RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C2ORF78 (Homo sapiens)

Ensembl gene IDs: ENSG00000187833

Ensembl transcript IDs: ENST00000409561.1

Found 231 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTCTGCCCATGAGTGGCTaGAAGGAGGTGCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISALPMSG*KEVPEA
Trigger: AGCCTCTGGCACCTCCTTCCAGCCACTCATGGGCAG...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTTGAGGCTTGGGCAGTaGCCGGAGACTGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTILRLGQ*PETGHS
Trigger: GCTGTGACCAGTCTCCGGTCACTGCCCAAGCCTCAA...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTGACCTTCCCAGGTGGTaGCAACTCAGAGTGGGATGG +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISADLPRW*QLRVGW
Trigger: CCATCCCACTCTGAGTTGCCACCACCTGGGAAGGTC...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTCTGGCTCAGGAACAGTaGGTTTCCTCCATGGACGGG +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISALAQEQ*VSSMDG
Trigger: CCCGTCCATGGAGGAAACCCACTGTTCCTGAGCCAG...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR GCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTACTCTAGCATGTGCATaGCTAGGGAGCTTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISATLACA*LGSFGA
Trigger: AGCCCCGAAGCTCCCTAGGCATGCACATGCTAGAGT...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR GCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCGGCGGTTTTGGGTGTTaGTTGAGCTTCCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIGGFGC*LSFPGS
Trigger: GGACCCTGGGAAGCTCAAGCAACACCCAAAACCGCC...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGACTGGTCACAGCAGTaGAAACAGGCTCCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISDWSQQ*KQAPAA
Trigger: TGCAGCGGGAGCCTGTTTCCACTGCTGTGACCAGTC...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTCATGGCCTCACGCTCTaGCCTCTGCTCTTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISAHGLTL*PLLFCD
Trigger: ATCACAGAAGAGCAGAGGCCAGAGCGTGAGGCCATG...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTGAGCCTTTCTCTTCATaGCCTCACGCTCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISAEPFSS*PHALAS
Trigger: AGAGGCCAGAGCGTGAGGCCATGAAGAGAAAGGCTC...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCATATCTGGCAGGGAAGTaGCAGGTTATGGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISYLAGK*QVMALL
Trigger: CAGCAGGGCCATAACCTGTCACTTCCCTGCCAGATA...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTAGGACATTTGTGGGCTaGACCTCCTTCAGCACCATC +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISARTFVG*TSFSTI
Trigger: GATGGTGCTGAAGGAGGTTCAGCCCACAAATGTCCT...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTATCCAGCCATGGTTTaGGAGCTGGGAATGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIYPAMV*ELGMAG
Trigger: GCCAGCCATTCCCAGCTCTCAAACCATGGCTGGATA...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR GCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCACGGACTCTAGCATGTaGATGCCTAGGGAGCTTCGG +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTITDSSM*MPRELR
Trigger: CCGAAGCTCCCTAGGCATGCACATGCTAGAGTCCGT...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR GCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCATCACGCTCTGGCCTCTaGTCTTCTGTGATGGGCGTT +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISSRSGL*SSVMGV
Trigger: AACGCCCATCACAGAAGAGCAGAGGCCAGAGCGTGA...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCACCAGGCTGCTCCTCTTaGCCAAGAGGATCAATGCAG +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISPGCSS*PRGSMQ
Trigger: CTGCATTGATCCTCTTGGCCAAGAGGAGCAGCCTGG...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCCTTGGGAGCACCCTaGATAGGCTCGGAAGCTTTA +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISALGAP*IGSEAL
Trigger: TAAAGCTTCCGAGCCTATCCAGGGTGCTCCCAAGGC...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTCCATGGTTTGAGAGCTaGGAATGGCTGGCGGTTTTG +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISAPWFES*EWLAVL
Trigger: CAAAACCGCCAGCCATTCCCAGCTCTCAAACCATGG...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCACTTGACCTTCCCAGGTaGTGGCAACTCAGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISLDLPR*WQLRVG
Trigger: TCCCACTCTGAGTTGCCACCACCTGGGAAGGTCAAG...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCGCAGTGACCGGAGACTaGTCACAGCAGTGGAAACAG +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIAVTGD*SQQWKQ
Trigger: CTGTTTCCACTGCTGTGACCAGTCTCCGGTCACTGC...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTCTCCATGGACGGGGTTaGAGGCTGAAGTCTTGGATT +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISALHGRG*RLKSWI
Trigger: AATCCAAGACTTCAGCCTCCAACCCCGTCCATGGAG...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCAGTGGGTTTCCTCCATaGACGGGGTTGGAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTISGFPP*TGLEAE
Trigger: TTCAGCCTCCAACCCCGTCCATGGAGGAAACCCACT...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCATGCATGTGTCCAGTATaGAGGCCACTGGTCACTGGT +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISCMCPV*RPLVTG
Trigger: ACCAGTGACCAGTGGCCTTCATACTGGACACATGCA...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCGTCCCCAAGCTCAGGTaGTGGGTTACTCTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIVPKLR*WVTLKC
Trigger: ACACTTGAGAGTAACCCATCACCTGAGCTTGGGGAC...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCCAGGCCAGAAGCGGGTaGATATCGGGGATTTCTACA +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIQARSG*ISGIST
Trigger: TGTAGAAATCCCCGATATTCACCCGCTTCTGGCCTG...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTCTGGATGCAGCCTTGTaGGGTTTGTTGCTAGAATGC +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISALDAAL*GLLLEC
Trigger: GCATTCTAGCAACAAACCTCACAAGGCTGCATCCAG...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTCTAGTTTCTGGGCCTTaGCTTGAATTTTCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISALVSGP*LEFSPG
Trigger: GCCCGGAGAAAATTCAAGTCAAGGCCCAGAAACTAG...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCGCAAAGGTATCAACTTaGCCTTCCCAGGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIAKVST*PSQVVA
Trigger: TGCCACCACCTGGGAAGGTCAAGTTGATACCTTTGC...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCGAAACATGTCGAGCTTaGGGTTGGTCCAGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIETCRA*GWSRVR
Trigger: TCTGACCCTGGACCAACCTCAAGCTCGACATGTTTC...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCCTGGTCGGGATGGATTaGCTGCATTCGATTGAGCTG +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTILVGMD*LHSIEL
Trigger: CAGCTCAATCGAATGCAGTCAATCCATCCCGACCAG...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTTTCTGTGATGGGCGTTaGCATTACTGGCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISAFCDGR*HYWLRN
Trigger: GTTCCTGAGCCAGTAATGTCAACGCCCATCACAGAA...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCCTCTGCTCTTCTGTaGTGGGCGTTGACATTACTG +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISASALL*WALTLL
Trigger: CAGTAATGTCAACGCCCATCACAGAAGAGCAGAGGC...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR GCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTTTTTCAGAACCAGGCTaGTCCTCTTGGCCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISAFSEPG*SSWPRG
Trigger: TCCTCTTGGCCAAGAGGAGCAGCCTGGTTCTGAAAA...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR GCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTGCTGATCCTGCTGGATaGAGCCTTGTGAGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISAADPAG*SLVRFV
Trigger: AACAAACCTCACAAGGCTGCATCCAGCAGGATCAGC...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCACTGGTCACTGGTTACTaGTCACTGGCCCCTTGTGAT +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISLVTGY*SLAPCD
