RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C2ORF81 (Homo sapiens)

Ensembl gene IDs: ENSG00000284308

Ensembl transcript IDs: ENST00000290390.9, ENST00000612891.4, ENST00000638555.1, ENST00000640331.1, ENST00000640371.1, ENST00000640868.1, ENST00000684111.1

Found 342 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCAGCGTGACCACACTTTaGGGGCTGAGTTCTTCATTA +
Preference number: 2 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCSVTTL*GLSSSL
Trigger: TAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCT...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
3UTR-3UTR CCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTAAGCGTGACCACACTTTaGGGGCTGAGTTCTTCATTA +
Preference number: 2 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLSVTTL*GLSSSL
Trigger: TAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCT...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTGAGTGCCCGGCCCGCTaGTGCTGGCAGGACGCGGAG +
Preference number: 4 (lower is better)
Translates to: GLEERDHTLGAEFFISCAECPAR*CWQDAE
Trigger: CTCCGCGTCCTGCCAGCAGCAGCGGGCCGGGCACTC...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGAGTGCCCGGCCCGCTaGTGCTGGCAGGACGCGGAG +
Preference number: 4 (lower is better)
Translates to: AGLEERDHTLGAEFFISCECPAR*CWQDAE
Trigger: CTCCGCGTCCTGCCAGCAGCAGCGGGCCGGGCACTC...ACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCCGCACATCCGAGTaGCCGGCCCGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFISRTSE*PARCCW
Trigger: CCAGCAGCAGCGGGCCGGGCACTCGGATGTGCGGCT...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTCCAGGCCCTCCGAGGTaGACGCGTGCAGCACGGGCA +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFIPGPPR*TRAARA
Trigger: TGCCCGTGCTGCACGCGTCCACCTCGGAGGGCCTGG...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTGTTCGGCCCGGGCCTTaGTCTTCTCGCCCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFIVRPGP*SSRPAG
Trigger: GCCAGCGGGGCGAGAAGACCAAGGCCCGGGCCGAAC...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTGTGTCCCCTCCCAGTTaGGGCCTGGGGGCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFIVSPPS*GLGAGY
Trigger: GTAGCCAGCCCCCAGGCCTCAACTGGGAGGGGACAC...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTAGCCGCACATCCGAGTaGCCGGCCCGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GLEERDHTLGAEFFISCASRTSE*PARCCW
Trigger: CCAGCAGCAGCGGGCCGGGCACTCGGATGTGCGGCT...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTATCCACCTGCGGCACTaGCACAGTGGGCGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFIIHLRH*HSGRPH
Trigger: GTGCGGCCGCCCACTGTGCCAGTGCCGCAGGTGGAT...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTCCAGGCCCTCCGAGGTaGACGCGTGCAGCACGGGCA +
Preference number: 4 (lower is better)
Translates to: GLEERDHTLGAEFFISCAPGPPR*TRAARA
Trigger: TGCCCGTGCTGCACGCGTCCACCTCGGAGGGCCTGG...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTAGAGGGCGCACCCAGTaGCACGGGAGCCTCGCAGGG +
Preference number: 4 (lower is better)
Translates to: GLEERDHTLGAEFFISCARGRTQ*HGSLAG
Trigger: CCCTGCGAGGCTCCCGTGCCACTGGGTGCGCCCTCT...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTCACTGGGCCACAGCTTaGGGCTGCGGCTGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: AGLEERDHTLGAEFFISCHWATA*GCGCGP
Trigger: TGGCCCGCAGCCGCAGCCCCAAGCTGTGGCCCAGTG...ACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTGGAAGCGCCACTCGGTaGTCTGCAGCATGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFIGSATR*SAAWPP
Trigger: GGGAGGCCATGCTGCAGATCACCGAGTGGCGCTTCC...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTGCACCCCCTCTGACCTaGGTTCCAGCCGATCCCCAG +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFIAPPLT*VPADPQ
Trigger: CTGGGGATCGGCTGGAACTCAGGTCAGAGGGGGTGC...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTGCAGGGCACCCCCTCTaGCCTGAGTTCCAGCCGATC +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFIAGHPL*PEFQPI
Trigger: GATCGGCTGGAACTCAGGTCAGAGGGGGTGCCCTGC...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTCGCCACTCGGTGATCTaGAGCATGGCCTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GLEERDHTLGAEFFISCARHSVI*SMASRA
Trigger: GGCCCGGGAGGCCATGCTGCAGATCACCGAGTGGCG...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTTCCGAGGTGGACGCGTaGAGCACGGGCACTGAACCC +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFISEVDA*STGTEP
Trigger: GGGTTCAGTGCCCGTGCTGCACGCGTCCACCTCGGA...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACACGCCCGAGGCGATaGAGGGCACCCCCTCTGACC +
Preference number: 4 (lower is better)
Translates to: GLEERDHTLGAEFFISCATRPRR*RAPPLT
Trigger: GGTCAGAGGGGGTGCCCTGCATCGCCTCGGGCGTGT...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTACACGCCCGAGGCGATaGAGGGCACCCCCTCTGACC +
Preference number: 4 (lower is better)
Translates to: AGLEERDHTLGAEFFISCTRPRR*RAPPLT
Trigger: GGTCAGAGGGGGTGCCCTGCATCGCCTCGGGCGTGT...ACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGGAGTGCCCGGCCCGCTaGTGCTGGCAGGACGCGGAG +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLECPAR*CWQDAE
Trigger: CTCCGCGTCCTGCCAGCAGCAGCGGGCCGGGCACTC...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGAGCCGCACATCCGAGTaGCCGGCCCGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LEERDHTLGAEFFISCATSRTSE*PARCCW
Trigger: CCAGCAGCAGCGGGCCGGGCACTCGGATGTGCGGCT...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTTGGGGCTGCGGCTaGGGGCCACATCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: AGLEERDHTLGAEFFISCAWGCG*GPHQGA
Trigger: TGCTCCCTGATGTGGCCCGCAGCCGCAGCCCCAAGC...ACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTCTGGCCCTCCCTGTCTaGCAGCTCCAGACCCTGTGG +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFILALPV*QLQTLW
Trigger: CCACAGGGTCTGGAGCTGGCAGACAGGGAGGGCCAG...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGCCAGGCCCTCCGAGGTaGACGCGTGCAGCACGGGCA +
Preference number: 4 (lower is better)
Translates to: LEERDHTLGAEFFISCATPGPPR*TRAARA
Trigger: TGCCCGTGCTGCACGCGTCCACCTCGGAGGGCCTGG...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGAGAGGGCGCACCCAGTaGCACGGGAGCCTCGCAGGG +
Preference number: 4 (lower is better)
Translates to: LEERDHTLGAEFFISCATRGRTQ*HGSLAG
Trigger: CCCTGCGAGGCTCCCGTGCCACTGGGTGCGCCCTCT...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGGTTCGGCCCGGGCCTTaGTCTTCTCGCCCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: LEERDHTLGAEFFISCATVRPGP*SSRPAG
Trigger: GCCAGCGGGGCGAGAAGACCAAGGCCCGGGCCGAAC...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCGTTCGGCCCGGGCCTTaGTCTTCTCGCCCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCVRPGP*SSRPAG
Trigger: GCCAGCGGGGCGAGAAGACCAAGGCCCGGGCCGAAC...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCCAGCTCCAGACCCTGTaGAGGCACGCGGGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCQLQTL*RHAGPA
Trigger: GGCCGGACCCGCGTGCCTCCACAGGGTCTGGAGCTG...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTACGGGCACTGAACCCTaGGCCCAGGAGTCCGTCGTG +
Preference number: 4 (lower is better)
Translates to: AGLEERDHTLGAEFFISCTGTEP*AQESVV
Trigger: CACGACGGACTCCTGGGCTCAGGGTTCAGTGCCCGT...ACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGAGGAGGGGCCGACGTaGCTCTCAGCTGCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: AGLEERDHTLGAEFFISCEEGPT*LSAAEK
Trigger: CTTCTCCGCAGCTGAGAGTCACGTCGGCCCCTCCTC...ACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCGTGTCCCCTCCCAGTTaGGGCCTGGGGGCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCVSPPS*GLGAGY
Trigger: GTAGCCAGCCCCCAGGCCTCAACTGGGAGGGGACAC...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTGCAGGGCACCCCCTCTaGCCTGAGTTCCAGCCGATC +
Preference number: 4 (lower is better)
Translates to: GLEERDHTLGAEFFISCAAGHPL*PEFQPI
Trigger: GATCGGCTGGAACTCAGGTCAGAGGGGGTGCCCTGC...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTCAGGCACACCAGAGCTaGGCAACACCTGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFIQAHQS*ATPGCS
Trigger: GGAGCACCCAGGTGTTGCTCAGCTCTGGTGTGCCTG...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTAGAGGGAGACGAGTCTaGAGGACCCGGATCCCGGCC +
Preference number: 4 (lower is better)
Translates to: GLEERDHTLGAEFFISCARGRRV*RTRIPA
Trigger: GGCCGGGATCCGGGTCCTTCAGACTCGTCTCCCTCT...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640868.1
CDS-3UTR GCA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGCGCCACTCGGTGATCTaGAGCATGGCCTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: LEERDHTLGAEFFISCATRHSVI*SMASRA
Trigger: GGCCCGGGAGGCCATGCTGCAGATCACCGAGTGGCG...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTTCCGAGGTGGACGCGTaGAGCACGGGCACTGAACCC +
Preference number: 4 (lower is better)
Translates to: AGLEERDHTLGAEFFISCSEVDA*STGTEP
Trigger: GGGTTCAGTGCCCGTGCTGCACGCGTCCACCTCGGA...ACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTGAGAGGGAAGAACGCTaGCGGGGAGACACGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GLEERDHTLGAEFFISCAEREER*RGDTGA
Trigger: GGCACCCGTGTCTCCCCGGCAGCGTTCTTCCCTCTC...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGTGGGGAACAGGAGTaGGGGGCCCGAGTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFISGEQE*GARVQV
Trigger: GACTTGGACTCGGGCCCCGCACTCCTGTTCCCCACT...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGGCTTGGGGCTGCGGCTaGGGGCCACATCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: LEERDHTLGAEFFISCATAWGCG*GPHQGA
Trigger: TGCTCCCTGATGTGGCCCGCAGCCGCAGCCCCAAGC...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCGCCACAGCTTGGGGCTaGGGCTGCGGGCCACATCAG +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCATAWG*GCGPHQ
Trigger: CTGATGTGGCCCGCAGCCGCAGCCCCAAGCTGTGGC...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTTGGTTCGAGGCCATCTaGCAGGATCCTGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFIWFEAI*QDPGPP
Trigger: GGGAGGGCCAGGATCCTGGCAGATGGCCTCGAACCA...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTGCAGTGAGCAGAGACTaGGCCACTGCACCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFIAVSRD*ATAPQP
Trigger: AGGCTGGGGTGCAGTGGCGCAGTCTCTGCTCACTGC...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640868.1
CDS-3UTR CCA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTGCGGCACTGGCACAGTaGGCGGCCGCACTTTTTCCG +
Preference number: 4 (lower is better)
Translates to: GLEERDHTLGAEFFISCAAALAQ*AAALFP
Trigger: CGGAAAAAGTGCGGCCGCCCACTGTGCCAGTGCCGC...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGATCCACCTGCGGCACTaGCACAGTGGGCGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: LEERDHTLGAEFFISCATIHLRH*HSGRPH
Trigger: GTGCGGCCGCCCACTGTGCCAGTGCCGCAGGTGGAT...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTCGCATCCTGTGGTGGTaGGCGCTCAGCCGCACATCC +
Preference number: 4 (lower is better)
Translates to: GLEERDHTLGAEFFISCARILWW*ALSRTS
Trigger: GGATGTGCGGCTGAGCGCCCACCACCACAGGATGCG...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCCGGCGCATCCTGTGGTaGTGGGCGCTCAGCCGCACA +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCRRILW*WALSRT
Trigger: TGTGCGGCTGAGCGCCCACCACCACAGGATGCGCCG...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCACTGGGCCACAGCTTaGGGCTGCGGCTGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLHWATA*GCGCGP
Trigger: TGGCCCGCAGCCGCAGCCCCAAGCTGTGGCCCAGTG...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTCGGTCACCTGGGCTTTaGGGCACCTGTCTGGATGGG +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFIRSPGL*GTCLDG
Trigger: CCCATCCAGACAGGTGCCCCAAAGCCCAGGTGACCG...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTTCCACTCGGCCTCACTaGGCCGCCCAGGCACAATAT +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFISTRPH*AAQAQY
