RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C2ORF73 (Homo sapiens)

Ensembl gene IDs: ENSG00000177994

Ensembl transcript IDs: ENST00000317627.5, ENST00000398634.7, ENST00000405749.5, ENST00000414747.5, ENST00000447328.5, ENST00000486488.5, ENST00000491538.1, ENST00000615983.1

Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAGGCCTTAGTTCCTTGCCATGTGGCCCTCTCCACTGGGCTGATTaGGTGTCATTACAACATGGCCATAGGCTTCCCACAGAGCCAGTC +
Preference number: 1 (lower is better)
Translates to: GGLSSLPCGPLHWAD*VSLQHGHRLPTEPV
Trigger: GACTGGCTCTGTGGGAAGCCTATGGCCATGTTGTAATGACACTCAATCAGCCCAGTGGAGAGGGCCACATGGCAAGGAACTAAGGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
3UTR GCA 90 bp AGGTCTCAGTTCTTTGCTGGCTGTTGGTGGGAGGCCTTAGTTCCTTaGCATGTGGCCCTCTCCACTGGGCTGATTGAGTGTCATTACAAC +
Preference number: 1 (lower is better)
Translates to: RSQFFAGCWWEALVP*HVALSTGLIECHYN
Trigger: GTTGTAATGACACTCAATCAGCCCAGTGGAGAGGGCCACATGGCAAGGAACTAAGGCCTCCCACCAACAGCCAGCAAAGAACTGAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
3UTR TCA 90 bp GAGGTTAAGTTACTTACCCAAGGTCACACAGCTCAAGGAATGAAGTaGAGCCAACATTCCAACTCTAGTTTGTTTGATTCCAAAGCTGTC +
Preference number: 1 (lower is better)
Translates to: EVKLLTQGHTAQGMK*SQHSNSSLFDSKAV
Trigger: GACAGCTTTGGAATCAAACAAACTAGAGTTGGAATGTTGGCTTCACTTCATTCCTTGAGCTGTGTGACCTTGGGTAAGTAACTTAACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
3UTR-3UTR CCA 90 bp ACAGCTCCTGAGAATTTTGTTGGCAGAGACCTGGTGAGATCATTCTGCTTTCCGCCGTGTCTCTTTCCCTaGAGAGGCTCATTCGGAGTT +
Preference number: 2 (lower is better)
Translates to: TAPENFVGRDLVRSFCFPPCLFP*RGSFGV
Trigger: AACTCCGAATGAGCCTCTCCAGGGAAAGAGACACGG...CGGAAAGCAGAATGATCTCACCAGGTCTCTGCCAACAAAATTCTCAGGAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317627.5
3UTR-3UTR CCA 90 bp ATGACTGTAGGCAGAAGGTCTCAGTTCTTTGCTGGCTGTTGGTGGGAGGCCTTATTTCTTCCTGCACTGTaGCACAGGACCACTGTTACA +
Preference number: 2 (lower is better)
Translates to: MTVGRRSQFFAGCWWEALFLPAL*HRTTVT
Trigger: TGTAACAGTGGTCCTGTGCCACAGTGCAGGAAGAAA...TAAGGCCTCCCACCAACAGCCAGCAAAGAACTGAGACCTTCTGCCTACAGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414747.5
3UTR-3UTR TCA 90 bp GAATTTTGTTGGCAGAGACCTGGTGAGATCATTCTGCTTTCCGCTGAGTTTCCTGTTTTGAAGTTCTGCTaGTGTACCAGGAGAGGCAAG +
Preference number: 2 (lower is better)
Translates to: EFCWQRPGEIILLSAEFPVLKFC*CTRRGK
Trigger: CTTGCCTCTCCTGGTACATCAGCAGAACTTCAAAAC...AGGAAACTCAGCGGAAAGCAGAATGATCTCACCAGGTCTCTGCCAACAAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317627.5
3UTR-3UTR GCA 90 bp ACAGCTCCTGAGAATTTTGTTGGCAGAGACCTGGTGAGATCATTCTGCTTTCCGGAACTGTTGGCCTACTaGCTGGTTTTATCTCTCTCT +
Preference number: 2 (lower is better)
Translates to: TAPENFVGRDLVRSFCFPELLAY*LVLSLS
Trigger: AGAGAGAGATAAAACCAGGCAGTAGGCCAACAGTTC...CGGAAAGCAGAATGATCTCACCAGGTCTCTGCCAACAAAATTCTCAGGAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317627.5
3UTR-3UTR GCA 90 bp TTAGTTCCTTGCCATGTGGCCCTCTCCACTGGGCTGATTGAGTGTCATTACAACTCAAGGTTTCATCTCTaGTCCTTTAGGAACTGTTGG +
Preference number: 2 (lower is better)
Translates to: LVPCHVALSTGLIECHYNSRFHL*SFRNCW
Trigger: CCAACAGTTCCTAAAGGAGCAGAGATGAAACCTTGA...GTTGTAATGACACTCAATCAGCCCAGTGGAGAGGGCCACATGGCAAGGAACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414747.5