Trigger: ATCACAAGGGGCCAGTGACCAGTAACCAGTGACCAG...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTACCTGGCTTCCTATCTaGCAGGGAAGTGACAGGTTA +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISATWLPI*QGSDRL
Trigger: TAACCTGTCACTTCCCTGCCAGATAGGAAGCCAGGT...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTGTGGTAGGACATTTGTaGGCTGAACCTCCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISAVVGHL*AEPPSA
Trigger: TGCTGAAGGAGGTTCAGCCCACAAATGTCCTACCAC...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCGCACTCTGGGTTCTTTaGCTGGATTTTGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIALWVL*LDFGLG
Trigger: CCCAAGGCCAAAATCCAGCCAAAGAACCCAGAGTGC...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAAATGGCTGGCGGTTTTaGGTGTTGCTTGAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISNGWRF*VLLELP
Trigger: GGGAAGCTCAAGCAACACCCAAAACCGCCAGCCATT...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAAGAGCTGGGAATGGCTaGCGGTTTTGGGTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISRAGNG*RFWVLL
Trigger: AAGCAACACCCAAAACCGCCAGCCATTCCCAGCTCT...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTAGGAGCTGGTCGGGATaGATTGACTGCATTCGATTG +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISARSWSG*IDCIRL
Trigger: CAATCGAATGCAGTCAATCCATCCCGACCAGCTCCT...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTGTGTTGGTAGGAGCTaGTCGGGATGGATTGACTGC +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTICVGRS*SGWIDC
Trigger: GCAGTCAATCCATCCCGACCAGCTCCTACCAACACA...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCATTGGCTGAGCTGGTGTaGCAGGACCTGTCAAAGATG +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISLAELV*QDLSKM
Trigger: CATCTTTGACAGGTCCTGCCACACCAGCTCAGCCAA...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTTGGGTTGGGTTGCTTTaGCTGAAATTGGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISAWVGLL*LKLAEL
Trigger: CAGCTCAGCCAATTTCAGCCAAAGCAACCCAACCCA...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTATTGATTTTGAGGCTTaGGCAGTGACCGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISAIDFEA*AVTGDW
Trigger: CCAGTCTCCGGTCACTGCCCAAGCCTCAAAATCAAT...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCACTGGACTGGAGTTATTaGAATGTCCCCAAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISLDWSY*NVPKLR
Trigger: CCTGAGCTTGGGGACATTTCAATAACTCCAGTCCAG...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTTTCTGGGCCTTGACTTaGATTTTCTCCGGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISAFWALT*IFSGPL
Trigger: TAAAGGCCCGGAGAAAATTCAAGTCAAGGCCCAGAA...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTTCTCACGCTCTTGTTaGGCCTTTCTCTTCATGGCC +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIFSRSC*AFLFMA
Trigger: GGCCATGAAGAGAAAGGCTCAACAAGAGCGTGAGAA...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR GCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCGTCTGGCTTGGAGATTaGAATCCCAGGGAAGTATCC +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIVWLGD*NPREVS
Trigger: GGATACTTCCCTGGGATTGCAATCTCCAAGCCAGAC...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCCAGTATGAAGGCCACTaGTCACTGGTTACTGGTCAC +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIQYEGH*SLVTGH
Trigger: GTGACCAGTAACCAGTGACCAGTGGCCTTCATACTG...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCGTACAGATATGGCTCTaGCCAGTAACCCCAGACAAC +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIVQIWL*PVTPDN
Trigger: GTTGTCTGGGGTTACTGGCCAGAGCCATATCTGTAC...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCGCTGAAGTACAGATATaGCTCTGGCCAGTAACCCCA +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIAEVQI*LWPVTP
Trigger: TGGGGTTACTGGCCAGAGCCATATCTGTACTTCAGC...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCCACCATCACCATTTCTaGTTGATGGGCAGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIHHHHF*LMGRSP
Trigger: AGGGCTTCTGCCCATCAACCAGAAATGGTGATGGTG...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTTGGCACTGGTATCTTTaGCTTTCTTTGCTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISAWHWYL*LSLLRD
Trigger: GTCCCTCAGCAAAGAAAGCCAAAGATACCAGTGCCA...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCTGGGTTCTTTGGCTaGATTTTGGCCTTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTISGFFG*ILALGA
Trigger: TGCTCCCAAGGCCAAAATCCAGCCAAAGAACCCAGA...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAAGCTTCCCAGGGTCCTaGAGGAAGAGAATCCAGTTT +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISSFPGS*RKRIQF
Trigger: AAACTGGATTCTCTTCCTCCAGGACCCTGGGAAGCT...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCATTTGAGAGCTGGGAATaGCTGGCGGTTTTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISFESWE*LAVLGV
Trigger: AACACCCAAAACCGCCAGCCATTCCCAGCTCTCAAA...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGGTGGCAACTCAGAGTaGGATGGAGATGTACACTCT +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISGGNSE*DGDVHS
Trigger: AGAGTGTACATCTCCATCCCACTCTGAGTTGCCACC...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGAGACAGCTGTGTTCTaGTCAATGACAGTCACAGTG +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISETAVF*SMTVTV
Trigger: CACTGTGACTGTCATTGATCAGAACACAGCTGTCTC...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCGAACACTGGTTTCTGTaGTGGGTTGAGAAGACACAG +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIEHWFL*WVEKTQ
Trigger: CTGTGTCTTCTCAACCCATCACAGAAACCAGTGTTC...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCATTTGGCTTTCTTTGCTaGGGGACTTTCAGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISFGFLC*GTFRLV
Trigger: GACCAACCTGAAAGTCCCTCAGCAAAGAAAGCCAAA...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCACCTGATTTACCTTaGTGGCACTGGTATCTTTGG +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISAPDLP*WHWYLW
Trigger: CCAAAGATACCAGTGCCATCAAGGTAAATCAGGTGC...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCGACTTTTCCTGCACCTaGTTTACCTTGATGGCACTG +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIDFSCT*FTLMAL
Trigger: CAGTGCCATCAAGGTAAATCAGGTGCAGGAAAAGTC...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTTGCATTCGATTGAGCTaGGTTAGTAGAATCAGGTCG +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISACIRLS*VSRIRS
Trigger: CGACCTGATTCTACTAACTCAGCTCAATCGAATGCA...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCGACGGGGTTGGAGGCTaGAGTCTTGGATTAGAAATT +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIDGVGG*SLGLEI
Trigger: AATTTCTAATCCAAGACTTCAGCCTCCAACCCCGTC...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR GCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCAGTGCATGGAAAACTTaGACGGACTCTAGCATGTGC +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTISAWKT*TDSSMC
Trigger: GCACATGCTAGAGTCCGTGCAAGTTTTCCATGCACT...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR GCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCGAAACAGGCTCCCGCTaGAGAGAAGAACAAGATGAT +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIETGSR*REEQDD
Trigger: ATCATCTTGTTCTTCTCTGCAGCGGGAGCCTGTTTC...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCCCCTGAACAAGGCTaGCAGATAGTGATGGATACA +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTISPEQG*QIVMDT
Trigger: TGTATCCATCACTATCTGCCAGCCTTGTTCAGGGGA...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGGCAGACAAAATGTCTaGCTTGGAGATTGCAATCCC +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISGRQNV*LGDCNP
Trigger: GGGATTGCAATCTCCAAGCCAGACATTTTGTCTGCC...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCATTGGATATCCAGCCATaGTTTGAGAGCTGGGAATGG +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISLDIQP*FESWEW