Trigger: ATATTGTGCCTGGGCGGCTCAGTGAGGCCGAGTGGA...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCACGGGCACTGAACCCTaGGCCCAGGAGTCCGTCGTG +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCTGTEP*AQESVV
Trigger: CACGACGGACTCCTGGGCTCAGGGTTCAGTGCCCGT...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCGTGCAGCACGGGCACTaGACCCTGAGCCCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCVQHGH*TLSPGV
Trigger: GACTCCTGGGCTCAGGGTTCAGTGCCCGTGCTGCAC...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTCTCCTGAAACAGCTCTaGTGTGGGAGGAGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFILLKQL*CGRRGR
Trigger: TCGGCCCCTCCTCCCACATCAGAGCTGTTTCAGGAG...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTCCGGGCCCTGCCTCCTaGAACAGCTCTGATGTGGGA +
Preference number: 4 (lower is better)
Translates to: AGLEERDHTLGAEFFISCPGPAS*NSSDVG
Trigger: TCCCACATCAGAGCTGTTTCAGGAGGCAGGGCCCGG...ACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGGCACCCCCTCTGACCTaGGTTCCAGCCGATCCCCAG +
Preference number: 4 (lower is better)
Translates to: LEERDHTLGAEFFISCATAPPLT*VPADPQ
Trigger: CTGGGGATCGGCTGGAACTCAGGTCAGAGGGGGTGC...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCGCACCCCCTCTGACCTaGGTTCCAGCCGATCCCCAG +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCAPPLT*VPADPQ
Trigger: CTGGGGATCGGCTGGAACTCAGGTCAGAGGGGGTGC...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTTCCAAGGGGCGTGTTTaGGAGTCTGGGACCAGGACC +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFISKGRV*ESGTRT
Trigger: GGTCCTGGTCCCAGACTCTCAAACACGCCCCTTGGA...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTTGGGAGTGGCAGCTTTaGCTCGAGGGATGGCGACGA +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFIWEWQL*LEGWRR
Trigger: TCGTCGCCATCCCTCGAGTCAAAGCTGCCACTCCCA...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTGCACCGGGTGTGTGGTaGGGAAGCGGATCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: GLEERDHTLGAEFFISCAAPGVW*GSGSWS
Trigger: ACTCCAGGATCCGCTTCCTCACCACACACCCGGTGC...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGAACCGCTGGGCCACCTaGCACTGGGCCACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LEERDHTLGAEFFISCATNRWAT*HWATAW
Trigger: CCAAGCTGTGGCCCAGTGTCAGGTGGCCCAGCGGTT...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCAACCGCTGGGCCACCTaGCACTGGGCCACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCNRWAT*HWATAW
Trigger: CCAAGCTGTGGCCCAGTGTCAGGTGGCCCAGCGGTT...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTCAGTGGAGTGGGGTGTaGCAGAATGGGGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: AGLEERDHTLGAEFFISCQWSGV*QNGGLG
Trigger: GCCCAAGCCCCCATTCTGGCACACCCCACTCCACTG...ACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000290390.9
CDS-3UTR GCA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGCCGCGGTCTCGGACCTaGCTCTCCTGCCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: LEERDHTLGAEFFISCATPRSRT*LSCLWT
Trigger: TGTCCAGAGGCAGGAGAGGCAGGTCCGAGACCGCGG...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290390.9
CDS-3UTR GCA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTCCCAGGAGTCCGTCGTaGATGCCGAAGGCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: GLEERDHTLGAEFFISCAPRSPS*MPKAPR
Trigger: ACGAGGAGCCTTCGGCATGCACGACGGACTCCTGGG...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCTCCGAGGTGGACGCGTaGAGCACGGGCACTGAACCC +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCSEVDA*STGTEP
Trigger: GGGTTCAGTGCCCGTGCTGCACGCGTCCACCTCGGA...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCGAGAGGGAAGAACGCTaGCGGGGAGACACGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCEREER*RGDTGA
Trigger: GGCACCCGTGTCTCCCCGGCAGCGTTCTTCCCTCTC...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGCTGGCCCTCCCTGTCTaGCAGCTCCAGACCCTGTGG +
Preference number: 4 (lower is better)
Translates to: LEERDHTLGAEFFISCATLALPV*QLQTLW
Trigger: CCACAGGGTCTGGAGCTGGCAGACAGGGAGGGCCAG...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCCTGGCCCTCCCTGTCTaGCAGCTCCAGACCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCLALPV*QLQTLW
Trigger: CCACAGGGTCTGGAGCTGGCAGACAGGGAGGGCCAG...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCACTTTTTCCGCCTTaGACCGGGTCACCCCGCGGT +
Preference number: 4 (lower is better)
Translates to: AGLEERDHTLGAEFFISCALFPP*TGSPRG
Trigger: ACCGCGGGGTGACCCGGTCCAAGGCGGAAAAAGTGC...ACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGATCCACCTGCGGCACTaGCACAGTGGGCGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLIHLRH*HSGRPH
Trigger: GTGCGGCCGCCCACTGTGCCAGTGCCGCAGGTGGAT...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCGGCGCATCCTGTGGTaGTGGGCGCTCAGCCGCACA +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLRRILW*WALSRT
Trigger: TGTGCGGCTGAGCGCCCACCACCACAGGATGCGCCG...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGTTGCGGCGCATCCTGTaGTGGTGGGCGCTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLLRRIL*WWALSR
Trigger: GCGGCTGAGCGCCCACCACCACAGGATGCGCCGCAA...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTAAGAGGGCGCACCCAGTaGCACGGGAGCCTCGCAGGG +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLRGRTQ*HGSLAG
Trigger: CCCTGCGAGGCTCCCGTGCCACTGGGTGCGCCCTCT...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACACTGGGCCACAGCTTaGGGCTGCGGCTGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLHWATA*GCGCGP
Trigger: TGGCCCGCAGCCGCAGCCCCAAGCTGTGGCCCAGTG...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACAGCTCCAGACCCTGTaGAGGCACGCGGGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLQLQTL*RHAGPA
Trigger: GGCCGGACCCGCGTGCCTCCACAGGGTCTGGAGCTG...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTCAAGGACCGGGGGTGTaGTTCGAGGCCATCTGCCAG +
Preference number: 4 (lower is better)
Translates to: AGLEERDHTLGAEFFISCQGPGV*FEAICQ
Trigger: CTGGCAGATGGCCTCGAACCACACCCCCGGTCCTTG...ACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTCACTGCACCCCAGCCTaGCGACAGAGCAAGACTGCG +
Preference number: 4 (lower is better)
Translates to: AGLEERDHTLGAEFFISCHCTPA*RQSKTA
Trigger: CGCAGTCTTGCTCTGTCGCCAGGCTGGGGTGCAGTG...ACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640868.1
CDS-3UTR CCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTGGAGAGCAGGAGCAATaGCAGAGGAGTCCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFIGEQEQ*QRSPER
Trigger: CCTCTCCGGACTCCTCTGCCATTGCTCCTGCTCTCC...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640868.1
CDS-3UTR TCA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTTCCACTCGGCCTCACTaGGCCGCCCAGGCACAATAT +
Preference number: 4 (lower is better)
Translates to: GLEERDHTLGAEFFISCASTRPH*AAQAQY
Trigger: ATATTGTGCCTGGGCGGCTCAGTGAGGCCGAGTGGA...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGGGAAGCGCCACTCGGTaGTCTGCAGCATGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLGSATR*SAAWPP
Trigger: GGGAGGCCATGCTGCAGATCACCGAGTGGCGCTTCC...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGGTGCAGCACGGGCACTaGACCCTGAGCCCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLVQHGH*TLSPGV
Trigger: GACTCCTGGGCTCAGGGTTCAGTGCCCGTGCTGCAC...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTCTCCTGAAACAGCTCTaGTGTGGGAGGAGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: AGLEERDHTLGAEFFISCLLKQL*CGRRGR
Trigger: TCGGCCCCTCCTCCCACATCAGAGCTGTTTCAGGAG...ACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTAGTGTCCCCTCCCAGTTaGGGCCTGGGGGCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLVSPPS*GLGAGY
Trigger: GTAGCCAGCCCCCAGGCCTCAACTGGGAGGGGACAC...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTTCCAAGGGGCGTGTTTaGGAGTCTGGGACCAGGACC +
Preference number: 4 (lower is better)
Translates to: GLEERDHTLGAEFFISCASKGRV*ESGTRT
Trigger: GGTCCTGGTCCCAGACTCTCAAACACGCCCCTTGGA...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCCAGGCACACCAGAGCTaGGCAACACCTGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCQAHQS*ATPGCS
Trigger: GGAGCACCCAGGTGTTGCTCAGCTCTGGTGTGCCTG...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGTCCGGAGAGGCTCCTaGGGAGTGTACTTCGCCTTG +
Preference number: 4 (lower is better)
Translates to: AGLEERDHTLGAEFFISCVRRGS*GVYFAL
Trigger: CAAGGCGAAGTACACTCCTCAGGAGCCTCTCCGGAC...ACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640868.1
CDS-3UTR GCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTCGGACCTGCCTCTCCTaGCTCTGGACAATAGGTGAC +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFIRTCLS*LWTIGD
Trigger: GTCACCTATTGTCCAGAGGCAGGAGAGGCAGGTCCG...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290390.9
CDS-3UTR GCA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTGGGGTCCTCAGCTACTaGAGATTCTCCCTCGTCCCG +
Preference number: 4 (lower is better)
Translates to: GLEERDHTLGAEFFISCAGVLSY*RFSLVP
Trigger: CGGGACGAGGGAGAATCTGCAGTAGCTGAGGACCCC...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGGGAGTCCGTCGTGCATaGCGAAGGCTCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: LEERDHTLGAEFFISCATGVRRA*RRLLVL
Trigger: GAGGACGAGGAGCCTTCGGCATGCACGACGGACTCC...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTAACACGCCCGAGGCGATaGAGGGCACCCCCTCTGACC +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLTRPRR*RAPPLT
Trigger: GGTCAGAGGGGGTGCCCTGCATCGCCTCGGGCGTGT...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCGTTTCACGGCCGCCTTaGGGCGCATCCTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCVSRPP*GASCGG
Trigger: ACCACCACAGGATGCGCCGCAAGGCGGCCGTGAAAC...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGGTTTCACGGCCGCCTTaGGGCGCATCCTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LEERDHTLGAEFFISCATVSRPP*GASCGG
Trigger: ACCACCACAGGATGCGCCGCAAGGCGGCCGTGAAAC...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTAGCTTGGGGCTGCGGCTaGGGGCCACATCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLAWGCG*GPHQGA
Trigger: TGCTCCCTGATGTGGCCCGCAGCCGCAGCCCCAAGC...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTAGCCACAGCTTGGGGCTaGGGCTGCGGGCCACATCAG +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLATAWG*GCGPHQ
Trigger: CTGATGTGGCCCGCAGCCGCAGCCCCAAGCTGTGGC...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCTGGTTCGAGGCCATCTaGCAGGATCCTGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCWFEAI*QDPGPP
Trigger: GGGAGGGCCAGGATCCTGGCAGATGGCCTCGAACCA...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGTGGTTCGAGGCCATCTaGCAGGATCCTGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: LEERDHTLGAEFFISCATWFEAI*QDPGPP
Trigger: GGGAGGGCCAGGATCCTGGCAGATGGCCTCGAACCA...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCCGCGGTCTCGGACCTaGCTCTCCTGCCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLPRSRT*LSCLCE
Trigger: CTCACAGAGGCAGGAGAGGCAGGTCCGAGACCGCGG...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640868.1
CDS-3UTR CCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTTCCTCCACCGACAGTTaGAAGCTCGCGCTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFISSTDS*KLALKD
Trigger: GTCCTTGAGCGCGAGCTTCCAACTGTCGGTGGAGGA...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACGGCGCATCCTGTGGTaGTGGGCGCTCAGCCGCACA +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLRRILW*WALSRT
Trigger: TGTGCGGCTGAGCGCCCACCACCACAGGATGCGCCG...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTATTGCGGCGCATCCTGTaGTGGTGGGCGCTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLLRRIL*WWALSR
Trigger: GCGGCTGAGCGCCCACCACCACAGGATGCGCCGCAA...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCCAAGGACCGGGGGTGTaGTTCGAGGCCATCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCQGPGV*FEAICQ
Trigger: CTGGCAGATGGCCTCGAACCACACCCCCGGTCCTTG...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTCAGCTTCAGGGCTTCTaGCAGCAACACGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFIQLQGF*QQHGLP