3UTR-3UTR GCA 90 bp GCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCCACTGAGGTCTTTTCTCTaGTCTCAGGAGTGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: AHQTHQIGSRINPYQTHPLRSFL*SQECWG
Trigger: GCCCCAGCACTCCTGAGAGCAGAGAAAAGACCTCAG...TGGATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317627.5
3UTR-3UTR CCA 90 bp ACAGCTCCTGAGAATTTTGTTGGCAGAGACCTGGTGAGATCATTCTGCTTTCCGTCCTTTAGGAACTGTTaGCCTACTGCCTGGTTTTAT +
Preference number: 2 (lower is better)
Translates to: TAPENFVGRDLVRSFCFPSFRNC*PTAWFY
Trigger: ATAAAACCAGGCAGTAGGCCAACAGTTCCTAAAGGA...CGGAAAGCAGAATGATCTCACCAGGTCTCTGCCAACAAAATTCTCAGGAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317627.5
3UTR-3UTR TCA 90 bp GCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCCATTGGCAGAGACCTGGTaGGATCATTCTGCTTTCCGC +
Preference number: 2 (lower is better)
Translates to: AHQTHQIGSRINPYQTHPLAETW*DHSAFR
Trigger: GCGGAAAGCAGAATGATCTCACCAGGTCTCTGCCAA...TGGATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317627.5
3UTR-3UTR TCA 90 bp GCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCCATCTCCTACAGTTGTTTaGGTGGCGCCTGAGGTCTTT +
Preference number: 2 (lower is better)
Translates to: AHQTHQIGSRINPYQTHPSPTVV*VAPEVF
Trigger: AAAGACCTCAGGCGCCACTCAAACAACTGTAGGAGA...TGGATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317627.5
3UTR-3UTR TCA 90 bp GAAGTAGAATTAATCCTTACCAAACTCATCCAAAAAGCAAAGGTTGAGTTGGTGCCTTGGCTGCCTGTCTaGCGTCTGTTTCTGATAAGT +
Preference number: 2 (lower is better)
Translates to: EVELILTKLIQKAKVELVPWLPV*RLFLIS
Trigger: ACTTATCAGAAACAGACGTCAGACAGGCAGCCAAGG...CACCAACTCAACCTTTGCTTTTTGGATGAGTTTGGTAAGGATTAATTCTACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317627.5
3UTR-3UTR TCA 90 bp CACTTACTGATCAATGTGCATAATCACATCCTCAATAATCTTACGAAGTTGCTATGTTTGAGTGGCGCCTaGGGTCTTTTCTCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: HLLINVHNHILNNLTKLLCLSGA*GLFSAL
Trigger: GAGAGCAGAGAAAAGACCTCAGGCGCCACTCAAACA...TAGCAACTTCGTAAGATTATTGAGGATGTGATTATGCACATTGATCAGTAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317627.5
3UTR-3UTR CCA 90 bp TGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCTGTTGGCCTACTGCCTaGTTTTATCTCTCTCTGTAC +
Preference number: 2 (lower is better)
Translates to: WHTKHTKLEVELILTKLICWPTA*FYLSLY
Trigger: GTACAGAGAGAGATAAAACCAGGCAGTAGGCCAACA...GATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317627.5
3UTR-3UTR TCA 90 bp GCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCCACATTCTGCTTTCCGCTaGGTTTCCTTTCTCTGTTTT +
Preference number: 2 (lower is better)
Translates to: AHQTHQIGSRINPYQTHPHSAFR*VSFLCF
Trigger: AAAACAGAGAAAGGAAACTCAGCGGAAAGCAGAATG...TGGATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317627.5
3UTR-3UTR GCA 90 bp GCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCCAGGATTTAAAGGCTTGTaGCTAGTGAAAAGAGCATCT +
Preference number: 2 (lower is better)
Translates to: AHQTHQIGSRINPYQTHPGFKGL*LVKRAS
Trigger: AGATGCTCTTTTCACTAGGCACAAGCCTTTAAATCC...TGGATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317627.5
3UTR-3UTR CCA 90 bp TGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCTCTCACTCCACTTATTaGAGACCACTCTTATTAATA +
Preference number: 2 (lower is better)
