVRGGSD*QEAGAG
Trigger: CCCCGCCCCGGCCTCCTGCCAGTCACTACCACCCCT...CACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
CDS-3UTR GCA 90 bp TCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGCCCGGCGTCTGGGGCTaGGGGTCCGACCCGAGATCC +
Preference number: 4 (lower is better)
Translates to: SLPLRISLISSTLAGQTLPGVWG*GSDPRS
Trigger: GGATCTCGGGTCGGACCCGCAGCCCCAGACGCCGGG...CAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
CDS-3UTR GCA 90 bp GCCCTGCATGGCCTGCACAGAAGTAGCAGCCTGTACAGAGGCGGCGTCCCGCCCCCCTGGCTGAGAGGCTaGCTGATGCCAGTCAACCTG +
Preference number: 4 (lower is better)
Translates to: ALHGLHRSSSLYRGGVPPPWLRG*LMPVNL
Trigger: CAGGTTGACTGGCATCAGGCAGCCTCTCAGCCAGGG...GGGCGGGACGCCGCCTCTGTACAGGCTGCTACTTCTGTGCAGGCCATGCAGGGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000430746.5
CDS-3UTR CCA 90 bp CCCTGCATGGCCTGCACAGAAGTAGCAGCCTGTACAGAGGCGGCGTCCCGCCCAGGTTCCTGCCACCTGTaGTGGCCACCTGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: PCMACTEVAACTEAASRPGSCHL*WPPAQP
Trigger: TGGCTGTGCAGGTGGCCACCACAGGTGGCAGGAACC...TGGGCGGGACGCCGCCTCTGTACAGGCTGCTACTTCTGTGCAGGCCATGCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430746.5
CDS-3UTR GCA 90 bp GGAGGGCAGAGTAGTCTTGCCCTGCATGGCCTGCACAGAAGTAGCAGCCTGTACCGCGAGCGCTGGCTCTaGCGGCCTGAGCTAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GGQSSLALHGLHRSSSLYRERWL*RPELGW
Trigger: CCACCCTAGCTCAGGCCGGCAGAGCCAGCGCTCGCG...GTACAGGCTGCTACTTCTGTGCAGGCCATGCAGGGCAAGACTACTCTGCCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430746.5
CDS-3UTR GCA 90 bp CTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGATGTGAGGGATCTGGACGGCCAGGCCCGCTACTaGGCACCAGCCGCATCCGCG +
Preference number: 4 (lower is better)
Translates to: LPHFLHISGADPDVRDLDGQARY*APAASA
Trigger: CGCGGATGCGGCTGGTGCGCAGTAGCGGGCCTGGCC...GTCCAGATCCCTCACATCAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
CDS-3UTR GCA 90 bp TGTGGACAATCTCATTCTGCCCGCTGTGCTGGGACAGGCACATGTCTGCCCATGGGCCAGGCCCGCTACTaGGCACCAGCCGCATCCGCG +
Preference number: 4 (lower is better)
Translates to: CGQSHSARCAGTGTCLPMGQARY*APAASA
Trigger: CGCGGATGCGGCTGGTGCGCAGTAGCGGGCCTGGCC...CATGGGCAGACATGTGCCTGTCCCAGCACAGCGGGCAGAATGAGATTGTCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
CDS-3UTR GCA 90 bp CTGCTCTTGTGGTCTGTCTCTGCCCAATGGCTTGCCAGGACCCCTGGTATCAGCAGCCGGCTGGGTCTCTaGAGTGGGCCCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LLLWSVSAQWLARTPGISSRLGL*SGPWEG
Trigger: GCCCTCCCAGGGCCCACTGCAGAGACCCAGCCGGCT...GCTGATACCAGGGGTCCTGGCAAGCCATTGGGCAGAGACAGACCACAAGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp ATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTCAAGCCCCGAGCCGCTaGCCAGGCCCGCTACTGCGC +
Preference number: 4 (lower is better)
Translates to: IPPTPYLPHFLHISGADPQAPSR*PGPLLR
Trigger: GCGCAGTAGCGGGCCTGGCCAGCGGCTCGGGGCTTG...AGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
CDS-3UTR CCA 90 bp GGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTAGGGGTGGTAGTGACTaGCAGGAGGCCGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GSGELCRHRDGSLSEVQARGGSD*QEAGAG
Trigger: CCCCGCCCCGGCCTCCTGCCAGTCACTACCACCCCT...AGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
CDS-3UTR TCA 90 bp GGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTCTGCCCACTCACTCCTaGCTCCGGAGTGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GSGELCRHRDGSLSEVQALPTHS*LRSAPA
Trigger: GGCTGGGGCACTCCGGAGTCAGGAGTGAGTGGGCAG...AGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS-3UTR TCA 90 bp AGGATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGTCCTGGAGTTCATGCTaGTGCGGAGAGGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: RMGGWETSWTLRSMDGPWSWSSC*CGEGPG
Trigger: GCCAGGGCCCTCTCCGCATCAGCATGAACTCCAGGA...CCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCATCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR TCA 90 bp TGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGTTCCTGGAGTTCATGCTaGTGCGGAGAGGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: WVAGRPPGPSVVWMDPGCSWSSC*CGEGPG
Trigger: GCCAGGGCCCTCTCCGCATCAGCATGAACTCCAGGA...ACACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CATGGGGTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCGCGAGCGCTGGCTCTaGCGGCCTGAGCTAGGGTGG +
Preference number: 4 (lower is better)
Translates to: HGVEVDLEGGASVDNLILRERWL*RPELGW
Trigger: CCACCCTAGCTCAGGCCGGCAGAGCCAGCGCTCGCG...CAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTACCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357203.8
CDS-3UTR GCA 90 bp GGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCCCGGCGTCTGGGGCTaGGGGTCCGACCCGAGATCC +
Preference number: 4 (lower is better)
Translates to: GLDNQGVGSSVGTVMGLYPGVWG*GSDPRS
Trigger: GGATCTCGGGTCGGACCCGCAGCCCCAGACGCCGGG...ATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
CDS-3UTR GCA 90 bp ATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGCTCCTGACTCCGGAGTaGCCCAGCCTGTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: MGGWETSWTLRSMDGPWVLLTPE*PSLWFL
Trigger: CAGGAACCACAGGCTGGGGCACTCCGGAGTCAGGAG...CACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp ATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTAGCCGGCTGGGTCTCTaGAGTGGGCCCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: IPPTPYLPHFLHISGADPSRLGL*SGPWEG
Trigger: GCCCTCCCAGGGCCCACTGCAGAGACCCAGCCGGCT...AGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTTGTCCCAGGCCAAGCCGGCTGGGTCTCTaGAGTGGGCCCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LCRHRDGSLSEVQACPRPSRLGL*SGPWEG
Trigger: GCCCTCCCAGGGCCCACTGCAGAGACCCAGCCGGCT...TGGCCTGGGACAAGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTTGTCCCAGGCCAAGGGGTGGTAGTGACTaGCAGGAGGCCGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LCRHRDGSLSEVQACPRPRGGSD*QEAGAG
Trigger: CCCCGCCCCGGCCTCCTGCCAGTCACTACCACCCCT...TGGCCTGGGACAAGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
CDS-3UTR CCA 90 bp GGTCAGGAGAAGTCAGTGGTCAGAAGTCCAGCCTGGCTAGGGCCCTCTCTTAGAAGGGGTGGTAGTGACTaGCAGGAGGCCGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GQEKSVVRSPAWLGPSLRRGGSD*QEAGAG
Trigger: CCCCGCCCCGGCCTCCTGCCAGTCACTACCACCCCT...TCTAAGAGAGGGCCCTAGCCAGGCTGGACTTCTGACCACTGACTTCTCCTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
CDS-3UTR CCA 90 bp TGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGTGGTTCCTGCCACCTGTaGTGGCCACCTGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: WVAGRPPGPSVVWMDPGCGSCHL*WPPAQP
Trigger: TGGCTGTGCAGGTGGCCACCACAGGTGGCAGGAACC...ACACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp ATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGCCAAGGATGGGTGGCTaGGAGACCTCCTGGACCCTC +
Preference number: 4 (lower is better)
Translates to: MGGWETSWTLRSMDGPWVPRMGG*ETSWTL
Trigger: GAGGGTCCAGGAGGTCTCCCAGCCACCCATCCTTGG...CACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp GGACAGGGGATGAGGAAGCCAGCAGAGGCTCTTGACCTTCTCAGCATGAGGGATCTGCCCACTCACTCCTaGCTCCGGAGTGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GQGMRKPAEALDLLSMRDLPTHS*LRSAPA
Trigger: GGCTGGGGCACTCCGGAGTCAGGAGTGAGTGGGCAG...ATCCCTCATGCTGAGAAGGTCAAGAGCCTCTGCTGGCTTCCTCATCCCCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CTGCTCTTGTGGTCTGTCTCTGCCCAATGGCTTGCCAGGACCCCTGGTATCAGCGAGGGATGCCCTCTGTaGCAGGGCCCTCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LLLWSVSAQWLARTPGISEGCPL*QGPQVR
Trigger: CCTGACCTGAGGGCCCTGGCACAGAGGGCATCCCTC...GCTGATACCAGGGGTCCTGGCAAGCCATTGGGCAGAGACAGACCACAAGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CAATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCGCATCCGCGAGCGCTaGCTCTGCCGGCCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: QSLPLRISLISSTLAGQTRIRER*LCRPEL
Trigger: TAGCTCAGGCCGGCAGAGCCAGCGCTCGCGGATGCG...GGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000430746.5
ENST00000441239.5
CDS-3UTR CCA 90 bp CCTGACCCTCCAAGGCTTATGGAGAGGCCAAGTGCAGGGACCCATCTCCCCACTGGTTCCTGCCACCTGTaGTGGCCACCTGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: PDPPRLMERPSAGTHLPTGSCHL*WPPAQP
Trigger: TGGCTGTGCAGGTGGCCACCACAGGTGGCAGGAACC...AGTGGGGAGATGGGTCCCTGCACTTGGCCTCTCCATAAGCCTTGGAGGGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CCTGACCCTCCAAGGCTTATGGAGAGGCCAAGTGCAGGGACCCATCTCCCCACTATGCGGAGAGGGCCCTaGCTGAGAGGCTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: PDPPRLMERPSAGTHLPTMRRGP*LRGCLM
Trigger: CATCAGGCAGCCTCTCAGCCAGGGCCCTCTCCGCAT...AGTGGGGAGATGGGTCCCTGCACTTGGCCTCTCCATAAGCCTTGGAGGGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GCCCTGGGAGGGCAGAGTAGTCTTGCCCTGCATGGCCTGCACAGAAGTAGCAGCCAAAGGACAGAAGCATaGTACCCACGCCGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: ALGGQSSLALHGLHRSSSQRTEA*YPRRPC
Trigger: GCACGGCCGGCGTGGGTACCATGCTTCTGTCCTTTG...GCTGCTACTTCTGTGCAGGCCATGCAGGGCAAGACTACTCTGCCCTCCCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430746.5
CDS-3UTR CCA 90 bp CCTGACCCTCCAAGGCTTATGGAGAGGCCAAGTGCAGGGACCCATCTCCCCACTCCAAGGATGGGTGGCTaGGAGACCTCCTGGACCCTC +
Preference number: 4 (lower is better)
Translates to: PDPPRLMERPSAGTHLPTPRMGG*ETSWTL
Trigger: GAGGGTCCAGGAGGTCTCCCAGCCACCCATCCTTGG...AGTGGGGAGATGGGTCCCTGCACTTGGCCTCTCCATAAGCCTTGGAGGGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR CAA 72 bp CCAGGCTTGTCCCAGGCCACTCACGCATGGATGGCATaGGCCACATCGGTAAACACCAGCCGGCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PGLSQATHAWMA*ATSVNTSRLGL
Trigger: GAGACCCAGCCGGCTGGTGTTTACCGATGTGGCCAATGCCATCCATGCGTGAGTGGCCTGGGACAAGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430746.5
CDS-3UTR TCA 90 bp CTGGGCTTCTCAGGGCCCATAACAGATGCTGCCCTACCCTGTCCCTATAACTTGCTGCCCACTCACTCCTaGCTCCGGAGTGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LGFSGPITDAALPCPYNLLPTHS*LRSAPA
Trigger: GGCTGGGGCACTCCGGAGTCAGGAGTGAGTGGGCAG...CAAGTTATAGGGACAGGGTAGGGCAGCATCTGTTATGGGCCCTGAGAAGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR TCA 90 bp TCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTGGGGGCAGACCCTGATGTaGGGGATCTGGACAGGGGAT +
Preference number: 4 (lower is better)
Translates to: STWRVGPVWTISFCPLCWGQTLM*GIWTGD
Trigger: ATCCCCTGTCCAGATCCCTCACATCAGGGTCTGCCC...CCAGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp TGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGTACTCATGCACATGCATaGGGCCTCTCGGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: WVAGRPPGPSVVWMDPGCTHAHA*GLSAGL
Trigger: CAGACCTGCCGAGAGGCCTCATGCATGTGCATGAGT...ACACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp ATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGCCCTGGTATCAGCCCTaGCCCTCCAAGGCTTATGGA +
Preference number: 4 (lower is better)
Translates to: MGGWETSWTLRSMDGPWVPWYQP*PSKAYG
Trigger: TCCATAAGCCTTGGAGGGTCAGGGCTGATACCAGGG...CACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCGAGATCCGCCCTCCCTaGAAGCCCCGAGCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: VLAGKIFRVGLDNQGVGSEIRPP*KPRAAG
Trigger: GCCAGCGGCTCGGGGCTTGCAGGGAGGGCGGATCTC...GCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
CDS-3UTR GCA 90 bp TGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGCCCGGCGTCTGGGGCTaGGGGTCCGACCCGAGATCC +
Preference number: 4 (lower is better)
Translates to: CVLAGKIFRVGLDNQGVGPGVWG*GSDPRS
Trigger: GGATCTCGGGTCGGACCCGCAGCCCCAGACGCCGGG...CCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
CDS-3UTR GCA 90 bp GGGCTTCCTAGGCCTTTCCCTCCTGACACATGGCATTTGCCCAGTGGAAGGTCTTACCCACGCCGGCCGTaGCACCAGCTGCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: GLPRPFPPDTWHLPSGRSYPRRP*HQLHQG
Trigger: TCCCTGATGCAGCTGGTGGCACGGCCGGCGTGGGTA...AGACCTTCCACTGGGCAAATGCCATGTGTCAGGAGGGAAAGGCCTAGGAAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGATGTGAGGGATCTGGACTACCCACGCCGGCCGTaGCACCAGCTGCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: LPHFLHISGADPDVRDLDYPRRP*HQLHQG
Trigger: TCCCTGATGCAGCTGGTGGCACGGCCGGCGTGGGTA...GTCCAGATCCCTCACATCAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS-3UTR GCA 90 bp TTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGAGCCGGCTGGGTCTCTaGAGTGGGCCCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: FRVGLDNQGVGSSVGTVMSRLGL*SGPWEG
Trigger: GCCCTCCCAGGGCCCACTGCAGAGACCCAGCCGGCT...CATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CCTGACCCTCCAAGGCTTATGGAGAGGCCAAGTGCAGGGACCCATCTCCCCACTTCTCAGCATGAGGGATaGCCTCTGTGCCAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PDPPRLMERPSAGTHLPTSQHEG*PLCQGP
Trigger: AGGGCCCTGGCACAGAGGGCATCCCTCATGCTGAGA...AGTGGGGAGATGGGTCCCTGCACTTGGCCTCTCCATAAGCCTTGGAGGGTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp TGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGTGCACACTCATGCACATaGATGAGGCCTCTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: WVAGRPPGPSVVWMDPGCAHSCT*MRPLGR
Trigger: CCTGCCGAGAGGCCTCATGCATGTGCATGAGTGTGC...ACACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp ATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGCTCTGCCCAATGGCTTaGCAGGACCCCTGGTATCAG +
Preference number: 4 (lower is better)
Translates to: MGGWETSWTLRSMDGPWVLCPMA*QDPWYQ
Trigger: CTGATACCAGGGGTCCTGGCAAGCCATTGGGCAGAG...CACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCGCATCCGCGAGCGCTaGCTCTGCCGGCCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: GLDNQGVGSSVGTVMGLYRIRER*LCRPEL
Trigger: TAGCTCAGGCCGGCAGAGCCAGCGCTCGCGGATGCG...ATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000430746.5
ENST00000441239.5
CDS-3UTR CCA 90 bp GGAGGGCAGAGTAGTCTTGCCCTGCATGGCCTGCACAGAAGTAGCAGCCTGTACATGCGGAGAGGGCCCTaGCTGAGAGGCTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: GGQSSLALHGLHRSSSLYMRRGP*LRGCLM
Trigger: CATCAGGCAGCCTCTCAGCCAGGGCCCTCTCCGCAT...GTACAGGCTGCTACTTCTGTGCAGGCCATGCAGGGCAAGACTACTCTGCCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430746.5
CDS-3UTR CCA 90 bp AGGATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTCAGCAGGTGGGTCTaGAGAACAGCTAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: RMGGWETSWTLRSMDGPWVSRWV*RTARTW
Trigger: CCAGGTCCTAGCTGTTCTCCAGACCCACCTGCTGAC...CCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCATCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTCCAAGGATGGGTGGCTaGGAGACCTCCTGGACCCTC +
Preference number: 4 (lower is better)
Translates to: GSGELCRHRDGSLSEVQAPRMGG*ETSWTL
Trigger: GAGGGTCCAGGAGGTCTCCCAGCCACCCATCCTTGG...AGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGCCAAGGATGGGTGGCTaGGAGACCTCCTGGACCCTC +
Preference number: 4 (lower is better)
Translates to: SLPLRISLISSTLAGQTLPRMGG*ETSWTL
Trigger: GAGGGTCCAGGAGGTCTCCCAGCCACCCATCCTTGG...CAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp AGGATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGTCTGGTTGCCAAGGATaGGTGGCTGGGAGACCTCCT +
Preference number: 4 (lower is better)
Translates to: RMGGWETSWTLRSMDGPWSGCQG*VAGRPP
Trigger: AGGAGGTCTCCCAGCCACCCATCCTTGGCAACCAGA...CCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCATCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGTTCTGTCTCTGCCCAATaGCTTGCCAGGACCCCTGGT +
Preference number: 4 (lower is better)
Translates to: WVAGRPPGPSVVWMDPGCSVSAQ*LARTPG
Trigger: ACCAGGGGTCCTGGCAAGCCATTGGGCAGAGACAGA...ACACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR TCA 90 bp CAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGGTCTGCCCACTCACTCCTaGCTCCGGAGTGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: QPQILIRAQDREPFSEAGLPTHS*LRSAPA
Trigger: GGCTGGGGCACTCCGGAGTCAGGAGTGAGTGGGCAG...ACCTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR TCA 90 bp CTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGATGTGAGGGATCTGGACTCCTGGAGTTCATGCTaGTGCGGAGAGGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LPHFLHISGADPDVRDLDSWSSC*CGEGPG
Trigger: GCCAGGGCCCTCTCCGCATCAGCATGAACTCCAGGA...GTCCAGATCCCTCACATCAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS-3UTR TCA 90 bp AGGATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGTTGACCTTCTCAGCATaGGGGATGCCCTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: RMGGWETSWTLRSMDGPWLTFSA*GMPSVP
Trigger: TGGCACAGAGGGCATCCCTCATGCTGAGAAGGTCAA...CCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp GTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGATCTGGACAGGGGATaGGGAAGCCAGCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: VEVDLEGGASVDNLILPADLDRG*GSQQRL
Trigger: GAGCCTCTGCTGGCTTCCTCATCCCCTGTCCAGATC...AGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp TCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGGATCTGGACAGGGGATaGGGAAGCCAGCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SLPLRISLISSTLAGQTLDLDRG*GSQQRL
Trigger: GAGCCTCTGCTGGCTTCCTCATCCCCTGTCCAGATC...CAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp GTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGGGCAGACCCTGATGTaGGGGATCTGGACAGGGGAT +
Preference number: 4 (lower is better)
Translates to: VEVDLEGGASVDNLILPAGQTLM*GIWTGD
Trigger: ATCCCCTGTCCAGATCCCTCACATCAGGGTCTGCCC...AGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp TCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGGGGCAGACCCTGATGTaGGGGATCTGGACAGGGGAT +
Preference number: 4 (lower is better)
Translates to: SLPLRISLISSTLAGQTLGQTLM*GIWTGD
Trigger: ATCCCCTGTCCAGATCCCTCACATCAGGGTCTGCCC...CAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp GGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTGATGGACCCTGGGTGTaGATTGCCCTTCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GRLGGWGQCGQSHSARCADGPWV*IALLLA