Trigger: CCATTCCCAGCTCTCAAACCATGGCTGGATATCCAA...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTCCTATATCCTGTGTATaGCACAGAGCCATAAGATTG +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISAPISCV*HRAIRL
Trigger: CAATCTTATGGCTCTGTGTCATACACAGGATATAGG...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAATCACCATTTCTGGTTaGTGGGCAGAAGCCCTATAT +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISITISG*WAEALY
Trigger: ATATAGGGCTTCTGCCCATCAACCAGAAATGGTGAT...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCGGGTATTTCTGCTACTaGAGGACTTGGAGAATTCTG +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIGYFCY*RTWRIL
Trigger: CAGAATTCTCCAAGTCCTTCAGTAGCAGAAATACCC...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTAGTAGTGGAGGATCTTaGTTTCCTATTAGGATCTGG +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISASSGGS*FPIRIW
Trigger: CCAGATCCTAATAGGAAATCAAGATCCTCCACTACT...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCACAGAGTGACCCTTTATaGCACATGACTTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISQSDPL*HMTFPA
Trigger: TGCAGGAAAAGTCATGTGTCATAAAGGGTCACTCTG...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTATGCTTGTTCTTCCTaGCTTGATCAGAGTGACCCT +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIYACSS*LDQSDP
Trigger: AGGGTCACTCTGATCAAGTCAGGAAGAACAAGCATA...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTCTCTTTCCCTTTCAATaGAAAACTGCACTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISALFPFQ*KTALSP
Trigger: TGGGGAAAGTGCAGTTTTTCATTGAAAGGGAAAGAG...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR GCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCACAGGAAGAGAGAACTaGCGAGAATTTGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTITGREN*REFAVP
Trigger: TGGAACTGCAAATTCTCGGCAGTTCTCTCTTCCTGT...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR GCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTTGGAGAAGTTGGAGATaGTTCCTGTTAAGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISAWRSWR*FLLRKL
Trigger: CAGCTTTCTTAACAGGAAGCATCTCCAACTTCTCCA...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR GCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTGTTGAGGCCCCAGTGTaGCTTGATTATAGTAATAGA +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISAVEAPV*LDYSNR
Trigger: TCTATTACTATAATCAAGGCACACTGGGGCCTCAAC...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR GCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCCCATGTAGTGATGTCTaGCAAATCACTGCTAGACTC +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIPCSDV*QITARL
Trigger: GAGTCTAGCAGTGATTTGGCAGACATCACTACATGG...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR GCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCCCTTTGGTCTTTTCCTaGCCATGGCTCTTAGTTTTG +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIPLVFS*PWLLVL
Trigger: CAAAACTAAGAGCCATGGGCAGGAAAAGACCAAAGG...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR GCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCGATCTTTTTCCCGAGTaGATGGAAAACTTGCACGGA +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIDLFPE*MENLHG
Trigger: TCCGTGCAAGTTTTCCATGCACTCGGGAAAAAGATC...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTTTTTCAAATATCCCTTaGTCCTCAAGACTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISAFSNIP*SSRLRL
Trigger: GAGCCTGAGTCTTGAGGACCAAGGGATATTTGAAAA...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTGAGGGACTTTCAGGTTaGTCAAGATCTTGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISAEGLSG*SRSCKE
Trigger: TTCCTTACAAGATCTTGACCAACCTGAAAGTCCCTC...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCGTCTTTTCCTGCCCATaGCTCTTAGTTTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIVFSCP*LLVLLI
Trigger: GATCAGCAAAACTAAGAGCCATGGGCAGGAAAAGAC...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTTTTTCCCGAGTGCATaGAAAACTTGCACGGACTCT +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIFFPSA*KTCTDS
Trigger: AGAGTCCGTGCAAGTTTTCCATGCACTCGGGAAAAA...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCCCTTTACCCTCATGTTaGATATCCAGCCATGGTTTG +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIPLPSC*ISSHGL
Trigger: CAAACCATGGCTGGATATCCAACATGAGGGTAAAGG...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCATTGGCTGAACTGGGTTaGGTTGCTTTGGCTGAAATT +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISLAELG*VALAEI
Trigger: AATTTCAGCCAAAGCAACCCAACCCAGTTCAGCCAA...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCACCAAAGAGGTGTATTTaGCAGCATTCTCACGCTCTT +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISPKRCI*QHSHAL
Trigger: AAGAGCGTGAGAATGCTGCCAAATACACCTCTTTGG...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCGAAGTTTCCATCACTTaGACACTGGTTTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIEVSIT*TLVSVM
Trigger: CATCACAGAAACCAGTGTTCAAGTGATGGAAACTTC...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCACCCTTTATGACACATaGCTTTTCCTGCACCTGATT +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTITLYDT*LFLHLI
Trigger: AATCAGGTGCAGGAAAAGTCATGTGTCATAAAGGGT...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR GCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTTAAGAAAGCTGCATTaGTCACCACAGGAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTILRKLH*SPQEER
Trigger: TCTCTCTTCCTGTGGTGAGCAATGCAGCTTTCTTAA...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR GCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCGGTTTGTTGCTAGAATaGTTGGCCTTGTTCACAGAA +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIGLLLE*LALFTE
Trigger: TTCTGTGAACAAGGCCAAGCATTCTAGCAACAAACC...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGGACTTGGAGAATTCTaGAGTTTGTGGCAGACAAAA +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISGLGEF*SLWQTK
Trigger: TTTTGTCTGCCACAAACTCCAGAATTCTCCAAGTCC...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCCCTATTAGGATCTGGTaGACATCTAGAGGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIPIRIW*TSRGFE
Trigger: TTCAAAGCCTCTAGATGTCCACCAGATCCTAATAGG...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCCAACTCAGAGTGGGATaGAGATGTACACTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIQLRVG*RCTLFF
Trigger: GAAAAAGAGTGTACATCTCCATCCCACTCTGAGTTG...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCATGGCTAAGCTCAGGTTaGTTTTTCTTCCGTTTCATA +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISWLSSG*FFFRFI
Trigger: TATGAAACGGAAGAAAAATCAACCTGAGCTTAGCCA...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR TCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCATTGACTGCATTCGATTaGGCTGAGTTAGTAGAATCA +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISLTAFD*AELVES
Trigger: TGATTCTACTAACTCAGCTCAATCGAATGCAGTCAA...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR GCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCATGACTTCTTTACTGTaGTTGCTGTACTATCCCACT +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIMTSLL*LLYYPT
Trigger: AGTGGGATAGTACAGCAAGCACAGTAAAGAAGTCAT...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTTACTCTCAAGTGTCTaGGTATTTCTGCTACTGAAG +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTILLSSV*VFLLLK
Trigger: CTTCAGTAGCAGAAATACCCAGACACTTGAGAGTAA...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCATTTCCTATTAGGATCTaGTGGACATCTAGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISFPIRI*WTSRGF
Trigger: AAAGCCTCTAGATGTCCACCAGATCCTAATAGGAAA...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTGTTTCATATTGGGAATaGTTTGCTTCTCTTCTACCT +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISAVSYWE*FASLLP