Translates to: WHTKHTKLEVELILTKLISHSTY*RPLLLI
Trigger: TATTAATAAGAGTGGTCTCCAATAAGTGGAGTGAGA...GATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
3UTR-3UTR GCA 90 bp ATTTTGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTTACGATCATGTGTTGTaGAAAACAAAGTTGTGTTCA +
Preference number: 2 (lower is better)
Translates to: ILAHQTHQIGSRINPYQTYDHVL*KTKLCS
Trigger: TGAACACAACTTTGTTTTGCACAACACATGATCGTA...AGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCAAAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317627.5
ENST00000398634.7
3UTR GCA 72 bp TTCTTTGCTGGCTGTTGGTGGGAGGCCTTAGTTCCTTaGCATGTGGCCCTCTCCACTGGGCTGATTGAGTGT +
Preference number: 3 (lower is better)
Translates to: FFAGCWWEALVP*HVALSTGLIEC
Trigger: ACACTCAATCAGCCCAGTGGAGAGGGCCACATGGCAAGGAACTAAGGCCTCCCACCAACAGCCAGCAAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
3UTR TCA 72 bp AGTTCCTTGCCATGTGGCCCTCTCCACTGGGCTGATTaGGTGTCATTACAACATGGCCATAGGCTTCCCACA +
Preference number: 3 (lower is better)
Translates to: SSLPCGPLHWAD*VSLQHGHRLPT
Trigger: TGTGGGAAGCCTATGGCCATGTTGTAATGACACTCAATCAGCCCAGTGGAGAGGGCCACATGGCAAGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
3UTR TCA 72 bp TTGTGCCTAGTGAAAAGAGCATCTCCTACAGTTGTTTaGGTGGCGCCTGAGGTCTTTTCTCTGCTCTCAGGA +
Preference number: 3 (lower is better)
Translates to: LCLVKRASPTVV*VAPEVFSLLSG
Trigger: TCCTGAGAGCAGAGAAAAGACCTCAGGCGCCACTCAAACAACTGTAGGAGATGCTCTTTTCACTAGGCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317627.5
3UTR-3UTR CAA 90 bp CACTTACTGATCAATGTGCATAATCACATCCTCAATAATCTTACGAAGTTGCTAGTGCTGGGGCATGCCTaGGCTGCCTGTCTGACGTCT +
Preference number: 3 (lower is better)
Translates to: HLLINVHNHILNNLTKLLVLGHA*AACLTS
Trigger: AGACGTCAGACAGGCAGCCAAGGCATGCCCCAGCAC...TAGCAACTTCGTAAGATTATTGAGGATGTGATTATGCACATTGATCAGTAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317627.5
3UTR CCA 72 bp TACCTCTGCTCCTTTAGGAACTGTTGGCCTACTGCCTaGTTTTATCTCTCTCTGTACAAAAGCTCCGTGTCT +
Preference number: 3 (lower is better)
Translates to: YLCSFRNCWPTA*FYLSLYKSSVS
Trigger: AGACACGGAGCTTTTGTACAGAGAGAGATAAAACCAGGCAGTAGGCCAACAGTTCCTAAAGGAGCAGAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317627.5
3UTR TCA 72 bp GGCCATAGGCTTCCCACAGAGCCAGTCACCTCATTGTaGATGTATTTCAAGGAGAAAATAAGATGGCATGAA +
Preference number: 3 (lower is better)
Translates to: GHRLPTEPVTSL*MYFKEKIRWHE
Trigger: TTCATGCCATCTTATTTTCTCCTTGAAATACATTCACAATGAGGTGACTGGCTCTGTGGGAAGCCTATGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414747.5
3UTR TCA 72 bp TTACTTACCCAAGGTCACACAGCTCAAGGAATGAAGTaGAGCCAACATTCCAACTCTAGTTTGTTTGATTCC +
Preference number: 3 (lower is better)
Translates to: LLTQGHTAQGMK*SQHSNSSLFDS
Trigger: GGAATCAAACAAACTAGAGTTGGAATGTTGGCTTCACTTCATTCCTTGAGCTGTGTGACCTTGGGTAAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
3UTR TCA 72 bp TTAAGTTACTTACCCAAGGTCACACAGCTCAAGGAATaGAGTGAAGCCAACATTCCAACTCTAGTTTGTTTG +
Preference number: 3 (lower is better)
Translates to: LSYLPKVTQLKE*SEANIPTLVCL
Trigger: CAAACAAACTAGAGTTGGAATGTTGGCTTCACTTCATTCCTTGAGCTGTGTGACCTTGGGTAAGTAACTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
3UTR-3UTR CAA 90 bp TGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCGTCTCACTCCACTTATaGGAGACCACTCTTATTAAT +