Trigger: TGCCAGGAGAAGGGCAATTCACACCCAGGGTCCATC...AGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp TGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGGAGATCCGCCCTCCCTaGAAGCCCCGAGCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: CVLAGKIFRVGLDNQGVGEIRPP*KPRAAG
Trigger: GCCAGCGGCTCGGGGCTTGCAGGGAGGGCGGATCTC...CCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
CDS-3UTR GCA 90 bp GCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGAGATCCGCCCTCCCTaGAAGCCCCGAGCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: AGKIFRVGLDNQGVGSSVEIRPP*KPRAAG
Trigger: GCCAGCGGCTCGGGGCTTGCAGGGAGGGCGGATCTC...TACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
CDS-3UTR GCA 90 bp GTGAATTGCCCTTCTCCTGGCATCCTTGCATACTGGACAGTTTCAGCTCCATCTCCCGGCGTCTGGGGCTaGGGGTCCGACCCGAGATCC +
Preference number: 4 (lower is better)
Translates to: VNCPSPGILAYWTVSAPSPGVWG*GSDPRS
Trigger: GGATCTCGGGTCGGACCCGCAGCCCCAGACGCCGGG...AGATGGAGCTGAAACTGTCCAGTATGCAAGGATGCCAGGAGAAGGGCAATTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
CDS-3UTR GCA 90 bp GGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTCCTGTGGTGGCCACCTaGACAGCCACCTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: GSGELCRHRDGSLSEVQAPVVAT*TATSLD
Trigger: ATCCAAGGAGGTGGCTGTGCAGGTGGCCACCACAGG...AGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGATGTGAGGGATCTGGACCTCCTGACTCCGGAGTaGCCCAGCCTGTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: LPHFLHISGADPDVRDLDLLTPE*PSLWFL
Trigger: CAGGAACCACAGGCTGGGGCACTCCGGAGTCAGGAG...GTCCAGATCCCTCACATCAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS-3UTR GCA 90 bp ATGGATGGCATTGGCCACATCGGTAAACACCAGCCGGCTGGGTCTCTGCAGTGGGGCCGTGCCACCAGCTaGATCAGGGATTCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: MDGIGHIGKHQPAGSLQWGRATS*IRDSGV
Trigger: GACACCAGAATCCCTGATGCAGCTGGTGGCACGGCC...CCACTGCAGAGACCCAGCCGGCTGGTGTTTACCGATGTGGCCAATGCCATCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430746.5
CDS-3UTR GCA 90 bp GGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTGGCCGTGCCACCAGCTaGATCAGGGATTCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: GSGELCRHRDGSLSEVQAGRATS*IRDSGV
Trigger: GACACCAGAATCCCTGATGCAGCTGGTGGCACGGCC...AGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATTACCCACGCCGGCCGTaGCACCAGCTGCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: GLDNQGVGSSVGTVMGLYYPRRP*HQLHQG
Trigger: TCCCTGATGCAGCTGGTGGCACGGCCGGCGTGGGTA...ATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTACCCACGCCGGCCGTaGCACCAGCTGCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: DNQGVGSSVGTVMGLYQKYPRRP*HQLHQG
Trigger: TCCCTGATGCAGCTGGTGGCACGGCCGGCGTGGGTA...CTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS-3UTR GCA 90 bp TGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGTTTGCCCTGCATGGCCTaGACAGAAGTAGCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: WVAGRPPGPSVVWMDPGCLPCMA*TEVAAC
Trigger: ACAGGCTGCTACTTCTGTGCAGGCCATGCAGGGCAA...ACACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATGAGGGATGCCCTCTGTaGCAGGGCCCTCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GLDNQGVGSSVGTVMGLYEGCPL*QGPQVR
Trigger: CCTGACCTGAGGGCCCTGGCACAGAGGGCATCCCTC...ATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp AGGATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGCCAGTAACATCTGGTTaGCAAGGATGGGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RMGGWETSWTLRSMDGPWPVTSG*QGWVAG
Trigger: CCCAGCCACCCATCCTTGGCAACCAGATGTTACTGG...CCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp TGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGTCCATGGGCACACTCATaGACATGCATGAGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: WVAGRPPGPSVVWMDPGCPWAHS*TCMRPL
Trigger: GAGAGGCCTCATGCATGTGCATGAGTGTGCCCATGG...ACACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GCTGCCCTACCCTGTCCCTATAACTTGGGTGGTTTCCTCTCCCCACCCCAGAGGAGAGGAACCGTGCTGTaGGTGCTTCCCTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: AALPCPYNLGGFLSPPQRRGTVL*VLPSSL
Trigger: CAGGGAAGAGGGAAGCACGCACAGCACGGTTCCTCT...CCTCTGGGGTGGGGAGAGGAAACCACCCAAGTTATAGGGACAGGGTAGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp ATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGTGGAGAGAGGAACCGTaGTGTGCGTGCTTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: MGGWETSWTLRSMDGPWVWREEP*CACFPL
Trigger: AAGAGGGAAGCACGCACAGCACGGTTCCTCTCTCCA...CACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp ATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGGCAGCCTGTGATTACTaGCCTCAGACCAACAGCCTC +
Preference number: 4 (lower is better)
Translates to: MGGWETSWTLRSMDGPWVAACDY*PQTNSL
Trigger: GAGGCTGTTGGTCTGAGGGCAGTAATCACAGGCTGC...CACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CCTGACCCTCCAAGGCTTATGGAGAGGCCAAGTGCAGGGACCCATCTCCCCACTTATGGAGAGGCCAAGTaGAGGGACCCATCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: PDPPRLMERPSAGTHLPTYGEAK*RDPSPH
Trigger: GTGGGGAGATGGGTCCCTGCACTTGGCCTCTCCATA...AGTGGGGAGATGGGTCCCTGCACTTGGCCTCTCCATAAGCCTTGGAGGGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTACAAAACGCCGGCCGTaGCACCAGCTGCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: VEVDLEGGASVDNLILPATKRRP*HQLHQG
Trigger: TCCCTGATGCAGCTGGTGGCACGGCCGGCGTTTTGT...AGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441239.5
CDS-3UTR CCA 90 bp CCTGACCCTCCAAGGCTTATGGAGAGGCCAAGTGCAGGGACCCATCTCCCCACTAGGCTGGCCCATCTGTaGCAGGTTCCAGGTCAGACT +
Preference number: 4 (lower is better)
Translates to: PDPPRLMERPSAGTHLPTRLAHL*QVPGQT
Trigger: AGTCTGACCTGGAACCTGCCACAGATGGGCCAGCCT...AGTGGGGAGATGGGTCCCTGCACTTGGCCTCTCCATAAGCCTTGGAGGGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTAGGCTGGCCCATCTGTaGCAGGTTCCAGGTCAGACT +
Preference number: 4 (lower is better)
Translates to: GRLGGWGQCGQSHSARCARLAHL*QVPGQT
Trigger: AGTCTGACCTGGAACCTGCCACAGATGGGCCAGCCT...AGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGCTCTGCAGTGGGCCCTaGGAGGGCAGAGTAGTCTTG +
Preference number: 4 (lower is better)
Translates to: SLPLRISLISSTLAGQTLLCSGP*EGRVVL
Trigger: CAAGACTACTCTGCCCTCCCAGGGCCCACTGCAGAG...CAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GCTGCCCTACCCTGTCCCTATAACTTGGGTGGTTTCCTCTCCCCACCCCAGAGGGTCAGCAGGTGGGTCTaGAGAACAGCTAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: AALPCPYNLGGFLSPPQRVSRWV*RTARTW
Trigger: CCAGGTCCTAGCTGTTCTCCAGACCCACCTGCTGAC...CCTCTGGGGTGGGGAGAGGAAACCACCCAAGTTATAGGGACAGGGTAGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CCTGACCCTCCAAGGCTTATGGAGAGGCCAAGTGCAGGGACCCATCTCCCCACTTCTGGTTGCCAAGGATaGGTGGCTGGGAGACCTCCT +
Preference number: 4 (lower is better)
Translates to: PDPPRLMERPSAGTHLPTSGCQG*VAGRPP
Trigger: AGGAGGTCTCCCAGCCACCCATCCTTGGCAACCAGA...AGTGGGGAGATGGGTCCCTGCACTTGGCCTCTCCATAAGCCTTGGAGGGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CCTGACCCTCCAAGGCTTATGGAGAGGCCAAGTGCAGGGACCCATCTCCCCACTGGCCCCAGTAACATCTaGTTGCCAAGGATGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PDPPRLMERPSAGTHLPTGPSNI*LPRMGG
Trigger: GCCACCCATCCTTGGCAACCAGATGTTACTGGGGCC...AGTGGGGAGATGGGTCCCTGCACTTGGCCTCTCCATAAGCCTTGGAGGGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTTTCTGCCCGCTGTGCTaGGACAGGCACATGTCTGCC +
Preference number: 4 (lower is better)
Translates to: VEVDLEGGASVDNLILPAFCPLC*DRHMSA
Trigger: GGCAGACATGTGCCTGTCCCAGCACAGCGGGCAGAA...AGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTGGTCGACTTGGAGGGTaGGGCCAGTGTGGACAATCT +
Preference number: 4 (lower is better)
Translates to: GRLGGWGQCGQSHSARCAGRLGG*GQCGQS
Trigger: AGATTGTCCACACTGGCCCCACCCTCCAAGTCGACC...AGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp GACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCTGGAGTTCATGCTaGTGCGGAGAGGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: DNQGVGSSVGTVMGLYQKSWSSC*CGEGPG
Trigger: GCCAGGGCCCTCTCCGCATCAGCATGAACTCCAGGA...CTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS-3UTR TCA 90 bp ATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGCTTCAGAGTAGGTCTTaGCAATCAGGGAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: MGGWETSWTLRSMDGPWVLQSRS*QSGSGE
Trigger: CTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAG...CACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp ATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGATCTGGACAGGGGATaGGGAAGCCAGCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: IPPTPYLPHFLHISGADPDLDRG*GSQQRL
Trigger: GAGCCTCTGCTGGCTTCCTCATCCCCTGTCCAGATC...AGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp CAATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCGATCTGGACAGGGGATaGGGAAGCCAGCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: QSLPLRISLISSTLAGQTDLDRG*GSQQRL
Trigger: GAGCCTCTGCTGGCTTCCTCATCCCCTGTCCAGATC...GGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp CTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGATGTGAGGGATCTGGACGATCTGGACAGGGGATaGGGAAGCCAGCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LPHFLHISGADPDVRDLDDLDRG*GSQQRL
Trigger: GAGCCTCTGCTGGCTTCCTCATCCCCTGTCCAGATC...GTCCAGATCCCTCACATCAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GTGAATTGCCCTTCTCCTGGCATCCTTGCATACTGGACAGTTTCAGCTCCATCTGAGATCCGCCCTCCCTaGAAGCCCCGAGCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: VNCPSPGILAYWTVSAPSEIRPP*KPRAAG
Trigger: GCCAGCGGCTCGGGGCTTGCAGGGAGGGCGGATCTC...AGATGGAGCTGAAACTGTCCAGTATGCAAGGATGCCAGGAGAAGGGCAATTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
CDS-3UTR GCA 90 bp CCAGTGAAACAATGCAGTGGAGAGAGGAACCGTGCTGTGCGTGCTTCCCTCTTCCTCCTGACTCCGGAGTaGCCCAGCCTGTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: PVKQCSGERNRAVRASLFLLTPE*PSLWFL
Trigger: CAGGAACCACAGGCTGGGGCACTCCGGAGTCAGGAG...GAAGAGGGAAGCACGCACAGCACGGTTCCTCTCTCCACTGCATTGTTTCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCTCCTGACTCCGGAGTaGCCCAGCCTGTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: GLDNQGVGSSVGTVMGLYLLTPE*PSLWFL
Trigger: CAGGAACCACAGGCTGGGGCACTCCGGAGTCAGGAG...ATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGGCTTCCTAGGCCTTTCCCTCCTGACACATGGCATTTGCCCAGTGGAAGGTCTCCCTGGCTGAGAGGCTaGCTGATGCCAGTCAACCTG +
Preference number: 4 (lower is better)
Translates to: GLPRPFPPDTWHLPSGRSPWLRG*LMPVNL
Trigger: CAGGTTGACTGGCATCAGGCAGCCTCTCAGCCAGGG...AGACCTTCCACTGGGCAAATGCCATGTGTCAGGAGGGAAAGGCCTAGGAAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CAATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCGGCCGTGCCACCAGCTaGATCAGGGATTCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: QSLPLRISLISSTLAGQTGRATS*IRDSGV
Trigger: GACACCAGAATCCCTGATGCAGCTGGTGGCACGGCC...GGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGGCTTCCTAGGCCTTTCCCTCCTGACACATGGCATTTGCCCAGTGGAAGGTCTGGCCGTGCCACCAGCTaGATCAGGGATTCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: GLPRPFPPDTWHLPSGRSGRATS*IRDSGV
Trigger: GACACCAGAATCCCTGATGCAGCTGGTGGCACGGCC...AGACCTTCCACTGGGCAAATGCCATGTGTCAGGAGGGAAAGGCCTAGGAAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CTGGGAGGGCAGAGTAGTCTTGCCCTGCATGGCCTGCACAGAAGTAGCAGCCTGTTGCCCTGCATGGCCTaGACAGAAGTAGCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: LGGQSSLALHGLHRSSSLLPCMA*TEVAAC
Trigger: ACAGGCTGCTACTTCTGTGCAGGCCATGCAGGGCAA...CAGGCTGCTACTTCTGTGCAGGCCATGCAGGGCAAGACTACTCTGCCCTCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430746.5
CDS-3UTR GCA 90 bp GTGAATTGCCCTTCTCCTGGCATCCTTGCATACTGGACAGTTTCAGCTCCATCTAGCCGGCTGGGTCTCTaGAGTGGGCCCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: VNCPSPGILAYWTVSAPSSRLGL*SGPWEG
Trigger: GCCCTCCCAGGGCCCACTGCAGAGACCCAGCCGGCT...AGATGGAGCTGAAACTGTCCAGTATGCAAGGATGCCAGGAGAAGGGCAATTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CCCTCTTGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAAGCCGGCTGGGTCTCTaGAGTGGGCCCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PSCVLAGKIFRVGLDNQGSRLGL*SGPWEG
Trigger: GCCCTCCCAGGGCCCACTGCAGAGACCCAGCCGGCT...TCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACAAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp ATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTTCTCAGCATGAGGGATaGCCTCTGTGCCAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: IPPTPYLPHFLHISGADPSQHEG*PLCQGP
Trigger: AGGGCCCTGGCACAGAGGGCATCCCTCATGCTGAGA...AGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CAATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCTCTCAGCATGAGGGATaGCCTCTGTGCCAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: QSLPLRISLISSTLAGQTSQHEG*PLCQGP
Trigger: AGGGCCCTGGCACAGAGGGCATCCCTCATGCTGAGA...GGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp TCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTGGCCATGGGCACACTCATaGACATGCATGAGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: STWRVGPVWTISFCPLCWPWAHS*TCMRPL
Trigger: GAGAGGCCTCATGCATGTGCATGAGTGTGCCCATGG...CCAGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CTGCTCTTGTGGTCTGTCTCTGCCCAATGGCTTGCCAGGACCCCTGGTATCAGCGGACAGGCACATGTCTaGCCATGGGCACACTCATGC +
Preference number: 4 (lower is better)
Translates to: LLLWSVSAQWLARTPGISGQAHV*PWAHSC
Trigger: GCATGAGTGTGCCCATGGGCAGACATGTGCCTGTCC...GCTGATACCAGGGGTCCTGGCAAGCCATTGGGCAGAGACAGACCACAAGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CCTGACCCTCCAAGGCTTATGGAGAGGCCAAGTGCAGGGACCCATCTCCCCACTTCATTCTGCCCGCTGTaGTGGGACAGGCACATGTCT +
Preference number: 4 (lower is better)
Translates to: PDPPRLMERPSAGTHLPTSFCPL*WDRHMS
Trigger: AGACATGTGCCTGTCCCAGCACAGCGGGCAGAATGA...AGTGGGGAGATGGGTCCCTGCACTTGGCCTCTCCATAAGCCTTGGAGGGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTTCATTCTGCCCGCTGTaGTGGGACAGGCACATGTCT +
Preference number: 4 (lower is better)
Translates to: GRLGGWGQCGQSHSARCASFCPL*WDRHMS
Trigger: AGACATGTGCCTGTCCCAGCACAGCGGGCAGAATGA...AGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTTGGAGAGAGGAACCGTaGTGTGCGTGCTTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: GRLGGWGQCGQSHSARCAWREEP*CACFPL
Trigger: AAGAGGGAAGCACGCACAGCACGGTTCCTCTCTCCA...AGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CTGCTCTTGTGGTCTGTCTCTGCCCAATGGCTTGCCAGGACCCCTGGTATCAGCTGCATACACTACCCCTaGATCCCCTCCAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LLLWSVSAQWLARTPGISCIHYP*IPSSQQ
Trigger: CTGCTGGCTGGAGGGGATGCAGGGGTAGTGTATGCA...GCTGATACCAGGGGTCCTGGCAAGCCATTGGGCAGAGACAGACCACAAGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GCTGCCCTACCCTGTCCCTATAACTTGGGTGGTTTCCTCTCCCCACCCCAGAGGGCCCAGTGGAAGGTCTaGATACACTACCCCTGCATC +
Preference number: 4 (lower is better)
Translates to: AALPCPYNLGGFLSPPQRAQWKV*IHYPCI
Trigger: GATGCAGGGGTAGTGTATGCAGACCTTCCACTGGGC...CCTCTGGGGTGGGGAGAGGAAACCACCCAAGTTATAGGGACAGGGTAGGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GCTGCCCTACCCTGTCCCTATAACTTGGGTGGTTTCCTCTCCCCACCCCAGAGGCCAGCCCCTAGCAGATaGGGTCCTGGAGTTCATGTT +
Preference number: 4 (lower is better)
Translates to: AALPCPYNLGGFLSPPQRPAPSR*GPGVHV
Trigger: AACATGAACTCCAGGACCGCATCTGCTAGGGGCTGG...CCTCTGGGGTGGGGAGAGGAAACCACCCAAGTTATAGGGACAGGGTAGGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441239.5
CDS-3UTR GCA 90 bp GGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTTGCCTTCCTGGGTGCTaGTTTCCTGGTTCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: GRLGGWGQCGQSHSARCACLPGC*FPGSSH
Trigger: GTGAGAGGAACCAGGAAAGCAGCACCCAGGAAGGCA...AGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449241.5
CDS-3UTR CCA 90 bp CCCTCTTGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGACGGCCTGAGCTAGGGTaGGTAGGGCCGGGACCCACG +
Preference number: 4 (lower is better)
Translates to: PSCVLAGKIFRVGLDNQGRPELG*VGPGPT
Trigger: CGTGGGTCCCGGCCCTACCCACCCTAGCTCAGGCCG...TCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACAAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357203.8
CDS-3UTR CCA 90 bp TGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGCGCATCCGCGAGCGCTaGCTCTGCCGGCCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: CVLAGKIFRVGLDNQGVGRIRER*LCRPEL
Trigger: TAGCTCAGGCCGGCAGAGCCAGCGCTCGCGGATGCG...CCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000430746.5
ENST00000441239.5
CDS-3UTR CCA 90 bp ATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGCACAGCCACCTCCTTaGATAAAGGGAGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: IPPTPYLPHFLHISGADPAQPPP*IKGAPC
Trigger: GCAGGGGGCTCCCTTTATCCAAGGAGGTGGCTGTGC...AGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGATGTGAGGGATCTGGACGCACAGCCACCTCCTTaGATAAAGGGAGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LPHFLHISGADPDVRDLDAQPPP*IKGAPC
Trigger: GCAGGGGGCTCCCTTTATCCAAGGAGGTGGCTGTGC...GTCCAGATCCCTCACATCAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CCCAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGGGTTCCTGCCACCTGTaGTGGCCACCTGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: PNPRSSLEPKTGSRFQKQGSCHL*WPPAQP
Trigger: TGGCTGTGCAGGTGGCCACCACAGGTGGCAGGAACC...CTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CAATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCAGTGGTCTCGGAGGCTaGCCCATCTGTGGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: QSLPLRISLISSTLAGQTSGLGG*PICGRF
Trigger: GAACCTGCCACAGATGGGCCAGCCTCCGAGACCACT...GGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGACAGGGGATGAGGAAGCCAGCAGAGGCTCTTGACCTTCTCAGCATGAGGGATAGTGGTCTCGGAGGCTaGCCCATCTGTGGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: GQGMRKPAEALDLLSMRDSGLGG*PICGRF