Trigger: AGGTAGAAGAGAAGCAAACCATTCCCAATATGAAAC...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR GCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCATATTGGGAATGGTTTaGTTCTCTTCTACCTTGACT +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIILGMV*FSSTLT
Trigger: AGTCAAGGTAGAAGAGAAGCAAACCATTCCCAATAT...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTGGTAAAGACGTATTTTaGAAATATTCTGACATGGTC +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISAGKDVF*KYSDMV
Trigger: GACCATGTCAGAATATTTCCAAAATACGTCTTTACC...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAAGATTAGTAGGACTCTaGACTGGAGTTATTGAAATG +
Preference number: 4 (lower is better)
Translates to: SIYICGKPAVSKVKPTISRLVGL*TGVIEM
Trigger: CATTTCAATAACTCCAGTCCAGAGTCCTACTAATCT...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTTCTTATTTCTTAGATTaGCATTTTCAGAACCAGGCT +
Preference number: 4 (lower is better)
Translates to: IYICGKPAVSKVKPTISASYFLD*HFQNQA
Trigger: AGCCTGGTTCTGAAAATGCCAATCTAAGAAATAAGA...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCTTCCGTTTCATATTaGGAATGGTTTGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTISSVSY*EWFASL
Trigger: AAGAGAAGCAAACCATTCCCAATATGAAACGGAAGA...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CCA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCATCTATCTATATATGTaGAAAACCAGCGGTATCCAA +
Preference number: 4 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIIYLYM*KTSGIQ
Trigger: TTGGATACCGCTGGTTTTCCACATATATAGATAGAT...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CCA 90 bp CCCTCATGTTGGATATCCAGCCATGGTTTGAGAGCTGGGAATGGCTaGCGGTTTTGGGTGTTGCTTGAGCTTCCCAGGGTCCTGGAGGAA +
Preference number: 5 (lower is better)
Translates to: PSCWISSHGLRAGNG*RFWVLLELPRVLEE
Trigger: TTCCTCCAGGACCCTGGGAAGCTCAAGCAACACCCAAAACCGCCAGCCATTCCCAGCTCTCAAACCATGGCTGGATATCCAACATGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 90 bp CTACGTGAGGCTAGAGGGTTTGGCCGCCGAGAAACATGTCGAGCTTaGGGTTGGTCCAGGGTCAGAAAGGGCAAAGGTATCAACTTGACC +
Preference number: 5 (lower is better)
Translates to: LREARGFGRRETCRA*GWSRVRKGKGINLT
Trigger: GGTCAAGTTGATACCTTTGCCCTTTCTGACCCTGGACCAACCTCAAGCTCGACATGTTTCTCGGCGGCCAAACCCTCTAGCCTCACGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CCA 90 bp TGGATATCCAGCCATGGTTTGAGAGCTGGGAATGGCTGGCGGTTTTaGGTGTTGCTTGAGCTTCCCAGGGTCCTGGAGGAAGAGAATCCA +
Preference number: 5 (lower is better)
Translates to: WISSHGLRAGNGWRF*VLLELPRVLEEENP
Trigger: TGGATTCTCTTCCTCCAGGACCCTGGGAAGCTCAAGCAACACCCAAAACCGCCAGCCATTCCCAGCTCTCAAACCATGGCTGGATATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 90 bp GAGCTTGAGGTTGGTCCAGGGTCAGAAAGGGCAAAGGTATCAACTTaGCCTTCCCAGGTGGTGGCAACTCAGAGTGGGATGGAGATGTAC +
Preference number: 5 (lower is better)
Translates to: ELEVGPGSERAKVST*PSQVVATQSGMEMY
Trigger: GTACATCTCCATCCCACTCTGAGTTGCCACCACCTGGGAAGGTCAAGTTGATACCTTTGCCCTTTCTGACCCTGGACCAACCTCAAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 90 bp GTTGGTAGGAGCTGGTCGGGATGGATTGACTGCATTCGATTGAGCTaGGTTAGTAGAATCAGGTCGAGCAGGGTAAGCCACAGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: VGRSWSGWIDCIRLS*VSRIRSSRVSHSRP
Trigger: AGGCCTGCTGTGGCTTACCCTGCTCGACCTGATTCTACTAACTCAGCTCAATCGAATGCAGTCAATCCATCCCGACCAGCTCCTACCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 90 bp TTTTCTCCGGGCCTTTACCCTCATGTTGGATATCCAGCCATGGTTTaGGAGCTGGGAATGGCTGGCGGTTTTGGGTGTTGCTTGAGCTTC +
Preference number: 5 (lower is better)
Translates to: FSPGLYPHVGYPAMV*ELGMAGGFGCCLSF
Trigger: GAAGCTCAAGCAACACCCAAAACCGCCAGCCATTCCCAGCTCTCAAACCATGGCTGGATATCCAACATGAGGGTAAAGGCCCGGAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 90 bp CTGGCTCAGGAACAGTGGGTTTCCTCCATGGACGGGGTTGGAGGCTaGAGTCTTGGATTAGAAATTGATTTTGAGGCTTGGGCAGTGACC +
Preference number: 5 (lower is better)
Translates to: LAQEQWVSSMDGVGG*SLGLEIDFEAWAVT
Trigger: GGTCACTGCCCAAGCCTCAAAATCAATTTCTAATCCAAGACTTCAGCCTCCAACCCCGTCCATGGAGGAAACCCACTGTTCCTGAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 90 bp TGCCCATGGCTCTTAGTTTTGCTGATCCTGCTGGATGCAGCCTTGTaGGGTTTGTTGCTAGAATGCTTGGCCTTGTTCACAGAAGCGCTG +
Preference number: 5 (lower is better)
Translates to: CPWLLVLLILLDAAL*GLLLECLALFTEAL
Trigger: CAGCGCTTCTGTGAACAAGGCCAAGCATTCTAGCAACAAACCTCACAAGGCTGCATCCAGCAGGATCAGCAAAACTAAGAGCCATGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CCA 90 bp CCAACAACCACTTCTCTCTCTAATAGGCACTCTGGGTTCTTTGGCTaGATTTTGGCCTTGGGAGCACCCTGGATAGGCTCGGAAGCTTTA +
Preference number: 5 (lower is better)
Translates to: PTTTSLSNRHSGFFG*ILALGAPWIGSEAL
Trigger: TAAAGCTTCCGAGCCTATCCAGGGTGCTCCCAAGGCCAAAATCCAGCCAAAGAACCCAGAGTGCCTATTAGAGAGAGAAGTGGTTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CCA 90 bp GTCCAGGGTCAGAAAGGGCAAAGGTATCAACTTGACCTTCCCAGGTaGTGGCAACTCAGAGTGGGATGGAGATGTACACTCTTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: VQGQKGQRYQLDLPR*WQLRVGWRCTLFFS
Trigger: GCTGAAAAAGAGTGTACATCTCCATCCCACTCTGAGTTGCCACCACCTGGGAAGGTCAAGTTGATACCTTTGCCCTTTCTGACCCTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CCA 90 bp CTTGGATTAGAAATTGATTTTGAGGCTTGGGCAGTGACCGGAGACTaGTCACAGCAGTGGAAACAGGCTCCCGCTGCAGAGAAGAACAAG +
Preference number: 5 (lower is better)
Translates to: LGLEIDFEAWAVTGD*SQQWKQAPAAEKNK
Trigger: CTTGTTCTTCTCTGCAGCGGGAGCCTGTTTCCACTGCTGTGACCAGTCTCCGGTCACTGCCCAAGCCTCAAAATCAATTTCTAATCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS GCA 90 bp GGTCTTTTCCTGCCCATGGCTCTTAGTTTTGCTGATCCTGCTGGATaGAGCCTTGTGAGGTTTGTTGCTAGAATGCTTGGCCTTGTTCAC +
Preference number: 5 (lower is better)
Translates to: GLFLPMALSFADPAG*SLVRFVARMLGLVH
Trigger: GTGAACAAGGCCAAGCATTCTAGCAACAAACCTCACAAGGCTGCATCCAGCAGGATCAGCAAAACTAAGAGCCATGGGCAGGAAAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CCA 90 bp CAGGGTCAGAAAGGGCAAAGGTATCAACTTGACCTTCCCAGGTGGTaGCAACTCAGAGTGGGATGGAGATGTACACTCTTTTTCAGCACT +
Preference number: 5 (lower is better)
Translates to: QGQKGQRYQLDLPRW*QLRVGWRCTLFFST
Trigger: AGTGCTGAAAAAGAGTGTACATCTCCATCCCACTCTGAGTTGCCACCACCTGGGAAGGTCAAGTTGATACCTTTGCCCTTTCTGACCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CCA 90 bp ATTGATTTTGAGGCTTGGGCAGTGACCGGAGACTGGTCACAGCAGTaGAAACAGGCTCCCGCTGCAGAGAAGAACAAGATGATGTTTTGT +
Preference number: 5 (lower is better)
Translates to: IDFEAWAVTGDWSQQ*KQAPAAEKNKMMFC
Trigger: ACAAAACATCATCTTGTTCTTCTCTGCAGCGGGAGCCTGTTTCCACTGCTGTGACCAGTCTCCGGTCACTGCCCAAGCCTCAAAATCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS GCA 90 bp ACACAGAGCCATAAGATTGCAGGCAGGATAGTTGAGGCCCCAGTGTaGCTTGATTATAGTAATAGACCTGGCTTCCTATCTGGCAGGGAA +
Preference number: 5 (lower is better)
Translates to: TQSHKIAGRIVEAPV*LDYSNRPGFLSGRE
Trigger: TTCCCTGCCAGATAGGAAGCCAGGTCTATTACTATAATCAAGGCACACTGGGGCCTCAACTATCCTGCCTGCAATCTTATGGCTCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CCA 90 bp GGACTTGGAGAATTCTGGAGTTTGTGGCAGACAAAATGTCTGGCTTaGAGATTGCAATCCCAGGGAAGTATCCATCCCCAGGGAAGTTTC +
Preference number: 5 (lower is better)
Translates to: GLGEFWSLWQTKCLA*RLQSQGSIHPQGSF
Trigger: GAAACTTCCCTGGGGATGGATACTTCCCTGGGATTGCAATCTCCAAGCCAGACATTTTGTCTGCCACAAACTCCAGAATTCTCCAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CCA 90 bp TCCTGGCTTGGAGCTGGAGACAGTGTCAAGAGATTAGTAGGACTCTaGACTGGAGTTATTGAAATGTCCCCAAGCTCAGGTGATGGGTTA +
Preference number: 5 (lower is better)
Translates to: SWLGAGDSVKRLVGL*TGVIEMSPSSGDGL
Trigger: TAACCCATCACCTGAGCTTGGGGACATTTCAATAACTCCAGTCCAGAGTCCTACTAATCTCTTGACACTGTCTCCAGCTCCAAGCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS GCA 90 bp GAGAATTCTGGAGTTTGTGGCAGACAAAATGTCTGGCTTGGAGATTaGAATCCCAGGGAAGTATCCATCCCCAGGGAAGTTTCCATCACT +