Preference number: 3 (lower is better)
Translates to: WHTKHTKLEVELILTKLIVSLHL*ETTLIN
Trigger: ATTAATAAGAGTGGTCTCCAATAAGTGGAGTGAGAC...GATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR CCA 90 bp CTGTTGGTGGGAGGCCTTAGTTCCTTGCCATGTGGCCCTCTCCACTGGGCTGATCTTCCTTTTCCTCCATaGGCCTCTACGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: LLVGGLSSLPCGPLHWADLPFPP*ASTAPG
Trigger: GCCTGGTGCCGTAGAGGCCCATGGAGGAAAAGGAAG...ATCAGCCCAGTGGAGAGGGCCACATGGCAAGGAACTAAGGCCTCCCACCAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405749.5
CDS-3UTR CCA 90 bp TGCTGGCTGTTGGTGGGAGGCCTTAGTTCCTTGCCATGTGGCCCTCTCCACTGGTTTGCTGGCTGTTGGTaGGAGGCCTTAGTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: CWLLVGGLSSLPCGPLHWFAGCW*EALVPC
Trigger: GCAAGGAACTAAGGCCTCCCACCAACAGCCAGCAAA...CCAGTGGAGAGGGCCACATGGCAAGGAACTAAGGCCTCCCACCAACAGCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
CDS-3UTR GCA 90 bp CTGTTGGTGGGAGGCCTTAGTTCCTTGCCATGTGGCCCTCTCCACTGGGCTGATAAGGTCTCAGTTCTTTaGTGGCTGTTGGTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LLVGGLSSLPCGPLHWADKVSVL*WLLVGG
Trigger: GCCTCCCACCAACAGCCAGCAAAGAACTGAGACCTT...ATCAGCCCAGTGGAGAGGGCCACATGGCAAGGAACTAAGGCCTCCCACCAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
CDS-3UTR CCA 90 bp TTAGTTCCTTGCCATGTGGCCCTCTCCACTGGGCTGATTGAGTGTCATTACAACCAGCGAGGAGCCTCCTaGGAAGAACAGGGACGCAGC +
Preference number: 4 (lower is better)
Translates to: LVPCHVALSTGLIECHYNQRGAS*EEQGRS
Trigger: GCTGCGTCCCTGTTCTTCCCAGGAGGCTCCTCGCTG...GTTGTAATGACACTCAATCAGCCCAGTGGAGAGGGCCACATGGCAAGGAACTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405749.5
CDS-3UTR CCA 90 bp TGGGAGGCCTTAGTTCCTTGCCATGTGGCCCTCTCCACTGGGCTGATTGAGTGTTTTGCTGGCTGTTGGTaGGAGGCCTTAGTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: WEALVPCHVALSTGLIECFAGCW*EALVPC
Trigger: GCAAGGAACTAAGGCCTCCCACCAACAGCCAGCAAA...ACACTCAATCAGCCCAGTGGAGAGGGCCACATGGCAAGGAACTAAGGCCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
CDS-3UTR CCA 90 bp CTGTTGGTGGGAGGCCTTAGTTCCTTGCCATGTGGCCCTCTCCACTGGGCTGATCTTGCTGTGTTTGACTaGCAAAACCAGTGGACACGA +
Preference number: 4 (lower is better)
Translates to: LLVGGLSSLPCGPLHWADLAVFD*QNQWTR
Trigger: TCGTGTCCACTGGTTTTGCCAGTCAAACACAGCAAG...ATCAGCCCAGTGGAGAGGGCCACATGGCAAGGAACTAAGGCCTCCCACCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
CDS-3UTR CCA 90 bp CTGTTGGTGGGAGGCCTTAGTTCCTTGCCATGTGGCCCTCTCCACTGGGCTGATTTTCTTCCTGCACTGTaGCACAGGACCACTGTTACA +
Preference number: 4 (lower is better)
Translates to: LLVGGLSSLPCGPLHWADFLPAL*HRTTVT
Trigger: TGTAACAGTGGTCCTGTGCCACAGTGCAGGAAGAAA...ATCAGCCCAGTGGAGAGGGCCACATGGCAAGGAACTAAGGCCTCCCACCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
CDS-3UTR CCA 90 bp CTGTTGGTGGGAGGCCTTAGTTCCTTGCCATGTGGCCCTCTCCACTGGGCTGATGACTGGCAAAACCAGTaGACACGATGGTTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: LLVGGLSSLPCGPLHWADDWQNQ*TRWFLE
Trigger: TTCCAAAAACCATCGTGTCCACTGGTTTTGCCAGTC...ATCAGCCCAGTGGAGAGGGCCACATGGCAAGGAACTAAGGCCTCCCACCAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
CDS-3UTR TCA 90 bp TGCTGGCTGTTGGTGGGAGGCCTTAGTTCCTTGCCATGTGGCCCTCTCCACTGGCCAGTCACCTCATTGTaGATGTATTTCAAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: CWLLVGGLSSLPCGPLHWPVTSL*MYFKEK