Trigger: GAACCTGCCACAGATGGGCCAGCCTCCGAGACCACT...ATCCCTCATGCTGAGAAGGTCAAGAGCCTCTGCTGGCTTCCTCATCCCCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp ATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTAGTGGTCTCGGAGGCTaGCCCATCTGTGGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: IPPTPYLPHFLHISGADPSGLGG*PICGRF
Trigger: GAACCTGCCACAGATGGGCCAGCCTCCGAGACCACT...AGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CATGGGGTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCAAAGGACAGAAGCATaGTACCCACGCCGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: HGVEVDLEGGASVDNLILQRTEA*YPRRPC
Trigger: GCACGGCCGGCGTGGGTACCATGCTTCTGTCCTTTG...CAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTACCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp ATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTCAAAGGACAGAAGCATaGTACCCACGCCGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: IPPTPYLPHFLHISGADPQRTEA*YPRRPC
Trigger: GCACGGCCGGCGTGGGTACCATGCTTCTGTCCTTTG...AGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTGGTACATGGGCATGAGCTaGTGGCGTAGCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: STWRVGPVWTISFCPLCWYMGMS*WRSFSS
Trigger: GCTGGAGAAGCTACGCCACCAGCTCATGCCCATGTA...CCAGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGATGTGAGGGATCTGGACCTCTGCAGTGGGCCCTaGGAGGGCAGAGTAGTCTTG +
Preference number: 4 (lower is better)
Translates to: LPHFLHISGADPDVRDLDLCSGP*EGRVVL
Trigger: CAAGACTACTCTGCCCTCCCAGGGCCCACTGCAGAG...GTCCAGATCCCTCACATCAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CTGCTCTTGTGGTCTGTCTCTGCCCAATGGCTTGCCAGGACCCCTGGTATCAGCGTCAGCAGGTGGGTCTaGAGAACAGCTAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: LLLWSVSAQWLARTPGISVSRWV*RTARTW
Trigger: CCAGGTCCTAGCTGTTCTCCAGACCCACCTGCTGAC...GCTGATACCAGGGGTCCTGGCAAGCCATTGGGCAGAGACAGACCACAAGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TGTGGACAATCTCATTCTGCCCGCTGTGCTGGGACAGGCACATGTCTGCCCATGGTTGCCAAGGATGGGTaGCTGGGAGACCTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: CGQSHSARCAGTGTCLPMVAKDG*LGDLLD
Trigger: GTCCAGGAGGTCTCCCAGCCACCCATCCTTGGCAAC...CATGGGCAGACATGTGCCTGTCCCAGCACAGCGGGCAGAATGAGATTGTCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGGGCCCCAGTAACATCTaGTTGCCAAGGATGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SLPLRISLISSTLAGQTLGPSNI*LPRMGG
Trigger: GCCACCCATCCTTGGCAACCAGATGTTACTGGGGCC...CAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TGTGGACAATCTCATTCTGCCCGCTGTGCTGGGACAGGCACATGTCTGCCCATGTTCTGCCCGCTGTGCTaGGACAGGCACATGTCTGCC +
Preference number: 4 (lower is better)
Translates to: CGQSHSARCAGTGTCLPMFCPLC*DRHMSA
Trigger: GGCAGACATGTGCCTGTCCCAGCACAGCGGGCAGAA...CATGGGCAGACATGTGCCTGTCCCAGCACAGCGGGCAGAATGAGATTGTCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGGGTCGACTTGGAGGGTaGGGCCAGTGTGGACAATCT +
Preference number: 4 (lower is better)
Translates to: SLPLRISLISSTLAGQTLGRLGG*GQCGQS
Trigger: AGATTGTCCACACTGGCCCCACCCTCCAAGTCGACC...CAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTACCCTCCAAGGCTTATaGAGAGGCCAAGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GRLGGWGQCGQSHSARCATLQGL*RGQVQG
Trigger: TCCCTGCACTTGGCCTCTCCATAAGCCTTGGAGGGT...AGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGTCTGTCTCTGCCCAATaGCTTGCCAGGACCCCTGGT +
Preference number: 4 (lower is better)
Translates to: SLPLRISLISSTLAGQTLSVSAQ*LARTPG
Trigger: ACCAGGGGTCCTGGCAAGCCATTGGGCAGAGACAGA...CAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TGTGGACAATCTCATTCTGCCCGCTGTGCTGGGACAGGCACATGTCTGCCCATGAGCCCCCTGCCTTCCTaGGTGTTAATCCTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: CGQSHSARCAGTGTCLPMSPLPS*VLILSR
Trigger: CCGGGAGAGGATTAACACCCAGGAAGGCAGGGGGCT...CATGGGCAGACATGTGCCTGTCCCAGCACAGCGGGCAGAATGAGATTGTCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426034.5
CDS-3UTR CCA 90 bp TGTGGACAATCTCATTCTGCCCGCTGTGCTGGGACAGGCACATGTCTGCCCATGAGCCCCCTGCCTTCCTaGGTGCTGCTTTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: CGQSHSARCAGTGTCLPMSPLPS*VLLSWF
Trigger: GAACCAGGAAAGCAGCACCCAGGAAGGCAGGGGGCT...CATGGGCAGACATGTGCCTGTCCCAGCACAGCGGGCAGAATGAGATTGTCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449241.5
CDS-3UTR TCA 90 bp GGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTAGTTGTACATGGGCATaGGCTGGTGGCGTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GRLGGWGQCGQSHSARCASCTWA*AGGVAS
Trigger: AGAAGCTACGCCACCAGCTCATGCCCATGTACAACT...AGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp GCTGCCCTACCCTGTCCCTATAACTTGGGTGGTTTCCTCTCCCCACCCCAGAGGAGTTGTACATGGGCATaGGCTGGTGGCGTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: AALPCPYNLGGFLSPPQRSCTWA*AGGVAS
Trigger: AGAAGCTACGCCACCAGCTCATGCCCATGTACAACT...CCTCTGGGGTGGGGAGAGGAAACCACCCAAGTTATAGGGACAGGGTAGGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp GGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATGGGCAGACCCTGATGTaGGGGATCTGGACAGGGGAT +
Preference number: 4 (lower is better)
Translates to: GLDNQGVGSSVGTVMGLYGQTLM*GIWTGD
Trigger: ATCCCCTGTCCAGATCCCTCACATCAGGGTCTGCCC...ATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp GGGCTTCCTAGGCCTTTCCCTCCTGACACATGGCATTTGCCCAGTGGAAGGTCTGATGGACCCTGGGTGTaGATTGCCCTTCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GLPRPFPPDTWHLPSGRSDGPWV*IALLLA
Trigger: TGCCAGGAGAAGGGCAATTCACACCCAGGGTCCATC...AGACCTTCCACTGGGCAAATGCCATGTGTCAGGAGGGAAAGGCCTAGGAAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR TCA 90 bp GGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCAAGGAGAGGAGGCCCTaGGGAACCCAGCAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: GKIFRVGLDNQGVGSSVGKERRP*GTQQPF
Trigger: GAAGGGCTGCTGGGTTCCTCAGGGCCTCCTCTCCTT...GCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422619.1
CDS-3UTR GCA 90 bp GGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCCTGTGGTGGCCACCTaGACAGCCACCTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: GLDNQGVGSSVGTVMGLYPVVAT*TATSLD
Trigger: ATCCAAGGAGGTGGCTGTGCAGGTGGCCACCACAGG...ATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGCCCTGGCTGAGAGGCTaGCTGATGCCAGTCAACCTG +
Preference number: 4 (lower is better)
Translates to: DNQGVGSSVGTVMGLYQKPWLRG*LMPVNL
Trigger: CAGGTTGACTGGCATCAGGCAGCCTCTCAGCCAGGG...CTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS-3UTR GCA 90 bp TGTGGACAATCTCATTCTGCCCGCTGTGCTGGGACAGGCACATGTCTGCCCATGCCAGCCCCTAGCAGATaGGGTCCTGGAGTTCATGCT +
Preference number: 4 (lower is better)
Translates to: CGQSHSARCAGTGTCLPMPAPSR*GPGVHA
Trigger: AGCATGAACTCCAGGACCGCATCTGCTAGGGGCTGG...CATGGGCAGACATGTGCCTGTCCCAGCACAGCGGGCAGAATGAGATTGTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CAATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCCAGCCCCTAGCAGATaGGGTCCTGGAGTTCATGCT +
Preference number: 4 (lower is better)
Translates to: QSLPLRISLISSTLAGQTPAPSR*GPGVHA
Trigger: AGCATGAACTCCAGGACCGCATCTGCTAGGGGCTGG...GGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGAGGGATGCCCTCTGTaGCAGGGCCCTCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: AGKIFRVGLDNQGVGSSVEGCPL*QGPQVR
Trigger: CCTGACCTGAGGGCCCTGGCACAGAGGGCATCCCTC...TACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp TGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGGAGGGATGCCCTCTGTaGCAGGGCCCTCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: CVLAGKIFRVGLDNQGVGEGCPL*QGPQVR
Trigger: CCTGACCTGAGGGCCCTGGCACAGAGGGCATCCCTC...CCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CCTGACCCTCCAAGGCTTATGGAGAGGCCAAGTGCAGGGACCCATCTCCCCACTACCCTGGGTGTGAATTaGCCTTCTCCTGGCATCCTT +
Preference number: 4 (lower is better)
Translates to: PDPPRLMERPSAGTHLPTTLGVN*PSPGIL
Trigger: AAGGATGCCAGGAGAAGGGCAATTCACACCCAGGGT...AGTGGGGAGATGGGTCCCTGCACTTGGCCTCTCCATAAGCCTTGGAGGGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGTCAGGAGAAGTCAGTGGTCAGAAGTCCAGCCTGGCTAGGGCCCTCTCTTAGAGGACAGGCACATGTCTaGCCATGGGCACACTCATGC +
Preference number: 4 (lower is better)
Translates to: GQEKSVVRSPAWLGPSLRGQAHV*PWAHSC
Trigger: GCATGAGTGTGCCCATGGGCAGACATGTGCCTGTCC...TCTAAGAGAGGGCCCTAGCCAGGCTGGACTTCTGACCACTGACTTCTCCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CATGGGGTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGGGACAGGCACATGTCTaGCCATGGGCACACTCATGC +
Preference number: 4 (lower is better)
Translates to: HGVEVDLEGGASVDNLILGQAHV*PWAHSC
Trigger: GCATGAGTGTGCCCATGGGCAGACATGTGCCTGTCC...CAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTACCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTTGGAGAGAGGAACCGTaGTGTGCGTGCTTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: VEVDLEGGASVDNLILPAWREEP*CACFPL
Trigger: AAGAGGGAAGCACGCACAGCACGGTTCCTCTCTCCA...AGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTGCAGCCTGTGATTACTaGCCTCAGACCAACAGCCTC +
Preference number: 4 (lower is better)
Translates to: GSGELCRHRDGSLSEVQAAACDY*PQTNSL
Trigger: GAGGCTGTTGGTCTGAGGGCAGTAATCACAGGCTGC...AGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGATGTGAGGGATCTGGACCTCTGCCCAATGGCTTaGCAGGACCCCTGGTATCAG +
Preference number: 4 (lower is better)
Translates to: LPHFLHISGADPDVRDLDLCPMA*QDPWYQ
Trigger: CTGATACCAGGGGTCCTGGCAAGCCATTGGGCAGAG...GTCCAGATCCCTCACATCAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp TGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGTCGGGACATGCCTCTGTaGATGCTTGTGTGCATATGT +
Preference number: 4 (lower is better)
Translates to: WVAGRPPGPSVVWMDPGCRDMPL*MLVCIC
Trigger: ACATATGCACACAAGCATGCACAGAGGCATGTCCCG...ACACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGACAGGGGATGAGGAAGCCAGCAGAGGCTCTTGACCTTCTCAGCATGAGGGATGCTGGGCACGGGACATaGCTCTGTGCATGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: GQGMRKPAEALDLLSMRDAGHGT*LCACLC
Trigger: ACACAAGCATGCACAGAGGCATGTCCCGTGCCCAGC...ATCCCTCATGCTGAGAAGGTCAAGAGCCTCTGCTGGCTTCCTCATCCCCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp ATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGGCTCTCACGTGGAGCTaGTCTGGGTTAAATTACAGC +
Preference number: 4 (lower is better)
Translates to: MGGWETSWTLRSMDGPWVALTWS*SGLNYS
Trigger: GCTGTAATTTAACCCAGAGCAGCTCCACGTGAGAGC...CACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTATAAAGGGAGCCCCCTaGCTTCCTGGGTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: GSGELCRHRDGSLSEVQAIKGAP*LPGCCF
Trigger: AAAGCAGCACCCAGGAAGGCAGGGGGCTCCCTTTAT...AGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449241.5
CDS-3UTR CCA 90 bp TTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGATGCGGAGAGGGCCCTaGCTGAGAGGCTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: FRVGLDNQGVGSSVGTVMMRRGP*LRGCLM
Trigger: CATCAGGCAGCCTCTCAGCCAGGGCCCTCTCCGCAT...CATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGGTATGCGGAGAGGGCCCTaGCTGAGAGGCTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: QPQILIRAQDREPFSEAGMRRGP*LRGCLM
Trigger: CATCAGGCAGCCTCTCAGCCAGGGCCCTCTCCGCAT...ACCTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CATGGGGTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGAGGCTGGCCCATCTGTaGCAGGTTCCAGGTCAGACT +
Preference number: 4 (lower is better)
Translates to: HGVEVDLEGGASVDNLILRLAHL*QVPGQT
Trigger: AGTCTGACCTGGAACCTGCCACAGATGGGCCAGCCT...CAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTACCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGTCAGGAGAAGTCAGTGGTCAGAAGTCCAGCCTGGCTAGGGCCCTCTCTTAGAAGGCTGGCCCATCTGTaGCAGGTTCCAGGTCAGACT +
Preference number: 4 (lower is better)
Translates to: GQEKSVVRSPAWLGPSLRRLAHL*QVPGQT
Trigger: AGTCTGACCTGGAACCTGCCACAGATGGGCCAGCCT...TCTAAGAGAGGGCCCTAGCCAGGCTGGACTTCTGACCACTGACTTCTCCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGCAAAGGACAGAAGCATaGTACCCACGCCGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: DNQGVGSSVGTVMGLYQKQRTEA*YPRRPC
Trigger: GCACGGCCGGCGTGGGTACCATGCTTCTGTCCTTTG...CTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTTGTCCCAGGCCAATGGGCATGAGCTGGTaGCGTAGCTTCTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LCRHRDGSLSEVQACPRPMGMSW*RSFSSL
Trigger: GAGGCTGGAGAAGCTACGCCACCAGCTCATGCCCAT...TGGCCTGGGACAAGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCTCTGCAGTGGGCCCTaGGAGGGCAGAGTAGTCTTG +
Preference number: 4 (lower is better)
Translates to: GLDNQGVGSSVGTVMGLYLCSGP*EGRVVL
Trigger: CAAGACTACTCTGCCCTCCCAGGGCCCACTGCAGAG...ATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CATGGGGTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCAGGCCACTCACGCATaGATGGCATTGGCCACATCG +
Preference number: 4 (lower is better)
Translates to: HGVEVDLEGGASVDNLILQATHA*MALATS
Trigger: CGATGTGGCCAATGCCATCCATGCGTGAGTGGCCTG...CAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTACCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGACAGGGGATGAGGAAGCCAGCAGAGGCTCTTGACCTTCTCAGCATGAGGGATCAGGCCACTCACGCATaGATGGCATTGGCCACATCG +
Preference number: 4 (lower is better)
Translates to: GQGMRKPAEALDLLSMRDQATHA*MALATS
Trigger: CGATGTGGCCAATGCCATCCATGCGTGAGTGGCCTG...ATCCCTCATGCTGAGAAGGTCAAGAGCCTCTGCTGGCTTCCTCATCCCCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGGGACCCTCCGTAGTATaGATGGACCCTGGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: SLPLRISLISSTLAGQTLGPSVV*MDPGCE
Trigger: TTCACACCCAGGGTCCATCCATACTACGGAGGGTCC...CAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTGGACCCTCCGTAGTATaGATGGACCCTGGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: GSGELCRHRDGSLSEVQAGPSVV*MDPGCE
Trigger: TTCACACCCAGGGTCCATCCATACTACGGAGGGTCC...AGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGATGTGAGGGATCTGGACGGCTGGGAGACCTCCTaGACCCTCCGTAGTATGGAT +
Preference number: 4 (lower is better)
Translates to: LPHFLHISGADPDVRDLDGWETS*TLRSMD
Trigger: ATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCC...GTCCAGATCCCTCACATCAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGGTTGCCAAGGATGGGTaGCTGGGAGACCTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: DNQGVGSSVGTVMGLYQKVAKDG*LGDLLD
Trigger: GTCCAGGAGGTCTCCCAGCCACCCATCCTTGGCAAC...CTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGTCAGGAGAAGTCAGTGGTCAGAAGTCCAGCCTGGCTAGGGCCCTCTCTTAGATCTGGTTGCCAAGGATaGGTGGCTGGGAGACCTCCT +
Preference number: 4 (lower is better)
Translates to: GQEKSVVRSPAWLGPSLRSGCQG*VAGRPP
Trigger: AGGAGGTCTCCCAGCCACCCATCCTTGGCAACCAGA...TCTAAGAGAGGGCCCTAGCCAGGCTGGACTTCTGACCACTGACTTCTCCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CAATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCAGGGTGGGGCCAGTGTaGACAATCTCATTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: QSLPLRISLISSTLAGQTRVGPV*TISFCP
Trigger: CGGGCAGAATGAGATTGTCCACACTGGCCCCACCCT...GGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGTCAGGAGAAGTCAGTGGTCAGAAGTCCAGCCTGGCTAGGGCCCTCTCTTAGAAGGGTGGGGCCAGTGTaGACAATCTCATTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: GQEKSVVRSPAWLGPSLRRVGPV*TISFCP
Trigger: CGGGCAGAATGAGATTGTCCACACTGGCCCCACCCT...TCTAAGAGAGGGCCCTAGCCAGGCTGGACTTCTGACCACTGACTTCTCCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGTCAGGAGAAGTCAGTGGTCAGAAGTCCAGCCTGGCTAGGGCCCTCTCTTAGAGGTCGACTTGGAGGGTaGGGCCAGTGTGGACAATCT +
Preference number: 4 (lower is better)
Translates to: GQEKSVVRSPAWLGPSLRGRLGG*GQCGQS
Trigger: AGATTGTCCACACTGGCCCCACCCTCCAAGTCGACC...TCTAAGAGAGGGCCCTAGCCAGGCTGGACTTCTGACCACTGACTTCTCCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGGCTTCCTAGGCCTTTCCCTCCTGACACATGGCATTTGCCCAGTGGAAGGTCTGGTCGACTTGGAGGGTaGGGCCAGTGTGGACAATCT +
Preference number: 4 (lower is better)
Translates to: GLPRPFPPDTWHLPSGRSGRLGG*GQCGQS
Trigger: AGATTGTCCACACTGGCCCCACCCTCCAAGTCGACC...AGACCTTCCACTGGGCAAATGCCATGTGTCAGGAGGGAAAGGCCTAGGAAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp AGGATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGCTCCACTACATACCATaGGGTAGAGGTCGACTTGGA +
Preference number: 4 (lower is better)
Translates to: RMGGWETSWTLRSMDGPWLHYIP*GRGRLG
Trigger: TCCAAGTCGACCTCTACCCCATGGTATGTAGTGGAG...CCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTGGGGCTCTTCCCATAGATaGGATGGAGGTGGGGAATTC +
Preference number: 4 (lower is better)
Translates to: STWRVGPVWTISFCPLCWGSSHR*DGGGEF
Trigger: GAATTCCCCACCTCCATCCCATCTATGGGAAGAGCC...CCAGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TGTGGACAATCTCATTCTGCCCGCTGTGCTGGGACAGGCACATGTCTGCCCATGTCTGTCTCTGCCCAATaGCTTGCCAGGACCCCTGGT +
Preference number: 4 (lower is better)
Translates to: CGQSHSARCAGTGTCLPMSVSAQ*LARTPG
Trigger: ACCAGGGGTCCTGGCAAGCCATTGGGCAGAGACAGA...CATGGGCAGACATGTGCCTGTCCCAGCACAGCGGGCAGAATGAGATTGTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CCTGACCCTCCAAGGCTTATGGAGAGGCCAAGTGCAGGGACCCATCTCCCCACTTTCCCTCCTGACACATaGCATTTGCCCAGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: PDPPRLMERPSAGTHLPTFPPDT*HLPSGR
Trigger: CCTTCCACTGGGCAAATGCCATGTGTCAGGAGGGAA...AGTGGGGAGATGGGTCCCTGCACTTGGCCTCTCCATAAGCCTTGGAGGGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTTGTCCCAGGCCACCAGAACCTTCCCCATaGGGGCTTCCTAGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: LCRHRDGSLSEVQACPRPPEPSP*GLPRPF
Trigger: GAAAGGCCTAGGAAGCCCCCATGGGGAAGGTTCTGG...TGGCCTGGGACAAGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
3UTR CAA 72 bp CCCATAACAGATGCTGCCCTACCCTGTCCCTATAACTaGGGTGGTTTCCTCTCCCCACCCCAGAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PITDAALPCPYN*GGFLSPPQRRL