Preference number: 5 (lower is better)
Translates to: ENSGVCGRQNVWLGD*NPREVSIPREVSIT
Trigger: AGTGATGGAAACTTCCCTGGGGATGGATACTTCCCTGGGATTGCAATCTCCAAGCCAGACATTTTGTCTGCCACAAACTCCAGAATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CCA 90 bp GGCAAAGGTATCAACTTGACCTTCCCAGGTGGTGGCAACTCAGAGTaGGATGGAGATGTACACTCTTTTTCAGCACTACCATCTAGTTTC +
Preference number: 5 (lower is better)
Translates to: GKGINLTFPGGGNSE*DGDVHSFSALPSSF
Trigger: GAAACTAGATGGTAGTGCTGAAAAAGAGTGTACATCTCCATCCCACTCTGAGTTGCCACCACCTGGGAAGGTCAAGTTGATACCTTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 90 bp GCTCAGGTGATGGGTTACTCTCAAGTGTCTGGGTATTTCTGCTACTaGAGGACTTGGAGAATTCTGGAGTTTGTGGCAGACAAAATGTCT +
Preference number: 5 (lower is better)
Translates to: AQVMGYSQVSGYFCY*RTWRILEFVADKMS
Trigger: AGACATTTTGTCTGCCACAAACTCCAGAATTCTCCAAGTCCTTCAGTAGCAGAAATACCCAGACACTTGAGAGTAACCCATCACCTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 90 bp GTACACTCTTTTTCAGCACTACCATCTAGTTTCTGGGCCTTGACTTaGATTTTCTCCGGGCCTTTACCCTCATGTTGGATATCCAGCCAT +
Preference number: 5 (lower is better)
Translates to: VHSFSALPSSFWALT*IFSGPLPSCWISSH
Trigger: ATGGCTGGATATCCAACATGAGGGTAAAGGCCCGGAGAAAATTCAAGTCAAGGCCCAGAAACTAGATGGTAGTGCTGAAAAAGAGTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 90 bp GAGATGTACACTCTTTTTCAGCACTACCATCTAGTTTCTGGGCCTTaGCTTGAATTTTCTCCGGGCCTTTACCCTCATGTTGGATATCCA +
Preference number: 5 (lower is better)
Translates to: EMYTLFQHYHLVSGP*LEFSPGLYPHVGYP
Trigger: TGGATATCCAACATGAGGGTAAAGGCCCGGAGAAAATTCAAGTCAAGGCCCAGAAACTAGATGGTAGTGCTGAAAAAGAGTGTACATCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CCA 90 bp ATTGAAATGTCCCCAAGCTCAGGTGATGGGTTACTCTCAAGTGTCTaGGTATTTCTGCTACTGAAGGACTTGGAGAATTCTGGAGTTTGT +
Preference number: 5 (lower is better)
Translates to: IEMSPSSGDGLLSSV*VFLLLKDLENSGVC
Trigger: ACAAACTCCAGAATTCTCCAAGTCCTTCAGTAGCAGAAATACCCAGACACTTGAGAGTAACCCATCACCTGAGCTTGGGGACATTTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGGTTTTGGGTGTTGCTaGAGCTTCCCAGGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: SIYICGKPAVSKVKPTISGFGCC*SFPGSW
Trigger: CCAGGACCCTGGGAAGCTCAAGCAACACCCAAAACC...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCATGGCGGTTTTGGGTGTaGCTTGAGCTTCCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: SIYICGKPAVSKVKPTISWRFWV*LELPRV
Trigger: GACCCTGGGAAGCTCAAGCAACACCCAAAACCGCCA...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTGGCAAAGGTATCAACTaGACCTTCCCAGGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: IYICGKPAVSKVKPTISAGKGIN*TFPGGG
Trigger: GCCACCACCTGGGAAGGTCAAGTTGATACCTTTGCC...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGTGAGGCTAGAGGGTTaGGCCGCCGAGAAACATGTC +
Preference number: 5 (lower is better)
Translates to: SIYICGKPAVSKVKPTISVRLEG*AAEKHV
Trigger: GACATGTTTCTCGGCGGCCAAACCCTCTAGCCTCAC...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCACCTCCATGGACGGGGTaGGAGGCTGAAGTCTTGGAT +
Preference number: 5 (lower is better)
Translates to: SIYICGKPAVSKVKPTISPPWTG*EAEVLD
Trigger: ATCCAAGACTTCAGCCTCCAACCCCGTCCATGGAGG...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGGCACTCTGGGTTCTTaGGCTGGATTTTGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: SIYICGKPAVSKVKPTISGTLGS*AGFWPW
Trigger: CCAAGGCCAAAATCCAGCCAAAGAACCCAGAGTGCC...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTATATCCAGCCATGGTTaGAGAGCTGGGAATGGCTGG +
Preference number: 5 (lower is better)
Translates to: IYICGKPAVSKVKPTISAISSHG*RAGNGW
Trigger: CCAGCCATTCCCAGCTCTCAAACCATGGCTGGATAT...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCATGTCGAGCTTGAGGTaGGTCCAGGGTCAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIMSSLR*VQGQKG
Trigger: CCCTTTCTGACCCTGGACCAACCTCAAGCTCGACAT...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTCCTGTCAAAGATGTGTaGGTAGGAGCTGGTCGGGAT +
Preference number: 5 (lower is better)
Translates to: IYICGKPAVSKVKPTISAPVKDV*VGAGRD
Trigger: ATCCCGACCAGCTCCTACCAACACATCTTTGACAGG...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 90 bp ATGCTTGTTCTTCCTGACTTGATCAGAGTGACCCTTTATGACACATaGCTTTTCCTGCACCTGATTTACCTTGATGGCACTGGTATCTTT +
Preference number: 5 (lower is better)
Translates to: MLVLPDLIRVTLYDT*LFLHLIYLDGTGIF
Trigger: AAAGATACCAGTGCCATCAAGGTAAATCAGGTGCAGGAAAAGTCATGTGTCATAAAGGGTCACTCTGATCAAGTCAGGAAGAACAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS GCA 90 bp CTTCCTGTTAAGAAAGCTGCATTGCTCACCACAGGAAGAGAGAACTaGCGAGAATTTGCAGTTCCAGGTAAAGACGTATTTTGGAAATAT +
Preference number: 5 (lower is better)
Translates to: LPVKKAALLTTGREN*REFAVPGKDVFWKY
Trigger: ATATTTCCAAAATACGTCTTTACCTGGAACTGCAAATTCTCGGCAGTTCTCTCTTCCTGTGGTGAGCAATGCAGCTTTCTTAACAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTGAGGCTCTGGAGAAGTaGGAGATGCTTCCTGTTAAG +
Preference number: 5 (lower is better)
Translates to: IYICGKPAVSKVKPTISAEALEK*EMLPVK
Trigger: CTTAACAGGAAGCATCTCCAACTTCTCCAGAGCCTC...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCACTGGTGGTAGGACATTaGTGGGCTGAACCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: SIYICGKPAVSKVKPTISLVVGH*WAEPPS
Trigger: TGAAGGAGGTTCAGCCCACAAATGTCCTACCACCAG...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTCCATGGCTCTTAGTTTaGCTGATCCTGCTGGATGCA +
Preference number: 5 (lower is better)
Translates to: IYICGKPAVSKVKPTISAPWLLV*LILLDA
Trigger: TGCATCCAGCAGGATCAGCAAAACTAAGAGCCATGG...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCAGAAACATGTCGAGCTaGAGGTTGGTCCAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIRNMSS*RLVQGQ
Trigger: CTGACCCTGGACCAACCTCAAGCTCGACATGTTTCT...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTTGCTTTGGCTGAAATaGGCTGAGCTGGTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: VSIYICGKPAVSKVKPTILLWLK*AELVWQ
Trigger: CTGCCACACCAGCTCAGCCAATTTCAGCCAAAGCAA...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTCTGAACTGGGTTGGGTaGCTTTGGCTGAAATTGGCT +
Preference number: 5 (lower is better)
Translates to: IYICGKPAVSKVKPTISALNWVG*LWLKLA
Trigger: AGCCAATTTCAGCCAAAGCAACCCAACCCAGTTCAG...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTAGGCCCCAGTGTGCCTaGATTATAGTAATAGACCTG +
Preference number: 5 (lower is better)
Translates to: IYICGKPAVSKVKPTISARPQCA*IIVIDL
Trigger: CAGGTCTATTACTATAATCAAGGCACACTGGGGCCT...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTTCTGGACTGGAGTTATaGAAATGTCCCCAAGCTCAG +
Preference number: 5 (lower is better)
Translates to: IYICGKPAVSKVKPTISASGLEL*KCPQAQ
Trigger: CTGAGCTTGGGGACATTTCAATAACTCCAGTCCAGA...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTCTAGAATGCTTGGCCTaGTTCACAGAAGCGCTGTTA +
Preference number: 5 (lower is better)
Translates to: IYICGKPAVSKVKPTISALECLA*FTEALL
Trigger: TAACAGCGCTTCTGTGAACAAGGCCAAGCATTCTAG...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTTTCTTTCTGTTCCCTTaGGTCTTTTCCTGCCCATGG +
Preference number: 5 (lower is better)
Translates to: IYICGKPAVSKVKPTISAFFLFP*VFSCPW
Trigger: CCATGGGCAGGAAAAGACCAAAGGGAACAGAAAGAA...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTGCCTTTACCCTCATGTaGGATATCCAGCCATGGTTT +
Preference number: 5 (lower is better)
Translates to: IYICGKPAVSKVKPTISAAFTLM*DIQPWF
Trigger: AAACCATGGCTGGATATCCAACATGAGGGTAAAGGC...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCACCCAAAGAGGTGTATTaGGCAGCATTCTCACGCTCT +
Preference number: 5 (lower is better)
Translates to: SIYICGKPAVSKVKPTISPKEVY*AAFSRS
Trigger: AGAGCGTGAGAATGCTGCCAAATACACCTCTTTGGG...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CCA 90 bp TCTGCCAAATCACTGCTAGACTCAATCCCATTTTCAAATATCCCTTaGTCCTCAAGACTCAGGCTCTTATTTCTTAGATTGGCATTTTCA +