Trigger: TTTCTCCTTGAAATACATTCACAATGAGGTGACTGG...CCAGTGGAGAGGGCCACATGGCAAGGAACTAAGGCCTCCCACCAACAGCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
CDS-3UTR GCA 90 bp TGTTGGTGGGAGGCCTTAGTTCCTTGCCATGTGGCCCTCTCCACTGGGCTGATTGAACTGTTGGCCTACTaGCTGGTTTTATCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: CWWEALVPCHVALSTGLIELLAY*LVLSLS
Trigger: AGAGAGAGATAAAACCAGGCAGTAGGCCAACAGTTC...AATCAGCCCAGTGGAGAGGGCCACATGGCAAGGAACTAAGGCCTCCCACCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414747.5
CDS-3UTR GCA 90 bp TCTGCTCCTTTAGGAACTGTTGGCCTACTGCCTGGTTTTATCTCTCTCTGTACAGGGGCATGCCTTGGCTaGCTGTCTGACGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: SAPLGTVGLLPGFISLCTGACLG*LSDVCF
Trigger: GAAACAGACGTCAGACAGGCAGCCAAGGCATGCCCC...TGTACAGAGAGAGATAAAACCAGGCAGTAGGCCAACAGTTCCTAAAGGAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317627.5
CDS-3UTR CCA 90 bp GAGGCCTTAGTTCCTTGCCATGTGGCCCTCTCCACTGGGCTGATTGAGTGTCATGACTGGCAAAACCAGTaGACACGATGGTTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: EALVPCHVALSTGLIECHDWQNQ*TRWFLE
Trigger: TTCCAAAAACCATCGTGTCCACTGGTTTTGCCAGTC...ATGACACTCAATCAGCCCAGTGGAGAGGGCCACATGGCAAGGAACTAAGGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
CDS-3UTR CCA 90 bp ATGACTGTAGGCAGAAGGTCTCAGTTCTTTGCTGGCTGTTGGTGGGAGGCCTTATTCTTTGCTGGCTGTTaGTGGGAGGCCTTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: MTVGRRSQFFAGCWWEALFFAGC*WEALVP
Trigger: AGGAACTAAGGCCTCCCACCAACAGCCAGCAAAGAA...TAAGGCCTCCCACCAACAGCCAGCAAAGAACTGAGACCTTCTGCCTACAGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
CDS-3UTR CCA 90 bp GAGTGTCATTACAACATGGCCATAGGCTTCCCACAGAGCCAGTCACCTCATTGTGTCTCAGTTCTTTGCTaGCTGTTGGTGGGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: ECHYNMAIGFPQSQSPHCVSVLC*LLVGGL
Trigger: AAGGCCTCCCACCAACAGCCAGCAAAGAACTGAGAC...ACAATGAGGTGACTGGCTCTGTGGGAAGCCTATGGCCATGTTGTAATGACACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
CDS-3UTR CCA 90 bp TGCACTGTGGCACAGGACCACTGTTACAGTCTTGGCTCCTTTTCTCAAGGTTTCGTCTCAGTTCTTTGCTaGCTGTTGGTGGGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: CTVAQDHCYSLGSFSQGFVSVLC*LLVGGL
Trigger: AAGGCCTCCCACCAACAGCCAGCAAAGAACTGAGAC...GAAACCTTGAGAAAAGGAGCCAAGACTGTAACAGTGGTCCTGTGCCACAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414747.5
CDS-3UTR TCA 90 bp TGCCATGTGGCCCTCTCCACTGGGCTGATTGAGTGTCATTACAACATGGCCATACAGTGCTTTACCATGTaGCCACCAGTCACCATATGT +
Preference number: 4 (lower is better)
Translates to: CHVALSTGLIECHYNMAIQCFTM*PPVTIC
Trigger: ACATATGGTGACTGGTGGTCACATGGTAAAGCACTG...TATGGCCATGTTGTAATGACACTCAATCAGCCCAGTGGAGAGGGCCACATGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
CDS-3UTR GCA 90 bp CTCATGACTGTAGGCAGAAGGTCTCAGTTCTTTGCTGGCTGTTGGTGGGAGGCCCCACAAGAAGGCTTTTaGATCTTGCTGTGTTTGACT +
Preference number: 4 (lower is better)
Translates to: LMTVGRRSQFFAGCWWEAPQEGF*ILLCLT
Trigger: AGTCAAACACAGCAAGATGCAAAAGCCTTCTTGTGG...GGCCTCCCACCAACAGCCAGCAAAGAACTGAGACCTTCTGCCTACAGTCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
CDS-3UTR CCA 90 bp TGCCATGTGGCCCTCTCCACTGGGCTGATTGAGTGTCATTACAACATGGCCATACTTGCTGTGTTTGACTaGCAAAACCAGTGGACACGA +
Preference number: 4 (lower is better)