Trigger: GAGCCTCCTCTGGGGTGGGGAGAGGAAACCACCCAAGTTATAGGGACAGGGTAGGGCAGCATCTGTTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp CAATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCTTGACCTTCTCAGCATaGGGGATGCCCTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: QSLPLRISLISSTLAGQTLTFSA*GMPSVP
Trigger: TGGCACAGAGGGCATCCCTCATGCTGAGAAGGTCAA...GGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp CTGGGCTTCTCAGGGCCCATAACAGATGCTGCCCTACCCTGTCCCTATAACTTGACTCATGCACATGCATaGGGCCTCTCGGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LGFSGPITDAALPCPYNLTHAHA*GLSAGL
Trigger: CAGACCTGCCGAGAGGCCTCATGCATGTGCATGAGT...CAAGTTATAGGGACAGGGTAGGGCAGCATCTGTTATGGGCCCTGAGAAGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp CCCAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGCCCTGGTATCAGCCCTaGCCCTCCAAGGCTTATGGA +
Preference number: 4 (lower is better)
Translates to: PNPRSSLEPKTGSRFQKQPWYQP*PSKAYG
Trigger: TCCATAAGCCTTGGAGGGTCAGGGCTGATACCAGGG...CTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR TCA 90 bp GGACAGGGGATGAGGAAGCCAGCAGAGGCTCTTGACCTTCTCAGCATGAGGGATCAGCTGTATGCATCCTaGATTCCTGGCAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GQGMRKPAEALDLLSMRDQLYAS*IPGSLQ
Trigger: CTGGAGGCTGCCAGGAATTCAGGATGCATACAGCTG...ATCCCTCATGCTGAGAAGGTCAAGAGCCTCTGCTGGCTTCCTCATCCCCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR TCA 90 bp CTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGATGTGAGGGATCTGGACGCCTCTTCTTCTTCCTaGTGTACAAAACGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: LPHFLHISGADPDVRDLDASSSS*CTKRRP
Trigger: CGGCCGGCGTTTTGTACATCAGGAAGAAGAAGAGGC...GTCCAGATCCCTCACATCAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441239.5
CDS-3UTR GCA 90 bp GTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCCCTGTGGTGGCCACCTaGACAGCCACCTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: VLAGKIFRVGLDNQGVGSPVVAT*TATSLD
Trigger: ATCCAAGGAGGTGGCTGTGCAGGTGGCCACCACAGG...GCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGCCAGCCCCTAGCAGATaGGGTCCTGGAGTTCATGCT +
Preference number: 4 (lower is better)
Translates to: DNQGVGSSVGTVMGLYQKPAPSR*GPGVHA
Trigger: AGCATGAACTCCAGGACCGCATCTGCTAGGGGCTGG...CTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS-3UTR GCA 90 bp ATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGGGCCGTGCCACCAGCTaGATCAGGGATTCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: IFRVGLDNQGVGSSVGTVGRATS*IRDSGV
Trigger: GACACCAGAATCCCTGATGCAGCTGGTGGCACGGCC...CACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp TGTGGACAATCTCATTCTGCCCGCTGTGCTGGGACAGGCACATGTCTGCCCATGTTGCCCTGCATGGCCTaGACAGAAGTAGCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: CGQSHSARCAGTGTCLPMLPCMA*TEVAAC
Trigger: ACAGGCTGCTACTTCTGTGCAGGCCATGCAGGGCAA...CATGGGCAGACATGTGCCTGTCCCAGCACAGCGGGCAGAATGAGATTGTCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGGCTTCCTAGGCCTTTCCCTCCTGACACATGGCATTTGCCCAGTGGAAGGTCTTTGCCCTGCATGGCCTaGACAGAAGTAGCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: GLPRPFPPDTWHLPSGRSLPCMA*TEVAAC
Trigger: ACAGGCTGCTACTTCTGTGCAGGCCATGCAGGGCAA...AGACCTTCCACTGGGCAAATGCCATGTGTCAGGAGGGAAAGGCCTAGGAAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTAGAGTAGTCTTGCCCTaGATGGCCTGCACAGAAGTA +
Preference number: 4 (lower is better)
Translates to: GRLGGWGQCGQSHSARCARVVLP*MACTEV
Trigger: TACTTCTGTGCAGGCCATGCAGGGCAAGACTACTCT...AGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTCAGCATGAGGGATaGCCTCTGTGCCAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: VLAGKIFRVGLDNQGVGSSQHEG*PLCQGP
Trigger: AGGGCCCTGGCACAGAGGGCATCCCTCATGCTGAGA...GCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTTGTCCCAGGCCAAGGGCCCATAACAGATaGTGCCCTACCCTGTCCCTA +
Preference number: 4 (lower is better)
Translates to: LCRHRDGSLSEVQACPRPRAHNR*CPTLSL
Trigger: TAGGGACAGGGTAGGGCAGCATCTGTTATGGGCCCT...TGGCCTGGGACAAGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGATGTGAGGGATCTGGACAGGGCCCATAACAGATaGTGCCCTACCCTGTCCCTA +
Preference number: 4 (lower is better)
Translates to: LPHFLHISGADPDVRDLDRAHNR*CPTLSL
Trigger: TAGGGACAGGGTAGGGCAGCATCTGTTATGGGCCCT...GTCCAGATCCCTCACATCAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTACCCTGGGTGTGAATTaGCCTTCTCCTGGCATCCTT +
Preference number: 4 (lower is better)
Translates to: GSGELCRHRDGSLSEVQATLGVN*PSPGIL
Trigger: AAGGATGCCAGGAGAAGGGCAATTCACACCCAGGGT...AGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTTGTCCCAGGCCACCAGTAACATCTGGTTaGCAAGGATGGGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LCRHRDGSLSEVQACPRPPVTSG*QGWVAG
Trigger: CCCAGCCACCCATCCTTGGCAACCAGATGTTACTGG...TGGCCTGGGACAAGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp ATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTCCAGTAACATCTGGTTaGCAAGGATGGGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: IPPTPYLPHFLHISGADPPVTSG*QGWVAG
Trigger: CCCAGCCACCCATCCTTGGCAACCAGATGTTACTGG...AGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CCCAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGGCACACTCATGCACATaGATGAGGCCTCTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: PNPRSSLEPKTGSRFQKQAHSCT*MRPLGR
Trigger: CCTGCCGAGAGGCCTCATGCATGTGCATGAGTGTGC...CTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp ATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTCCATGGGCACACTCATaGACATGCATGAGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: IPPTPYLPHFLHISGADPPWAHS*TCMRPL
Trigger: GAGAGGCCTCATGCATGTGCATGAGTGTGCCCATGG...AGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGGCTTCCTAGGCCTTTCCCTCCTGACACATGGCATTTGCCCAGTGGAAGGTCTCCATGGGCACACTCATaGACATGCATGAGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GLPRPFPPDTWHLPSGRSPWAHS*TCMRPL
Trigger: GAGAGGCCTCATGCATGTGCATGAGTGTGCCCATGG...AGACCTTCCACTGGGCAAATGCCATGTGTCAGGAGGGAAAGGCCTAGGAAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CTGGGCTTCTCAGGGCCCATAACAGATGCTGCCCTACCCTGTCCCTATAACTTGAGAGGAACCGTGCTGTaGGTGCTTCCCTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: LGFSGPITDAALPCPYNLRGTVL*VLPSSL
Trigger: CAGGGAAGAGGGAAGCACGCACAGCACGGTTCCTCT...CAAGTTATAGGGACAGGGTAGGGCAGCATCTGTTATGGGCCCTGAGAAGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGACAGGGGATGAGGAAGCCAGCAGAGGCTCTTGACCTTCTCAGCATGAGGGATGCAGCCTGTGATTACTaGCCTCAGACCAACAGCCTC +
Preference number: 4 (lower is better)
Translates to: GQGMRKPAEALDLLSMRDAACDY*PQTNSL
Trigger: GAGGCTGTTGGTCTGAGGGCAGTAATCACAGGCTGC...ATCCCTCATGCTGAGAAGGTCAAGAGCCTCTGCTGGCTTCCTCATCCCCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTTGTCCCAGGCCACTTGTGGTCTGTCTCTaGCCAATGGCTTGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LCRHRDGSLSEVQACPRPLVVCL*PMACQD
Trigger: GTCCTGGCAAGCCATTGGGCAGAGACAGACCACAAG...TGGCCTGGGACAAGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp ATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGCTGTGCATGCTTGTGTaGATATGTATGCCCAGCGTA +
Preference number: 4 (lower is better)
Translates to: MGGWETSWTLRSMDGPWVLCMLV*ICMPSV
Trigger: TACGCTGGGCATACATATGCACACAAGCATGCACAG...CACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTTGTCCCAGGCCAGCCCAGTGGAAGGTCTaGATACACTACCCCTGCATC +
Preference number: 4 (lower is better)
Translates to: LCRHRDGSLSEVQACPRPAQWKV*IHYPCI
Trigger: GATGCAGGGGTAGTGTATGCAGACCTTCCACTGGGC...TGGCCTGGGACAAGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CATGGGGTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGGCCCAGTGGAAGGTCTaGATACACTACCCCTGCATC +
Preference number: 4 (lower is better)
Translates to: HGVEVDLEGGASVDNLILAQWKV*IHYPCI
Trigger: GATGCAGGGGTAGTGTATGCAGACCTTCCACTGGGC...CAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTACCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGGTGCACAGCCACCTCCTTaGATAAAGGGAGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: QPQILIRAQDREPFSEAGAQPPP*IKGAPC
Trigger: GCAGGGGGCTCCCTTTATCCAAGGAGGTGGCTGTGC...ACCTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGCACAGCCACCTCCTTaGATAAAGGGAGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: FRVGLDNQGVGSSVGTVMAQPPP*IKGAPC
Trigger: GCAGGGGGCTCCCTTTATCCAAGGAGGTGGCTGTGC...CATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCAGTGGTCTCGGAGGCTaGCCCATCTGTGGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: GKIFRVGLDNQGVGSSVGSGLGG*PICGRF
Trigger: GAACCTGCCACAGATGGGCCAGCCTCCGAGACCACT...GCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CTGGGCTTCTCAGGGCCCATAACAGATGCTGCCCTACCCTGTCCCTATAACTTGATGGGCATGAGCTGGTaGCGTAGCTTCTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LGFSGPITDAALPCPYNLMGMSW*RSFSSL
Trigger: GAGGCTGGAGAAGCTACGCCACCAGCTCATGCCCAT...CAAGTTATAGGGACAGGGTAGGGCAGCATCTGTTATGGGCCCTGAGAAGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTGGCATCTTGTTCCTCCGTaGGGTCGAAGTTGTACATGG +
Preference number: 4 (lower is better)
Translates to: STWRVGPVWTISFCPLCWHLVPP*GRSCTW
Trigger: CCATGTACAACTTCGACCCCACGGAGGAACAAGATG...CCAGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGCAGGCCACTCACGCATaGATGGCATTGGCCACATCG +
Preference number: 4 (lower is better)
Translates to: DNQGVGSSVGTVMGLYQKQATHA*MALATS
Trigger: CGATGTGGCCAATGCCATCCATGCGTGAGTGGCCTG...CTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CCCAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGGTCAGCAGGTGGGTCTaGAGAACAGCTAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: PNPRSSLEPKTGSRFQKQVSRWV*RTARTW
Trigger: CCAGGTCCTAGCTGTTCTCCAGACCCACCTGCTGAC...CTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGTCAGGAGAAGTCAGTGGTCAGAAGTCCAGCCTGGCTAGGGCCCTCTCTTAGAGTCAGAAGTCCAGCCTaGCTAGGGCCCTCTCTTAGA +
Preference number: 4 (lower is better)
Translates to: GQEKSVVRSPAWLGPSLRVRSPA*LGPSLR
Trigger: TCTAAGAGAGGGCCCTAGCCAGGCTGGACTTCTGAC...TCTAAGAGAGGGCCCTAGCCAGGCTGGACTTCTGACCACTGACTTCTCCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTCCTGTCCCTATAACTTaGGTGGTTTCCTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: VEVDLEGGASVDNLILPAPVPIT*VVSSPH
Trigger: GTGGGGAGAGGAAACCACCCAAGTTATAGGGACAGG...AGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp ATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGGGCATCCTTGCATACTaGACAGTTTCAGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: MGGWETSWTLRSMDGPWVGILAY*TVSAPS
Trigger: AGATGGAGCTGAAACTGTCCAGTATGCAAGGATGCC...CACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGACAGGGGATGAGGAAGCCAGCAGAGGCTCTTGACCTTCTCAGCATGAGGGATGGACCCTCCGTAGTATaGATGGACCCTGGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: GQGMRKPAEALDLLSMRDGPSVV*MDPGCE
Trigger: TTCACACCCAGGGTCCATCCATACTACGGAGGGTCC...ATCCCTCATGCTGAGAAGGTCAAGAGCCTCTGCTGGCTTCCTCATCCCCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGGGCTGGGAGACCTCCTaGACCCTCCGTAGTATGGAT +
Preference number: 4 (lower is better)
Translates to: DNQGVGSSVGTVMGLYQKGWETS*TLRSMD
Trigger: ATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCC...CTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATGGCTGGGAGACCTCCTaGACCCTCCGTAGTATGGAT +
Preference number: 4 (lower is better)
Translates to: GLDNQGVGSSVGTVMGLYGWETS*TLRSMD
Trigger: ATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCC...ATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCGTTGCCAAGGATGGGTaGCTGGGAGACCTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: GKIFRVGLDNQGVGSSVGVAKDG*LGDLLD
Trigger: GTCCAGGAGGTCTCCCAGCCACCCATCCTTGGCAAC...GCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATGGCCCCAGTAACATCTaGTTGCCAAGGATGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GLDNQGVGSSVGTVMGLYGPSNI*LPRMGG
Trigger: GCCACCCATCCTTGGCAACCAGATGTTACTGGGGCC...ATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CCAGTGAAACAATGCAGTGGAGAGAGGAACCGTGCTGTGCGTGCTTCCCTCTTCAGGGTGGGGCCAGTGTaGACAATCTCATTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: PVKQCSGERNRAVRASLFRVGPV*TISFCP
Trigger: CGGGCAGAATGAGATTGTCCACACTGGCCCCACCCT...GAAGAGGGAAGCACGCACAGCACGGTTCCTCTCTCCACTGCATTGTTTCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CCCAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGAGGGTGGGGCCAGTGTaGACAATCTCATTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: PNPRSSLEPKTGSRFQKQRVGPV*TISFCP
Trigger: CGGGCAGAATGAGATTGTCCACACTGGCCCCACCCT...CTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTGGCTCCACTACATACCATaGGGTAGAGGTCGACTTGGA +
Preference number: 4 (lower is better)
Translates to: STWRVGPVWTISFCPLCWLHYIP*GRGRLG
Trigger: TCCAAGTCGACCTCTACCCCATGGTATGTAGTGGAG...CCAGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TGTGGACAATCTCATTCTGCCCGCTGTGCTGGGACAGGCACATGTCTGCCCATGACCCTCCAAGGCTTATaGAGAGGCCAAGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: CGQSHSARCAGTGTCLPMTLQGL*RGQVQG
Trigger: TCCCTGCACTTGGCCTCTCCATAAGCCTTGGAGGGT...CATGGGCAGACATGTGCCTGTCCCAGCACAGCGGGCAGAATGAGATTGTCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTAATGCCCTGCTCTTGTaGTCTGTCTCTGCCCAATGG +
Preference number: 4 (lower is better)
Translates to: GSGELCRHRDGSLSEVQANALLL*SVSAQW
Trigger: CCATTGGGCAGAGACAGACCACAAGAGCAGGGCATT...AGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTAATGCCCTGCTCTTGTaGTCTGTCTCTGCCCAATGG +
Preference number: 4 (lower is better)
Translates to: VEVDLEGGASVDNLILPANALLL*SVSAQW
Trigger: CCATTGGGCAGAGACAGACCACAAGAGCAGGGCATT...AGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCCAGAACCTTCCCCATaGGGGCTTCCTAGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: GLDNQGVGSSVGTVMGLYPEPSP*GLPRPF
Trigger: GAAAGGCCTAGGAAGCCCCCATGGGGAAGGTTCTGG...ATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp ATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGAGCCCCCTGCCTTCCTaGGTGTTAATCCTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: IFRVGLDNQGVGSSVGTVSPLPS*VLILSR
Trigger: CCGGGAGAGGATTAACACCCAGGAAGGCAGGGGGCT...CACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426034.5
ENST00000430746.5
CDS-3UTR CCA 90 bp CCAGGCCACTCACGCATGGATGGCATTGGCCACATCGGTAAACACCAGCCGGCTGATGTACAAAACCTGTaGCTCCCCAGGGCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: PGHSRMDGIGHIGKHQPADVQNL*LPRAEE
Trigger: TTCTTCAGCCCTGGGGAGCCACAGGTTTTGTACATC...AGCCGGCTGGTGTTTACCGATGTGGCCAATGCCATCCATGCGTGAGTGGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430746.5
3UTR CAA 72 bp GGGCTTCCTAGGCCTTTCCCTCCTGACACATGGCATTaGCCCAGTGGAAGGTCTGCATACACTACCCCTGCA +
Preference number: 4 (lower is better)
Translates to: GLPRPFPPDTWH*PSGRSAYTTPA
Trigger: TGCAGGGGTAGTGTATGCAGACCTTCCACTGGGCAAATGCCATGTGTCAGGAGGGAAAGGCCTAGGAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR TCA 90 bp GTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCGATGGACCCTGGGTGTaGATTGCCCTTCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VLAGKIFRVGLDNQGVGSDGPWV*IALLLA
Trigger: TGCCAGGAGAAGGGCAATTCACACCCAGGGTCCATC...GCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp GTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCACTCATGCACATGCATaGGGCCTCTCGGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: VLAGKIFRVGLDNQGVGSTHAHA*GLSAGL
Trigger: CAGACCTGCCGAGAGGCCTCATGCATGTGCATGAGT...GCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp GGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACTCATGCACATGCATaGGGCCTCTCGGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GKIFRVGLDNQGVGSSVGTHAHA*GLSAGL
Trigger: CAGACCTGCCGAGAGGCCTCATGCATGTGCATGAGT...GCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp GGACAGGGGATGAGGAAGCCAGCAGAGGCTCTTGACCTTCTCAGCATGAGGGATCTTCCCTGCAGTCCCTaGAGATTGAAGGCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: GQGMRKPAEALDLLSMRDLPCSP*RLKAEK
Trigger: CTTCTCTGCCTTCAATCTTCAGGGACTGCAGGGAAG...ATCCCTCATGCTGAGAAGGTCAAGAGCCTCTGCTGGCTTCCTCATCCCCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR TCA 90 bp TCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTGGCCACTCTCTAAACACTaGACGGCTCTTCCCATAGAT +
Preference number: 4 (lower is better)
Translates to: STWRVGPVWTISFCPLCWPLSKH*TALPID
Trigger: ATCTATGGGAAGAGCCGTTCAGTGTTTAGAGAGTGG...CCAGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR TCA 90 bp GACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGCAGCTGTATGCATCCTaGATTCCTGGCAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: DNQGVGSSVGTVMGLYQKQLYAS*IPGSLQ
Trigger: CTGGAGGCTGCCAGGAATTCAGGATGCATACAGCTG...CTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGATGTGAGGGATCTGGACATAAAGGGAGCCCCCTaGCTTCCTGGGTGTTTACGT +
Preference number: 4 (lower is better)
Translates to: LPHFLHISGADPDVRDLDIKGAP*LPGCLR
Trigger: ACGTAAACACCCAGGAAGGCAGGGGGCTCCCTTTAT...GTCCAGATCCCTCACATCAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357203.8
CDS-3UTR GCA 90 bp TTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGCCAGCCCCTAGCAGATaGGGTCCTGGAGTTCATGCT +
Preference number: 4 (lower is better)
Translates to: FRVGLDNQGVGSSVGTVMPAPSR*GPGVHA
Trigger: AGCATGAACTCCAGGACCGCATCTGCTAGGGGCTGG...CATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS-3UTR GCA 90 bp TCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGAGAGTAGTCTTGCCCTaGATGGCCTGCACAGAAGTA +
Preference number: 4 (lower is better)
Translates to: SLPLRISLISSTLAGQTLRVVLP*MACTEV
Trigger: TACTTCTGTGCAGGCCATGCAGGGCAAGACTACTCT...CAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CTGCTCTTGTGGTCTGTCTCTGCCCAATGGCTTGCCAGGACCCCTGGTATCAGCAGAGTAGTCTTGCCCTaGATGGCCTGCACAGAAGTA +
Preference number: 4 (lower is better)
Translates to: LLLWSVSAQWLARTPGISRVVLP*MACTEV
Trigger: TACTTCTGTGCAGGCCATGCAGGGCAAGACTACTCT...GCTGATACCAGGGGTCCTGGCAAGCCATTGGGCAGAGACAGACCACAAGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGAGGGCCCATAACAGATaGTGCCCTACCCTGTCCCTA +