Trigger: TGGAAGCCCGTGTTGCTGCCAGAAGCCCTGAAGCTG...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTGGGCACCTGTCTGGATaGGATGTTGCTCAACGGGAG +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFIGHLSG*DVAQRE
Trigger: CTCCCGTTGAGCAACATCCCATCCAGACAGGTGCCC...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGCGGTCACCTGGGCTTTaGGGCACCTGTCTGGATGGG +
Preference number: 4 (lower is better)
Translates to: LEERDHTLGAEFFISCATRSPGL*GTCLDG
Trigger: CCCATCCAGACAGGTGCCCCAAAGCCCAGGTGACCG...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTTGTGCTACGGTCACCTaGGCTTTGGGGCACCTGTCT +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFICATVT*ALGHLS
Trigger: AGACAGGTGCCCCAAAGCCCAGGTGACCGTAGCACA...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCTCCACTCGGCCTCACTaGGCCGCCCAGGCACAATAT +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCSTRPH*AAQAQY
Trigger: ATATTGTGCCTGGGCGGCTCAGTGAGGCCGAGTGGA...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTAACGGGCACTGAACCCTaGGCCCAGGAGTCCGTCGTG +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLTGTEP*AQESVV
Trigger: CACGACGGACTCCTGGGCTCAGGGTTCAGTGCCCGT...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTAGAGGAGGGGCCGACGTaGCTCTCAGCTGCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLEEGPT*LSAAEK
Trigger: CTTCTCCGCAGCTGAGAGTCACGTCGGCCCCTCCTC...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTAGCAGGGCACCCCCTCTaGCCTGAGTTCCAGCCGATC +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLAGHPL*PEFQPI
Trigger: GATCGGCTGGAACTCAGGTCAGAGGGGGTGCCCTGC...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGTCCAAGGGGCGTGTTTaGGAGTCTGGGACCAGGACC +
Preference number: 4 (lower is better)
Translates to: LEERDHTLGAEFFISCATSKGRV*ESGTRT
Trigger: GGTCCTGGTCCCAGACTCTCAAACACGCCCCTTGGA...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGTGGGAGTGGCAGCTTTaGCTCGAGGGATGGCGACGA +
Preference number: 4 (lower is better)
Translates to: LEERDHTLGAEFFISCATWEWQL*LEGWRR
Trigger: TCGTCGCCATCCCTCGAGTCAAAGCTGCCACTCCCA...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTAAACCGCTGGGCCACCTaGCACTGGGCCACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLNRWAT*HWATAW
Trigger: CCAAGCTGTGGCCCAGTGTCAGGTGGCCCAGCGGTT...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCGGGGTCCTCAGCTACTaGAGATTCTCCCTCGTCCCG +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCGVLSY*RFSLVP
Trigger: CGGGACGAGGGAGAATCTGCAGTAGCTGAGGACCCC...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTTCCCAAGATTCCATCTaGTCCTGGGAGCCTCGACCC +
Preference number: 4 (lower is better)
Translates to: AGLEERDHTLGAEFFISCSQDSI*SWEPRP
Trigger: GGGTCGAGGCTCCCAGGAGCAGATGGAATCTTGGGA...ACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTGACGTGACTCTCAGCTaGGGAGAAGGCTCCCAAGAT +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFIDVTLS*GEGSQD
Trigger: ATCTTGGGAGCCTTCTCCGCAGCTGAGAGTCACGTC...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGGTTTCACGGCCGCCTTaGGGCGCATCCTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLVSRPP*GASCGG
Trigger: ACCACCACAGGATGCGCCGCAAGGCGGCCGTGAAAC...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGAGTGGGGAACAGGAGTaGGGGGCCCGAGTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLSGEQE*GARVQV
Trigger: GACTTGGACTCGGGCCCCGCACTCCTGTTCCCCACT...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCTGCTCCGGTTCCACATaGTCACACCAGGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCCSGST*SHQGPA
Trigger: AGCTGGCCCCTGGTGTGAGCATGTGGAACCGGAGCA...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGGCACTTTTTCCGCCTTaGACCGGGTCACCCCGCGGT +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLALFPP*TGSPRG
Trigger: ACCGCGGGGTGACCCGGTCCAAGGCGGAAAAAGTGC...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCCGTCCTCACCCCATGTaGGGTCCTCAGCTACTGCAG +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCRPHPM*GPQLLQ
Trigger: CTGCAGTAGCTGAGGACCCCACATGGGGTGAGGACG...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCCCAGGGTCTTCGCCTTaGAAGTTCTCCAGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCPGSSP*KFSRPS
Trigger: GGAGGGCCTGGAGAACTTCCAAGGCGAAGACCCTGG...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290390.9
ENST00000612891.4
CDS-3UTR CCA 90 bp GCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGATTCCATCTGCTCCTaGGAGCCTCGACCCATCCAC +
Preference number: 4 (lower is better)
Translates to: AGLEERDHTLGAEFFISCDSICS*EPRPIH
Trigger: GTGGATGGGTCGAGGCTCCCAGGAGCAGATGGAATC...ACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGAGAGGCCTCTAGACTaGCCGTCCGCTTCCTCTACA +
Preference number: 4 (lower is better)
Translates to: AGLEERDHTLGAEFFISCERPLD*PSASST
Trigger: TGTAGAGGAAGCGGACGGCCAGTCTAGAGGCCTCTC...ACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCTTGAGGCCTGGGGGCTaGCTACCAGGTACGGATCCA +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCLRPGG*LPGTDP
Trigger: TGGATCCGTACCTGGTAGCCAGCCCCCAGGCCTCAA...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACGCATCCTGTGGTGGTaGGCGCTCAGCCGCACATCC +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLRILWW*ALSRTS
Trigger: GGATGTGCGGCTGAGCGCCCACCACCACAGGATGCG...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCGTGTTTGAGAGTCTaGGACCAGGACCTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: AGLEERDHTLGAEFFISCACLRV*DQDLSQ
Trigger: CTGGCTGAGGTCCTGGTCCCAGACTCTCAAACACGC...ACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTACATCACCTGGGAAGTaGCTTCAAGGACCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: AGLEERDHTLGAEFFISCTSPGK*LQGPGV
Trigger: CACCCCCGGTCCTTGAAGCCACTTCCCAGGTGATGT...ACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTGAGCTGAGCAACACCTaGGTGCTCCGGTTCCACATG +
Preference number: 4 (lower is better)
Translates to: GLEERDHTLGAEFFISCAELSNT*VLRFHM
Trigger: CATGTGGAACCGGAGCACCCAGGTGTTGCTCAGCTC...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTGAGTGTACTTCGCCTTaGAAGTTCTCCAGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFIECTSP*KFSRPS
Trigger: GGAGGGCCTGGAGAACTTCCAAGGCGAAGTACACTC...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640868.1
CDS-3UTR TCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACCGGGCCCTGCCTCCTaGAACAGCTCTGATGTGGGA +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLPGPAS*NSSDVG
Trigger: TCCCACATCAGAGCTGTTTCAGGAGGCAGGGCCCGG...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTAGCACCGGGTGTGTGGTaGGGAAGCGGATCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLAPGVW*GSGSWS
Trigger: ACTCCAGGATCCGCTTCCTCACCACACACCCGGTGC...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGAGATGGAGGTTGCAGTaGGCAGAGACTGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: LEERDHTLGAEFFISCATRWRLQ*AETAPL
Trigger: CAGTGGCGCAGTCTCTGCTCACTGCAACCTCCATCT...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640868.1
CDS-3UTR GCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTAGGAGTCCGTCGTGCATaGCGAAGGCTCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLGVRRA*RRLLVL
Trigger: GAGGACGAGGAGCCTTCGGCATGCACGACGGACTCC...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACCCAGGAGTCCGTCGTaGATGCCGAAGGCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLPRSPS*MPKAPR
Trigger: ACGAGGAGCCTTCGGCATGCACGACGGACTCCTGGG...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCTCCCAAGATTCCATCTaGTCCTGGGAGCCTCGACCC +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCSQDSI*SWEPRP
Trigger: GGGTCGAGGCTCCCAGGAGCAGATGGAATCTTGGGA...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTAGTCACGGAAAGGAATaGCTGGCCGGAGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: GLEERDHTLGAEFFISCASHGKE*LAGEGR
Trigger: TCTTCCCTCTCCGGCCAGGCATTCCTTTCCGTGACT...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGTGCTCCGGTTCCACATaGTCACACCAGGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLCSGST*SHQGPA
Trigger: AGCTGGCCCCTGGTGTGAGCATGTGGAACCGGAGCA...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTCGGACCTGCCTCTCCTaGCTCTGTGAGAACAAAACA +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFIRTCLS*LCENKT
Trigger: TGTTTTGTTCTCACAGAGGCAGGAGAGGCAGGTCCG...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640868.1
CDS-3UTR CCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTAGCACTTTTTCCGCCTTaGACCGGGTCACCCCGCGGT +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLALFPP*TGSPRG
Trigger: ACCGCGGGGTGACCCGGTCCAAGGCGGAAAAAGTGC...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCATGGCCTCCCGGGCCTaGCTGATGGTGAATGGAATG +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCMASRA*LMVNGM
Trigger: CATTCCATTCACCATCAGCCAGGCCCGGGAGGCCAT...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCGTCCTCACCCCATGTaGGGTCCTCAGCTACTGCAG +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLRPHPM*GPQLLQ
Trigger: CTGCAGTAGCTGAGGACCCCACATGGGGTGAGGACG...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCGATTCCATCTGCTCCTaGGAGCCTCGACCCATCCAC +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCDSICS*EPRPIH
Trigger: GTGGATGGGTCGAGGCTCCCAGGAGCAGATGGAATC...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGTTGAGGCCTGGGGGCTaGCTACCAGGTACGGATCCA +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLLRPGG*LPGTDP
Trigger: TGGATCCGTACCTGGTAGCCAGCCCCCAGGCCTCAA...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCGCGTGTTTGAGAGTCTaGGACCAGGACCTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCACLRV*DQDLSQ
Trigger: CTGGCTGAGGTCCTGGTCCCAGACTCTCAAACACGC...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCACGGAAAGGAATGCCTaGCCGGAGAGGGAAGAACGC +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCTERNA*PEREER
Trigger: GCGTTCTTCCCTCTCCGGCCAGGCATTCCTTTCCGT...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCACATCACCTGGGAAGTaGCTTCAAGGACCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCTSPGK*LQGPGV
Trigger: CACCCCCGGTCCTTGAAGCCACTTCCCAGGTGATGT...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGGCTTCCACATCACCTaGGAAGTGGCTTCAAGGACC +
Preference number: 4 (lower is better)
Translates to: AGLEERDHTLGAEFFISCGFHIT*EVASRT
Trigger: GGTCCTTGAAGCCACTTCCCAGGTGATGTGGAAGCC...ACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGCAGCTTCAGGGCTTCTaGCAGCAACACGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LEERDHTLGAEFFISCATQLQGF*QQHGLP
Trigger: TGGAAGCCCGTGTTGCTGCCAGAAGCCCTGAAGCTG...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCCAGCTTCAGGGCTTCTaGCAGCAACACGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCQLQGF*QQHGLP
Trigger: TGGAAGCCCGTGTTGCTGCCAGAAGCCCTGAAGCTG...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCGGGCACCTGTCTGGATaGGATGTTGCTCAACGGGAG +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCGHLSG*DVAQRE
Trigger: CTCCCGTTGAGCAACATCCCATCCAGACAGGTGCCC...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTTTTGGGGCACCTGTCTaGATGGGATGTTGCTCAACG +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFIFGAPV*MGCCST
Trigger: CGTTGAGCAACATCCCATCCAGACAGGTGCCCCAAA...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGTGTGCTACGGTCACCTaGGCTTTGGGGCACCTGTCT +
Preference number: 4 (lower is better)
Translates to: LEERDHTLGAEFFISCATCATVT*ALGHLS
Trigger: AGACAGGTGCCCCAAAGCCCAGGTGACCGTAGCACA...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTCTGGCTGATGGTGAATaGAATGCACTGCGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: GLEERDHTLGAEFFISCALADGE*NALRRR
Trigger: TCGCCTCCGCAGTGCATTCCATTCACCATCAGCCAG...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640868.1