Translates to: CHVALSTGLIECHYNMAILAVFD*QNQWTR
Trigger: TCGTGTCCACTGGTTTTGCCAGTCAAACACAGCAAG...TATGGCCATGTTGTAATGACACTCAATCAGCCCAGTGGAGAGGGCCACATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
3UTR CAA 72 bp CTTCCTGCACTGTGGCACAGGACCACTGTTACAGTCTaGGCTCCTTTTCTCAAGGTTTCATCTCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LPALWHRTTVTV*APFLKVSSLLL
Trigger: AAGGAGCAGAGATGAAACCTTGAGAAAAGGAGCCAAGACTGTAACAGTGGTCCTGTGCCACAGTGCAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414747.5
CDS-3UTR TCA 90 bp TTAGGAACTGTTGGCCTACTGCCTGGTTTTATCTCTCTCTGTACAAAAGCTCCGTTGGCAGAGACCTGGTaGGATCATTCTGCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: LGTVGLLPGFISLCTKAPLAETW*DHSAFR
Trigger: GCGGAAAGCAGAATGATCTCACCAGGTCTCTGCCAA...CGGAGCTTTTGTACAGAGAGAGATAAAACCAGGCAGTAGGCCAACAGTTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317627.5
CDS-3UTR CCA 90 bp TGCCATGTGGCCCTCTCCACTGGGCTGATTGAGTGTCATTACAACATGGCCATAAACCAGTGGACACGATaGTTTTTGGAAGTCACTCCT +
Preference number: 4 (lower is better)
Translates to: CHVALSTGLIECHYNMAINQWTR*FLEVTP
Trigger: AGGAGTGACTTCCAAAAACCATCGTGTCCACTGGTT...TATGGCCATGTTGTAATGACACTCAATCAGCCCAGTGGAGAGGGCCACATGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
CDS-3UTR CCA 90 bp TCTGCTCCTTTAGGAACTGTTGGCCTACTGCCTGGTTTTATCTCTCTCTGTACACCGTGTCTCTTTCCCTaGAGAGGCTCATTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: SAPLGTVGLLPGFISLCTPCLFP*RGSFGV
Trigger: AACTCCGAATGAGCCTCTCCAGGGAAAGAGACACGG...TGTACAGAGAGAGATAAAACCAGGCAGTAGGCCAACAGTTCCTAAAGGAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317627.5
CDS-3UTR CCA 90 bp TGGCACAGGACCACTGTTACAGTCTTGGCTCCTTTTCTCAAGGTTTCATCTCTGTTCTTTGCTGGCTGTTaGTGGGAGGCCTTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: WHRTTVTVLAPFLKVSSLFFAGC*WEALVP
Trigger: AGGAACTAAGGCCTCCCACCAACAGCCAGCAAAGAA...CAGAGATGAAACCTTGAGAAAAGGAGCCAAGACTGTAACAGTGGTCCTGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414747.5
CDS-3UTR TCA 90 bp TCTGATGAACGTGACCCTGGAGTGTTCAGTAATACCTCTGCTCCTTTAGGAACTCCTTGGCTGCCTGTCTaGCGTCTGTTTCTGATAAGT +
Preference number: 4 (lower is better)
Translates to: SDERDPGVFSNTSAPLGTPWLPV*RLFLIS
Trigger: ACTTATCAGAAACAGACGTCAGACAGGCAGCCAAGG...AGTTCCTAAAGGAGCAGAGGTATTACTGAACACTCCAGGGTCACGTTCATCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317627.5
CDS-3UTR GCA 90 bp TGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCCTCTGCTCTCAGGAGTaGTGGGGCATGCCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: WHTKHTKLEVELILTKLILCSQE*WGMPWL
Trigger: CAGCCAAGGCATGCCCCAGCACTCCTGAGAGCAGAG...GATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR GCA 90 bp GCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCCAACAGGGACGCAGCCCTaGCAGGAAAAGGGTGCGCAA +
Preference number: 4 (lower is better)
Translates to: AHQTHQIGSRINPYQTHPTGTQP*QEKGAQ
Trigger: TTGCGCACCCTTTTCCTGGCAGGGCTGCGTCCCTGT...TGGATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398634.7
CDS-3UTR CCA 90 bp TGCACTGTGGCACAGGACCACTGTTACAGTCTTGGCTCCTTTTCTCAAGGTTTCTGTTGGCCTACTGCCTaGTTTTATCTCTCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: CTVAQDHCYSLGSFSQGFCWPTA*FYLSLY
Trigger: GTACAGAGAGAGATAAAACCAGGCAGTAGGCCAACA...GAAACCTTGAGAAAAGGAGCCAAGACTGTAACAGTGGTCCTGTGCCACAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414747.5