Preference number: 5 (lower is better)
Translates to: SAKSLLDSIPFSNIP*SSRLRLLFLRLAFS
Trigger: TGAAAATGCCAATCTAAGAAATAAGAGCCTGAGTCTTGAGGACCAAGGGATATTTGAAAATGGGATTGAGTCTAGCAGTGATTTGGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAAGTTGTGCTAGAATGTaGGTAAAGGTAGGCACTGCC +
Preference number: 5 (lower is better)
Translates to: SIYICGKPAVSKVKPTISSCARM*VKVGTA
Trigger: GGCAGTGCCTACCTTTACCAACATTCTAGCACAACT...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTCTGCTACTGAAGGACTaGGAGAATTCTGGAGTTTGT +
Preference number: 5 (lower is better)
Translates to: IYICGKPAVSKVKPTISALLLKD*ENSGVC
Trigger: ACAAACTCCAGAATTCTCCAAGTCCTTCAGTAGCAG...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAATGGCACTGGTATCTTaGGCTTTCTTTGCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: SIYICGKPAVSKVKPTISMALVS*AFFAEG
Trigger: TCCCTCAGCAAAGAAAGCCAAAGATACCAGTGCCAT...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCATTGTTGCTAGAATGCTaGGCCTTGTTCACAGAAGCG +
Preference number: 5 (lower is better)
Translates to: SIYICGKPAVSKVKPTISLLLEC*ALFTEA
Trigger: CGCTTCTGTGAACAAGGCCAAGCATTCTAGCAACAA...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTTTCTGGGCCTTGACTaGAATTTTCTCCGGGCCTTT +
Preference number: 5 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIFLGLD*NFLRAF
Trigger: AAAGGCCCGGAGAAAATTCAAGTCAAGGCCCAGAAA...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAATTCTCACGCTCTTGTaGAGCCTTTCTCTTCATGGC +
Preference number: 5 (lower is better)
Translates to: SIYICGKPAVSKVKPTISILTLL*SLSLHG
Trigger: GCCATGAAGAGAAAGGCTCAACAAGAGCGTGAGAAT...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTAGCATTCTCACGCTCTaGTTGAGCCTTTCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: IYICGKPAVSKVKPTISASILTL*LSLSLH
Trigger: ATGAAGAGAAAGGCTCAACAAGAGCGTGAGAATGCT...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCATATGGCCCTGCTGATTaGGAATTTGAGTTAGTGTCC +
Preference number: 5 (lower is better)
Translates to: SIYICGKPAVSKVKPTISYGPAD*EFELVS
Trigger: GGACACTAACTCAAATTCCAAATCAGCAGGGCCATA...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTGGAAGTTTCCATCACTaGAACACTGGTTTCTGTGAT +
Preference number: 5 (lower is better)
Translates to: IYICGKPAVSKVKPTISAGSFHH*NTGFCD
Trigger: ATCACAGAAACCAGTGTTCAAGTGATGGAAACTTCC...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCGGAGAATTCTGGAGTTaGTGGCAGACAAAATGTCTG +
Preference number: 5 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIGEFWS*WQTKCL
Trigger: CAGACATTTTGTCTGCCACAAACTCCAGAATTCTCC...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTCATATTGGGAATGGTTaGCTTCTCTTCTACCTTGAC +
Preference number: 5 (lower is better)
Translates to: IYICGKPAVSKVKPTISAHIGNG*LLFYLD
Trigger: GTCAAGGTAGAAGAGAAGCAAACCATTCCCAATATG...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAACTTCTTTACTGTGCTaGCTGTACTATCCCACTCAA +
Preference number: 5 (lower is better)
Translates to: SIYICGKPAVSKVKPTISTSLLC*LYYPTQ
Trigger: TTGAGTGGGATAGTACAGCAAGCACAGTAAAGAAGT...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCATTTTCAAATATCCCTaGGTCCTCAAGACTCAGGCT +
Preference number: 5 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIIFKYP*VLKTQA
Trigger: AGCCTGAGTCTTGAGGACCAAGGGATATTTGAAAAT...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTATCTTTGGCTTTCTTaGCTGAGGGACTTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: VSIYICGKPAVSKVKPTIYLWLS*LRDFQV
Trigger: AACCTGAAAGTCCCTCAGCAAAGAAAGCCAAAGATA...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCCTTGTTCTTCCTGACTaGATCAGAGTGACCCTTTAT +
Preference number: 5 (lower is better)
Translates to: VSIYICGKPAVSKVKPTILVLPD*IRVTLY
Trigger: ATAAAGGGTCACTCTGATCAAGTCAGGAAGAACAAG...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp ATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAGCTTTCTTCCGTTTCATATaGGGAATGGTTTGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: IYICGKPAVSKVKPTISAFFRFI*GMVCFS
Trigger: AGAGAAGCAAACCATTCCCAATATGAAACGGAAGAA...AGCTGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCCTCTTATTTCTTAGATaGGCATTTTCAGAACCAGGC +
Preference number: 5 (lower is better)
Translates to: VSIYICGKPAVSKVKPTILLFLR*AFSEPG
Trigger: GCCTGGTTCTGAAAATGCCAATCTAAGAAATAAGAG...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp GTATCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCCTTTTTAAGGGTCTTTaGGCTAAGCTCAGGTTGATT +
Preference number: 5 (lower is better)
Translates to: VSIYICGKPAVSKVKPTILFKGL*AKLRLI
Trigger: AATCAACCTGAGCTTAGCCAAAAGACCCTTAAAAAG...GATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS-3UTR CAA 90 bp TCTATCTATATATGTGGAAAACCAGCGGTATCCAAAGTAAAACCAACAATCTCAATCTCAGCTCTTAGATaGTGTAGCCATAGTATTCAG +
Preference number: 5 (lower is better)
Translates to: SIYICGKPAVSKVKPTISISALR*CSHSIQ
Trigger: CTGAATACTATGGCTACACAATCTAAGAGCTGAGAT...TGAGATTGTTGGTTTTACTTTGGATACCGCTGGTTTTCCACATATATAGATAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CAA 90 bp GTCGAGCAGGGTAAGCCACAGCAGGCCTACGTGAGGCTAGAGGGTTaGGCCGCCGAGAAACATGTCGAGCTTGAGGTTGGTCCAGGGTCA +
Preference number: 6 (lower is better)
Translates to: VEQGKPQQAYVRLEG*AAEKHVELEVGPGS
Trigger: TGACCCTGGACCAACCTCAAGCTCGACATGTTTCTCGGCGGCCAAACCCTCTAGCCTCACGTAGGCCTGCTGTGGCTTACCCTGCTCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CCA 72 bp GAGGCTTGGGCAGTGACCGGAGACTGGTCACAGCAGTaGAAACAGGCTCCCGCTGCAGAGAAGAACAAGATG +
Preference number: 6 (lower is better)
Translates to: EAWAVTGDWSQQ*KQAPAAEKNKM
Trigger: CATCTTGTTCTTCTCTGCAGCGGGAGCCTGTTTCCACTGCTGTGACCAGTCTCCGGTCACTGCCCAAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CAA 72 bp GGTAAGCCACAGCAGGCCTACGTGAGGCTAGAGGGTTaGGCCGCCGAGAAACATGTCGAGCTTGAGGTTGGT +
Preference number: 6 (lower is better)
Translates to: GKPQQAYVRLEG*AAEKHVELEVG
Trigger: ACCAACCTCAAGCTCGACATGTTTCTCGGCGGCCAAACCCTCTAGCCTCACGTAGGCCTGCTGTGGCTTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CCA 72 bp AGCCATGGTTTGAGAGCTGGGAATGGCTGGCGGTTTTaGGTGTTGCTTGAGCTTCCCAGGGTCCTGGAGGAA +
Preference number: 6 (lower is better)
Translates to: SHGLRAGNGWRF*VLLELPRVLEE
Trigger: TTCCTCCAGGACCCTGGGAAGCTCAAGCAACACCCAAAACCGCCAGCCATTCCCAGCTCTCAAACCATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 72 bp GCTAGAGGGTTTGGCCGCCGAGAAACATGTCGAGCTTaGGGTTGGTCCAGGGTCAGAAAGGGCAAAGGTATC +
Preference number: 6 (lower is better)
Translates to: ARGFGRRETCRA*GWSRVRKGKGI
Trigger: GATACCTTTGCCCTTTCTGACCCTGGACCAACCTCAAGCTCGACATGTTTCTCGGCGGCCAAACCCTCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CCA 72 bp TGGATATCCAGCCATGGTTTGAGAGCTGGGAATGGCTaGCGGTTTTGGGTGTTGCTTGAGCTTCCCAGGGTC +
Preference number: 6 (lower is better)
Translates to: WISSHGLRAGNG*RFWVLLELPRV
Trigger: GACCCTGGGAAGCTCAAGCAACACCCAAAACCGCCAGCCATTCCCAGCTCTCAAACCATGGCTGGATATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CCA 72 bp CTCCGGGCCTTTACCCTCATGTTGGATATCCAGCCATaGTTTGAGAGCTGGGAATGGCTGGCGGTTTTGGGT +
Preference number: 6 (lower is better)
Translates to: LRAFTLMLDIQP*FESWEWLAVLG
Trigger: ACCCAAAACCGCCAGCCATTCCCAGCTCTCAAACCATGGCTGGATATCCAACATGAGGGTAAAGGCCCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CCA 72 bp GAAATTGATTTTGAGGCTTGGGCAGTGACCGGAGACTaGTCACAGCAGTGGAAACAGGCTCCCGCTGCAGAG +
Preference number: 6 (lower is better)
Translates to: EIDFEAWAVTGD*SQQWKQAPAAE
Trigger: CTCTGCAGCGGGAGCCTGTTTCCACTGCTGTGACCAGTCTCCGGTCACTGCCCAAGCCTCAAAATCAATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CAA 72 bp GGTTTGAGAGCTGGGAATGGCTGGCGGTTTTGGGTGTaGCTTGAGCTTCCCAGGGTCCTGGAGGAAGAGAAT +
Preference number: 6 (lower is better)
Translates to: GLRAGNGWRFWV*LELPRVLEEEN