CDS-3UTR GCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGTCCCAAGATTCCATCTaGTCCTGGGAGCCTCGACCC +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLSQDSI*SWEPRP
Trigger: GGGTCGAGGCTCCCAGGAGCAGATGGAATCTTGGGA...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGGACGTGACTCTCAGCTaGGGAGAAGGCTCCCAAGAT +
Preference number: 4 (lower is better)
Translates to: LEERDHTLGAEFFISCATDVTLS*GEGSQD
Trigger: ATCTTGGGAGCCTTCTCCGCAGCTGAGAGTCACGTC...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTCGTCCAGTTGAGGCATaGAACAGTAGAGGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: EAAGLEERDHTLGAEFFIRPVEA*NSRGLP
Trigger: TGGAAGACCTCTACTGTTGCATGCCTCAACTGGACG...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCAGTCACGGAAAGGAATaGCTGGCCGGAGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCSHGKE*LAGEGR
Trigger: TCTTCCCTCTCCGGCCAGGCATTCCTTTCCGTGACT...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTATGCTCCGGTTCCACATaGTCACACCAGGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLCSGST*SHQGPA
Trigger: AGCTGGCCCCTGGTGTGAGCATGTGGAACCGGAGCA...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTGTGAATGGAATGCACTaGGGAGGCGAGAGAGGATCT +
Preference number: 4 (lower is better)
Translates to: GLEERDHTLGAEFFISCAVNGMH*GGERGS
Trigger: AGATCCTCTCTCGCCTCCGCAGTGCATTCCATTCAC...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640868.1
CDS-3UTR CCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACGTCCTCACCCCATGTaGGGTCCTCAGCTACTGCAG +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLRPHPM*GPQLLQ
Trigger: CTGCAGTAGCTGAGGACCCCACATGGGGTGAGGACG...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGGATTCCATCTGCTCCTaGGAGCCTCGACCCATCCAC +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLDSICS*EPRPIH
Trigger: GTGGATGGGTCGAGGCTCCCAGGAGCAGATGGAATC...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGGAGAGGCCTCTAGACTaGCCGTCCGCTTCCTCTACA +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLERPLD*PSASST
Trigger: TGTAGAGGAAGCGGACGGCCAGTCTAGAGGCCTCTC...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGTCCTCCACCGACAGTTaGAAGCTCGCGCTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLSSTDS*KLALKD
Trigger: GTCCTTGAGCGCGAGCTTCCAACTGTCGGTGGAGGA...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTATTGAGGCCTGGGGGCTaGCTACCAGGTACGGATCCA +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLLRPGG*LPGTDP
Trigger: TGGATCCGTACCTGGTAGCCAGCCCCCAGGCCTCAA...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCTCTTCCAACGACAAATaGAAGCCGAGGGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCSSNDK*KPRGCP
Trigger: GGGACACCCCCTCGGCTTCCATTTGTCGTTGGAAGA...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGGAGCTGAGCAACACCTaGGTGCTCCGGTTCCACATG +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLELSNT*VLRFHM
Trigger: CATGTGGAACCGGAGCACCCAGGTGTTGCTCAGCTC...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTCCTCTCCTGCCTCTGTaGGAACAAAACATGGCAATC +
Preference number: 4 (lower is better)
Translates to: GLEERDHTLGAEFFISCAPLLPL*EQNMAI
Trigger: GATTGCCATGTTTTGTTCTCACAGAGGCAGGAGAGG...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640868.1
CDS-3UTR TCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGAATGCACTCGGGCAGTaGGATGTCGGAAAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLNALGQ*DVGKGR
Trigger: TCTCCCCTTTCCGACATCTCACTGCCCGAGTGCATT...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640868.1
CDS-3UTR GCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGAGTCACGGAAAGGAATaGCTGGCCGGAGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLSHGKE*LAGEGR
Trigger: TCTTCCCTCTCCGGCCAGGCATTCCTTTCCGTGACT...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGAGGGTCCTGGGGAAATaGACTCGGGCAGTGAGATGT +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLRVLGK*TRAVRC
Trigger: ACATCTCACTGCCCGAGTGCATTTCCCCAGGACCCT...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640868.1
CDS-3UTR CCA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGTGCCTCTCCTGCCTCTaGACAATAGGTGACTGCATC +
Preference number: 4 (lower is better)
Translates to: LEERDHTLGAEFFISCATCLSCL*TIGDCI
Trigger: GATGCAGTCACCTATTGTCCAGAGGCAGGAGAGGCA...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290390.9
CDS-3UTR CCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTAATGGCCTCCCGGGCCTaGCTGATGGTGAATGGAATG +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLMASRA*LMVNGM
Trigger: CATTCCATTCACCATCAGCCAGGCCCGGGAGGCCAT...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTAGAGAGGCCTCTAGACTaGCCGTCCGCTTCCTCTACA +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLERPLD*PSASST
Trigger: TGTAGAGGAAGCGGACGGCCAGTCTAGAGGCCTCTC...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTATCCTCCACCGACAGTTaGAAGCTCGCGCTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLSSTDS*KLALKD
Trigger: GTCCTTGAGCGCGAGCTTCCAACTGTCGGTGGAGGA...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGTCTTCCAACGACAAATaGAAGCCGAGGGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLSSNDK*KPRGCP
Trigger: GGGACACCCCCTCGGCTTCCATTTGTCGTTGGAAGA...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTAGCGTGTTTGAGAGTCTaGGACCAGGACCTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLACLRV*DQDLSQ
Trigger: CTGGCTGAGGTCCTGGTCCCAGACTCTCAAACACGC...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTAACGGAAAGGAATGCCTaGCCGGAGAGGGAAGAACGC +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLTERNA*PEREER
Trigger: GCGTTCTTCCCTCTCCGGCCAGGCATTCCTTTCCGT...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCGGCCTAAATTTAAAGTaGGGAACAGGAGTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCGLNLK*GTGVRG
Trigger: GCCCCGCACTCCTGTTCCCCACTTTAAATTTAGGCC...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTAACATCACCTGGGAAGTaGCTTCAAGGACCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLTSPGK*LQGPGV
Trigger: CACCCCCGGTCCTTGAAGCCACTTCCCAGGTGATGT...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGGGCTTCCACATCACCTaGGAAGTGGCTTCAAGGACC +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLGFHIT*EVASRT
Trigger: GGTCCTTGAAGCCACTTCCCAGGTGATGTGGAAGCC...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCTTTGGGGCACCTGTCTaGATGGGATGTTGCTCAACG +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCFGAPV*MGCCST
Trigger: CGTTGAGCAACATCCCATCCAGACAGGTGCCCCAAA...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTTCAGGTGTTTATTTCTaGCTAGCAGAGGGAGGGACC +
Preference number: 4 (lower is better)
Translates to: GLEERDHTLGAEFFISCASGVYF*LAEGGT
Trigger: GGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGA...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTAGACGTGACTCTCAGCTaGGGAGAAGGCTCCCAAGAT +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLDVTLS*GEGSQD
Trigger: ATCTTGGGAGCCTTCTCCGCAGCTGAGAGTCACGTC...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGCGTCCAGTTGAGGCATaGAACAGTAGAGGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LEERDHTLGAEFFISCATRPVEA*NSRGLP
Trigger: TGGAAGACCTCTACTGTTGCATGCCTCAACTGGACG...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR GCA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTCAACGGGAGGAAAGGTaGTACCTTCTTTGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: GLEERDHTLGAEFFISCAQREER*YLLCPL
Trigger: AAGAGGACAAAGAAGGTAGCACCTTTCCTCCCGTTG...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGGGCCTAAATTTAAAGTaGGGAACAGGAGTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLGLNLK*GTGVRG
Trigger: GCCCCGCACTCCTGTTCCCCACTTTAAATTTAGGCC...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTAGGCTTCCACATCACCTaGGAAGTGGCTTCAAGGACC +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLGFHIT*EVASRT
Trigger: GGTCCTTGAAGCCACTTCCCAGGTGATGTGGAAGCC...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTAGCGTGACCACACTTTaGGGGCTGAGTTCTTCATTA +
Preference number: 4 (lower is better)
Translates to: GLEERDHTLGAEFFISCASVTTL*GLSSSL
Trigger: TAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCT...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCAGGAAAAGGGCCAATTaGCGAAGAGCCTACTATGTG +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCRKRAN*RRAYYV
Trigger: CACATAGTAGGCTCTTCGTCAATTGGCCCTTTTCCT...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640868.1
CDS-3UTR GCA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCCAACGGGAGGAAAGGTaGTACCTTCTTTGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCQREER*YLLCPL
Trigger: AAGAGGACAAAGAAGGTAGCACCTTTCCTCCCGTTG...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCTGGCTGATGGTGAATaGAATGCACTGCTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLLADGE*NALLSQ
Trigger: CTGACTCAGCAGTGCATTCCATTCACCATCAGCCAG...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290390.9
ENST00000612891.4
CDS-3UTR CCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTAGGCCTAAATTTAAAGTaGGGAACAGGAGTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLGLNLK*GTGVRG
Trigger: GCCCCGCACTCCTGTTCCCCACTTTAAATTTAGGCC...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGGCTGATGGTGAATaGAATGCACTGCTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLLADGE*NALLSQ
Trigger: CTGACTCAGCAGTGCATTCCATTCACCATCAGCCAG...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290390.9
ENST00000612891.4
CDS-3UTR CCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTATCAGGTGTTTATTTCTaGCTAGCAGAGGGAGGGACC +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLSGVYF*LAEGGT
Trigger: GGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGA...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR TCA 90 bp GCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTCCCACTAACCACAATTaGCAGATAAAGAAACTGAAG +
Preference number: 4 (lower is better)
Translates to: AGLEERDHTLGAEFFISCPTNHN*QIKKLK
Trigger: CTTCAGTTTCTTTATCTGTCAATTGTGGTTAGTGGG...ACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640868.1
CDS-3UTR GCA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACAACGGGAGGAAAGGTaGTACCTTCTTTGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLQREER*YLLCPL
Trigger: AAGAGGACAAAGAAGGTAGCACCTTTCCTCCCGTTG...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS GCA 90 bp TGGTGGTGGGCGCTCAGCCGCACATCCGAGTGCCCGGCCCGCTGCTaGTGGCAGGACGCGGAGGGGCGGGTGGCGCCGCCCACAGAGGGG +
Preference number: 5 (lower is better)
Translates to: WWWALSRTSECPARC*WQDAEGRVAPPTEG
Trigger: CCCCTCTGTGGGCGGCGCCACCCGCCCCTCCGCGTCCTGCCAGCAGCAGCGGGCCGGGCACTCGGATGTGCGGCTGAGCGCCCACCACCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS GCA 90 bp CTGTGGTGGTGGGCGCTCAGCCGCACATCCGAGTGCCCGGCCCGCTaGTGCTGGCAGGACGCGGAGGGGCGGGTGGCGCCGCCCACAGAG +
Preference number: 5 (lower is better)
Translates to: LWWWALSRTSECPAR*CWQDAEGRVAPPTE
Trigger: CTCTGTGGGCGGCGCCACCCGCCCCTCCGCGTCCTGCCAGCAGCAGCGGGCCGGGCACTCGGATGTGCGGCTGAGCGCCCACCACCACAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 90 bp CCGAGTGCCCGGCCCGCTGCTGCTGGCAGGACGCGGAGGGGCGGGTaGCGCCGCCCACAGAGGGGTAGGACACCAACACGCCCGAGGCGA +
Preference number: 5 (lower is better)
Translates to: PSARPAAAGRTRRGG*RRPQRGRTPTRPRR
Trigger: TCGCCTCGGGCGTGTTGGTGTCCTACCCCTCTGTGGGCGGCGCCACCCGCCCCTCCGCGTCCTGCCAGCAGCAGCGGGCCGGGCACTCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS GCA 90 bp TTGCGGCGCATCCTGTGGTGGTGGGCGCTCAGCCGCACATCCGAGTaGCCGGCCCGCTGCTGCTGGCAGGACGCGGAGGGGCGGGTGGCG +
Preference number: 5 (lower is better)
Translates to: LRRILWWWALSRTSE*PARCCWQDAEGRVA