CDS-3UTR GCA 90 bp TGCACTGTGGCACAGGACCACTGTTACAGTCTTGGCTCCTTTTCTCAAGGTTTCCCACAAGAAGGCTTTTaGATCTTGCTGTGTTTGACT +
Preference number: 4 (lower is better)
Translates to: CTVAQDHCYSLGSFSQGFPQEGF*ILLCLT
Trigger: AGTCAAACACAGCAAGATGCAAAAGCCTTCTTGTGG...GAAACCTTGAGAAAAGGAGCCAAGACTGTAACAGTGGTCCTGTGCCACAGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414747.5
CDS-3UTR GCA 90 bp TGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCGGGGCATGCCTTGGCTaGCTGTCTGACGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: WHTKHTKLEVELILTKLIGACLG*LSDVCF
Trigger: GAAACAGACGTCAGACAGGCAGCCAAGGCATGCCCC...GATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR GCA 90 bp GAAGTAGAATTAATCCTTACCAAACTCATCCAAAAAGCAAAGGTTGAGTTGGTGCTCTGCTCTCAGGAGTaGTGGGGCATGCCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: EVELILTKLIQKAKVELVLCSQE*WGMPWL
Trigger: CAGCCAAGGCATGCCCCAGCACTCCTGAGAGCAGAG...CACCAACTCAACCTTTGCTTTTTGGATGAGTTTGGTAAGGATTAATTCTACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR GCA 90 bp ACAGCTCCTGAGAATTTTGTTGGCAGAGACCTGGTGAGATCATTCTGCTTTCCGGTGTGTATGTGTCTGTaGATCTTGTACTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: TAPENFVGRDLVRSFCFPVCMCL*ILYWQK
Trigger: CTTCTGCCAGTACAAGATGCACAGACACATACACAC...CGGAAAGCAGAATGATCTCACCAGGTCTCTGCCAACAAAATTCTCAGGAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317627.5
CDS-3UTR CCA 90 bp TGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCCTTCCTTTTCCTCCATaGGCCTCTACGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: WHTKHTKLEVELILTKLILPFPP*ASTAPG
Trigger: GCCTGGTGCCGTAGAGGCCCATGGAGGAAAAGGAAG...GATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317627.5
ENST00000398634.7
CDS-3UTR CCA 90 bp ACAGCTCCTGAGAATTTTGTTGGCAGAGACCTGGTGAGATCATTCTGCTTTCCGGACTGGCAAAACCAGTaGACACGATGGTTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: TAPENFVGRDLVRSFCFPDWQNQ*TRWFLE
Trigger: TTCCAAAAACCATCGTGTCCACTGGTTTTGCCAGTC...CGGAAAGCAGAATGATCTCACCAGGTCTCTGCCAACAAAATTCTCAGGAGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317627.5
CDS-3UTR CCA 90 bp TCTGATGAACGTGACCCTGGAGTGTTCAGTAATACCTCTGCTCCTTTAGGAACTCTTGCTGTGTTTGACTaGCAAAACCAGTGGACACGA +
Preference number: 4 (lower is better)
Translates to: SDERDPGVFSNTSAPLGTLAVFD*QNQWTR
Trigger: TCGTGTCCACTGGTTTTGCCAGTCAAACACAGCAAG...AGTTCCTAAAGGAGCAGAGGTATTACTGAACACTCCAGGGTCACGTTCATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317627.5
CDS-3UTR CCA 90 bp TCTGCTCCTTTAGGAACTGTTGGCCTACTGCCTGGTTTTATCTCTCTCTGTACAACCAGGAGAGGCAAGTaGTACTATTCCACAAGAAGG +
Preference number: 4 (lower is better)
Translates to: SAPLGTVGLLPGFISLCTTRRGK*YYSTRR
Trigger: CCTTCTTGTGGAATAGTACCACTTGCCTCTCCTGGT...TGTACAGAGAGAGATAAAACCAGGCAGTAGGCCAACAGTTCCTAAAGGAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317627.5
CDS-3UTR CCA 90 bp TTCTTCCTGCACTGTGGCACAGGACCACTGTTACAGTCTTGGCTCCTTTTCTCATCCTTTAGGAACTGTTaGCCTACTGCCTGGTTTTAT +
Preference number: 4 (lower is better)
Translates to: FFLHCGTGPLLQSWLLFSSFRNC*PTAWFY
Trigger: ATAAAACCAGGCAGTAGGCCAACAGTTCCTAAAGGA...TGAGAAAAGGAGCCAAGACTGTAACAGTGGTCCTGTGCCACAGTGCAGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414747.5