Preference number: 4 (lower is better)
Translates to: DNQGVGSSVGTVMGLYQKRAHNR*CPTLSL
Trigger: TAGGGACAGGGTAGGGCAGCATCTGTTATGGGCCCT...CTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGTCAGGAGAAGTCAGTGGTCAGAAGTCCAGCCTGGCTAGGGCCCTCTCTTAGAACCCTGGGTGTGAATTaGCCTTCTCCTGGCATCCTT +
Preference number: 4 (lower is better)
Translates to: GQEKSVVRSPAWLGPSLRTLGVN*PSPGIL
Trigger: AAGGATGCCAGGAGAAGGGCAATTCACACCCAGGGT...TCTAAGAGAGGGCCCTAGCCAGGCTGGACTTCTGACCACTGACTTCTCCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCGCACACTCATGCACATaGATGAGGCCTCTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: GKIFRVGLDNQGVGSSVGAHSCT*MRPLGR
Trigger: CCTGCCGAGAGGCCTCATGCATGTGCATGAGTGTGC...GCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CTGGGCTTCTCAGGGCCCATAACAGATGCTGCCCTACCCTGTCCCTATAACTTGTCATTCTGCCCGCTGTaGTGGGACAGGCACATGTCT +
Preference number: 4 (lower is better)
Translates to: LGFSGPITDAALPCPYNLSFCPL*WDRHMS
Trigger: AGACATGTGCCTGTCCCAGCACAGCGGGCAGAATGA...CAAGTTATAGGGACAGGGTAGGGCAGCATCTGTTATGGGCCCTGAGAAGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGGTTATGGAGAGGCCAAGTaGAGGGACCCATCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: QPQILIRAQDREPFSEAGYGEAK*RDPSPH
Trigger: GTGGGGAGATGGGTCCCTGCACTTGGCCTCTCCATA...ACCTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCTTGTGGTCTGTCTCTaGCCAATGGCTTGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: GLDNQGVGSSVGTVMGLYLVVCL*PMACQD
Trigger: GTCCTGGCAAGCCATTGGGCAGAGACAGACCACAAG...ATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp TCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGCGGGACATGCCTCTGTaGATGCTTGTGTGCATATGT +
Preference number: 4 (lower is better)
Translates to: SLPLRISLISSTLAGQTLRDMPL*MLVCIC
Trigger: ACATATGCACACAAGCATGCACAGAGGCATGTCCCG...CAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGGTGCTGGGCACGGGACATaGCTCTGTGCATGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: QPQILIRAQDREPFSEAGAGHGT*LCACLC
Trigger: ACACAAGCATGCACAGAGGCATGTCCCGTGCCCAGC...ACCTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTGCATACACTACCCCTaGATCCCCTCCAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: VLAGKIFRVGLDNQGVGSCIHYP*IPSSQQ
Trigger: CTGCTGGCTGGAGGGGATGCAGGGGTAGTGTATGCA...GCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGGTTGCATACACTACCCCTaGATCCCCTCCAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: QPQILIRAQDREPFSEAGCIHYP*IPSSQQ
Trigger: CTGCTGGCTGGAGGGGATGCAGGGGTAGTGTATGCA...ACCTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp ATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGCATGAGCTGGTaGCGTAGCTTCTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: IFRVGLDNQGVGSSVGTVMGMSW*RSFSSL
Trigger: GAGGCTGGAGAAGCTACGCCACCAGCTCATGCCCAT...CACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGATGGGCATGAGCTGGTaGCGTAGCTTCTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: FRVGLDNQGVGSSVGTVMMGMSW*RSFSSL
Trigger: GAGGCTGGAGAAGCTACGCCACCAGCTCATGCCCAT...CATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCATGGGCATGAGCTGGTaGCGTAGCTTCTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: VLAGKIFRVGLDNQGVGSMGMSW*RSFSSL
Trigger: GAGGCTGGAGAAGCTACGCCACCAGCTCATGCCCAT...GCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGGTATGGGCATGAGCTGGTaGCGTAGCTTCTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QPQILIRAQDREPFSEAGMGMSW*RSFSSL
Trigger: GAGGCTGGAGAAGCTACGCCACCAGCTCATGCCCAT...ACCTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTACATGGGCATGAGCTaGTGGCGTAGCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: DNQGVGSSVGTVMGLYQKYMGMS*WRSFSS
Trigger: GCTGGAGAAGCTACGCCACCAGCTCATGCCCATGTA...CTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATTACATGGGCATGAGCTaGTGGCGTAGCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLDNQGVGSSVGTVMGLYYMGMS*WRSFSS
Trigger: GCTGGAGAAGCTACGCCACCAGCTCATGCCCATGTA...ATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTCATCTTGTTCCTCCGTaGGGTCGAAGTTGTACATGG +
Preference number: 4 (lower is better)
Translates to: VEVDLEGGASVDNLILPAHLVPP*GRSCTW
Trigger: CCATGTACAACTTCGACCCCACGGAGGAACAAGATG...AGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CACTCACGCATGGATGGCATTGGCCACATCGGTAAACACCAGCCGGCTGGGTCTCATCTTGTTCCTCCGTaGGGTCGAAGTTGTACATGG +
Preference number: 4 (lower is better)
Translates to: HSRMDGIGHIGKHQPAGSHLVPP*GRSCTW
Trigger: CCATGTACAACTTCGACCCCACGGAGGAACAAGATG...AGACCCAGCCGGCTGGTGTTTACCGATGTGGCCAATGCCATCCATGCGTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430746.5
CDS-3UTR CCA 90 bp TGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGCTCTGCAGTGGGCCCTaGGAGGGCAGAGTAGTCTTG +
Preference number: 4 (lower is better)
Translates to: CVLAGKIFRVGLDNQGVGLCSGP*EGRVVL
Trigger: CAAGACTACTCTGCCCTCCCAGGGCCCACTGCAGAG...CCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTACTCTGCAGTGGGCCCTaGGAGGGCAGAGTAGTCTTG +
Preference number: 4 (lower is better)
Translates to: AGKIFRVGLDNQGVGSSVLCSGP*EGRVVL
Trigger: CAAGACTACTCTGCCCTCCCAGGGCCCACTGCAGAG...TACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGCAGGCCACTCACGCATaGATGGCATTGGCCACATCG +
Preference number: 4 (lower is better)
Translates to: FRVGLDNQGVGSSVGTVMQATHA*MALATS
Trigger: CGATGTGGCCAATGCCATCCATGCGTGAGTGGCCTG...CATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTAGCCCTCTTGTGTCTTaGCAGGGAAGATCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: GSGELCRHRDGSLSEVQASPLVS*QGRSSE
Trigger: CTCTGAAGATCTTCCCTGCCAAGACACAAGAGGGCT...AGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCGTCAGCAGGTGGGTCTaGAGAACAGCTAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: GKIFRVGLDNQGVGSSVGVSRWV*RTARTW
Trigger: CCAGGTCCTAGCTGTTCTCCAGACCCACCTGCTGAC...GCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CCCAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGGTCAGAAGTCCAGCCTaGCTAGGGCCCTCTCTTAGA +
Preference number: 4 (lower is better)
Translates to: PNPRSSLEPKTGSRFQKQVRSPA*LGPSLR
Trigger: TCTAAGAGAGGGCCCTAGCCAGGCTGGACTTCTGAC...CTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGGTCAGAAGTCCAGCCTaGCTAGGGCCCTCTCTTAGA +
Preference number: 4 (lower is better)
Translates to: DNQGVGSSVGTVMGLYQKVRSPA*LGPSLR
Trigger: TCTAAGAGAGGGCCCTAGCCAGGCTGGACTTCTGAC...CTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CCTGACCCTCCAAGGCTTATGGAGAGGCCAAGTGCAGGGACCCATCTCCCCACTGGCATCCTTGCATACTaGACAGTTTCAGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: PDPPRLMERPSAGTHLPTGILAY*TVSAPS
Trigger: AGATGGAGCTGAAACTGTCCAGTATGCAAGGATGCC...AGTGGGGAGATGGGTCCCTGCACTTGGCCTCTCCATAAGCCTTGGAGGGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTGAATTGCCCTTCTCCTaGCATCCTTGCATACTGGAC +
Preference number: 4 (lower is better)
Translates to: GSGELCRHRDGSLSEVQAELPFS*HPCILD
Trigger: GTCCAGTATGCAAGGATGCCAGGAGAAGGGCAATTC...AGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGGAATTGCCCTTCTCCTaGCATCCTTGCATACTGGAC +
Preference number: 4 (lower is better)
Translates to: SLPLRISLISSTLAGQTLELPFS*HPCILD
Trigger: GTCCAGTATGCAAGGATGCCAGGAGAAGGGCAATTC...CAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CCAGTGAAACAATGCAGTGGAGAGAGGAACCGTGCTGTGCGTGCTTCCCTCTTCGGACCCTCCGTAGTATaGATGGACCCTGGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: PVKQCSGERNRAVRASLFGPSVV*MDPGCE
Trigger: TTCACACCCAGGGTCCATCCATACTACGGAGGGTCC...GAAGAGGGAAGCACGCACAGCACGGTTCCTCTCTCCACTGCATTGTTTCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp ATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGGGCTGGGAGACCTCCTaGACCCTCCGTAGTATGGAT +
Preference number: 4 (lower is better)
Translates to: IFRVGLDNQGVGSSVGTVGWETS*TLRSMD
Trigger: ATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCC...CACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGTTCTGCCCGCTGTGCTaGGACAGGCACATGTCTGCC +
Preference number: 4 (lower is better)
Translates to: CVLAGKIFRVGLDNQGVGFCPLC*DRHMSA
Trigger: GGCAGACATGTGCCTGTCCCAGCACAGCGGGCAGAA...CCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp ATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGGCTCTTCCCATAGATaGGATGGAGGTGGGGAATTC +
Preference number: 4 (lower is better)
Translates to: IPPTPYLPHFLHISGADPGSSHR*DGGGEF
Trigger: GAATTCCCCACCTCCATCCCATCTATGGGAAGAGCC...AGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GCTGCCCTACCCTGTCCCTATAACTTGGGTGGTTTCCTCTCCCCACCCCAGAGGATGGCATTTGCCCAGTaGAAGGTCTGCATACACTAC +
Preference number: 4 (lower is better)
Translates to: AALPCPYNLGGFLSPPQRMAFAQ*KVCIHY
Trigger: GTAGTGTATGCAGACCTTCCACTGGGCAAATGCCAT...CCTCTGGGGTGGGGAGAGGAAACCACCCAAGTTATAGGGACAGGGTAGGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGATGTGAGGGATCTGGACTTCCCTCCTGACACATaGCATTTGCCCAGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LPHFLHISGADPDVRDLDFPPDT*HLPSGR
Trigger: CCTTCCACTGGGCAAATGCCATGTGTCAGGAGGGAA...GTCCAGATCCCTCACATCAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGCCAGAACCTTCCCCATaGGGGCTTCCTAGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: FRVGLDNQGVGSSVGTVMPEPSP*GLPRPF
Trigger: GAAAGGCCTAGGAAGCCCCCATGGGGAAGGTTCTGG...CATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CATGGGGTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGTGCATCCTGAATTCCTaGCAGCCTCCAGTCGACTCA +
Preference number: 4 (lower is better)
Translates to: HGVEVDLEGGASVDNLILCILNS*QPPVDS
Trigger: TGAGTCGACTGGAGGCTGCCAGGAATTCAGGATGCA...CAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTACCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR TCA 90 bp CTGGGCTTCTCAGGGCCCATAACAGATGCTGCCCTACCCTGTCCCTATAACTTGAGTTGTACATGGGCATaGGCTGGTGGCGTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LGFSGPITDAALPCPYNLSCTWA*AGGVAS
Trigger: AGAAGCTACGCCACCAGCTCATGCCCATGTACAACT...CAAGTTATAGGGACAGGGTAGGGCAGCATCTGTTATGGGCCCTGAGAAGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp CTGGGCTTCTCAGGGCCCATAACAGATGCTGCCCTACCCTGTCCCTATAACTTGCTTCAGAGTAGGTCTTaGCAATCAGGGAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LGFSGPITDAALPCPYNLLQSRS*QSGSGE
Trigger: CTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAG...CAAGTTATAGGGACAGGGTAGGGCAGCATCTGTTATGGGCCCTGAGAAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp CTGGGCTTCTCAGGGCCCATAACAGATGCTGCCCTACCCTGTCCCTATAACTTGCTTCCCTGCAGTCCCTaGAGATTGAAGGCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: LGFSGPITDAALPCPYNLLPCSP*RLKAEK
Trigger: CTTCTCTGCCTTCAATCTTCAGGGACTGCAGGGAAG...CAAGTTATAGGGACAGGGTAGGGCAGCATCTGTTATGGGCCCTGAGAAGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR TCA 90 bp TTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGCTAGCCTGCAGCCTGTaGTTACTGCCCTCAGACCAA +
Preference number: 4 (lower is better)
Translates to: FRVGLDNQGVGSSVGTVMLACSL*LLPSDQ
Trigger: TTGGTCTGAGGGCAGTAATCACAGGCTGCAGGCTAG...CATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR TCA 90 bp GGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTCCACTCTCTAAACACTaGACGGCTCTTCCCATAGAT +
Preference number: 4 (lower is better)
Translates to: GSGELCRHRDGSLSEVQAPLSKH*TALPID
Trigger: ATCTATGGGAAGAGCCGTTCAGTGTTTAGAGAGTGG...AGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CCCTCTTGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGACCTGTGGTGGCCACCTaGACAGCCACCTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: PSCVLAGKIFRVGLDNQGPVVAT*TATSLD
Trigger: ATCCAAGGAGGTGGCTGTGCAGGTGGCCACCACAGG...TCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACAAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CCCTCTTGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGACCCTGGCTGAGAGGCTaGCTGATGCCAGTCAACCTG +
Preference number: 4 (lower is better)
Translates to: PSCVLAGKIFRVGLDNQGPWLRG*LMPVNL
Trigger: CAGGTTGACTGGCATCAGGCAGCCTCTCAGCCAGGG...TCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACAAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS-3UTR GCA 90 bp ATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGTTGCCCTGCATGGCCTaGACAGAAGTAGCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: IFRVGLDNQGVGSSVGTVLPCMA*TEVAAC
Trigger: ACAGGCTGCTACTTCTGTGCAGGCCATGCAGGGCAA...CACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTTGTCCCAGGCCAAGAGTAGTCTTGCCCTaGATGGCCTGCACAGAAGTA +
Preference number: 4 (lower is better)
Translates to: LCRHRDGSLSEVQACPRPRVVLP*MACTEV
Trigger: TACTTCTGTGCAGGCCATGCAGGGCAAGACTACTCT...TGGCCTGGGACAAGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCAGGGCCCATAACAGATaGTGCCCTACCCTGTCCCTA +
Preference number: 4 (lower is better)
Translates to: GKIFRVGLDNQGVGSSVGRAHNR*CPTLSL
Trigger: TAGGGACAGGGTAGGGCAGCATCTGTTATGGGCCCT...GCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp TCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGTTCTCCTGGCATCCTTaGATACTGGACAGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: SLPLRISLISSTLAGQTLFSWHP*ILDSFS
Trigger: GCTGAAACTGTCCAGTATGCAAGGATGCCAGGAGAA...CAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTTTCTCCTGGCATCCTTaGATACTGGACAGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: VEVDLEGGASVDNLILPAFSWHP*ILDSFS
Trigger: GCTGAAACTGTCCAGTATGCAAGGATGCCAGGAGAA...AGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp TGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGAGGAACCGTGCTGTaGGTGCTTCCCTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: CVLAGKIFRVGLDNQGVGRGTVL*VLPSSL
Trigger: CAGGGAAGAGGGAAGCACGCACAGCACGGTTCCTCT...CCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CAATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCAGCCCAGTGAAACAATaGAGTGGAGAGAGGAACCGT +
Preference number: 4 (lower is better)
Translates to: QSLPLRISLISSTLAGQTSPVKQ*SGERNR
Trigger: ACGGTTCCTCTCTCCACTGCATTGTTTCACTGGGCT...GGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTATATGGAGAGGCCAAGTaGAGGGACCCATCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: AGKIFRVGLDNQGVGSSVYGEAK*RDPSPH
Trigger: GTGGGGAGATGGGTCCCTGCACTTGGCCTCTCCATA...TACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGTCAGGAGAAGTCAGTGGTCAGAAGTCCAGCCTGGCTAGGGCCCTCTCTTAGACGGGACATGCCTCTGTaGATGCTTGTGTGCATATGT +
Preference number: 4 (lower is better)
Translates to: GQEKSVVRSPAWLGPSLRRDMPL*MLVCIC
Trigger: ACATATGCACACAAGCATGCACAGAGGCATGTCCCG...TCTAAGAGAGGGCCCTAGCCAGGCTGGACTTCTGACCACTGACTTCTCCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp ATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGCTCTCACGTGGAGCTaGTCTGGGTTAAATTACAGC +
Preference number: 4 (lower is better)
Translates to: IPPTPYLPHFLHISGADPALTWS*SGLNYS
Trigger: GCTGTAATTTAACCCAGAGCAGCTCCACGTGAGAGC...AGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGGCTGGCCCATCTGTaGCAGGTTCCAGGTCAGACT +
Preference number: 4 (lower is better)
Translates to: CVLAGKIFRVGLDNQGVGRLAHL*QVPGQT
Trigger: AGTCTGACCTGGAACCTGCCACAGATGGGCCAGCCT...CCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGTACATGGGCATGAGCTaGTGGCGTAGCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FRVGLDNQGVGSSVGTVMYMGMS*WRSFSS
Trigger: GCTGGAGAAGCTACGCCACCAGCTCATGCCCATGTA...CATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGCAGGCCACTCACGCATaGATGGCATTGGCCACATCG +
Preference number: 4 (lower is better)
Translates to: CVLAGKIFRVGLDNQGVGQATHA*MALATS
Trigger: CGATGTGGCCAATGCCATCCATGCGTGAGTGGCCTG...CCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGGCTTCCTAGGCCTTTCCCTCCTGACACATGGCATTTGCCCAGTGGAAGGTCTAGCCCTCTTGTGTCTTaGCAGGGAAGATCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: GLPRPFPPDTWHLPSGRSSPLVS*QGRSSE
Trigger: CTCTGAAGATCTTCCCTGCCAAGACACAAGAGGGCT...AGACCTTCCACTGGGCAAATGCCATGTGTCAGGAGGGAAAGGCCTAGGAAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGGTGTCAGAAGTCCAGCCTaGCTAGGGCCCTCTCTTAGA +
Preference number: 4 (lower is better)
Translates to: QPQILIRAQDREPFSEAGVRSPA*LGPSLR
Trigger: TCTAAGAGAGGGCCCTAGCCAGGCTGGACTTCTGAC...ACCTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCGTCAGAAGTCCAGCCTaGCTAGGGCCCTCTCTTAGA +
Preference number: 4 (lower is better)
Translates to: VLAGKIFRVGLDNQGVGSVRSPA*LGPSLR
Trigger: TCTAAGAGAGGGCCCTAGCCAGGCTGGACTTCTGAC...GCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGCCTGTCCCTATAACTTaGGTGGTTTCCTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: DNQGVGSSVGTVMGLYQKPVPIT*VVSSPH
Trigger: GTGGGGAGAGGAAACCACCCAAGTTATAGGGACAGG...CTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGACAGGGGATGAGGAAGCCAGCAGAGGCTCTTGACCTTCTCAGCATGAGGGATGAATTGCCCTTCTCCTaGCATCCTTGCATACTGGAC +
Preference number: 4 (lower is better)
Translates to: GQGMRKPAEALDLLSMRDELPFS*HPCILD
Trigger: GTCCAGTATGCAAGGATGCCAGGAGAAGGGCAATTC...ATCCCTCATGCTGAGAAGGTCAAGAGCCTCTGCTGGCTTCCTCATCCCCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TGTGGACAATCTCATTCTGCCCGCTGTGCTGGGACAGGCACATGTCTGCCCATGGAATTGCCCTTCTCCTaGCATCCTTGCATACTGGAC +
Preference number: 4 (lower is better)
Translates to: CGQSHSARCAGTGTCLPMELPFS*HPCILD
Trigger: GTCCAGTATGCAAGGATGCCAGGAGAAGGGCAATTC...CATGGGCAGACATGTGCCTGTCCCAGCACAGCGGGCAGAATGAGATTGTCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GTGAATTGCCCTTCTCCTGGCATCCTTGCATACTGGACAGTTTCAGCTCCATCTGTTGCCAAGGATGGGTaGCTGGGAGACCTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: VNCPSPGILAYWTVSAPSVAKDG*LGDLLD
Trigger: GTCCAGGAGGTCTCCCAGCCACCCATCCTTGGCAAC...AGATGGAGCTGAAACTGTCCAGTATGCAAGGATGCCAGGAGAAGGGCAATTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCACCCTCCAAGGCTTATaGAGAGGCCAAGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: VLAGKIFRVGLDNQGVGSTLQGL*RGQVQG