Trigger: CGCCACCCGCCCCTCCGCGTCCTGCCAGCAGCAGCGGGCCGGGCACTCGGATGTGCGGCTGAGCGCCCACCACCACAGGATGCGCCGCAA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 90 bp GGGTCCAGGCGTTTCACGGCCGCCTTGCGGCGCATCCTGTGGTGGTaGGCGCTCAGCCGCACATCCGAGTGCCCGGCCCGCTGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GSRRFTAALRRILWW*ALSRTSECPARCCW
Trigger: CCAGCAGCAGCGGGCCGGGCACTCGGATGTGCGGCTGAGCGCCCACCACCACAGGATGCGCCGCAAGGCGGCCGTGAAACGCCTGGACCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 90 bp GCAGGGTCCAGGCGTTTCACGGCCGCCTTGCGGCGCATCCTGTGGTaGTGGGCGCTCAGCCGCACATCCGAGTGCCCGGCCCGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: AGSRRFTAALRRILW*WALSRTSECPARCC
Trigger: GCAGCAGCGGGCCGGGCACTCGGATGTGCGGCTGAGCGCCCACCACCACAGGATGCGCCGCAAGGCGGCCGTGAAACGCCTGGACCCTGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 90 bp CTCGCAGGGTCCAGGCGTTTCACGGCCGCCTTGCGGCGCATCCTGTaGTGGTGGGCGCTCAGCCGCACATCCGAGTGCCCGGCCCGCTGC +
Preference number: 5 (lower is better)
Translates to: LAGSRRFTAALRRIL*WWALSRTSECPARC
Trigger: GCAGCGGGCCGGGCACTCGGATGTGCGGCTGAGCGCCCACCACCACAGGATGCGCCGCAAGGCGGCCGTGAAACGCCTGGACCCTGCGAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 90 bp CCACCTGCGGCACTGGCACAGTGGGCGGCCGCACTTTTTCCGCCTTaGACCGGGTCACCCCGCGGTCTCGGACCTGCCTCTCCTGCCTCG +
Preference number: 5 (lower is better)
Translates to: PPAALAQWAAALFPP*TGSPRGLGPASPAS
Trigger: CGAGGCAGGAGAGGCAGGTCCGAGACCGCGGGGTGACCCGGTCCAAGGCGGAAAAAGTGCGGCCGCCCACTGTGCCAGTGCCGCAGGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000638555.1
ENST00000640331.1
ENST00000684111.1
CDS GCA 90 bp GGGTGTGGTTCGAGGCCATCTGCCAGGATCCTGGCCCTCCCTGTCTaGCAGCTCCAGACCCTGTGGAGGCACGCGGGTCCGGCCAGCCCA +
Preference number: 5 (lower is better)
Translates to: GCGSRPSARILALPV*QLQTLWRHAGPASP
Trigger: TGGGCTGGCCGGACCCGCGTGCCTCCACAGGGTCTGGAGCTGGCAGACAGGGAGGGCCAGGATCCTGGCAGATGGCCTCGAACCACACCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 90 bp CCACCTGCGGCACTGGCACAGTGGGCGGCCGCACTTTTTCCGCCTTaGACCGGGTCACCCCGCGGTCTCGGACCTGCCTCTCCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: PPAALAQWAAALFPP*TGSPRGLGPASPAS
Trigger: AGAGGCAGGAGAGGCAGGTCCGAGACCGCGGGGTGACCCGGTCCAAGGCGGAAAAAGTGCGGCCGCCCACTGTGCCAGTGCCGCAGGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000640371.1
ENST00000640868.1
CDS CCA 90 bp CCACCTGCGGCACTGGCACAGTGGGCGGCCGCACTTTTTCCGCCTTaGACCGGGTCACCCCGCGGTCTCGGACCTGCCTCGAGCCTTCGT +
Preference number: 5 (lower is better)
Translates to: PPAALAQWAAALFPP*TGSPRGLGPASSLR
Trigger: ACGAAGGCTCGAGGCAGGTCCGAGACCGCGGGGTGACCCGGTCCAAGGCGGAAAAAGTGCGGCCGCCCACTGTGCCAGTGCCGCAGGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612891.4
CDS CCA 90 bp CGCCCCCAGGGTCTTCGCCTTGGAAGTTCTCCAGGCCCTCCGAGGTaGACGCGTGCAGCACGGGCACTGAACCCTGAGCCCAGGAGTCCG +
Preference number: 5 (lower is better)
Translates to: RPQGLRLGSSPGPPR*TRAARALNPEPRSP
Trigger: CGGACTCCTGGGCTCAGGGTTCAGTGCCCGTGCTGCACGCGTCCACCTCGGAGGGCCTGGAGAACTTCCAAGGCGAAGACCCTGGGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290390.9
ENST00000612891.4
CDS TCA 90 bp TCCAGGCCCTCCGAGGTGGACGCGTGCAGCACGGGCACTGAACCCTaGGCCCAGGAGTCCGTCGTGCATGCCGAAGGCTCCTCGTCCTCA +
Preference number: 5 (lower is better)
Translates to: SRPSEVDACSTGTEP*AQESVVHAEGSSSS
Trigger: TGAGGACGAGGAGCCTTCGGCATGCACGACGGACTCCTGGGCTCAGGGTTCAGTGCCCGTGCTGCACGCGTCCACCTCGGAGGGCCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640331.1
ENST00000640371.1
ENST00000640868.1
ENST00000684111.1
CDS CCA 90 bp GAACAGGAGTGCGGGGCCCGAGTCCAAGTCACGGAAAGGAATGCCTaGCCGGAGAGGGAAGAACGCTGCCGGGGAGACACGGGTGCCGGG +
Preference number: 5 (lower is better)
Translates to: EQECGARVQVTERNA*PEREERCRGDTGAG
Trigger: CCCGGCACCCGTGTCTCCCCGGCAGCGTTCTTCCCTCTCCGGCCAGGCATTCCTTTCCGTGACTTGGACTCGGGCCCCGCACTCCTGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS TCA 90 bp GAAGTTCTCCAGGCCCTCCGAGGTGGACGCGTGCAGCACGGGCACTaGACCCTGAGCCCAGGAGTCCGTCGTGCATGCCGAAGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: EVLQALRGGRVQHGH*TLSPGVRRACRRLL
Trigger: GAGGAGCCTTCGGCATGCACGACGGACTCCTGGGCTCAGGGTTCAGTGCCCGTGCTGCACGCGTCCACCTCGGAGGGCCTGGAGAACTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640331.1
ENST00000640371.1
ENST00000640868.1
ENST00000684111.1
CDS GCA 90 bp ACGCGTGCAGCACGGGCACTGAACCCTGAGCCCAGGAGTCCGTCGTaGATGCCGAAGGCTCCTCGTCCTCACCCCATGTGGGGTCCTCAG +
Preference number: 5 (lower is better)
Translates to: TRAARALNPEPRSPS*MPKAPRPHPMWGPQ
Trigger: CTGAGGACCCCACATGGGGTGAGGACGAGGAGCCTTCGGCATGCACGACGGACTCCTGGGCTCAGGGTTCAGTGCCCGTGCTGCACGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640331.1
ENST00000640371.1
ENST00000640868.1
ENST00000684111.1
CDS GCA 90 bp TGCAGCATGGCCTCCCGGGCCTGGCTGATGGTGAATGGAATGCACTaGGGAGGCGAGAGAGGATCTCAGGTCGGCAGGGAGGGGCGGGAG +
Preference number: 5 (lower is better)
Translates to: CSMASRAWLMVNGMH*GGERGSQVGREGRE
Trigger: CTCCCGCCCCTCCCTGCCGACCTGAGATCCTCTCTCGCCTCCGCAGTGCATTCCATTCACCATCAGCCAGGCCCGGGAGGCCATGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640331.1
ENST00000640868.1
CDS CCA 90 bp CTCGGCCTCACTGAGCCGCCCAGGCACAATATCCACCTGCGGCACTaGCACAGTGGGCGGCCGCACTTTTTCCGCCTTGGACCGGGTCAC +
Preference number: 5 (lower is better)
Translates to: LGLTEPPRHNIHLRH*HSGRPHFFRLGPGH
Trigger: GTGACCCGGTCCAAGGCGGAAAAAGTGCGGCCGCCCACTGTGCCAGTGCCGCAGGTGGATATTGTGCCTGGGCGGCTCAGTGAGGCCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000638555.1
ENST00000640331.1
ENST00000640371.1
ENST00000640868.1
ENST00000684111.1
CDS CCA 90 bp AGAGAAGGGTCGGCATCGTCGGCAGGCGCCTCCTCCACCGACAGTTaGAAGCTCGCGCTCAAGGACCCGGCCGAGGAGAGGCCTCTAGAC +
Preference number: 5 (lower is better)
Translates to: REGSASSAGASSTDS*KLALKDPAEERPLD
Trigger: GTCTAGAGGCCTCTCCTCGGCCGGGTCCTTGAGCGCGAGCTTCCAACTGTCGGTGGAGGAGGCGCCTGCCGACGATGCCGACCCTTCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS TCA 90 bp GACTGGCCGTCCGCTTCCTCTACAGGACCTCCGGGCCCTGCCTCCTaGAACAGCTCTGATGTGGGAGGAGGGGCCGACGTGACTCTCAGC +
Preference number: 5 (lower is better)
Translates to: DWPSASSTGPPGPAS*NSSDVGGGADVTLS
Trigger: GCTGAGAGTCACGTCGGCCCCTCCTCCCACATCAGAGCTGTTTCAGGAGGCAGGGCCCGGAGGTCCTGTAGAGGAAGCGGACGGCCAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640331.1
ENST00000640868.1
ENST00000684111.1
CDS TCA 90 bp AGGACACCAACACGCCCGAGGCGATGCAGGGCACCCCCTCTGACCTaGGTTCCAGCCGATCCCCAGCCGCGTCCAGTTGAGGCATGCAAC +
Preference number: 5 (lower is better)
Translates to: RTPTRPRRCRAPPLT*VPADPQPRPVEACN
Trigger: GTTGCATGCCTCAACTGGACGCGGCTGGGGATCGGCTGGAACTCAGGTCAGAGGGGGTGCCCTGCATCGCCTCGGGCGTGTTGGTGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS GCA 90 bp GCCATCCACTCGGCCTCACTGAGCCGCCCAGGCACAATATCCACCTaGGGCACTGGCACAGTGGGCGGCCGCACTTTTTCCGCCTTGGAC +
Preference number: 5 (lower is better)
Translates to: AIHSASLSRPGTIST*GTGTVGGRTFSALD
Trigger: GTCCAAGGCGGAAAAAGTGCGGCCGCCCACTGTGCCAGTGCCGCAGGTGGATATTGTGCCTGGGCGGCTCAGTGAGGCCGAGTGGATGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000638555.1
ENST00000640331.1
ENST00000640371.1
ENST00000640868.1
ENST00000684111.1
CDS TCA 90 bp CGCTTCCTCTACAGGACCTCCGGGCCCTGCCTCCTGAAACAGCTCTaGTGTGGGAGGAGGGGCCGACGTGACTCTCAGCTGCGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: RFLYRTSGPCLLKQL*CGRRGRRDSQLRRR
Trigger: CCTTCTCCGCAGCTGAGAGTCACGTCGGCCCCTCCTCCCACATCAGAGCTGTTTCAGGAGGCAGGGCCCGGAGGTCCTGTAGAGGAAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640331.1
ENST00000640868.1
ENST00000684111.1
CDS GCA 90 bp GCAGATTCTCCCTCGTCCCGGGCCAGGAAGCGCCACTCGGTGATCTaGAGCATGGCCTCCCGGGCCTGGCTGATGGTGAATGGAATGCAC +
Preference number: 5 (lower is better)
Translates to: ADSPSSRARKRHSVI*SMASRAWLMVNGMH
Trigger: GTGCATTCCATTCACCATCAGCCAGGCCCGGGAGGCCATGCTGCAGATCACCGAGTGGCGCTTCCTGGCCCGGGACGAGGGAGAATCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640331.1
ENST00000640371.1
ENST00000640868.1
ENST00000684111.1
CDS GCA 90 bp TGCCGAAGGCTCCTCGTCCTCACCCCATGTGGGGTCCTCAGCTACTaGAGATTCTCCCTCGTCCCGGGCCAGGAAGCGCCACTCGGTGAT +
Preference number: 5 (lower is better)
Translates to: CRRLLVLTPCGVLSY*RFSLVPGQEAPLGD
Trigger: ATCACCGAGTGGCGCTTCCTGGCCCGGGACGAGGGAGAATCTGCAGTAGCTGAGGACCCCACATGGGGTGAGGACGAGGAGCCTTCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640331.1
ENST00000640371.1
ENST00000640868.1
ENST00000684111.1
CDS CCA 90 bp CTGAGGAGTGTACTTCGCCTTGGAAGTTCTCCAGGCCCTCCGAGGTaGACGCGTGCAGCACGGGCACTGAACCCTGAGCCCAGGAGTCCG +
Preference number: 5 (lower is better)
Translates to: LRSVLRLGSSPGPPR*TRAARALNPEPRSP
Trigger: CGGACTCCTGGGCTCAGGGTTCAGTGCCCGTGCTGCACGCGTCCACCTCGGAGGGCCTGGAGAACTTCCAAGGCGAAGTACACTCCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000640331.1
ENST00000640371.1
ENST00000640868.1
ENST00000684111.1
CDS CCA 90 bp ATGGCAGAGGAGTCCGGAGAGGCTCCTGAGGAGTGTACTTCGCCTTaGAAGTTCTCCAGGCCCTCCGAGGTGGACGCGTGCAGCACGGGC +
Preference number: 5 (lower is better)
Translates to: MAEESGEAPEECTSP*KFSRPSEVDACSTG
Trigger: GCCCGTGCTGCACGCGTCCACCTCGGAGGGCCTGGAGAACTTCCAAGGCGAAGTACACTCCTCAGGAGCCTCTCCGGACTCCTCTGCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000640331.1
ENST00000640371.1
ENST00000640868.1
ENST00000684111.1
CDS CCA 90 bp GCCAGGAAGCGCCACTCGGTGATCTGCAGCATGGCCTCCCGGGCCTaGCTGATGGTGAATGGAATGCACTGCGGAGGCGAGAGAGGATCT +
Preference number: 5 (lower is better)
Translates to: ARKRHSVICSMASRA*LMVNGMHCGGERGS
Trigger: AGATCCTCTCTCGCCTCCGCAGTGCATTCCATTCACCATCAGCCAGGCCCGGGAGGCCATGCTGCAGATCACCGAGTGGCGCTTCCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640331.1
ENST00000640868.1
CDS-3UTR CAA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTGGTTCGGCCCGGGCCTaGGTCTTCTCGCCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: EAAGLEERDHTLGAEFFIGSARA*VFSPRW
Trigger: CCAGCGGGGCGAGAAGACCAAGGCCCGGGCCGAACC...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTACACTGGGCCACAGCTaGGGGCTGCGGCTGCGGGCC +
Preference number: 5 (lower is better)
Translates to: EAAGLEERDHTLGAEFFITLGHS*GLRLRA
Trigger: GGCCCGCAGCCGCAGCCCCAAGCTGTGGCCCAGTGT...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS CCA 90 bp GCCAGCTTCAGGGCTTCTGGCAGCAACACGGGCTTCCACATCACCTaGGAAGTGGCTTCAAGGACCGGGGGTGTGGTTCGAGGCCATCTG +
Preference number: 5 (lower is better)
Translates to: ASFRASGSNTGFHIT*EVASRTGGVVRGHL
Trigger: CAGATGGCCTCGAACCACACCCCCGGTCCTTGAAGCCACTTCCCAGGTGATGTGGAAGCCCGTGTTGCTGCCAGAAGCCCTGAAGCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS-3UTR CAA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTGGTTCGGCCCGGGCCTaGGTCTTCTCGCCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: GLEERDHTLGAEFFISCAGSARA*VFSPRW
Trigger: CCAGCGGGGCGAGAAGACCAAGGCCCGGGCCGAACC...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS TCA 90 bp GCCCTGCCTCCTGAAACAGCTCTGATGTGGGAGGAGGGGCCGACGTaGCTCTCAGCTGCGGAGAAGGCTCCCAAGATTCCATCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: ALPPETALMWEEGPT*LSAAEKAPKIPSAP
Trigger: AGGAGCAGATGGAATCTTGGGAGCCTTCTCCGCAGCTGAGAGTCACGTCGGCCCCTCCTCCCACATCAGAGCTGTTTCAGGAGGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640331.1
ENST00000640868.1
ENST00000684111.1
CDS CCA 90 bp TCAGGGCTTCTGGCAGCAACACGGGCTTCCACATCACCTGGGAAGTaGCTTCAAGGACCGGGGGTGTGGTTCGAGGCCATCTGCCAGGAT +
Preference number: 5 (lower is better)
Translates to: SGLLAATRASTSPGK*LQGPGVWFEAICQD
Trigger: ATCCTGGCAGATGGCCTCGAACCACACCCCCGGTCCTTGAAGCCACTTCCCAGGTGATGTGGAAGCCCGTGTTGCTGCCAGAAGCCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 90 bp GCTCCGGTTCCACATGCTCACACCAGGGGCCAGCTTCAGGGCTTCTaGCAGCAACACGGGCTTCCACATCACCTGGGAAGTGGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: APVPHAHTRGQLQGF*QQHGLPHHLGSGFK
Trigger: CTTGAAGCCACTTCCCAGGTGATGTGGAAGCCCGTGTTGCTGCCAGAAGCCCTGAAGCTGGCCCCTGGTGTGAGCATGTGGAACCGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS-3UTR CAA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTCGTTTCACGGCCGCCTaGCGGCGCATCCTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: EAAGLEERDHTLGAEFFIRFTAA*RRILWW