Trigger: ATTCTCTTCCTCCAGGACCCTGGGAAGCTCAAGCAACACCCAAAACCGCCAGCCATTCCCAGCTCTCAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CAA 90 bp TCCAGCCATGGTTTGAGAGCTGGGAATGGCTGGCGGTTTTGGGTGTaGCTTGAGCTTCCCAGGGTCCTGGAGGAAGAGAATCCAGTTTTC +
Preference number: 6 (lower is better)
Translates to: SSHGLRAGNGWRFWV*LELPRVLEEENPVF
Trigger: GAAAACTGGATTCTCTTCCTCCAGGACCCTGGGAAGCTCAAGCAACACCCAAAACCGCCAGCCATTCCCAGCTCTCAAACCATGGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 72 bp GGCCTTTACCCTCATGTTGGATATCCAGCCATGGTTTaGGAGCTGGGAATGGCTGGCGGTTTTGGGTGTTGC +
Preference number: 6 (lower is better)
Translates to: GLYPHVGYPAMV*ELGMAGGFGCC
Trigger: GCAACACCCAAAACCGCCAGCCATTCCCAGCTCTCAAACCATGGCTGGATATCCAACATGAGGGTAAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 72 bp GTTGGTCCAGGGTCAGAAAGGGCAAAGGTATCAACTTaGCCTTCCCAGGTGGTGGCAACTCAGAGTGGGATG +
Preference number: 6 (lower is better)
Translates to: VGPGSERAKVST*PSQVVATQSGM
Trigger: CATCCCACTCTGAGTTGCCACCACCTGGGAAGGTCAAGTTGATACCTTTGCCCTTTCTGACCCTGGACCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CAA 72 bp GGGCCTTTACCCTCATGTTGGATATCCAGCCATGGTTaGAGAGCTGGGAATGGCTGGCGGTTTTGGGTGTTG +
Preference number: 6 (lower is better)
Translates to: GPLPSCWISSHG*RAGNGWRFWVL
Trigger: CAACACCCAAAACCGCCAGCCATTCCCAGCTCTCAAACCATGGCTGGATATCCAACATGAGGGTAAAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CAA 72 bp GGTTGGCTGAACTGGGTTGGGTTGCTTTGGCTGAAATaGGCTGAGCTGGTGTGGCAGGACCTGTCAAAGATG +
Preference number: 6 (lower is better)
Translates to: GWLNWVGLLWLK*AELVWQDLSKM
Trigger: CATCTTTGACAGGTCCTGCCACACCAGCTCAGCCAATTTCAGCCAAAGCAACCCAACCCAGTTCAGCCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CAA 90 bp ATGGCTCTGGCCAGTAACCCCAGACAACATAGTTGTGCTAGAATGTaGGTAAAGGTAGGCACTGCCCATGAGTGGCTGGAAGGAGGTGCC +
Preference number: 6 (lower is better)
Translates to: MALASNPRQHSCARM*VKVGTAHEWLEGGA
Trigger: GGCACCTCCTTCCAGCCACTCATGGGCAGTGCCTACCTTTACCAACATTCTAGCACAACTATGTTGTCTGGGGTTACTGGCCAGAGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 72 bp GCTGAACTGGGTTGGGTTGCTTTGGCTGAAATTGGCTaGGCTGGTGTGGCAGGACCTGTCAAAGATGTGTTG +
Preference number: 6 (lower is better)
Translates to: AELGWVALAEIG*AGVAGPVKDVL
Trigger: CAACACATCTTTGACAGGTCCTGCCACACCAGCTCAGCCAATTTCAGCCAAAGCAACCCAACCCAGTTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CAA 72 bp AGGGTTTGGCCGCCGAGAAACATGTCGAGCTTGAGGTaGGTCCAGGGTCAGAAAGGGCAAAGGTATCAACTT +
Preference number: 6 (lower is better)
Translates to: RVWPPRNMSSLR*VQGQKGQRYQL
Trigger: AAGTTGATACCTTTGCCCTTTCTGACCCTGGACCAACCTCAAGCTCGACATGTTTCTCGGCGGCCAAACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CAA 90 bp GGCTTCCTATCTGGCAGGGAAGTGACAGGTTATGGCCCTGCTGATTaGGAATTTGAGTTAGTGTCCCCTGAACAAGGCTGGCAGATAGTG +
Preference number: 6 (lower is better)
Translates to: GFLSGREVTGYGPAD*EFELVSPEQGWQIV
Trigger: CACTATCTGCCAGCCTTGTTCAGGGGACACTAACTCAAATTCCAAATCAGCAGGGCCATAACCTGTCACTTCCCTGCCAGATAGGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CAA 90 bp ACCACTTCTCTCTCTAATAGGCACTCTGGGTTCTTTGGCTGGATTTaGGCCTTGGGAGCACCCTGGATAGGCTCGGAAGCTTTATGCTTG +
Preference number: 6 (lower is better)
Translates to: TTSLSNRHSGFFGWI*ALGAPWIGSEALCL
Trigger: CAAGCATAAAGCTTCCGAGCCTATCCAGGGTGCTCCCAAGGCCAAAATCCAGCCAAAGAACCCAGAGTGCCTATTAGAGAGAGAAGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CAA 90 bp ATTTTCTCCGGGCCTTTACCCTCATGTTGGATATCCAGCCATGGTTaGAGAGCTGGGAATGGCTGGCGGTTTTGGGTGTTGCTTGAGCTT +
Preference number: 6 (lower is better)
Translates to: IFSGPLPSCWISSHG*RAGNGWRFWVLLEL
Trigger: AAGCTCAAGCAACACCCAAAACCGCCAGCCATTCCCAGCTCTCAAACCATGGCTGGATATCCAACATGAGGGTAAAGGCCCGGAGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CAA 90 bp TTTCTGGGCCTTGACTTGAATTTTCTCCGGGCCTTTACCCTCATGTaGGATATCCAGCCATGGTTTGAGAGCTGGGAATGGCTGGCGGTT +
Preference number: 6 (lower is better)
Translates to: FLGLDLNFLRAFTLM*DIQPWFESWEWLAV
Trigger: AACCGCCAGCCATTCCCAGCTCTCAAACCATGGCTGGATATCCAACATGAGGGTAAAGGCCCGGAGAAAATTCAAGTCAAGGCCCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 72 bp TCTTGGCCAAGAGGATCAATGCAGGCCAGAAGCGGGTaGATATCGGGGATTTCTACAGGAAGTAGTGGAGGA +
Preference number: 6 (lower is better)
Translates to: SWPRGSMQARSG*ISGISTGSSGG
Trigger: TCCTCCACTACTTCCTGTAGAAATCCCCGATATTCACCCGCTTCTGGCCTGCATTGATCCTCTTGGCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 72 bp AGCTGGTCGGGATGGATTGACTGCATTCGATTGAGCTaGGTTAGTAGAATCAGGTCGAGCAGGGTAAGCCAC +
Preference number: 6 (lower is better)
Translates to: SWSGWIDCIRLS*VSRIRSSRVSH
Trigger: GTGGCTTACCCTGCTCGACCTGATTCTACTAACTCAGCTCAATCGAATGCAGTCAATCCATCCCGACCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 72 bp AAAGAGGTGTATTTGGCAGCATTCTCACGCTCTTGTTaGGCCTTTCTCTTCATGGCCTCACGCTCTGGCCTC +
Preference number: 6 (lower is better)
Translates to: KEVYLAAFSRSC*AFLFMASRSGL
Trigger: GAGGCCAGAGCGTGAGGCCATGAAGAGAAAGGCTCAACAAGAGCGTGAGAATGCTGCCAAATACACCTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS GCA 72 bp CTGCCCATGGCTCTTAGTTTTGCTGATCCTGCTGGATaGAGCCTTGTGAGGTTTGTTGCTAGAATGCTTGGC +
Preference number: 6 (lower is better)
Translates to: LPMALSFADPAG*SLVRFVARMLG
Trigger: GCCAAGCATTCTAGCAACAAACCTCACAAGGCTGCATCCAGCAGGATCAGCAAAACTAAGAGCCATGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CCA 72 bp CAGAAAGGGCAAAGGTATCAACTTGACCTTCCCAGGTaGTGGCAACTCAGAGTGGGATGGAGATGTACACTC +
Preference number: 6 (lower is better)
Translates to: QKGQRYQLDLPR*WQLRVGWRCTL
Trigger: GAGTGTACATCTCCATCCCACTCTGAGTTGCCACCACCTGGGAAGGTCAAGTTGATACCTTTGCCCTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CAA 72 bp TCTGGCAGGGAAGTGACAGGTTATGGCCCTGCTGATTaGGAATTTGAGTTAGTGTCCCCTGAACAAGGCTGG +
Preference number: 6 (lower is better)
Translates to: SGREVTGYGPAD*EFELVSPEQGW
Trigger: CCAGCCTTGTTCAGGGGACACTAACTCAAATTCCAAATCAGCAGGGCCATAACCTGTCACTTCCCTGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CAA 72 bp CAAAGAGGTGTATTTGGCAGCATTCTCACGCTCTTGTaGAGCCTTTCTCTTCATGGCCTCACGCTCTGGCCT +
Preference number: 6 (lower is better)
Translates to: QRGVFGSILTLL*SLSLHGLTLWP
Trigger: AGGCCAGAGCGTGAGGCCATGAAGAGAAAGGCTCAACAAGAGCGTGAGAATGCTGCCAAATACACCTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS GCA 72 bp GGAGTTTGTGGCAGACAAAATGTCTGGCTTGGAGATTaGAATCCCAGGGAAGTATCCATCCCCAGGGAAGTT +
Preference number: 6 (lower is better)
Translates to: GVCGRQNVWLGD*NPREVSIPREV
Trigger: AACTTCCCTGGGGATGGATACTTCCCTGGGATTGCAATCTCCAAGCCAGACATTTTGTCTGCCACAAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CCA 72 bp CTGTTCTTTCTGTTCCCTTTGGTCTTTTCCTGCCCATaGCTCTTAGTTTTGCTGATCCTGCTGGATGCAGCC +
Preference number: 6 (lower is better)
Translates to: LFFLFPLVFSCP*LLVLLILLDAA
Trigger: GGCTGCATCCAGCAGGATCAGCAAAACTAAGAGCCATGGGCAGGAAAAGACCAAAGGGAACAGAAAGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CAA 72 bp GCCAGTAACCCCAGACAACATAGTTGTGCTAGAATGTaGGTAAAGGTAGGCACTGCCCATGAGTGGCTGGAA +
Preference number: 6 (lower is better)
Translates to: ASNPRQHSCARM*VKVGTAHEWLE
Trigger: TTCCAGCCACTCATGGGCAGTGCCTACCTTTACCAACATTCTAGCACAACTATGTTGTCTGGGGTTACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CAA 90 bp GGAGAATTCTGGAGTTTGTGGCAGACAAAATGTCTGGCTTGGAGATaGCAATCCCAGGGAAGTATCCATCCCCAGGGAAGTTTCCATCAC +
Preference number: 6 (lower is better)
Translates to: GEFWSLWQTKCLAWR*QSQGSIHPQGSFHH
Trigger: GTGATGGAAACTTCCCTGGGGATGGATACTTCCCTGGGATTGCAATCTCCAAGCCAGACATTTTGTCTGCCACAAACTCCAGAATTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 72 bp GAACAGTGGGTTTCCTCCATGGACGGGGTTGGAGGCTaGAGTCTTGGATTAGAAATTGATTTTGAGGCTTGG +
Preference number: 6 (lower is better)
Translates to: EQWVSSMDGVGG*SLGLEIDFEAW