Trigger: TCCCTGCACTTGGCCTCTCCATAAGCCTTGGAGGGT...GCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATAATGCCCTGCTCTTGTaGTCTGTCTCTGCCCAATGG +
Preference number: 4 (lower is better)
Translates to: GLDNQGVGSSVGTVMGLYNALLL*SVSAQW
Trigger: CCATTGGGCAGAGACAGACCACAAGAGCAGGGCATT...ATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CTGCTCTTGTGGTCTGTCTCTGCCCAATGGCTTGCCAGGACCCCTGGTATCAGCATGGCATTTGCCCAGTaGAAGGTCTGCATACACTAC +
Preference number: 4 (lower is better)
Translates to: LLLWSVSAQWLARTPGISMAFAQ*KVCIHY
Trigger: GTAGTGTATGCAGACCTTCCACTGGGCAAATGCCAT...GCTGATACCAGGGGTCCTGGCAAGCCATTGGGCAGAGACAGACCACAAGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTATGGCATTTGCCCAGTaGAAGGTCTGCATACACTAC +
Preference number: 4 (lower is better)
Translates to: VEVDLEGGASVDNLILPAMAFAQ*KVCIHY
Trigger: GTAGTGTATGCAGACCTTCCACTGGGCAAATGCCAT...AGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTGCATCCTGAATTCCTaGCAGCCTCCAGTCGACTCA +
Preference number: 4 (lower is better)
Translates to: DNQGVGSSVGTVMGLYQKCILNS*QPPVDS
Trigger: TGAGTCGACTGGAGGCTGCCAGGAATTCAGGATGCA...CTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GCTGCCCTACCCTGTCCCTATAACTTGGGTGGTTTCCTCTCCCCACCCCAGAGGCACGTGGAGCTGCTCTaGGTTAAATTACAGCTGTAT +
Preference number: 4 (lower is better)
Translates to: AALPCPYNLGGFLSPPQRHVELL*VKLQLY
Trigger: ATACAGCTGTAATTTAACCCAGAGCAGCTCCACGTG...CCTCTGGGGTGGGGAGAGGAAACCACCCAAGTTATAGGGACAGGGTAGGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGAGCAGCCCTTCTGGATaGGGACATGCTGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: FRVGLDNQGVGSSVGTVMSSPSG*GHAEAD
Trigger: ATCAGCCTCAGCATGTCCCCATCCAGAAGGGCTGCT...CATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422619.1
CDS-3UTR TCA 90 bp CTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTTGTCCCAGGCCAGCCTCTTCTTCTTCCTaGTGTACAAAACCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: LCRHRDGSLSEVQACPRPASSSS*CTKPRP
Trigger: TGGCCTTGGTTTTGTACATCAGGAAGAAGAAGAGGC...TGGCCTGGGACAAGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR TCA 90 bp GGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCAGTTGTACATGGGCATaGGCTGGTGGCGTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GKIFRVGLDNQGVGSSVGSCTWA*AGGVAS
Trigger: AGAAGCTACGCCACCAGCTCATGCCCATGTACAACT...GCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp TTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGCTTCAGAGTAGGTCTTaGCAATCAGGGAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: FRVGLDNQGVGSSVGTVMLQSRS*QSGSGE
Trigger: CTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAG...CATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp GCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTATTGACCTTCTCAGCATaGGGGATGCCCTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: AGKIFRVGLDNQGVGSSVLTFSA*GMPSVP
Trigger: TGGCACAGAGGGCATCCCTCATGCTGAGAAGGTCAA...TACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp CCCTCTTGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGATGGACCCTGGGTGTaGATTGCCCTTCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: PSCVLAGKIFRVGLDNQGDGPWV*IALLLA
Trigger: TGCCAGGAGAAGGGCAATTCACACCCAGGGTCCATC...TCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACAAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp GCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTACTAGCCTGCAGCCTGTaGTTACTGCCCTCAGACCAA +
Preference number: 4 (lower is better)
Translates to: AGKIFRVGLDNQGVGSSVLACSL*LLPSDQ
Trigger: TTGGTCTGAGGGCAGTAATCACAGGCTGCAGGCTAG...TACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR TCA 90 bp TGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGCTAGCCTGCAGCCTGTaGTTACTGCCCTCAGACCAA +
Preference number: 4 (lower is better)
Translates to: CVLAGKIFRVGLDNQGVGLACSL*LLPSDQ
Trigger: TTGGTCTGAGGGCAGTAATCACAGGCTGCAGGCTAG...CCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR TCA 90 bp CTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTTGTCCCAGGCCACCACTCTCTAAACACTaGACGGCTCTTCCCATAGAT +
Preference number: 4 (lower is better)
Translates to: LCRHRDGSLSEVQACPRPPLSKH*TALPID
Trigger: ATCTATGGGAAGAGCCGTTCAGTGTTTAGAGAGTGG...TGGCCTGGGACAAGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGGCTTCCTAGGCCTTTCCCTCCTGACACATGGCATTTGCCCAGTGGAAGGTCTACAAAAATGAAGCCCTaGATCCTCTGTCTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GLPRPFPPDTWHLPSGRSTKMKP*ILCLWV
Trigger: CACCCACAGACAGAGGATGCAGGGCTTCATTTTTGT...AGACCTTCCACTGGGCAAATGCCATGTGTCAGGAGGGAAAGGCCTAGGAAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357203.8
CDS-3UTR GCA 90 bp GACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGAGAGTAGTCTTGCCCTaGATGGCCTGCACAGAAGTA +
Preference number: 4 (lower is better)
Translates to: DNQGVGSSVGTVMGLYQKRVVLP*MACTEV
Trigger: TACTTCTGTGCAGGCCATGCAGGGCAAGACTACTCT...CTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGTCAGGAGAAGTCAGTGGTCAGAAGTCCAGCCTGGCTAGGGCCCTCTCTTAGATTCTCCTGGCATCCTTaGATACTGGACAGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: GQEKSVVRSPAWLGPSLRFSWHP*ILDSFS
Trigger: GCTGAAACTGTCCAGTATGCAAGGATGCCAGGAGAA...TCTAAGAGAGGGCCCTAGCCAGGCTGGACTTCTGACCACTGACTTCTCCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTACCAGTAACATCTGGTTaGCAAGGATGGGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AGKIFRVGLDNQGVGSSVPVTSG*QGWVAG
Trigger: CCCAGCCACCCATCCTTGGCAACCAGATGTTACTGG...TACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CCCTCTTGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGGACAGGCACATGTCTaGCCATGGGCACACTCATGC +
Preference number: 4 (lower is better)
Translates to: PSCVLAGKIFRVGLDNQGGQAHV*PWAHSC
Trigger: GCATGAGTGTGCCCATGGGCAGACATGTGCCTGTCC...TCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACAAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp TGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGTCATTCTGCCCGCTGTaGTGGGACAGGCACATGTCT +
Preference number: 4 (lower is better)
Translates to: CVLAGKIFRVGLDNQGVGSFCPL*WDRHMS
Trigger: AGACATGTGCCTGTCCCAGCACAGCGGGCAGAATGA...CCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GTGAATTGCCCTTCTCCTGGCATCCTTGCATACTGGACAGTTTCAGCTCCATCTCTCTGCCCAATGGCTTaGCAGGACCCCTGGTATCAG +
Preference number: 4 (lower is better)
Translates to: VNCPSPGILAYWTVSAPSLCPMA*QDPWYQ
Trigger: CTGATACCAGGGGTCCTGGCAAGCCATTGGGCAGAG...AGATGGAGCTGAAACTGTCCAGTATGCAAGGATGCCAGGAGAAGGGCAATTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGGCTTCCTAGGCCTTTCCCTCCTGACACATGGCATTTGCCCAGTGGAAGGTCTCTGTGCATGCTTGTGTaGATATGTATGCCCAGCGTA +
Preference number: 4 (lower is better)
Translates to: GLPRPFPPDTWHLPSGRSLCMLV*ICMPSV
Trigger: TACGCTGGGCATACATATGCACACAAGCATGCACAG...AGACCTTCCACTGGGCAAATGCCATGTGTCAGGAGGGAAAGGCCTAGGAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CCCTCTTGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGCTGGGCACGGGACATaGCTCTGTGCATGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: PSCVLAGKIFRVGLDNQGAGHGT*LCACLC
Trigger: ACACAAGCATGCACAGAGGCATGTCCCGTGCCCAGC...TCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACAAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTCTGATGTACAAAACCTaGAAGAGAAGGAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: GSGELCRHRDGSLSEVQALMYKT*KRRSSI
Trigger: GATGCTGCTCCTTCTCTTGCAGGTTTTGTACATCAG...AGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422619.1
CDS-3UTR CCA 90 bp GACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGAGCCCTCTTGTGTCTTaGCAGGGAAGATCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: DNQGVGSSVGTVMGLYQKSPLVS*QGRSSE
Trigger: CTCTGAAGATCTTCCCTGCCAAGACACAAGAGGGCT...CTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATAGCCCTCTTGTGTCTTaGCAGGGAAGATCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: GLDNQGVGSSVGTVMGLYSPLVS*QGRSSE
Trigger: CTCTGAAGATCTTCCCTGCCAAGACACAAGAGGGCT...ATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATTCTAAAGTCAGCAGGTaGGTCTGGAGAACAGCTAGG +
Preference number: 4 (lower is better)
Translates to: GLDNQGVGSSVGTVMGLYSKVSR*VWRTAR
Trigger: CCTAGCTGTTCTCCAGACCCACCTGCTGACTTTAGA...ATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCCCTGTCCCTATAACTTaGGTGGTTTCCTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: VLAGKIFRVGLDNQGVGSPVPIT*VVSSPH
Trigger: GTGGGGAGAGGAAACCACCCAAGTTATAGGGACAGG...GCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GGTCAGGAGAAGTCAGTGGTCAGAAGTCCAGCCTGGCTAGGGCCCTCTCTTAGAGGCATCCTTGCATACTaGACAGTTTCAGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: GQEKSVVRSPAWLGPSLRGILAY*TVSAPS
Trigger: AGATGGAGCTGAAACTGTCCAGTATGCAAGGATGCC...TCTAAGAGAGGGCCCTAGCCAGGCTGGACTTCTGACCACTGACTTCTCCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCGGCTCTTCCCATAGATaGGATGGAGGTGGGGAATTC +
Preference number: 4 (lower is better)
Translates to: VLAGKIFRVGLDNQGVGSGSSHR*DGGGEF
Trigger: GAATTCCCCACCTCCATCCCATCTATGGGAAGAGCC...GCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp ATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGTGCATCCTGAATTCCTaGCAGCCTCCAGTCGACTCA +
Preference number: 4 (lower is better)
Translates to: IFRVGLDNQGVGSSVGTVCILNS*QPPVDS
Trigger: TGAGTCGACTGGAGGCTGCCAGGAATTCAGGATGCA...CACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR TCA 90 bp CCAGTGAAACAATGCAGTGGAGAGAGGAACCGTGCTGTGCGTGCTTCCCTCTTCGCCTCTTCTTCTTCCTaGTGTACAAAACCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: PVKQCSGERNRAVRASLFASSSS*CTKPRP
Trigger: TGGCCTTGGTTTTGTACATCAGGAAGAAGAAGAGGC...GAAGAGGGAAGCACGCACAGCACGGTTCCTCTCTCCACTGCATTGTTTCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR TCA 90 bp CCCAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGGCCTCTTCTTCTTCCTaGTGTACAAAACCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: PNPRSSLEPKTGSRFQKQASSSS*CTKPRP
Trigger: TGGCCTTGGTTTTGTACATCAGGAAGAAGAAGAGGC...CTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR TCA 90 bp TGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGTTGTACATGGGCATaGGCTGGTGGCGTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: CVLAGKIFRVGLDNQGVGSCTWA*AGGVAS
Trigger: AGAAGCTACGCCACCAGCTCATGCCCATGTACAACT...CCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp GCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAAGTTGTACATGGGCATaGGCTGGTGGCGTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: AGKIFRVGLDNQGVGSSVSCTWA*AGGVAS
Trigger: AGAAGCTACGCCACCAGCTCATGCCCATGTACAACT...TACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp TGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGCTTCAGAGTAGGTCTTaGCAATCAGGGAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: CVLAGKIFRVGLDNQGVGLQSRS*QSGSGE
Trigger: CTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAG...CCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp CCCTCTTGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGATTGACCTTCTCAGCATaGGGGATGCCCTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: PSCVLAGKIFRVGLDNQGLTFSA*GMPSVP
Trigger: TGGCACAGAGGGCATCCCTCATGCTGAGAAGGTCAA...TCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACAAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTTTTACGTATCTACGGTaGCCCTGTTTTTGGGAACAA +
Preference number: 4 (lower is better)
Translates to: GSGELCRHRDGSLSEVQAFTYLR*PCFWEQ
Trigger: TTGTTCCCAAAAACAGGGGCACCGTAGATACGTAAA...AGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357203.8
CDS-3UTR GCA 90 bp GTGAATTGCCCTTCTCCTGGCATCCTTGCATACTGGACAGTTTCAGCTCCATCTTTGCCCTGCATGGCCTaGACAGAAGTAGCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: VNCPSPGILAYWTVSAPSLPCMA*TEVAAC
Trigger: ACAGGCTGCTACTTCTGTGCAGGCCATGCAGGGCAA...AGATGGAGCTGAAACTGTCCAGTATGCAAGGATGCCAGGAGAAGGGCAATTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGGTAGAGTAGTCTTGCCCTaGATGGCCTGCACAGAAGTA +
Preference number: 4 (lower is better)
Translates to: QPQILIRAQDREPFSEAGRVVLP*MACTEV
Trigger: TACTTCTGTGCAGGCCATGCAGGGCAAGACTACTCT...ACCTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CTGCTCTTGTGGTCTGTCTCTGCCCAATGGCTTGCCAGGACCCCTGGTATCAGCGATGTTTTTCTGAAGTaGAATCCCTCACCCACTTTC +
Preference number: 4 (lower is better)
Translates to: LLLWSVSAQWLARTPGISDVFLK*NPSPTF
Trigger: GAAAGTGGGTGAGGGATTGCACTTCAGAAAAACATC...GCTGATACCAGGGGTCCTGGCAAGCCATTGGGCAGAGACAGACCACAAGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGGTGCTCTCACGTGGAGCTaGTCTGGGTTAAATTACAGC +
Preference number: 4 (lower is better)
Translates to: QPQILIRAQDREPFSEAGALTWS*SGLNYS
Trigger: GCTGTAATTTAACCCAGAGCAGCTCCACGTGAGAGC...ACCTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GTGAATTGCCCTTCTCCTGGCATCCTTGCATACTGGACAGTTTCAGCTCCATCTTACATGGGCATGAGCTaGTGGCGTAGCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VNCPSPGILAYWTVSAPSYMGMS*WRSFSS
Trigger: GCTGGAGAAGCTACGCCACCAGCTCATGCCCATGTA...AGATGGAGCTGAAACTGTCCAGTATGCAAGGATGCCAGGAGAAGGGCAATTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CCCTCTTGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGATACATGGGCATGAGCTaGTGGCGTAGCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PSCVLAGKIFRVGLDNQGYMGMS*WRSFSS
Trigger: GCTGGAGAAGCTACGCCACCAGCTCATGCCCATGTA...TCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACAAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp ATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGCATCTTGTTCCTCCGTaGGGTCGAAGTTGTACATGG +
Preference number: 4 (lower is better)
Translates to: IFRVGLDNQGVGSSVGTVHLVPP*GRSCTW
Trigger: CCATGTACAACTTCGACCCCACGGAGGAACAAGATG...CACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGCATCTTGTTCCTCCGTaGGGTCGAAGTTGTACATGG +
Preference number: 4 (lower is better)
Translates to: FRVGLDNQGVGSSVGTVMHLVPP*GRSCTW
Trigger: CCATGTACAACTTCGACCCCACGGAGGAACAAGATG...CATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTAAAGTCAGCAGGTaGGTCTGGAGAACAGCTAGG +
Preference number: 4 (lower is better)
Translates to: VLAGKIFRVGLDNQGVGSSKVSR*VWRTAR
Trigger: CCTAGCTGTTCTCCAGACCCACCTGCTGACTTTAGA...GCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR TCA 90 bp CTTCTTCCTGATGTACAAAACCTGTGGCTCCCCAGGGCTGAAGAAGAAAGGGAACTTCAGAGTAGGTCTTaGCAATCAGGGAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LLPDVQNLWLPRAEEERELQSRS*QSGSGE
Trigger: CTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAG...TTCCCTTTCTTCTTCAGCCCTGGGGAGCCACAGGTTTTGTACATCAGGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430746.5
CDS-3UTR GCA 90 bp GCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAAGCCCAGTGAAACAATaGAGTGGAGAGAGGAACCGT +
Preference number: 4 (lower is better)
Translates to: AGKIFRVGLDNQGVGSSVSPVKQ*SGERNR
Trigger: ACGGTTCCTCTCTCCACTGCATTGTTTCACTGGGCT...TACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp CATGGGGTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGGATGTTTTTCTGAAGTaGAATCCCTCACCCACTTTC +
Preference number: 4 (lower is better)
Translates to: HGVEVDLEGGASVDNLILDVFLK*NPSPTF
Trigger: GAAAGTGGGTGAGGGATTGCACTTCAGAAAAACATC...CAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTACCCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR GCA 90 bp GTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCCTGTGCATGCTTGTGTaGATATGTATGCCCAGCGTA +
Preference number: 4 (lower is better)
Translates to: VLAGKIFRVGLDNQGVGSLCMLV*ICMPSV
Trigger: TACGCTGGGCATACATATGCACACAAGCATGCACAG...GCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp TGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGTCTAAAGTCAGCAGGTaGGTCTGGAGAACAGCTAGG +
Preference number: 4 (lower is better)
Translates to: CVLAGKIFRVGLDNQGVGSKVSR*VWRTAR
Trigger: CCTAGCTGTTCTCCAGACCCACCTGCTGACTTTAGA...CCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGCACGTGGAGCTGCTCTaGGTTAAATTACAGCTGTAT +
Preference number: 4 (lower is better)
Translates to: DNQGVGSSVGTVMGLYQKHVELL*VKLQLY
Trigger: ATACAGCTGTAATTTAACCCAGAGCAGCTCCACGTG...CTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CCA 90 bp GCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTACTCTCACTCCCAGGGTaGCAACCAACTATATCTGAG +
Preference number: 4 (lower is better)
Translates to: AGKIFRVGLDNQGVGSSVLSLPG*QPTISE
Trigger: CTCAGATATAGTTGGTTGCCACCCTGGGAGTGAGAG...TACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449241.5
CDS-3UTR TCA 90 bp GCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGCCTCTTCTTCTTCCTaGTGTACAAAACCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: AGKIFRVGLDNQGVGSSVASSSS*CTKPVA
Trigger: AGCCACAGGTTTTGTACATCAGGAAGAAGAAGAGGC...TACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430746.5
CDS-3UTR TCA 90 bp TGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGGCAACCAACTATATCTaGGGACCAGAGCCATTTTGG +
Preference number: 4 (lower is better)
Translates to: CVLAGKIFRVGLDNQGVGATNYI*GPEPFW
Trigger: CCAAAATGGCTCTGGTCCTCAGATATAGTTGGTTGC...CCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449241.5
CDS-3UTR CCA 90 bp CCCTCTTGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGACATCTTGTTCCTCCGTaGGGTCGAAGTTGTACATGG +
Preference number: 4 (lower is better)
Translates to: PSCVLAGKIFRVGLDNQGHLVPP*GRSCTW
Trigger: CCATGTACAACTTCGACCCCACGGAGGAACAAGATG...TCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACAAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CCA 90 bp CAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGGTCACGTGGAGCTGCTCTaGGTTAAATTACAGCTGTAT +