Trigger: CCACCACAGGATGCGCCGCAAGGCGGCCGTGAAACG...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCACACTGGGCCACAGCTaGGGGCTGCGGCTGCGGGCC +
Preference number: 5 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCTLGHS*GLRLRA
Trigger: GGCCCGCAGCCGCAGCCCCAAGCTGTGGCCCAGTGT...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS GCA 90 bp GCCGACGTGACTCTCAGCTGCGGAGAAGGCTCCCAAGATTCCATCTaGTCCTGGGAGCCTCGACCCATCCACGACCTTCCTAAAGGGATC +
Preference number: 5 (lower is better)
Translates to: ADVTLSCGEGSQDSI*SWEPRPIHDLPKGI
Trigger: GATCCCTTTAGGAAGGTCGTGGATGGGTCGAGGCTCCCAGGAGCAGATGGAATCTTGGGAGCCTTCTCCGCAGCTGAGAGTCACGTCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640331.1
ENST00000640868.1
ENST00000684111.1
CDS GCA 90 bp TCCGCCTTGGACCGGGTCACCCCGCGGTCTCGGACCTGCCTCTCCTaGCTCTGTGAGAACAAAACATGGCAATCAGAGCAGGAAACCAAG +
Preference number: 5 (lower is better)
Translates to: SALDRVTPRSRTCLS*LCENKTWQSEQETK
Trigger: CTTGGTTTCCTGCTCTGATTGCCATGTTTTGTTCTCACAGAGGCAGGAGAGGCAGGTCCGAGACCGCGGGGTGACCCGGTCCAAGGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640868.1
CDS CCA 90 bp CCTTCTTTGTCCTCTTGTTCAGGCACACCAGAGCTGAGCAACACCTaGGTGCTCCGGTTCCACATGCTCACACCAGGGGCCAGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: PSLSSCSGTPELSNT*VLRFHMLTPGASFR
Trigger: CCTGAAGCTGGCCCCTGGTGTGAGCATGTGGAACCGGAGCACCCAGGTGTTGCTCAGCTCTGGTGTGCCTGAACAAGAGGACAAAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 90 bp ATGCACTCGGGCAGTGAGATGTCGGAAAGGGGAGAGCAGGAGCAATaGCAGAGGAGTCCGGAGAGGCTCCTGAGGAGTGTACTTCGCCTT +
Preference number: 5 (lower is better)
Translates to: MHSGSEMSERGEQEQ*QRSPERLLRSVLRL
Trigger: AAGGCGAAGTACACTCCTCAGGAGCCTCTCCGGACTCCTCTGCCATTGCTCCTGCTCTCCCCTTTCCGACATCTCACTGCCCGAGTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000640331.1
ENST00000640371.1
ENST00000640868.1
ENST00000684111.1
CDS-3UTR CAA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCCGCACTTTTTCCGCCTaGGACCGGGTCACCCCGCGG +
Preference number: 5 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCRTFSA*DRVTPR
Trigger: CCGCGGGGTGACCCGGTCCAAGGCGGAAAAAGTGCG...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGCGTTTCACGGCCGCCTaGCGGCGCATCCTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: LEERDHTLGAEFFISCATRFTAA*RRILWW
Trigger: CCACCACAGGATGCGCCGCAAGGCGGCCGTGAAACG...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTAGGTTCGGCCCGGGCCTaGGTCTTCTCGCCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLGSARA*VFSPRW
Trigger: CCAGCGGGGCGAGAAGACCAAGGCCCGGGCCGAACC...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCGCACTTTTTCCGCCTaGGACCGGGTCACCCCGCGG +
Preference number: 5 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLRTFSA*DRVTPR
Trigger: CCGCGGGGTGACCCGGTCCAAGGCGGAAAAAGTGCG...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGGTCACCTGGGCTTaGGGGCACCTGTCTGGATGG +
Preference number: 5 (lower is better)
Translates to: GLEERDHTLGAEFFISCATVTWA*GHLSGW
Trigger: CCATCCAGACAGGTGCCCCAAAGCCCAGGTGACCGT...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS TCA 90 bp GAAAGGTGCTACCTTCTTTGTCCTCTTGTTCAGGCACACCAGAGCTaGGCAACACCTGGGTGCTCCGGTTCCACATGCTCACACCAGGGG +
Preference number: 5 (lower is better)
Translates to: ERCYLLCPLVQAHQS*ATPGCSGSTCSHQG
Trigger: CCCCTGGTGTGAGCATGTGGAACCGGAGCACCCAGGTGTTGCTCAGCTCTGGTGTGCCTGAACAAGAGGACAAAGAAGGTAGCACCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 90 bp TGGGGGCTGAGTTCTTCATTAGCTGTGCTACGGTCACCTGGGCTTTaGGGCACCTGTCTGGATGGGATGTTGCTCAACGGGAGGAAAGGT +
Preference number: 5 (lower is better)
Translates to: WGLSSSLAVLRSPGL*GTCLDGMLLNGRKG
Trigger: ACCTTTCCTCCCGTTGAGCAACATCCCATCCAGACAGGTGCCCCAAAGCCCAGGTGACCGTAGCACAGCTAATGAAGAACTCAGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 90 bp CACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGGTCACCTaGGCTTTGGGGCACCTGTCTGGATGGGATGTTGCTCAACGGGAG +
Preference number: 5 (lower is better)
Translates to: HTLGAEFFISCATVT*ALGHLSGWDVAQRE
Trigger: CTCCCGTTGAGCAACATCCCATCCAGACAGGTGCCCCAAAGCCCAGGTGACCGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS-3UTR CAA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACGCACTTTTTCCGCCTaGGACCGGGTCACCCCGCGG +
Preference number: 5 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLRTFSA*DRVTPR
Trigger: CCGCGGGGTGACCCGGTCCAAGGCGGAAAAAGTGCG...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTCCCAGCCGCGTCCAGTaGAGGCATGCAACAGTAGAG +
Preference number: 5 (lower is better)
Translates to: GLEERDHTLGAEFFISCAPSRVQ*RHATVE
Trigger: CTCTACTGTTGCATGCCTCAACTGGACGCGGCTGGG...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp GCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTTTGGGAGTGGCAGCTTaGACTCGAGGGATGGCGACG +
Preference number: 5 (lower is better)
Translates to: AGLEERDHTLGAEFFISCLGVAA*TRGMAT
Trigger: CGTCGCCATCCCTCGAGTCAAAGCTGCCACTCCCAA...ACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTTTGGGAGTGGCAGCTTaGACTCGAGGGATGGCGACG +
Preference number: 5 (lower is better)
Translates to: GLEERDHTLGAEFFISCALGVAA*TRGMAT
Trigger: CGTCGCCATCCCTCGAGTCAAAGCTGCCACTCCCAA...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCACGGTCACCTGGGCTTaGGGGCACCTGTCTGGATGG +
Preference number: 5 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCTVTWA*GHLSGW
Trigger: CCATCCAGACAGGTGCCCCAAAGCCCAGGTGACCGT...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGACGGTCACCTGGGCTTaGGGGCACCTGTCTGGATGG +
Preference number: 5 (lower is better)
Translates to: LEERDHTLGAEFFISCATTVTWA*GHLSGW
Trigger: CCATCCAGACAGGTGCCCCAAAGCCCAGGTGACCGT...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS CCA 90 bp GCAGCTTTGACTCGAGGGATGGCGACGATAGGCCTAAATTTAAAGTaGGGAACAGGAGTGCGGGGCCCGAGTCCAAGTCACGGAAAGGAA +
Preference number: 5 (lower is better)
Translates to: AALTRGMATIGLNLK*GTGVRGPSPSHGKE
Trigger: TTCCTTTCCGTGACTTGGACTCGGGCCCCGCACTCCTGTTCCCCACTTTAAATTTAGGCCTATCGTCGCCATCCCTCGAGTCAAAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS-3UTR CAA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGCTCCTCCACCGACAGTaGGAAGCTCGCGCTCAAGGA +
Preference number: 5 (lower is better)
Translates to: LEERDHTLGAEFFISCATLLHRQ*EARAQG
Trigger: TCCTTGAGCGCGAGCTTCCAACTGTCGGTGGAGGAG...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGCCCAGCCGCGTCCAGTaGAGGCATGCAACAGTAGAG +
Preference number: 5 (lower is better)
Translates to: LEERDHTLGAEFFISCATPSRVQ*RHATVE
Trigger: CTCTACTGTTGCATGCCTCAACTGGACGCGGCTGGG...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCCCCAGCCGCGTCCAGTaGAGGCATGCAACAGTAGAG +
Preference number: 5 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCPSRVQ*RHATVE
Trigger: CTCTACTGTTGCATGCCTCAACTGGACGCGGCTGGG...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTTTCCAAGGGGCGTGTTaGAGAGTCTGGGACCAGGAC +
Preference number: 5 (lower is better)
Translates to: GLEERDHTLGAEFFISCAFQGAC*RVWDQD
Trigger: GTCCTGGTCCCAGACTCTCAAACACGCCCCTTGGAA...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS GCA 90 bp TGCTACGGTCACCTGGGCTTTGGGGCACCTGTCTGGATGGGATGTTaGTCAACGGGAGGAAAGGTGCTACCTTCTTTGTCCTCTTGTTCA +
Preference number: 5 (lower is better)
Translates to: CYGHLGFGAPVWMGC*STGGKVLPSLSSCS
Trigger: TGAACAAGAGGACAAAGAAGGTAGCACCTTTCCTCCCGTTGAGCAACATCCCATCCAGACAGGTGCCCCAAAGCCCAGGTGACCGTAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 90 bp ATTAGCTGTGCTACGGTCACCTGGGCTTTGGGGCACCTGTCTGGATaGGATGTTGCTCAACGGGAGGAAAGGTGCTACCTTCTTTGTCCT +
Preference number: 5 (lower is better)
Translates to: ISCATVTWALGHLSG*DVAQREERCYLLCP
Trigger: AGGACAAAGAAGGTAGCACCTTTCCTCCCGTTGAGCAACATCCCATCCAGACAGGTGCCCCAAAGCCCAGGTGACCGTAGCACAGCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 90 bp CCGCGGTCTCGGACCTGCCTCTCCTGCCTCTGTGAGAACAAAACATaGCAATCAGAGCAGGAAACCAAGAAGTGGAACGGAAGAGTAGCT +
Preference number: 5 (lower is better)
Translates to: PRSRTCLSCLCENKT*QSEQETKKWNGRVA
Trigger: AGCTACTCTTCCGTTCCACTTCTTGGTTTCCTGCTCTGATTGCCATGTTTTGTTCTCACAGAGGCAGGAGAGGCAGGTCCGAGACCGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640868.1
CDS-3UTR CAA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGTTCCAAGGGGCGTGTTaGAGAGTCTGGGACCAGGAC +
Preference number: 5 (lower is better)
Translates to: LEERDHTLGAEFFISCATFQGAC*RVWDQD
Trigger: GTCCTGGTCCCAGACTCTCAAACACGCCCCTTGGAA...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTCCTCCACCGACAGTaGGAAGCTCGCGCTCAAGGA +
Preference number: 5 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLLLHRQ*EARAQG
Trigger: TCCTTGAGCGCGAGCTTCCAACTGTCGGTGGAGGAG...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGTTCCAAGGGGCGTGTTaGAGAGTCTGGGACCAGGAC +
Preference number: 5 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLFQGAC*RVWDQD
Trigger: GTCCTGGTCCCAGACTCTCAAACACGCCCCTTGGAA...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTATTGGGAGTGGCAGCTTaGACTCGAGGGATGGCGACG +
Preference number: 5 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLLGVAA*TRGMAT
Trigger: CGTCGCCATCCCTCGAGTCAAAGCTGCCACTCCCAA...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGAGCGGATCCTGGAGTTaGGGAGTGGCAGCTTTGACT +
Preference number: 5 (lower is better)
Translates to: LEERDHTLGAEFFISCATSGSWS*GVAALT
Trigger: AGTCAAAGCTGCCACTCCCAAACTCCAGGATCCGCT...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp GGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTGAGCGTGACCACACTTaGGGGGCTGAGTTCTTCATT +
Preference number: 5 (lower is better)
Translates to: GLEERDHTLGAEFFISCAERDHT*GAEFFI
Trigger: AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTC...AGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGAGCGGATCCTGGAGTTaGGGAGTGGCAGCTTTGACT +
Preference number: 5 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLSGSWS*GVAALT
Trigger: AGTCAAAGCTGCCACTCCCAAACTCCAGGATCCGCT...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp GAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAAGGTGCTACCTTCTTaGTCCTCTTGTTCAGGCACA +
Preference number: 5 (lower is better)
Translates to: EAAGLEERDHTLGAEFFIKVLPS*SSCSGT
Trigger: TGTGCCTGAACAAGAGGACAAAGAAGGTAGCACCTT...AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp TTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGTGTCTGGATGGGATGTaGCTCAACGGGAGGAAAGGT +
Preference number: 5 (lower is better)
Translates to: LEERDHTLGAEFFISCATCLDGM*LNGRKG
Trigger: ACCTTTCCTCCCGTTGAGCAACATCCCATCCAGACA...CGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCGAGCGTGACCACACTTaGGGGGCTGAGTTCTTCATT +
Preference number: 5 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCERDHT*GAEFFI
Trigger: AATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTC...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTAGGAGTGTACTTCGCCTaGGAAGTTCTCCAGGCCCTC +
Preference number: 5 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLGVYFA*EVLQAL
Trigger: GAGGGCCTGGAGAACTTCCAAGGCGAAGTACACTCC...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640868.1
CDS-3UTR CAA 90 bp GCAGGCTTAGAGGAGCGTGACCACACTTTGGGGGCTGAGTTCTTCATTAGCTGTAAGGTGCTACCTTCTTaGTCCTCTTGTTCAGGCACA +
Preference number: 5 (lower is better)
Translates to: AGLEERDHTLGAEFFISCKVLPS*SSCSGT
Trigger: TGTGCCTGAACAAGAGGACAAAGAAGGTAGCACCTT...ACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGTGTCTGGATGGGATGTaGCTCAACGGGAGGAAAGGT +
Preference number: 5 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLCLDGM*LNGRKG
Trigger: ACCTTTCCTCCCGTTGAGCAACATCCCATCCAGACA...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp CTAAGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTATGTCTGGATGGGATGTaGCTCAACGGGAGGAAAGGT +