Trigger: CCAAGCCTCAAAATCAATTTCTAATCCAAGACTTCAGCCTCCAACCCCGTCCATGGAGGAAACCCACTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CCA 72 bp GGCGGTTTTGGGTGTTGCTTGAGCTTCCCAGGGTCCTaGAGGAAGAGAATCCAGTTTTCATATCGATCTTTT +
Preference number: 6 (lower is better)
Translates to: GGFGCCLSFPGS*RKRIQFSYRSF
Trigger: AAAAGATCGATATGAAAACTGGATTCTCTTCCTCCAGGACCCTGGGAAGCTCAAGCAACACCCAAAACCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CCA 72 bp ATCAACTTGACCTTCCCAGGTGGTGGCAACTCAGAGTaGGATGGAGATGTACACTCTTTTTCAGCACTACCA +
Preference number: 6 (lower is better)
Translates to: INLTFPGGGNSE*DGDVHSFSALP
Trigger: TGGTAGTGCTGAAAAAGAGTGTACATCTCCATCCCACTCTGAGTTGCCACCACCTGGGAAGGTCAAGTTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CCA 72 bp AAAGGGCAAAGGTATCAACTTGACCTTCCCAGGTGGTaGCAACTCAGAGTGGGATGGAGATGTACACTCTTT +
Preference number: 6 (lower is better)
Translates to: KGQRYQLDLPRW*QLRVGWRCTLF
Trigger: AAAGAGTGTACATCTCCATCCCACTCTGAGTTGCCACCACCTGGGAAGGTCAAGTTGATACCTTTGCCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CAA 72 bp CTTGACTTGAATTTTCTCCGGGCCTTTACCCTCATGTaGGATATCCAGCCATGGTTTGAGAGCTGGGAATGG +
Preference number: 6 (lower is better)
Translates to: LDLNFLRAFTLM*DIQPWFESWEW
Trigger: CCATTCCCAGCTCTCAAACCATGGCTGGATATCCAACATGAGGGTAAAGGCCCGGAGAAAATTCAAGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CAA 90 bp AGGACTTGGAGAATTCTGGAGTTTGTGGCAGACAAAATGTCTGGCTaGGAGATTGCAATCCCAGGGAAGTATCCATCCCCAGGGAAGTTT +
Preference number: 6 (lower is better)
Translates to: RTWRILEFVADKMSG*EIAIPGKYPSPGKF
Trigger: AAACTTCCCTGGGGATGGATACTTCCCTGGGATTGCAATCTCCAAGCCAGACATTTTGTCTGCCACAAACTCCAGAATTCTCCAAGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CAA 90 bp TGTCTGGGTATTTCTGCTACTGAAGGACTTGGAGAATTCTGGAGTTaGTGGCAGACAAAATGTCTGGCTTGGAGATTGCAATCCCAGGGA +
Preference number: 6 (lower is better)
Translates to: CLGISATEGLGEFWS*WQTKCLAWRLQSQG
Trigger: TCCCTGGGATTGCAATCTCCAAGCCAGACATTTTGTCTGCCACAAACTCCAGAATTCTCCAAGTCCTTCAGTAGCAGAAATACCCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 72 bp CTCTTAGTTTTGCTGATCCTGCTGGATGCAGCCTTGTaGGGTTTGTTGCTAGAATGCTTGGCCTTGTTCACA +
Preference number: 6 (lower is better)
Translates to: LLVLLILLDAAL*GLLLECLALFT
Trigger: TGTGAACAAGGCCAAGCATTCTAGCAACAAACCTCACAAGGCTGCATCCAGCAGGATCAGCAAAACTAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS GCA 72 bp CTCTTATTTCTTAGATTGGCATTTTCAGAACCAGGCTaGTCCTCTTGGCCAAGAGGATCAATGCAGGCCAGA +
Preference number: 6 (lower is better)
Translates to: LLFLRLAFSEPG*SSWPRGSMQAR
Trigger: TCTGGCCTGCATTGATCCTCTTGGCCAAGAGGAGCAGCCTGGTTCTGAAAATGCCAATCTAAGAAATAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS GCA 72 bp TTCATATCGATCTTTTTCCCGAGTGCATGGAAAACTTaGACGGACTCTAGCATGTGCATGCCTAGGGAGCTT +
Preference number: 6 (lower is better)
Translates to: FISIFFPSAWKT*TDSSMCMPREL
Trigger: AAGCTCCCTAGGCATGCACATGCTAGAGTCCGTGCAAGTTTTCCATGCACTCGGGAAAAAGATCGATATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CCA 72 bp TCCCCAAGCTCAGGTGATGGGTTACTCTCAAGTGTCTaGGTATTTCTGCTACTGAAGGACTTGGAGAATTCT +
Preference number: 6 (lower is better)
Translates to: SPSSGDGLLSSV*VFLLLKDLENS
Trigger: AGAATTCTCCAAGTCCTTCAGTAGCAGAAATACCCAGACACTTGAGAGTAACCCATCACCTGAGCTTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CCA 72 bp CTTGGTCCTCAAGACTCAGGCTCTTATTTCTTAGATTaGCATTTTCAGAACCAGGCTGCTCCTCTTGGCCAA +
Preference number: 6 (lower is better)
Translates to: LGPQDSGSYFLD*HFQNQAAPLGQ
Trigger: TTGGCCAAGAGGAGCAGCCTGGTTCTGAAAATGCCAATCTAAGAAATAAGAGCCTGAGTCTTGAGGACCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 72 bp ATAGTAATAGACCTGGCTTCCTATCTGGCAGGGAAGTaGCAGGTTATGGCCCTGCTGATTTGGAATTTGAGT +
Preference number: 6 (lower is better)
Translates to: IVIDLASYLAGK*QVMALLIWNLS
Trigger: ACTCAAATTCCAAATCAGCAGGGCCATAACCTGTCACTTCCCTGCCAGATAGGAAGCCAGGTCTATTACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 72 bp CCAGGGAAGTTTCCATCACTTGAACACTGGTTTCTGTaGTGGGTTGAGAAGACACAGAGTAATACATCCCAG +
Preference number: 6 (lower is better)
Translates to: PGKFPSLEHWFL*WVEKTQSNTSQ
Trigger: CTGGGATGTATTACTCTGTGTCTTCTCAACCCATCACAGAAACCAGTGTTCAAGTGATGGAAACTTCCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 72 bp ATGGGTTACTCTCAAGTGTCTGGGTATTTCTGCTACTaGAGGACTTGGAGAATTCTGGAGTTTGTGGCAGAC +
Preference number: 6 (lower is better)
Translates to: MGYSQVSGYFCY*RTWRILEFVAD
Trigger: GTCTGCCACAAACTCCAGAATTCTCCAAGTCCTTCAGTAGCAGAAATACCCAGACACTTGAGAGTAACCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS GCA 72 bp CATAAGATTGCAGGCAGGATAGTTGAGGCCCCAGTGTaGCTTGATTATAGTAATAGACCTGGCTTCCTATCT +
Preference number: 6 (lower is better)
Translates to: HKIAGRIVEAPV*LDYSNRPGFLS
Trigger: AGATAGGAAGCCAGGTCTATTACTATAATCAAGGCACACTGGGGCCTCAACTATCCTGCCTGCAATCTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS GCA 72 bp GGGGAGGTAAGTATCCTCCACCCATGTAGTGATGTCTaGCAAATCACTGCTAGACTCAATCCCATTTTCAAA +
Preference number: 6 (lower is better)
Translates to: GEVSILHPCSDV*QITARLNPIFK
Trigger: TTTGAAAATGGGATTGAGTCTAGCAGTGATTTGGCAGACATCACTACATGGGTGGAGGATACTTACCTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 72 bp ATATCGGGGATTTCTACAGGAAGTAGTGGAGGATCTTaGTTTCCTATTAGGATCTGGTGGACATCTAGAGGC +
Preference number: 6 (lower is better)
Translates to: ISGISTGSSGGS*FPIRIWWTSRG
Trigger: GCCTCTAGATGTCCACCAGATCCTAATAGGAAATCAAGATCCTCCACTACTTCCTGTAGAAATCCCCGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 72 bp CTTCCTGACTTGATCAGAGTGACCCTTTATGACACATaGCTTTTCCTGCACCTGATTTACCTTGATGGCACT +
Preference number: 6 (lower is better)
Translates to: LPDLIRVTLYDT*LFLHLIYLDGT
Trigger: AGTGCCATCAAGGTAAATCAGGTGCAGGAAAAGTCATGTGTCATAAAGGGTCACTCTGATCAAGTCAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 72 bp TTTTCAGCACTACCATCTAGTTTCTGGGCCTTGACTTaGATTTTCTCCGGGCCTTTACCCTCATGTTGGATA +
Preference number: 6 (lower is better)
Translates to: FSALPSSFWALT*IFSGPLPSCWI
Trigger: TATCCAACATGAGGGTAAAGGCCCGGAGAAAATTCAAGTCAAGGCCCAGAAACTAGATGGTAGTGCTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS TCA 72 bp ACTCTTTTTCAGCACTACCATCTAGTTTCTGGGCCTTaGCTTGAATTTTCTCCGGGCCTTTACCCTCATGTT +
Preference number: 6 (lower is better)
Translates to: TLFQHYHLVSGP*LEFSPGLYPHV
Trigger: AACATGAGGGTAAAGGCCCGGAGAAAATTCAAGTCAAGGCCCAGAAACTAGATGGTAGTGCTGAAAAAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS GCA 72 bp AAGAAAGCTGCATTGCTCACCACAGGAAGAGAGAACTaGCGAGAATTTGCAGTTCCAGGTAAAGACGTATTT +
Preference number: 6 (lower is better)
Translates to: KKAALLTTGREN*REFAVPGKDVF
Trigger: AAATACGTCTTTACCTGGAACTGCAAATTCTCGGCAGTTCTCTCTTCCTGTGGTGAGCAATGCAGCTTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CAA 90 bp AGAAAGCTGCATTGCTCACCACAGGAAGAGAGAACTGCCGAGAATTaGCAGTTCCAGGTAAAGACGTATTTTGGAAATATTCTGACATGG +
Preference number: 6 (lower is better)
Translates to: RKLHCSPQEERTAEN*QFQVKTYFGNILTW
Trigger: CCATGTCAGAATATTTCCAAAATACGTCTTTACCTGGAACTGCAAATTCTCGGCAGTTCTCTCTTCCTGTGGTGAGCAATGCAGCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CCA 72 bp TCACTGCTAGACTCAATCCCATTTTCAAATATCCCTTaGTCCTCAAGACTCAGGCTCTTATTTCTTAGATTG +
Preference number: 6 (lower is better)
Translates to: SLLDSIPFSNIP*SSRLRLLFLRL
Trigger: CAATCTAAGAAATAAGAGCCTGAGTCTTGAGGACCAAGGGATATTTGAAAATGGGATTGAGTCTAGCAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1
CDS CAA 72 bp GTATCCAAAGTAAAACCAACAATCTCAGCTCTTAGATaGTGTAGCCATAGTATTCAGCAATTTCCATATCTC +
Preference number: 6 (lower is better)
Translates to: VSKVKPTISALR*CSHSIQQFPYL
Trigger: GAGATATGGAAATTGCTGAATACTATGGCTACACAATCTAAGAGCTGAGATTGTTGGTTTTACTTTGGATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409561.1