Preference number: 4 (lower is better)
Translates to: QPQILIRAQDREPFSEAGHVELL*VKLQLY
Trigger: ATACAGCTGTAATTTAACCCAGAGCAGCTCCACGTG...ACCTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR TCA 90 bp TGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGTCCTCTGTCTGTGGGTaGGATGATCATAGTGATCAA +
Preference number: 4 (lower is better)
Translates to: CVLAGKIFRVGLDNQGVGSSVCG*DDHSDQ
Trigger: TTGATCACTATGATCATCTCACCCACAGACAGAGGA...CCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357203.8
CDS-3UTR TCA 90 bp TGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGGCCTCTTCTTCTTCCTaGTGTACAAAACCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: CVLAGKIFRVGLDNQGVGASSSS*CTKPAR
Trigger: TCTTGCAGGTTTTGTACATCAGGAAGAAGAAGAGGC...CCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422619.1
CDS-3UTR GCA 90 bp ATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGGATGTTTTTCTGAAGTaGAATCCCTCACCCACTTTC +
Preference number: 4 (lower is better)
Translates to: IFRVGLDNQGVGSSVGTVDVFLK*NPSPTF
Trigger: GAAAGTGGGTGAGGGATTGCACTTCAGAAAAACATC...CACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS CCA 90 bp GCGGGTCCGACCCGAGATCCGCCCTCCCTGCAAGCCCCGAGCCGCTaGCCAGGCCCGCTACTGCGCACCAGCCGCATCCGCGAGCGCTGG +
Preference number: 5 (lower is better)
Translates to: AGPTRDPPSLQAPSR*PGPLLRTSRIRERW
Trigger: CCAGCGCTCGCGGATGCGGCTGGTGCGCAGTAGCGGGCCTGGCCAGCGGCTCGGGGCTTGCAGGGAGGGCGGATCTCGGGTCGGACCCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000491269.1
CDS TCA 90 bp GCTACTGCGCACCAGCCGCATCCGCGAGCGCTGGCTCTGCCGGCCTaGGCTAGGGTGGGTAGGGCCGGGACCCACGGCGGAGGTGGGGCC +
Preference number: 5 (lower is better)
Translates to: ATAHQPHPRALALPA*ARVGRAGTHGGGGA
Trigger: GGCCCCACCTCCGCCGTGGGTCCCGGCCCTACCCACCCTAGCTCAGGCCGGCAGAGCCAGCGCTCGCGGATGCGGCTGGTGCGCAGTAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357203.8
CDS GCA 90 bp CCAGGCCCGCTACTGCGCACCAGCCGCATCCGCGAGCGCTGGCTCTaGCGGCCTGAGCTAGGGTGGGTAGGGCCGGGACCCACGGCGGAG +
Preference number: 5 (lower is better)
Translates to: PGPLLRTSRIRERWL*RPELGWVGPGPTAE
Trigger: CTCCGCCGTGGGTCCCGGCCCTACCCACCCTAGCTCAGGCCGGCAGAGCCAGCGCTCGCGGATGCGGCTGGTGCGCAGTAGCGGGCCTGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357203.8
CDS GCA 90 bp ATCCGCCCTCCCTGCAAGCCCCGAGCCGCTGGCCAGGCCCGCTACTaGGCACCAGCCGCATCCGCGAGCGCTGGCTCTGCCGGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: IRPPCKPRAAGQARY*APAASASAGSAGLS
Trigger: GCTCAGGCCGGCAGAGCCAGCGCTCGCGGATGCGGCTGGTGCGCAGTAGCGGGCCTGGCCAGCGGCTCGGGGCTTGCAGGGAGGGCGGAT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000430746.5
ENST00000441239.5
ENST00000491269.1
CDS CCA 90 bp CGCTGGCCAGGCCCGCTACTGCGCACCAGCCGCATCCGCGAGCGCTaGCTCTGCCGGCCTGAGCTAGGGTGGGTAGGGCCGGGACCCACG +
Preference number: 5 (lower is better)
Translates to: RWPGPLLRTSRIRER*LCRPELGWVGPGPT
Trigger: CGTGGGTCCCGGCCCTACCCACCCTAGCTCAGGCCGGCAGAGCCAGCGCTCGCGGATGCGGCTGGTGCGCAGTAGCGGGCCTGGCCAGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357203.8
CDS GCA 90 bp CCGGAGTGCCCCAGCCTGTGGTTCCTGCCACCTGTGGTGGCCACCTaGACAGCCACCTCCTTGGATAAAGGGAGCCCCCTGCCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: PECPSLWFLPPVVAT*TATSLDKGSPLPSW
Trigger: CCAGGAAGGCAGGGGGCTCCCTTTATCCAAGGAGGTGGCTGTGCAGGTGGCCACCACAGGTGGCAGGAACCACAGGCTGGGGCACTCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS GCA 90 bp CTGCCTGATGCCAGTCAACCTGCCCACTCACTCCTGACTCCGGAGTaGCCCAGCCTGTGGTTCCTGCCACCTGTGGTGGCCACCTGCACA +
Preference number: 5 (lower is better)
Translates to: LPDASQPAHSLLTPE*PSLWFLPPVVATCT
Trigger: TGTGCAGGTGGCCACCACAGGTGGCAGGAACCACAGGCTGGGGCACTCCGGAGTCAGGAGTGAGTGGGCAGGTTGACTGGCATCAGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS GCA 90 bp AGACTCAGAGGTGGGTGGGCGGCTGCTGAACCAGCCCCTAGCAGATaGGGTCCTGGAGTTCATGCTGATGCGGAGAGGGCCCTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: RLRGGWAAAEPAPSR*GPGVHADAERALAE
Trigger: CTCAGCCAGGGCCCTCTCCGCATCAGCATGAACTCCAGGACCGCATCTGCTAGGGGCTGGTTCAGCAGCCGCCCACCCACCTCTGAGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS CCA 90 bp CTAGCAGATGCGGTCCTGGAGTTCATGCTGATGCGGAGAGGGCCCTaGCTGAGAGGCTGCCTGATGCCAGTCAACCTGCCCACTCACTCC +
Preference number: 5 (lower is better)
Translates to: LADAVLEFMLMRRGP*LRGCLMPVNLPTHS
Trigger: GGAGTGAGTGGGCAGGTTGACTGGCATCAGGCAGCCTCTCAGCCAGGGCCCTCTCCGCATCAGCATGAACTCCAGGACCGCATCTGCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS CCA 90 bp ATGGCAAGGAGAGGAGGCCCTGAGGAACCCAGCAGCCCTTCTGGATaGGGACATGCTGAGGCTGATGAACAAGAGACCCGTGGGTCCCCG +
Preference number: 5 (lower is better)
Translates to: MARRGGPEEPSSPSG*GHAEADEQETRGSP
Trigger: CGGGGACCCACGGGTCTCTTGTTCATCAGCCTCAGCATGTCCCCATCCAGAAGGGCTGCTGGGTTCCTCAGGGCCTCCTCTCCTTGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422619.1
CDS CCA 90 bp TGTGGTTCCTGCCACCTGTGGTGGCCACCTGCACAGCCACCTCCTTaGATAAAGGGAGCCCCCTGCCTTCCTGGGTGCTGCTTTCCTGGT +
Preference number: 5 (lower is better)
Translates to: CGSCHLWWPPAQPPP*IKGAPCLPGCCFPG
Trigger: ACCAGGAAAGCAGCACCCAGGAAGGCAGGGGGCTCCCTTTATCCAAGGAGGTGGCTGTGCAGGTGGCCACCACAGGTGGCAGGAACCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449241.5
CDS-3UTR CAA 90 bp TCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGCGGCGCCGAGCTCAGTaGGAGAGGCTAGGGGTGGTA +
Preference number: 5 (lower is better)
Translates to: SLPLRISLISSTLAGQTLRRRAQ*ERLGVV
Trigger: TACCACCCCTAGCCTCTCCAACTGAGCTCGGCGCCG...CAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
CDS-3UTR CAA 90 bp GGAGGGCAGAGTAGTCTTGCCCTGCATGGCCTGCACAGAAGTAGCAGCCTGTACCGGCGCCGAGCTCAGTaGGAGAGGCTAGGGGTGGTA +
Preference number: 5 (lower is better)
Translates to: GGQSSLALHGLHRSSSLYRRRAQ*ERLGVV
Trigger: TACCACCCCTAGCCTCTCCAACTGAGCTCGGCGCCG...GTACAGGCTGCTACTTCTGTGCAGGCCATGCAGGGCAAGACTACTCTGCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430746.5
CDS-3UTR CAA 90 bp GTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGGGGTAGAGGTCGACTaGGAGGGTGGGGCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: VEVDLEGGASVDNLILPAGVEVD*EGGASV
Trigger: CACACTGGCCCCACCCTCCAAGTCGACCTCTACCCC...AGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp GGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTGGGGTAGAGGTCGACTaGGAGGGTGGGGCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: GSGELCRHRDGSLSEVQAGVEVD*EGGASV
Trigger: CACACTGGCCCCACCCTCCAAGTCGACCTCTACCCC...AGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp TGTGGACAATCTCATTCTGCCCGCTGTGCTGGGACAGGCACATGTCTGCCCATGCGGCGCCGAGCTCAGTaGGAGAGGCTAGGGGTGGTA +
Preference number: 5 (lower is better)
Translates to: CGQSHSARCAGTGTCLPMRRRAQ*ERLGVV
Trigger: TACCACCCCTAGCCTCTCCAACTGAGCTCGGCGCCG...CATGGGCAGACATGTGCCTGTCCCAGCACAGCGGGCAGAATGAGATTGTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
CDS-3UTR CAA 90 bp GCTGCCCTACCCTGTCCCTATAACTTGGGTGGTTTCCTCTCCCCACCCCAGAGGGAGGGCAGAGTAGTCTaGCCCTGCATGGCCTGCACA +
Preference number: 5 (lower is better)
Translates to: AALPCPYNLGGFLSPPQREGRVV*PCMACT
Trigger: TGTGCAGGCCATGCAGGGCAAGACTACTCTGCCCTC...CCTCTGGGGTGGGGAGAGGAAACCACCCAAGTTATAGGGACAGGGTAGGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp ATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGCCCAGTAACATCTGGTaGCCAAGGATGGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: MGGWETSWTLRSMDGPWVPSNIW*PRMGGW
Trigger: CCAGCCACCCATCCTTGGCAACCAGATGTTACTGGG...CACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp CAATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCGGGGTAGAGGTCGACTaGGAGGGTGGGGCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: QSLPLRISLISSTLAGQTGVEVD*EGGASV
Trigger: CACACTGGCCCCACCCTCCAAGTCGACCTCTACCCC...GGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp GGACAGGGGATGAGGAAGCCAGCAGAGGCTCTTGACCTTCTCAGCATGAGGGATGGGGTAGAGGTCGACTaGGAGGGTGGGGCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: GQGMRKPAEALDLLSMRDGVEVD*EGGASV
Trigger: CACACTGGCCCCACCCTCCAAGTCGACCTCTACCCC...ATCCCTCATGCTGAGAAGGTCAAGAGCCTCTGCTGGCTTCCTCATCCCCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS GCA 90 bp CCCAAAGGACAGAAGCATGGTACCCACGCCGGCCGTGCCACCAGCTaGATCAGGGATTCTGGTGTCATTAAAGGTGGTGGCCTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: PKGQKHGTHAGRATS*IRDSGVIKGGGLWA
Trigger: AGCCCAGAGGCCACCACCTTTAATGACACCAGAATCCCTGATGCAGCTGGTGGCACGGCCGGCGTGGGTACCATGCTTCTGTCCTTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
ENST00000491269.1
CDS CCA 90 bp ACCAGCTGCATCAGGGATTCTGGTGTCATTAAAGGTGGTGGCCTCTaGGCTGAGGGTAGTGGTCTCGGAGGCTGGCCCATCTGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: TSCIRDSGVIKGGGL*AEGSGLGGWPICGR
Trigger: CCTGCCACAGATGGGCCAGCCTCCGAGACCACTACCCTCAGCCCAGAGGCCACCACCTTTAATGACACCAGAATCCCTGATGCAGCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
ENST00000491269.1
CDS-3UTR CAA 90 bp AGGATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGCTGCTCCAACTCATCTaGTTCCTCCGTGGGGTCGAA +
Preference number: 5 (lower is better)
Translates to: RMGGWETSWTLRSMDGPWLLQLI*FLRGVE
Trigger: TTCGACCCCACGGAGGAACAAGATGAGTTGGAGCAG...CCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp TGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGTCACGCATGGATGGCATaGGCCACATCGGTAAACACC +
Preference number: 5 (lower is better)
Translates to: WVAGRPPGPSVVWMDPGCHAWMA*ATSVNT
Trigger: GGTGTTTACCGATGTGGCCAATGCCATCCATGCGTG...ACACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp TGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGTCCCTGTCCCTATAACTaGGGTGGTTTCCTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: WVAGRPPGPSVVWMDPGCPCPYN*GGFLSP
Trigger: TGGGGAGAGGAAACCACCCAAGTTATAGGGACAGGG...ACACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS CCA 90 bp TGTGGTTCCTGCCACCTGTGGTGGCCACCTGCACAGCCACCTCCTTaGATAAAGGGAGCCCCCTGCCTTCCTGGGTGTTTACGTATCTAC +
Preference number: 5 (lower is better)
Translates to: CGSCHLWWPPAQPPP*IKGAPCLPGCLRIY
Trigger: GTAGATACGTAAACACCCAGGAAGGCAGGGGGCTCCCTTTATCCAAGGAGGTGGCTGTGCAGGTGGCCACCACAGGTGGCAGGAACCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357203.8
CDS-3UTR CAA 90 bp GCTGCCCTACCCTGTCCCTATAACTTGGGTGGTTTCCTCTCCCCACCCCAGAGGCTGCTCCAACTCATCTaGTTCCTCCGTGGGGTCGAA +
Preference number: 5 (lower is better)
Translates to: AALPCPYNLGGFLSPPQRLLQLI*FLRGVE
Trigger: TTCGACCCCACGGAGGAACAAGATGAGTTGGAGCAG...CCTCTGGGGTGGGGAGAGGAAACCACCCAAGTTATAGGGACAGGGTAGGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp ATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGAGGGCAGAGTAGTCTaGCCCTGCATGGCCTGCACA +
Preference number: 5 (lower is better)
Translates to: IPPTPYLPHFLHISGADPEGRVV*PCMACT
Trigger: TGTGCAGGCCATGCAGGGCAAGACTACTCTGCCCTC...AGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp CTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTTGTCCCAGGCCAGAGGGCAGAGTAGTCTaGCCCTGCATGGCCTGCACA +
Preference number: 5 (lower is better)
Translates to: LCRHRDGSLSEVQACPRPEGRVV*PCMACT
Trigger: TGTGCAGGCCATGCAGGGCAAGACTACTCTGCCCTC...TGGCCTGGGACAAGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp GGTCAGGAGAAGTCAGTGGTCAGAAGTCCAGCCTGGCTAGGGCCCTCTCTTAGAGAGGGCAGAGTAGTCTaGCCCTGCATGGCCTGCACA +
Preference number: 5 (lower is better)
Translates to: GQEKSVVRSPAWLGPSLREGRVV*PCMACT
Trigger: TGTGCAGGCCATGCAGGGCAAGACTACTCTGCCCTC...TCTAAGAGAGGGCCCTAGCCAGGCTGGACTTCTGACCACTGACTTCTCCTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp GTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTATCAGAAGTCCAGGCTaGTCCCAGGCCACTCACGCA +
Preference number: 5 (lower is better)
Translates to: VEVDLEGGASVDNLILPAIRSPG*SQATHA
Trigger: TGCGTGAGTGGCCTGGGACAAGCCTGGACTTCTGAT...AGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp GGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTATCAGAAGTCCAGGCTaGTCCCAGGCCACTCACGCA +
Preference number: 5 (lower is better)
Translates to: GSGELCRHRDGSLSEVQAIRSPG*SQATHA
Trigger: TGCGTGAGTGGCCTGGGACAAGCCTGGACTTCTGAT...AGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp ATGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGCAGCCCTCTTGTGTCTaGGCAGGGAAGATCTTCAGA +
Preference number: 5 (lower is better)
Translates to: MGGWETSWTLRSMDGPWVQPSCV*AGKIFR
Trigger: TCTGAAGATCTTCCCTGCCAAGACACAAGAGGGCTG...CACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp TCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGCCTGGCTCAGCCCTCTaGTGTCTTGGCAGGGAAGAT +
Preference number: 5 (lower is better)
Translates to: SLPLRISLISSTLAGQTLPGSAL*CLGRED
Trigger: ATCTTCCCTGCCAAGACACAAGAGGGCTGAGCCAGG...CAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp GTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTCCTGGCTCAGCCCTCTaGTGTCTTGGCAGGGAAGAT +
Preference number: 5 (lower is better)
Translates to: VEVDLEGGASVDNLILPAPGSAL*CLGRED
Trigger: ATCTTCCCTGCCAAGACACAAGAGGGCTGAGCCAGG...AGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp TCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTGTGCTGGCCCTGTCCCTATAACTaGGGTGGTTTCCTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: STWRVGPVWTISFCPLCWPCPYN*GGFLSP
Trigger: TGGGGAGAGGAAACCACCCAAGTTATAGGGACAGGG...CCAGCACAGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp GACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGGAGGGCAGAGTAGTCTaGCCCTGCATGGCCTGCACA +
Preference number: 5 (lower is better)
Translates to: DNQGVGSSVGTVMGLYQKEGRVV*PCMACT
Trigger: TGTGCAGGCCATGCAGGGCAAGACTACTCTGCCCTC...CTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp GTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCCGCTCACGCATGGATGGCATaGGCCACATCGGTAAACACC +
Preference number: 5 (lower is better)
Translates to: VEVDLEGGASVDNLILPAHAWMA*ATSVNT
Trigger: GGTGTTTACCGATGTGGCCAATGCCATCCATGCGTG...AGCGGGCAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp CACTCACGCATGGATGGCATTGGCCACATCGGTAAACACCAGCCGGCTGGGTCTCACGCATGGATGGCATaGGCCACATCGGTAAACACC +
Preference number: 5 (lower is better)
Translates to: HSRMDGIGHIGKHQPAGSHAWMA*ATSVNT
Trigger: GGTGTTTACCGATGTGGCCAATGCCATCCATGCGTG...AGACCCAGCCGGCTGGTGTTTACCGATGTGGCCAATGCCATCCATGCGTGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430746.5
CDS-3UTR CAA 90 bp TCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGCACGCATGGATGGCATaGGCCACATCGGTAAACACC +
Preference number: 5 (lower is better)
Translates to: SLPLRISLISSTLAGQTLHAWMA*ATSVNT
Trigger: GGTGTTTACCGATGTGGCCAATGCCATCCATGCGTG...CAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp CTGCTCTTGTGGTCTGTCTCTGCCCAATGGCTTGCCAGGACCCCTGGTATCAGCCACGCATGGATGGCATaGGCCACATCGGTAAACACC +
Preference number: 5 (lower is better)
Translates to: LLLWSVSAQWLARTPGISHAWMA*ATSVNT
Trigger: GGTGTTTACCGATGTGGCCAATGCCATCCATGCGTG...GCTGATACCAGGGGTCCTGGCAAGCCATTGGGCAGAGACAGACCACAAGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CAA 90 bp CTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTTGTCCCAGGCCAATCAGAAGTCCAGGCTaGTCCCAGGCCACTCACGCA +
Preference number: 5 (lower is better)
Translates to: LCRHRDGSLSEVQACPRPIRSPG*SQATHA
Trigger: TGCGTGAGTGGCCTGGGACAAGCCTGGACTTCTGAT...TGGCCTGGGACAAGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp GGACAGGGGATGAGGAAGCCAGCAGAGGCTCTTGACCTTCTCAGCATGAGGGATCCTGGCTCAGCCCTCTaGTGTCTTGGCAGGGAAGAT +
Preference number: 5 (lower is better)
Translates to: GQGMRKPAEALDLLSMRDPGSAL*CLGRED
Trigger: ATCTTCCCTGCCAAGACACAAGAGGGCTGAGCCAGG...ATCCCTCATGCTGAGAAGGTCAAGAGCCTCTGCTGGCTTCCTCATCCCCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp ATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTCCTGGCTCAGCCCTCTaGTGTCTTGGCAGGGAAGAT +
Preference number: 5 (lower is better)
Translates to: IPPTPYLPHFLHISGADPPGSAL*CLGRED
Trigger: ATCTTCCCTGCCAAGACACAAGAGGGCTGAGCCAGG...AGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp TGGGTGGCTGGGAGACCTCCTGGACCCTCCGTAGTATGGATGGACCCTGGGTGTCTTCTCCTGGCATCCTaGCATACTGGACAGTTTCAG +
Preference number: 5 (lower is better)
Translates to: WVAGRPPGPSVVWMDPGCLLLAS*HTGQFQ
Trigger: CTGAAACTGTCCAGTATGCAAGGATGCCAGGAGAAG...ACACCCAGGGTCCATCCATACTACGGAGGGTCCAGGAGGTCTCCCAGCCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp GTGAATTGCCCTTCTCCTGGCATCCTTGCATACTGGACAGTTTCAGCTCCATCTCGGCGCCGAGCTCAGTaGGAGAGGCTAGGGGTGGTA +
Preference number: 5 (lower is better)
Translates to: VNCPSPGILAYWTVSAPSRRRAQ*ERLGVV
Trigger: TACCACCCCTAGCCTCTCCAACTGAGCTCGGCGCCG...AGATGGAGCTGAAACTGTCCAGTATGCAAGGATGCCAGGAGAAGGGCAATTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
CDS-3UTR CAA 90 bp CTGCTCTTGTGGTCTGTCTCTGCCCAATGGCTTGCCAGGACCCCTGGTATCAGCCAGCCCTCTTGTGTCTaGGCAGGGAAGATCTTCAGA +
Preference number: 5 (lower is better)
Translates to: LLLWSVSAQWLARTPGISQPSCV*AGKIFR
Trigger: TCTGAAGATCTTCCCTGCCAAGACACAAGAGGGCTG...GCTGATACCAGGGGTCCTGGCAAGCCATTGGGCAGAGACAGACCACAAGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CAA 90 bp GGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCCTGGCTCAGCCCTCTaGTGTCTTGGCAGGGAAGAT +
Preference number: 5 (lower is better)
Translates to: GLDNQGVGSSVGTVMGLYPGSAL*CLGRED
Trigger: ATCTTCCCTGCCAAGACACAAGAGGGCTGAGCCAGG...ATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp GGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCCCAGTAACATCTGGTaGCCAAGGATGGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: GLDNQGVGSSVGTVMGLYPSNIW*PRMGGW
Trigger: CCAGCCACCCATCCTTGGCAACCAGATGTTACTGGG...ATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp CTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCTGATGTGAGGGATCTGGACAGCTCCCATCCTAGCTaGGCCCCAGTAACATCTGGT +
Preference number: 5 (lower is better)