Preference number: 5 (lower is better)
Translates to: LRQLRCLFLASRGRDQLLCLDGM*LNGRKG
Trigger: ACCTTTCCTCCCGTTGAGCAACATCCCATCCAGACA...TAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGAAGGTGCTACCTTCTTaGTCCTCTTGTTCAGGCACA +
Preference number: 5 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLKVLPS*SSCSGT
Trigger: TGTGCCTGAACAAGAGGACAAAGAAGGTAGCACCTT...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
CDS-3UTR CAA 90 bp GGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGCAAGGAAAAGGGCCAATaGACGAAGAGCCTACTATGT +
Preference number: 5 (lower is better)
Translates to: GNSGVYFWLAEGGTSYYCKEKGQ*TKSLLC
Trigger: ACATAGTAGGCTCTTCGTCAATTGGCCCTTTTCCTT...GCAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640868.1
CDS-3UTR CAA 90 bp AGGCAACTCAGGTGTTTATTTCTGGCTAGCAGAGGGAGGGACCAGTTACTACTGGGAAGCTTTCTCAAGTaGTCTAGTGGGAAGGAAAAG +
Preference number: 5 (lower is better)
Translates to: RQLRCLFLASRGRDQLLLGSFLK*SSGKEK
Trigger: CTTTTCCTTCCCACTAGACAACTTGAGAAAGCTTCC...CAGTAGTAACTGGTCCCTCCCTCTGCTAGCCAGAAATAAACACCTGAGTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640868.1
CDS GCA 72 bp TGGGCGCTCAGCCGCACATCCGAGTGCCCGGCCCGCTaGTGCTGGCAGGACGCGGAGGGGCGGGTGGCGCCG +
Preference number: 6 (lower is better)
Translates to: WALSRTSECPAR*CWQDAEGRVAP
Trigger: CGGCGCCACCCGCCCCTCCGCGTCCTGCCAGCAGCAGCGGGCCGGGCACTCGGATGTGCGGCTGAGCGCCCA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 72 bp CGGCCCGCTGCTGCTGGCAGGACGCGGAGGGGCGGGTaGCGCCGCCCACAGAGGGGTAGGACACCAACACGC +
Preference number: 6 (lower is better)
Translates to: RPAAAGRTRRGG*RRPQRGRTPTR
Trigger: GCGTGTTGGTGTCCTACCCCTCTGTGGGCGGCGCCACCCGCCCCTCCGCGTCCTGCCAGCAGCAGCGGGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 72 bp CGTTTCACGGCCGCCTTGCGGCGCATCCTGTGGTGGTaGGCGCTCAGCCGCACATCCGAGTGCCCGGCCCGC +
Preference number: 6 (lower is better)
Translates to: RFTAALRRILWW*ALSRTSECPAR
Trigger: GCGGGCCGGGCACTCGGATGTGCGGCTGAGCGCCCACCACCACAGGATGCGCCGCAAGGCGGCCGTGAAACG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CAA 72 bp GGGAGCCTCGCAGGGTCCAGGCGTTTCACGGCCGCCTaGCGGCGCATCCTGTGGTGGTGGGCGCTCAGCCGC +
Preference number: 6 (lower is better)
Translates to: GSLAGSRRFTAA*RRILWWWALSR
Trigger: GCGGCTGAGCGCCCACCACCACAGGATGCGCCGCAAGGCGGCCGTGAAACGCCTGGACCCTGCGAGGCTCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS GCA 72 bp TCCGCCTTGGACCGGGTCACCCCGCGGTCTCGGACCTaGCTCTCCTGCCTCGAGCCTTCGTGCGCCATCGCC +
Preference number: 6 (lower is better)
Translates to: SALDRVTPRSRT*LSCLEPSCAIA
Trigger: GGCGATGGCGCACGAAGGCTCGAGGCAGGAGAGGCAGGTCCGAGACCGCGGGGTGACCCGGTCCAAGGCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640331.1
ENST00000684111.1
CDS CCA 72 bp AGGCGTTTCACGGCCGCCTTGCGGCGCATCCTGTGGTaGTGGGCGCTCAGCCGCACATCCGAGTGCCCGGCC +
Preference number: 6 (lower is better)
Translates to: RRFTAALRRILW*WALSRTSECPA
Trigger: GGCCGGGCACTCGGATGTGCGGCTGAGCGCCCACCACCACAGGATGCGCCGCAAGGCGGCCGTGAAACGCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CAA 90 bp GCCTTCCCCTCCCAACCGCTGGGCCACCTGACACTGGGCCACAGCTaGGGGCTGCGGCTGCGGGCCACATCAGGGAGCACCGGGTGTGTG +
Preference number: 6 (lower is better)
Translates to: AFPSQPLGHLTLGHS*GLRLRATSGSTGCV
Trigger: CACACACCCGGTGCTCCCTGATGTGGCCCGCAGCCGCAGCCCCAAGCTGTGGCCCAGTGTCAGGTGGCCCAGCGGTTGGGAGGGGAAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 72 bp TCCAGGCGTTTCACGGCCGCCTTGCGGCGCATCCTGTaGTGGTGGGCGCTCAGCCGCACATCCGAGTGCCCG +
Preference number: 6 (lower is better)
Translates to: SRRFTAALRRIL*WWALSRTSECP
Trigger: CGGGCACTCGGATGTGCGGCTGAGCGCCCACCACCACAGGATGCGCCGCAAGGCGGCCGTGAAACGCCTGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 72 bp GCACTGGCACAGTGGGCGGCCGCACTTTTTCCGCCTTaGACCGGGTCACCCCGCGGTCTCGGACCTGCCTCG +
Preference number: 6 (lower is better)
Translates to: ALAQWAAALFPP*TGSPRGLGPAS
Trigger: CGAGGCAGGTCCGAGACCGCGGGGTGACCCGGTCCAAGGCGGAAAAAGTGCGGCCGCCCACTGTGCCAGTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612891.4
CDS CAA 72 bp GGCACTGGCACAGTGGGCGGCCGCACTTTTTCCGCCTaGGACCGGGTCACCCCGCGGTCTCGGACCTGCCTC +
Preference number: 6 (lower is better)
Translates to: GTGTVGGRTFSA*DRVTPRSRTCL
Trigger: GAGGCAGGTCCGAGACCGCGGGGTGACCCGGTCCAAGGCGGAAAAAGTGCGGCCGCCCACTGTGCCAGTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000638555.1
ENST00000640331.1
ENST00000640371.1
ENST00000640868.1
ENST00000684111.1
CDS CAA 90 bp TCCACCTGCGGCACTGGCACAGTGGGCGGCCGCACTTTTTCCGCCTaGGACCGGGTCACCCCGCGGTCTCGGACCTGCCTCTCCTGCCTC +
Preference number: 6 (lower is better)
Translates to: STCGTGTVGGRTFSA*DRVTPRSRTCLSCL
Trigger: GAGGCAGGAGAGGCAGGTCCGAGACCGCGGGGTGACCCGGTCCAAGGCGGAAAAAGTGCGGCCGCCCACTGTGCCAGTGCCGCAGGTGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290390.9
ENST00000638555.1
ENST00000640331.1
ENST00000640371.1
ENST00000640868.1
ENST00000684111.1
CDS CAA 90 bp TCCACCTGCGGCACTGGCACAGTGGGCGGCCGCACTTTTTCCGCCTaGGACCGGGTCACCCCGCGGTCTCGGACCTGCCTCGAGCCTTCG +
Preference number: 6 (lower is better)
Translates to: STCGTGTVGGRTFSA*DRVTPRSRTCLEPS
Trigger: CGAAGGCTCGAGGCAGGTCCGAGACCGCGGGGTGACCCGGTCCAAGGCGGAAAAAGTGCGGCCGCCCACTGTGCCAGTGCCGCAGGTGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612891.4
CDS TCA 72 bp CAGGCCCTCCGAGGTGGACGCGTGCAGCACGGGCACTaGACCCTGAGCCCAGGAGTCCGTCGTGCATGCCGA +
Preference number: 6 (lower is better)
Translates to: QALRGGRVQHGH*TLSPGVRRACR
Trigger: TCGGCATGCACGACGGACTCCTGGGCTCAGGGTTCAGTGCCCGTGCTGCACGCGTCCACCTCGGAGGGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640331.1
ENST00000640371.1
ENST00000640868.1
ENST00000684111.1
CDS TCA 72 bp CACCAACACGCCCGAGGCGATGCAGGGCACCCCCTCTaGCCTGAGTTCCAGCCGATCCCCAGCCGCGTCCAG +
Preference number: 6 (lower is better)
Translates to: HQHARGDAGHPL*PEFQPIPSRVQ
Trigger: CTGGACGCGGCTGGGGATCGGCTGGAACTCAGGTCAGAGGGGGTGCCCTGCATCGCCTCGGGCGTGTTGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS TCA 72 bp AGGTCGGCAGGGAGGGGCGGGAGAGGGAGACGAGTCTaGAGGACCCGGATCCCGGCCCACCTGCTGAGTCAG +
Preference number: 6 (lower is better)
Translates to: RSAGRGGRGRRV*RTRIPAHLLSQ
Trigger: CTGACTCAGCAGGTGGGCCGGGATCCGGGTCCTTCAGACTCGTCTCCCTCTCCCGCCCCTCCCTGCCGACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640331.1
ENST00000640868.1
CDS GCA 72 bp ACGGAAAGGAATGCCTGGCCGGAGAGGGAAGAACGCTaGCGGGGAGACACGGGTGCCGGGGCCGAGGGCTTG +
Preference number: 6 (lower is better)
Translates to: TERNAWPEREER*RGDTGAGAEGL
Trigger: CAAGCCCTCGGCCCCGGCACCCGTGTCTCCCCGGCAGCGTTCTTCCCTCTCCGGCCAGGCATTCCTTTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS GCA 72 bp TCGAGGCCATCTGCCAGGATCCTGGCCCTCCCTGTCTaGCAGCTCCAGACCCTGTGGAGGCACGCGGGTCCG +
Preference number: 6 (lower is better)
Translates to: SRPSARILALPV*QLQTLWRHAGP
Trigger: CGGACCCGCGTGCCTCCACAGGGTCTGGAGCTGGCAGACAGGGAGGGCCAGGATCCTGGCAGATGGCCTCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 72 bp GCACTGGCACAGTGGGCGGCCGCACTTTTTCCGCCTTaGACCGGGTCACCCCGCGGTCTCGGACCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: ALAQWAAALFPP*TGSPRGLGPAS
Trigger: AGAGGCAGGTCCGAGACCGCGGGGTGACCCGGTCCAAGGCGGAAAAAGTGCGGCCGCCCACTGTGCCAGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290390.9
ENST00000638555.1
ENST00000640331.1
ENST00000640371.1
ENST00000640868.1
ENST00000684111.1
CDS CCA 72 bp GCGCTCAAGGACCCGGCCGAGGAGAGGCCTCTAGACTaGCCGTCCGCTTCCTCTACAGGACCTCCGGGCCCT +
Preference number: 6 (lower is better)
Translates to: ALKDPAEERPLD*PSASSTGPPGP
Trigger: AGGGCCCGGAGGTCCTGTAGAGGAAGCGGACGGCCAGTCTAGAGGCCTCTCCTCGGCCGGGTCCTTGAGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 72 bp TCGGCATCGTCGGCAGGCGCCTCCTCCACCGACAGTTaGAAGCTCGCGCTCAAGGACCCGGCCGAGGAGAGG +
Preference number: 6 (lower is better)
Translates to: SASSAGASSTDS*KLALKDPAEER
Trigger: CCTCTCCTCGGCCGGGTCCTTGAGCGCGAGCTTCCAACTGTCGGTGGAGGAGGCGCCTGCCGACGATGCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CAA 72 bp GTCGGCATCGTCGGCAGGCGCCTCCTCCACCGACAGTaGGAAGCTCGCGCTCAAGGACCCGGCCGAGGAGAG +
Preference number: 6 (lower is better)
Translates to: VGIVGRRLLHRQ*EARAQGPGRGE
Trigger: CTCTCCTCGGCCGGGTCCTTGAGCGCGAGCTTCCAACTGTCGGTGGAGGAGGCGCCTGCCGACGATGCCGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS TCA 72 bp TCCGAGGTGGACGCGTGCAGCACGGGCACTGAACCCTaGGCCCAGGAGTCCGTCGTGCATGCCGAAGGCTCC +
Preference number: 6 (lower is better)
Translates to: SEVDACSTGTEP*AQESVVHAEGS
Trigger: GGAGCCTTCGGCATGCACGACGGACTCCTGGGCTCAGGGTTCAGTGCCCGTGCTGCACGCGTCCACCTCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640331.1
ENST00000640371.1
ENST00000640868.1
ENST00000684111.1
CDS TCA 72 bp ACACGCCCGAGGCGATGCAGGGCACCCCCTCTGACCTaGGTTCCAGCCGATCCCCAGCCGCGTCCAGTTGAG +
Preference number: 6 (lower is better)
Translates to: TRPRRCRAPPLT*VPADPQPRPVE
Trigger: CTCAACTGGACGCGGCTGGGGATCGGCTGGAACTCAGGTCAGAGGGGGTGCCCTGCATCGCCTCGGGCGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS GCA 72 bp CCCTCGTCCCGGGCCAGGAAGCGCCACTCGGTGATCTaGAGCATGGCCTCCCGGGCCTGGCTGATGGTGAAT +
Preference number: 6 (lower is better)
Translates to: PSSRARKRHSVI*SMASRAWLMVN
Trigger: ATTCACCATCAGCCAGGCCCGGGAGGCCATGCTGCAGATCACCGAGTGGCGCTTCCTGGCCCGGGACGAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640331.1
ENST00000640371.1
ENST00000640868.1
ENST00000684111.1
CDS CAA 72 bp CCGCTGGCGTCCGCGGTAGGCTTCCAAGGGGCGTGTTaGAGAGTCTGGGACCAGGACCTCAGCCAGAGGGCG +
Preference number: 6 (lower is better)
Translates to: PLASAVGFQGAC*RVWDQDLSQRA
Trigger: CGCCCTCTGGCTGAGGTCCTGGTCCCAGACTCTCAAACACGCCCCTTGGAAGCCTACCGCGGACGCCAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CAA 90 bp CAGAGAAGGGTCGGCATCGTCGGCAGGCGCCTCCTCCACCGACAGTaGGAAGCTCGCGCTCAAGGACCCGGCCGAGGAGAGGCCTCTAGA +
Preference number: 6 (lower is better)
Translates to: QRRVGIVGRRLLHRQ*EARAQGPGRGEASR
Trigger: TCTAGAGGCCTCTCCTCGGCCGGGTCCTTGAGCGCGAGCTTCCAACTGTCGGTGGAGGAGGCGCCTGCCGACGATGCCGACCCTTCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS GCA 72 bp GCACGGGCACTGAACCCTGAGCCCAGGAGTCCGTCGTaGATGCCGAAGGCTCCTCGTCCTCACCCCATGTGG +
Preference number: 6 (lower is better)
Translates to: ARALNPEPRSPS*MPKAPRPHPMW
Trigger: CCACATGGGGTGAGGACGAGGAGCCTTCGGCATGCACGACGGACTCCTGGGCTCAGGGTTCAGTGCCCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640331.1
ENST00000640371.1
ENST00000640868.1
ENST00000684111.1
CDS GCA 72 bp GGAGTGCGGGGCCCGAGTCCAAGTCACGGAAAGGAATaGCTGGCCGGAGAGGGAAGAACGCTGCCGGGGAGA +
Preference number: 6 (lower is better)
Translates to: GVRGPSPSHGKE*LAGEGRTLPGR
Trigger: TCTCCCCGGCAGCGTTCTTCCCTCTCCGGCCAGGCATTCCTTTCCGTGACTTGGACTCGGGCCCCGCACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 72 bp GGTCTTCGCCTTGGAAGTTCTCCAGGCCCTCCGAGGTaGACGCGTGCAGCACGGGCACTGAACCCTGAGCCC +
Preference number: 6 (lower is better)
Translates to: GLRLGSSPGPPR*TRAARALNPEP
Trigger: GGGCTCAGGGTTCAGTGCCCGTGCTGCACGCGTCCACCTCGGAGGGCCTGGAGAACTTCCAAGGCGAAGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290390.9
ENST00000612891.4
CDS CCA 72 bp TGCGGGGCCCGAGTCCAAGTCACGGAAAGGAATGCCTaGCCGGAGAGGGAAGAACGCTGCCGGGGAGACACG +
Preference number: 6 (lower is better)
Translates to: CGARVQVTERNA*PEREERCRGDT
Trigger: CGTGTCTCCCCGGCAGCGTTCTTCCCTCTCCGGCCAGGCATTCCTTTCCGTGACTTGGACTCGGGCCCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS TCA 72 bp TCCGCTTCCTCTACAGGACCTCCGGGCCCTGCCTCCTaGAACAGCTCTGATGTGGGAGGAGGGGCCGACGTG +
Preference number: 6 (lower is better)
Translates to: SASSTGPPGPAS*NSSDVGGGADV
Trigger: CACGTCGGCCCCTCCTCCCACATCAGAGCTGTTTCAGGAGGCAGGGCCCGGAGGTCCTGTAGAGGAAGCGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640331.1
ENST00000640868.1
ENST00000684111.1