Translates to: LPHFLHISGADPDVRDLDSSHPS*APVTSG
Trigger: ACCAGATGTTACTGGGGCCAAGCTAGGATGGGAGCT...GTCCAGATCCCTCACATCAGGGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp GGGCTTCCTAGGCCTTTCCCTCCTGACACATGGCATTTGCCCAGTGGAAGGTCTAGCTCCCATCCTAGCTaGGCCCCAGTAACATCTGGT +
Preference number: 5 (lower is better)
Translates to: GLPRPFPPDTWHLPSGRSSSHPS*APVTSG
Trigger: ACCAGATGTTACTGGGGCCAAGCTAGGATGGGAGCT...AGACCTTCCACTGGGCAAATGCCATGTGTCAGGAGGGAAAGGCCTAGGAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CAA 90 bp TGTGGACAATCTCATTCTGCCCGCTGTGCTGGGACAGGCACATGTCTGCCCATGCCTGACACATGGCATTaGCCCAGTGGAAGGTCTGCA +
Preference number: 5 (lower is better)
Translates to: CGQSHSARCAGTGTCLPMPDTWH*PSGRSA
Trigger: TGCAGACCTTCCACTGGGCAAATGCCATGTGTCAGG...CATGGGCAGACATGTGCCTGTCCCAGCACAGCGGGCAGAATGAGATTGTCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CAA 90 bp CATGGGGTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCCTGACACATGGCATTaGCCCAGTGGAAGGTCTGCA +
Preference number: 5 (lower is better)
Translates to: HGVEVDLEGGASVDNLILPDTWH*PSGRSA
Trigger: TGCAGACCTTCCACTGGGCAAATGCCATGTGTCAGG...CAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTACCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS TCA 90 bp GCTTTCCTGGTTCCTCTCACTCCCAGGGTGGCAACCAACTATATCTaGGGACCAGAGCCATTTTGGGGCACCAGAGCTTGTGACCTCTCC +
Preference number: 5 (lower is better)
Translates to: AFLVPLTPRVATNYI*GPEPFWGTRACDLS
Trigger: GGAGAGGTCACAAGCTCTGGTGCCCCAAAATGGCTCTGGTCCTCAGATATAGTTGGTTGCCACCCTGGGAGTGAGAGGAACCAGGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464080.5
CDS-3UTR CAA 90 bp CCCAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGCTGCTCCAACTCATCTaGTTCCTCCGTGGGGTCGAA +
Preference number: 5 (lower is better)
Translates to: PNPRSSLEPKTGSRFQKQLLQLI*FLRGVE
Trigger: TTCGACCCCACGGAGGAACAAGATGAGTTGGAGCAG...CTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CAA 90 bp CTGGGCTTCTCAGGGCCCATAACAGATGCTGCCCTACCCTGTCCCTATAACTTGCTGCTCCAACTCATCTaGTTCCTCCGTGGGGTCGAA +
Preference number: 5 (lower is better)
Translates to: LGFSGPITDAALPCPYNLLLQLI*FLRGVE
Trigger: TTCGACCCCACGGAGGAACAAGATGAGTTGGAGCAG...CAAGTTATAGGGACAGGGTAGGGCAGCATCTGTTATGGGCCCTGAGAAGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp ATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATCAGAAGTCCAGGCTaGTCCCAGGCCACTCACGCA +
Preference number: 5 (lower is better)
Translates to: IFRVGLDNQGVGSSVGTVIRSPG*SQATHA
Trigger: TGCGTGAGTGGCCTGGGACAAGCCTGGACTTCTGAT...CACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp CAATCCCTCCCACTCCGTATCTCCCTCATTTCCTCCACATTAGCGGGGCAGACCCAGCCCTCTTGTGTCTaGGCAGGGAAGATCTTCAGA +
Preference number: 5 (lower is better)
Translates to: QSLPLRISLISSTLAGQTQPSCV*AGKIFR
Trigger: TCTGAAGATCTTCCCTGCCAAGACACAAGAGGGCTG...GGTCTGCCCCGCTAATGTGGAGGAAATGAGGGAGATACGGAGTGGGAGGGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp GGACAGGGGATGAGGAAGCCAGCAGAGGCTCTTGACCTTCTCAGCATGAGGGATCAGCCCTCTTGTGTCTaGGCAGGGAAGATCTTCAGA +
Preference number: 5 (lower is better)
Translates to: GQGMRKPAEALDLLSMRDQPSCV*AGKIFR
Trigger: TCTGAAGATCTTCCCTGCCAAGACACAAGAGGGCTG...ATCCCTCATGCTGAGAAGGTCAAGAGCCTCTGCTGGCTTCCTCATCCCCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp CTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGTCCAGGCTTGTCCCAGGCCACAGCCCTCTTGTGTCTaGGCAGGGAAGATCTTCAGA +
Preference number: 5 (lower is better)
Translates to: LCRHRDGSLSEVQACPRPQPSCV*AGKIFR
Trigger: TCTGAAGATCTTCCCTGCCAAGACACAAGAGGGCTG...TGGCCTGGGACAAGCCTGGACTTCTGATAGAGACCCATCACGGTGCCTACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp GGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCCCTGTCCCTATAACTaGGGTGGTTTCCTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: GLDNQGVGSSVGTVMGLYPCPYN*GGFLSP
Trigger: TGGGGAGAGGAAACCACCCAAGTTATAGGGACAGGG...ATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp GACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGGGTCTCTATCAGAAGAGCTCCCATCCTAGCTaGGCCCCAGTAACATCTGGT +
Preference number: 5 (lower is better)
Translates to: DNQGVGSSVGTVMGLYQKSSHPS*APVTSG
Trigger: ACCAGATGTTACTGGGGCCAAGCTAGGATGGGAGCT...CTTCTGATAGAGACCCATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp ATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGCTGCTCCAACTCATCTaGTTCCTCCGTGGGGTCGAA +
Preference number: 5 (lower is better)
Translates to: IFRVGLDNQGVGSSVGTVLLQLI*FLRGVE
Trigger: TTCGACCCCACGGAGGAACAAGATGAGTTGGAGCAG...CACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp TGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGATCAGAAGTCCAGGCTaGTCCCAGGCCACTCACGCA +
Preference number: 5 (lower is better)
Translates to: CVLAGKIFRVGLDNQGVGIRSPG*SQATHA
Trigger: TGCGTGAGTGGCCTGGGACAAGCCTGGACTTCTGAT...CCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp CATGGGGTAGAGGTCGACTTGGAGGGTGGGGCCAGTGTGGACAATCTCATTCTGCTTCTCCTGGCATCCTaGCATACTGGACAGTTTCAG +
Preference number: 5 (lower is better)
Translates to: HGVEVDLEGGASVDNLILLLLAS*HTGQFQ
Trigger: CTGAAACTGTCCAGTATGCAAGGATGCCAGGAGAAG...CAGAATGAGATTGTCCACACTGGCCCCACCCTCCAAGTCGACCTCTACCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp GCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTACCCAGTAACATCTGGTaGCCAAGGATGGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: AGKIFRVGLDNQGVGSSVPSNIW*PRMGGW
Trigger: CCAGCCACCCATCCTTGGCAACCAGATGTTACTGGG...TACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp CCCTCTTGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGATCCGTGGGGTCGAAGTaGTACATGGGCATGAGCTGG +
Preference number: 5 (lower is better)
Translates to: PSCVLAGKIFRVGLDNQGSVGSK*YMGMSW
Trigger: CCAGCTCATGCCCATGTACAACTTCGACCCCACGGA...TCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACAAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp GCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTACTGCTCCAACTCATCTaGTTCCTCCGTGGGGTCGAA +
Preference number: 5 (lower is better)
Translates to: AGKIFRVGLDNQGVGSSVLLQLI*FLRGVE
Trigger: TTCGACCCCACGGAGGAACAAGATGAGTTGGAGCAG...TACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp GCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTACACGCATGGATGGCATaGGCCACATCGGTAAACACC +
Preference number: 5 (lower is better)
Translates to: AGKIFRVGLDNQGVGSSVHAWMA*ATSVNT
Trigger: GGTGTTTACCGATGTGGCCAATGCCATCCATGCGTG...TACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp CTTCTTCCTGATGTACAAAACCTGTGGCTCCCCAGGGCTGAAGAAGAAAGGGAAATCAGAAGTCCAGGCTaGTCCCAGGCCACTCACGCA +
Preference number: 5 (lower is better)
Translates to: LLPDVQNLWLPRAEEEREIRSPG*SQATHA
Trigger: TGCGTGAGTGGCCTGGGACAAGCCTGGACTTCTGAT...TTCCCTTTCTTCTTCAGCCCTGGGGAGCCACAGGTTTTGTACATCAGGAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430746.5
CDS-3UTR CAA 90 bp TGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGCCCTGTCCCTATAACTaGGGTGGTTTCCTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: CVLAGKIFRVGLDNQGVGPCPYN*GGFLSP
Trigger: TGGGGAGAGGAAACCACCCAAGTTATAGGGACAGGG...CCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp GTGAATTGCCCTTCTCCTGGCATCCTTGCATACTGGACAGTTTCAGCTCCATCTCCCAGTAACATCTGGTaGCCAAGGATGGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: VNCPSPGILAYWTVSAPSPSNIW*PRMGGW
Trigger: CCAGCCACCCATCCTTGGCAACCAGATGTTACTGGG...AGATGGAGCTGAAACTGTCCAGTATGCAAGGATGCCAGGAGAAGGGCAATTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000441239.5
ENST00000449241.5
CDS GCA 90 bp TGGCGTAGCTTCTCCAGCCTCTTCTTCTTCCTGATGTACAAAACCTaGAAGAGAAGGAGCAGCATCAAATGGCAAGGAGAGGAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: WRSFSSLFFFLMYKT*KRRSSIKWQGEEAL
Trigger: CAGGGCCTCCTCTCCTTGCCATTTGATGCTGCTCCTTCTCTTGCAGGTTTTGTACATCAGGAAGAAGAAGAGGCTGGAGAAGCTACGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422619.1
CDS-3UTR CAA 90 bp CAACCCCAGATCCTCATTAGAGCCCAAGACAGGGAGCCGTTTTCAGAAGCAGGTCTTCTCCTGGCATCCTaGCATACTGGACAGTTTCAG +
Preference number: 5 (lower is better)
Translates to: QPQILIRAQDREPFSEAGLLLAS*HTGQFQ
Trigger: CTGAAACTGTCCAGTATGCAAGGATGCCAGGAGAAG...ACCTGCTTCTGAAAACGGCTCCCTGTCTTGGGCTCTAATGAGGATCTGGGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CAA 90 bp TTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAGCTCTGTAGGCACCGTGATGAAAAATGCCCTGCTCTaGTGGTCTGTCTCTGCCCAA +
Preference number: 5 (lower is better)
Translates to: FRVGLDNQGVGSSVGTVMKNALL*WSVSAQ
Trigger: TTGGGCAGAGACAGACCACAAGAGCAGGGCATTTTT...CATCACGGTGCCTACAGAGCTCCCCACTCCCTGATTGTCAAGACCTACTCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CAA 90 bp CCCTCTTGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGACCTGACACATGGCATTaGCCCAGTGGAAGGTCTGCA +
Preference number: 5 (lower is better)
Translates to: PSCVLAGKIFRVGLDNQGPDTWH*PSGRSA
Trigger: TGCAGACCTTCCACTGGGCAAATGCCATGTGTCAGG...TCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACAAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS-3UTR CAA 90 bp CCCTCTTGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGACAGCCCTCTTGTGTCTaGGCAGGGAAGATCTTCAGA +
Preference number: 5 (lower is better)
Translates to: PSCVLAGKIFRVGLDNQGQPSCV*AGKIFR
Trigger: TCTGAAGATCTTCCCTGCCAAGACACAAGAGGGCTG...TCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACAAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357203.8
ENST00000422619.1
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000449241.5
CDS-3UTR CAA 90 bp TGTGTCTTGGCAGGGAAGATCTTCAGAGTAGGTCTTGACAATCAGGGAGTGGGGAAAAATGCCCTGCTCTaGTGGTCTGTCTCTGCCCAA +
Preference number: 5 (lower is better)
Translates to: CVLAGKIFRVGLDNQGVGKNALL*WSVSAQ
Trigger: TTGGGCAGAGACAGACCACAAGAGCAGGGCATTTTT...CCCCACTCCCTGATTGTCAAGACCTACTCTGAAGATCTTCCCTGCCAAGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000449241.5
CDS GCA 72 bp CCCTGCAAGCCCCGAGCCGCTGGCCAGGCCCGCTACTaGGCACCAGCCGCATCCGCGAGCGCTGGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: PCKPRAAGQARY*APAASASAGSA
Trigger: GGCAGAGCCAGCGCTCGCGGATGCGGCTGGTGCGCAGTAGCGGGCCTGGCCAGCGGCTCGGGGCTTGCAGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000491269.1
CDS CCA 72 bp ATCCGCGAGCGCTGGCTCTGCCGGCCTGAGCTAGGGTaGGTAGGGCCGGGACCCACGGCGGAGGTGGGGCCG +
Preference number: 6 (lower is better)
Translates to: IRERWLCRPELG*VGPGPTAEVGP
Trigger: CGGCCCCACCTCCGCCGTGGGTCCCGGCCCTACCCACCCTAGCTCAGGCCGGCAGAGCCAGCGCTCGCGGAT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357203.8
CDS CCA 72 bp GGCCCGCTACTGCGCACCAGCCGCATCCGCGAGCGCTaGCTCTGCCGGCCTGAGCTAGGGTGGGTAGGGCCG +
Preference number: 6 (lower is better)
Translates to: GPLLRTSRIRER*LCRPELGWVGP
Trigger: CGGCCCTACCCACCCTAGCTCAGGCCGGCAGAGCCAGCGCTCGCGGATGCGGCTGGTGCGCAGTAGCGGGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357203.8
CDS CCA 72 bp ACCCGAGATCCGCCCTCCCTGCAAGCCCCGAGCCGCTaGCCAGGCCCGCTACTGCGCACCAGCCGCATCCGC +
Preference number: 6 (lower is better)
Translates to: TRDPPSLQAPSR*PGPLLRTSRIR
Trigger: GCGGATGCGGCTGGTGCGCAGTAGCGGGCCTGGCCAGCGGCTCGGGGCTTGCAGGGAGGGCGGATCTCGGGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000441239.5
ENST00000491269.1
CDS GCA 72 bp CTACTGCGCACCAGCCGCATCCGCGAGCGCTGGCTCTaGCGGCCTGAGCTAGGGTGGGTAGGGCCGGGACCC +
Preference number: 6 (lower is better)
Translates to: LLRTSRIRERWL*RPELGWVGPGP
Trigger: GGGTCCCGGCCCTACCCACCCTAGCTCAGGCCGGCAGAGCCAGCGCTCGCGGATGCGGCTGGTGCGCAGTAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357203.8
CDS GCA 72 bp GCCAGTCAACCTGCCCACTCACTCCTGACTCCGGAGTaGCCCAGCCTGTGGTTCCTGCCACCTGTGGTGGCC +
Preference number: 6 (lower is better)
Translates to: ASQPAHSLLTPE*PSLWFLPPVVA
Trigger: GGCCACCACAGGTGGCAGGAACCACAGGCTGGGGCACTCCGGAGTCAGGAGTGAGTGGGCAGGTTGACTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS CAA 90 bp GCGGTCCTGGAGTTCATGTTAATCCTCTCCCGGCGCCGAGCTCAGTaGGAGAGGCTAGGGGTGGTAGTGACTGGCAGGAGGCCGGGGCGG +
Preference number: 6 (lower is better)
Translates to: AVLEFMLILSRRRAQ*ERLGVVVTGRRPGR
Trigger: CCGCCCCGGCCTCCTGCCAGTCACTACCACCCCTAGCCTCTCCAACTGAGCTCGGCGCCGGGAGAGGATTAACATGAACTCCAGGACCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441239.5
ENST00000491269.1
CDS CAA 90 bp CTGGGAGGGCAGAGTAGTTTAATCCTCTCCCGGCGCCGAGCTCAGTaGGAGAGGCTAGGGGTGGTAGTGACTGGCAGGAGGCCGGGGCGG +
Preference number: 6 (lower is better)
Translates to: LGGQSSLILSRRRAQ*ERLGVVVTGRRPGR
Trigger: CCGCCCCGGCCTCCTGCCAGTCACTACCACCCCTAGCCTCTCCAACTGAGCTCGGCGCCGGGAGAGGATTAAACTACTCTGCCCTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485902.1
CDS GCA 72 bp CCCAGCCTGTGGTTCCTGCCACCTGTGGTGGCCACCTaGACAGCCACCTCCTTGGATAAAGGGAGCCCCCTG +
Preference number: 6 (lower is better)
Translates to: PSLWFLPPVVAT*TATSLDKGSPL
Trigger: CAGGGGGCTCCCTTTATCCAAGGAGGTGGCTGTGCAGGTGGCCACCACAGGTGGCAGGAACCACAGGCTGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS CCA 72 bp GCGGTCCTGGAGTTCATGCTGATGCGGAGAGGGCCCTaGCTGAGAGGCTGCCTGATGCCAGTCAACCTGCCC +
Preference number: 6 (lower is better)
Translates to: AVLEFMLMRRGP*LRGCLMPVNLP
Trigger: GGGCAGGTTGACTGGCATCAGGCAGCCTCTCAGCCAGGGCCCTCTCCGCATCAGCATGAACTCCAGGACCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357203.8
ENST00000426034.5
ENST00000430746.5
ENST00000449241.5
CDS GCA 72 bp GGTGGGTGGGCGGCTGCTGAACCAGCCCCTAGCAGATaGGGTCCTGGAGTTCATGTTAATCCTCTCCCGGCG +
Preference number: 6 (lower is better)
Translates to: GGWAAAEPAPSR*GPGVHVNPLPA
Trigger: CGCCGGGAGAGGATTAACATGAACTCCAGGACCGCATCTGCTAGGGGCTGGTTCAGCAGCCGCCCACCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441239.5
ENST00000491269.1
CDS CAA 90 bp CTGTGGTTCCTGCCACCTGTGGTGGCCACCTGCACAGCCACCTCCTaGGATAAAGGGAGCCCCCTGCCTTCCTGGGTGCTGCTTTCCTGG +
Preference number: 6 (lower is better)
Translates to: LWFLPPVVATCTATS*DKGSPLPSWVLLSW
Trigger: CCAGGAAAGCAGCACCCAGGAAGGCAGGGGGCTCCCTTTATCCAAGGAGGTGGCTGTGCAGGTGGCCACCACAGGTGGCAGGAACCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449241.5
CDS CAA 72 bp TCCTGGGTGTTAATCCTCTCCCGGCGCCGAGCTCAGTaGGAGAGGCTAGGGGTGGTAGTGACTGGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: SWVLILSRRRAQ*ERLGVVVTGRR
Trigger: CCTCCTGCCAGTCACTACCACCCCTAGCCTCTCCAACTGAGCTCGGCGCCGGGAGAGGATTAACACCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426034.5
ENST00000430746.5
CDS CAA 90 bp CTGTGGTTCCTGCCACCTGTGGTGGCCACCTGCACAGCCACCTCCTaGGATAAAGGGAGCCCCCTGCCTTCCTGGGTGTTAATCCTCTCC +
Preference number: 6 (lower is better)
Translates to: LWFLPPVVATCTATS*DKGSPLPSWVLILS
Trigger: GGAGAGGATTAACACCCAGGAAGGCAGGGGGCTCCCTTTATCCAAGGAGGTGGCTGTGCAGGTGGCCACCACAGGTGGCAGGAACCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426034.5
ENST00000430746.5
CDS CCA 72 bp TGCCACCTGTGGTGGCCACCTGCACAGCCACCTCCTTaGATAAAGGGAGCCCCCTGCCTTCCTGGGTGTTTA +
Preference number: 6 (lower is better)
Translates to: CHLWWPPAQPPP*IKGAPCLPGCL
Trigger: TAAACACCCAGGAAGGCAGGGGGCTCCCTTTATCCAAGGAGGTGGCTGTGCAGGTGGCCACCACAGGTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357203.8
CDS GCA 72 bp CCTGCACAGCCACCTCCTTGGATAAAGGGAGCCCCCTaGCTTCCTGGGTGTTTACGTATCTACGGTGCCCCT +
Preference number: 6 (lower is better)
Translates to: PAQPPPWIKGAP*LPGCLRIYGAP
Trigger: AGGGGCACCGTAGATACGTAAACACCCAGGAAGGCAGGGGGCTCCCTTTATCCAAGGAGGTGGCTGTGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357203.8
CDS CCA 72 bp AGAGGAGGCCCTGAGGAACCCAGCAGCCCTTCTGGATaGGGACATGCTGAGGCTGATGAACAAGAGACCCGT +
Preference number: 6 (lower is better)
Translates to: RGGPEEPSSPSG*GHAEADEQETR
Trigger: ACGGGTCTCTTGTTCATCAGCCTCAGCATGTCCCCATCCAGAAGGGCTGCTGGGTTCCTCAGGGCCTCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422619.1
CDS CAA 72 bp GAGTTCATGTTAATCCTCTCCCGGCGCCGAGCTCAGTaGGAGAGGCTAGGGGTGGTAGTGACTGGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: EFMLILSRRRAQ*ERLGVVVTGRR
Trigger: CCTCCTGCCAGTCACTACCACCCCTAGCCTCTCCAACTGAGCTCGGCGCCGGGAGAGGATTAACATGAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441239.5
ENST00000491269.1
CDS CAA 72 bp CAGAGTAGTTTAATCCTCTCCCGGCGCCGAGCTCAGTaGGAGAGGCTAGGGGTGGTAGTGACTGGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: QSSLILSRRRAQ*ERLGVVVTGRR
Trigger: CCTCCTGCCAGTCACTACCACCCCTAGCCTCTCCAACTGAGCTCGGCGCCGGGAGAGGATTAAACTACTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485902.1
CDS CAA 90 bp CTGTGGTTCCTGCCACCTGTGGTGGCCACCTGCACAGCCACCTCCTaGGATAAAGGGAGCCCCCTGCCTTCCTGGGTGTTTACGTATCTA +
Preference number: 6 (lower is better)
Translates to: LWFLPPVVATCTATS*DKGSPLPSWVFTYL
Trigger: TAGATACGTAAACACCCAGGAAGGCAGGGGGCTCCCTTTATCCAAGGAGGTGGCTGTGCAGGTGGCCACCACAGGTGGCAGGAACCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357203.8
CDS CAA 72 bp GTACAAAACTTAATCCTCTCCCGGCGCCGAGCTCAGTaGGAGAGGCTAGGGGTGGTAGTGACTGGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: VQNLILSRRRAQ*ERLGVVVTGRR
Trigger: CCTCCTGCCAGTCACTACCACCCCTAGCCTCTCCAACTGAGCTCGGCGCCGGGAGAGGATTAAGTTTTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486175.5
CDS TCA 72 bp GTTCCTCTCACTCCCAGGGTGGCAACCAACTATATCTaGGGACCAGAGCCATTTTGGGGCACCAGAGCTTGT +
Preference number: 6 (lower is better)
Translates to: VPLTPRVATNYI*GPEPFWGTRAC
Trigger: ACAAGCTCTGGTGCCCCAAAATGGCTCTGGTCCTCAGATATAGTTGGTTGCCACCCTGGGAGTGAGAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449241.5
ENST00000464080.5
CDS GCA 72 bp TTCTCCAGCCTCTTCTTCTTCCTGATGTACAAAACCTaGAAGAGAAGGAGCAGCATCAAATGGCAAGGAGAG +
Preference number: 6 (lower is better)
Translates to: FSSLFFFLMYKT*KRRSSIKWQGE
Trigger: CTCTCCTTGCCATTTGATGCTGCTCCTTCTCTTGCAGGTTTTGTACATCAGGAAGAAGAAGAGGCTGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422619.1