CDS GCA 72 bp TCCGCCTTGGACCGGGTCACCCCGCGGTCTCGGACCTaGCTCTCCTGCCTCTGGACAATAGGTGACTGCATC +
Preference number: 6 (lower is better)
Translates to: SALDRVTPRSRT*LSCLWTIGDCI
Trigger: GATGCAGTCACCTATTGTCCAGAGGCAGGAGAGGCAGGTCCGAGACCGCGGGGTGACCCGGTCCAAGGCGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290390.9
ENST00000640371.1
CDS GCA 72 bp CTCCTCGTCCTCACCCCATGTGGGGTCCTCAGCTACTaGAGATTCTCCCTCGTCCCGGGCCAGGAAGCGCCA +
Preference number: 6 (lower is better)
Translates to: LLVLTPCGVLSY*RFSLVPGQEAP
Trigger: TGGCGCTTCCTGGCCCGGGACGAGGGAGAATCTGCAGTAGCTGAGGACCCCACATGGGGTGAGGACGAGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640331.1
ENST00000640371.1
ENST00000640868.1
ENST00000684111.1
CDS GCA 72 bp GCCTCCCGGGCCTGGCTGATGGTGAATGGAATGCACTaGGGAGGCGAGAGAGGATCTCAGGTCGGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: ASRAWLMVNGMH*GGERGSQVGRE
Trigger: CTCCCTGCCGACCTGAGATCCTCTCTCGCCTCCGCAGTGCATTCCATTCACCATCAGCCAGGCCCGGGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640331.1
ENST00000640868.1
CDS CCA 72 bp CGCCACTCGGTGATCTGCAGCATGGCCTCCCGGGCCTaGCTGATGGTGAATGGAATGCACTGCGGAGGCGAG +
Preference number: 6 (lower is better)
Translates to: RHSVICSMASRA*LMVNGMHCGGE
Trigger: CTCGCCTCCGCAGTGCATTCCATTCACCATCAGCCAGGCCCGGGAGGCCATGCTGCAGATCACCGAGTGGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640331.1
ENST00000640868.1
CDS CCA 72 bp GTACTTCGCCTTGGAAGTTCTCCAGGCCCTCCGAGGTaGACGCGTGCAGCACGGGCACTGAACCCTGAGCCC +
Preference number: 6 (lower is better)
Translates to: VLRLGSSPGPPR*TRAARALNPEP
Trigger: GGGCTCAGGGTTCAGTGCCCGTGCTGCACGCGTCCACCTCGGAGGGCCTGGAGAACTTCCAAGGCGAAGTAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000640331.1
ENST00000640371.1
ENST00000640868.1
ENST00000684111.1
CDS CCA 72 bp ACATCACCTGGGAAGTGGCTTCAAGGACCGGGGGTGTaGTTCGAGGCCATCTGCCAGGATCCTGGCCCTCCC +
Preference number: 6 (lower is better)
Translates to: TSPGKWLQGPGV*FEAICQDPGPP
Trigger: GGGAGGGCCAGGATCCTGGCAGATGGCCTCGAACCACACCCCCGGTCCTTGAAGCCACTTCCCAGGTGATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 72 bp GAGTCCGGAGAGGCTCCTGAGGAGTGTACTTCGCCTTaGAAGTTCTCCAGGCCCTCCGAGGTGGACGCGTGC +
Preference number: 6 (lower is better)
Translates to: ESGEAPEECTSP*KFSRPSEVDAC
Trigger: GCACGCGTCCACCTCGGAGGGCCTGGAGAACTTCCAAGGCGAAGTACACTCCTCAGGAGCCTCTCCGGACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000640331.1
ENST00000640371.1
ENST00000640868.1
ENST00000684111.1
CDS GCA 72 bp TCCGCCTTGGACCGGGTCACCCCGCGGTCTCGGACCTaGCTCTCCTGCCTCTGTGAGAACAAAACATGGCAA +
Preference number: 6 (lower is better)
Translates to: SALDRVTPRSRT*LSCLCENKTWQ
Trigger: TTGCCATGTTTTGTTCTCACAGAGGCAGGAGAGGCAGGTCCGAGACCGCGGGGTGACCCGGTCCAAGGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640868.1
CDS CCA 72 bp CTGGCAGCAACACGGGCTTCCACATCACCTGGGAAGTaGCTTCAAGGACCGGGGGTGTGGTTCGAGGCCATC +
Preference number: 6 (lower is better)
Translates to: LAATRASTSPGK*LQGPGVWFEAI
Trigger: GATGGCCTCGAACCACACCCCCGGTCCTTGAAGCCACTTCCCAGGTGATGTGGAAGCCCGTGTTGCTGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS GCA 72 bp TCTGATGTGGGAGGAGGGGCCGACGTGACTCTCAGCTaGGGAGAAGGCTCCCAAGATTCCATCTGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: SDVGGGADVTLS*GEGSQDSICSW
Trigger: CCAGGAGCAGATGGAATCTTGGGAGCCTTCTCCGCAGCTGAGAGTCACGTCGGCCCCTCCTCCCACATCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640331.1
ENST00000640868.1
ENST00000684111.1
CDS CCA 72 bp AGGGCTTCTGGCAGCAACACGGGCTTCCACATCACCTaGGAAGTGGCTTCAAGGACCGGGGGTGTGGTTCGA +
Preference number: 6 (lower is better)
Translates to: RASGSNTGFHIT*EVASRTGGVVR
Trigger: TCGAACCACACCCCCGGTCCTTGAAGCCACTTCCCAGGTGATGTGGAAGCCCGTGTTGCTGCCAGAAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 72 bp TCCTCTTGTTCAGGCACACCAGAGCTGAGCAACACCTaGGTGCTCCGGTTCCACATGCTCACACCAGGGGCC +
Preference number: 6 (lower is better)
Translates to: SSCSGTPELSNT*VLRFHMLTPGA
Trigger: GGCCCCTGGTGTGAGCATGTGGAACCGGAGCACCCAGGTGTTGCTCAGCTCTGGTGTGCCTGAACAAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS TCA 72 bp CCTGAAACAGCTCTGATGTGGGAGGAGGGGCCGACGTaGCTCTCAGCTGCGGAGAAGGCTCCCAAGATTCCA +
Preference number: 6 (lower is better)
Translates to: PETALMWEEGPT*LSAAEKAPKIP
Trigger: TGGAATCTTGGGAGCCTTCTCCGCAGCTGAGAGTCACGTCGGCCCCTCCTCCCACATCAGAGCTGTTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640331.1
ENST00000640868.1
ENST00000684111.1
CDS TCA 72 bp AGCAGGAGCAATGGCAGAGGAGTCCGGAGAGGCTCCTaGGGAGTGTACTTCGCCTTGGAAGTTCTCCAGGCC +
Preference number: 6 (lower is better)
Translates to: SRSNGRGVRRGS*GVYFALEVLQA
Trigger: GGCCTGGAGAACTTCCAAGGCGAAGTACACTCCTCAGGAGCCTCTCCGGACTCCTCTGCCATTGCTCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000640331.1
ENST00000640371.1
ENST00000640868.1
ENST00000684111.1
CDS GCA 72 bp ACTCTCAGCTGCGGAGAAGGCTCCCAAGATTCCATCTaGTCCTGGGAGCCTCGACCCATCCACGACCTTCCT +
Preference number: 6 (lower is better)
Translates to: TLSCGEGSQDSI*SWEPRPIHDLP
Trigger: AGGAAGGTCGTGGATGGGTCGAGGCTCCCAGGAGCAGATGGAATCTTGGGAGCCTTCTCCGCAGCTGAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640331.1
ENST00000640868.1
ENST00000684111.1
CDS CCA 72 bp GGCAGTGAGATGTCGGAAAGGGGAGAGCAGGAGCAATaGCAGAGGAGTCCGGAGAGGCTCCTGAGGAGTGTA +
Preference number: 6 (lower is better)
Translates to: GSEMSERGEQEQ*QRSPERLLRSV
Trigger: TACACTCCTCAGGAGCCTCTCCGGACTCCTCTGCCATTGCTCCTGCTCTCCCCTTTCCGACATCTCACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000640331.1
ENST00000640371.1
ENST00000640868.1
ENST00000684111.1
CDS CAA 90 bp AGGGATCAGAGGGAGGCAGCAGGCTTAGAGGAGCGTGACCACACTTaGGGGGCTGAGTTCTTCATTAGCTGTGCTACGGTCACCTGGGCT +
Preference number: 6 (lower is better)
Translates to: RDQREAAGLEERDHT*GAEFFISCATVTWA
Trigger: AGCCCAGGTGACCGTAGCACAGCTAATGAAGAACTCAGCCCCCAAAGTGTGGTCACGCTCCTCTAAGCCTGCTGCCTCCCTCTGATCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 72 bp GCTACGGTCACCTGGGCTTTGGGGCACCTGTCTGGATaGGATGTTGCTCAACGGGAGGAAAGGTGCTACCTT +
Preference number: 6 (lower is better)
Translates to: ATVTWALGHLSG*DVAQREERCYL
Trigger: AAGGTAGCACCTTTCCTCCCGTTGAGCAACATCCCATCCAGACAGGTGCCCCAAAGCCCAGGTGACCGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 72 bp CTGTGCTACGGTCACCTGGGCTTTGGGGCACCTGTCTaGATGGGATGTTGCTCAACGGGAGGAAAGGTGCTA +
Preference number: 6 (lower is better)
Translates to: LCYGHLGFGAPV*MGCCSTGGKVL
Trigger: TAGCACCTTTCCTCCCGTTGAGCAACATCCCATCCAGACAGGTGCCCCAAAGCCCAGGTGACCGTAGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CAA 90 bp TTGGGGGCTGAGTTCTTCATTAGCTGTGCTACGGTCACCTGGGCTTaGGGGCACCTGTCTGGATGGGATGTTGCTCAACGGGAGGAAAGG +
Preference number: 6 (lower is better)
Translates to: LGAEFFISCATVTWA*GHLSGWDVAQREER
Trigger: CCTTTCCTCCCGTTGAGCAACATCCCATCCAGACAGGTGCCCCAAAGCCCAGGTGACCGTAGCACAGCTAATGAAGAACTCAGCCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 72 bp ACTCGAGGGATGGCGACGATAGGCCTAAATTTAAAGTaGGGAACAGGAGTGCGGGGCCCGAGTCCAAGTCAC +
Preference number: 6 (lower is better)
Translates to: TRGMATIGLNLK*GTGVRGPSPSH
Trigger: GTGACTTGGACTCGGGCCCCGCACTCCTGTTCCCCACTTTAAATTTAGGCCTATCGTCGCCATCCCTCGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 72 bp GGGGCTGAGTTCTTCATTAGCTGTGCTACGGTCACCTaGGCTTTGGGGCACCTGTCTGGATGGGATGTTGCT +
Preference number: 6 (lower is better)
Translates to: GAEFFISCATVT*ALGHLSGWDVA
Trigger: AGCAACATCCCATCCAGACAGGTGCCCCAAAGCCCAGGTGACCGTAGCACAGCTAATGAAGAACTCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CAA 90 bp GGGATGTTGCTCAACGGGAGGAAAGGTGCTACCTTCTTTGTCCTCTaGTTCAGGCACACCAGAGCTGAGCAACACCTGGGTGCTCCGGTT +
Preference number: 6 (lower is better)
Translates to: GMLLNGRKGATFFVL*FRHTRAEQHLGAPV
Trigger: AACCGGAGCACCCAGGTGTTGCTCAGCTCTGGTGTGCCTGAACAAGAGGACAAAGAAGGTAGCACCTTTCCTCCCGTTGAGCAACATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CAA 90 bp GTGCTACGGTCACCTGGGCTTTGGGGCACCTGTCTGGATGGGATGTaGCTCAACGGGAGGAAAGGTGCTACCTTCTTTGTCCTCTTGTTC +
Preference number: 6 (lower is better)
Translates to: VLRSPGLWGTCLDGM*LNGRKGATFFVLLF
Trigger: GAACAAGAGGACAAAGAAGGTAGCACCTTTCCTCCCGTTGAGCAACATCCCATCCAGACAGGTGCCCCAAAGCCCAGGTGACCGTAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 72 bp AGTTCTTCATTAGCTGTGCTACGGTCACCTGGGCTTTaGGGCACCTGTCTGGATGGGATGTTGCTCAACGGG +
Preference number: 6 (lower is better)
Translates to: SSSLAVLRSPGL*GTCLDGMLLNG
Trigger: CCCGTTGAGCAACATCCCATCCAGACAGGTGCCCCAAAGCCCAGGTGACCGTAGCACAGCTAATGAAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CAA 72 bp TCACCTGGGCTTTGGGGCACCTGTCTGGATGGGATGTaGCTCAACGGGAGGAAAGGTGCTACCTTCTTTGTC +
Preference number: 6 (lower is better)
Translates to: SPGLWGTCLDGM*LNGRKGATFFV
Trigger: GACAAAGAAGGTAGCACCTTTCCTCCCGTTGAGCAACATCCCATCCAGACAGGTGCCCCAAAGCCCAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CAA 72 bp GAGTTCTTCATTAGCTGTGCTACGGTCACCTGGGCTTaGGGGCACCTGTCTGGATGGGATGTTGCTCAACGG +
Preference number: 6 (lower is better)
Translates to: EFFISCATVTWA*GHLSGWDVAQR
Trigger: CCGTTGAGCAACATCCCATCCAGACAGGTGCCCCAAAGCCCAGGTGACCGTAGCACAGCTAATGAAGAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CAA 90 bp GTCTGGATGGGATGTTGCTCAACGGGAGGAAAGGTGCTACCTTCTTaGTCCTCTTGTTCAGGCACACCAGAGCTGAGCAACACCTGGGTG +
Preference number: 6 (lower is better)
Translates to: VWMGCCSTGGKVLPS*SSCSGTPELSNTWV
Trigger: CACCCAGGTGTTGCTCAGCTCTGGTGTGCCTGAACAAGAGGACAAAGAAGGTAGCACCTTTCCTCCCGTTGAGCAACATCCCATCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS TCA 72 bp TACCTTCTTTGTCCTCTTGTTCAGGCACACCAGAGCTaGGCAACACCTGGGTGCTCCGGTTCCACATGCTCA +
Preference number: 6 (lower is better)
Translates to: YLLCPLVQAHQS*ATPGCSGSTCS
Trigger: TGAGCATGTGGAACCGGAGCACCCAGGTGTTGCTCAGCTCTGGTGTGCCTGAACAAGAGGACAAAGAAGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS GCA 72 bp CTGTCTGGATGGGATGTTGCTCAACGGGAGGAAAGGTaGTACCTTCTTTGTCCTCTTGTTCAGGCACACCAG +
Preference number: 6 (lower is better)
Translates to: LSGWDVAQREER*YLLCPLVQAHQ
Trigger: CTGGTGTGCCTGAACAAGAGGACAAAGAAGGTAGCACCTTTCCTCCCGTTGAGCAACATCCCATCCAGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CCA 72 bp CGGACCTGCCTCTCCTGCCTCTGTGAGAACAAAACATaGCAATCAGAGCAGGAAACCAAGAAGTGGAACGGA +
Preference number: 6 (lower is better)
Translates to: RTCLSCLCENKT*QSEQETKKWNG
Trigger: TCCGTTCCACTTCTTGGTTTCCTGCTCTGATTGCCATGTTTTGTTCTCACAGAGGCAGGAGAGGCAGGTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640868.1
CDS CAA 72 bp GGATGTTGCTCAACGGGAGGAAAGGTGCTACCTTCTTaGTCCTCTTGTTCAGGCACACCAGAGCTGAGCAAC +
Preference number: 6 (lower is better)
Translates to: GCCSTGGKVLPS*SSCSGTPELSN
Trigger: GTTGCTCAGCTCTGGTGTGCCTGAACAAGAGGACAAAGAAGGTAGCACCTTTCCTCCCGTTGAGCAACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290390.9
ENST00000612891.4
ENST00000640868.1
ENST00000684111.1
CDS CAA 90 bp GTGGAACGGAAGAGTAGCTATAGGCTAGGAGGAAGCTTTCTCAAGTaGTCTAGTGGGAAGGAAAAGGGCCAATTGACGAAGAGCCTACTA +
Preference number: 6 (lower is better)
Translates to: VERKSSYRLGGSFLK*SSGKEKGQLTKSLL
Trigger: TAGTAGGCTCTTCGTCAATTGGCCCTTTTCCTTCCCACTAGACAACTTGAGAAAGCTTCCTCCTAGCCTATAGCTACTCTTCCGTTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640868.1
CDS CAA 72 bp AAGAGTAGCTATAGGCTAGGAGGAAGCTTTCTCAAGTaGTCTAGTGGGAAGGAAAAGGGCCAATTGACGAAG +
Preference number: 6 (lower is better)
Translates to: KSSYRLGGSFLK*SSGKEKGQLTK
Trigger: CTTCGTCAATTGGCCCTTTTCCTTCCCACTAGACAACTTGAGAAAGCTTCCTCCTAGCCTATAGCTACTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640868.1
CDS CAA 72 bp TTTCTCAAGTTGTCTAGTGGGAAGGAAAAGGGCCAATaGACGAAGAGCCTACTATGTGACAGATACTTAGTA +
Preference number: 6 (lower is better)
Translates to: FLKLSSGKEKGQ*TKSLLCDRYLV
Trigger: TACTAAGTATCTGTCACATAGTAGGCTCTTCGTCAATTGGCCCTTTTCCTTCCCACTAGACAACTTGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640868.1