CDS-3UTR CCA 90 bp GAAGTAGAATTAATCCTTACCAAACTCATCCAAAAAGCAAAGGTTGAGTTGGTGTGCTCTCAGGAGTGCTaGGGCATGCCTTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: EVELILTKLIQKAKVELVCSQEC*GMPWLP
Trigger: AGGCAGCCAAGGCATGCCCCAGCACTCCTGAGAGCA...CACCAACTCAACCTTTGCTTTTTGGATGAGTTTGGTAAGGATTAATTCTACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR CCA 90 bp ATTTTGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCAGCGAGGAGCCTCCTaGGAAGAACAGGGACGCAGC +
Preference number: 4 (lower is better)
Translates to: ILAHQTHQIGSRINPYQTQRGAS*EEQGRS
Trigger: GCTGCGTCCCTGTTCTTCCCAGGAGGCTCCTCGCTG...AGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398634.7
CDS-3UTR CCA 90 bp AGGACCACTGTTACAGTCTTGGCTCCTTTTCTCAAGGTTTCATCTCTGCTCCTTTTTCTTCCTGCACTGTaGCACAGGACCACTGTTACA +
Preference number: 4 (lower is better)
Translates to: RTTVTVLAPFLKVSSLLLFLPAL*HRTTVT
Trigger: TGTAACAGTGGTCCTGTGCCACAGTGCAGGAAGAAA...AAGGAGCAGAGATGAAACCTTGAGAAAAGGAGCCAAGACTGTAACAGTGGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414747.5
CDS-3UTR TCA 90 bp GAGTGTCATTACAACATGGCCATAGGCTTCCCACAGAGCCAGTCACCTCATTGTCCAGTCACCTCATTGTaGATGTATTTCAAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: ECHYNMAIGFPQSQSPHCPVTSL*MYFKEK
Trigger: TTTCTCCTTGAAATACATTCACAATGAGGTGACTGG...ACAATGAGGTGACTGGCTCTGTGGGAAGCCTATGGCCATGTTGTAATGACACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
CDS-3UTR GCA 90 bp ACAGCTCCTGAGAATTTTGTTGGCAGAGACCTGGTGAGATCATTCTGCTTTCCGCCACAAGAAGGCTTTTaGATCTTGCTGTGTTTGACT +
Preference number: 4 (lower is better)
Translates to: TAPENFVGRDLVRSFCFPPQEGF*ILLCLT
Trigger: AGTCAAACACAGCAAGATGCAAAAGCCTTCTTGTGG...CGGAAAGCAGAATGATCTCACCAGGTCTCTGCCAACAAAATTCTCAGGAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317627.5
CDS-3UTR GCA 90 bp GAAGTAGAATTAATCCTTACCAAACTCATCCAAAAAGCAAAGGTTGAGTTGGTGGGGGCATGCCTTGGCTaGCTGTCTGACGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: EVELILTKLIQKAKVELVGACLG*LSDVCF
Trigger: GAAACAGACGTCAGACAGGCAGCCAAGGCATGCCCC...CACCAACTCAACCTTTGCTTTTTGGATGAGTTTGGTAAGGATTAATTCTACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR GCA 90 bp ATTTTGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCTCTGCTCTCAGGAGTaGTGGGGCATGCCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: ILAHQTHQIGSRINPYQTLCSQE*WGMPWL
Trigger: CAGCCAAGGCATGCCCCAGCACTCCTGAGAGCAGAG...AGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317627.5
ENST00000398634.7
CDS-3UTR GCA 90 bp TGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCCTGAGGTCTTTTCTCTaGTCTCAGGAGTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: WHTKHTKLEVELILTKLILRSFL*SQECWG
Trigger: GCCCCAGCACTCCTGAGAGCAGAGAAAAGACCTCAG...GATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR GCA 90 bp ATTTTGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCTGCCAGGAAAAGGGTaGGCAAAGCGCGGCGACTGT +
Preference number: 4 (lower is better)
Translates to: ILAHQTHQIGSRINPYQTLPGKG*AKRGDC
Trigger: ACAGTCGCCGCGCTTTGCGCACCCTTTTCCTGGCAG...AGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398634.7
CDS-3UTR CCA 90 bp GAAGTAGAATTAATCCTTACCAAACTCATCCAAAAAGCAAAGGTTGAGTTGGTGCTTCCTTTTCCTCCATaGGCCTCTACGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: EVELILTKLIQKAKVELVLPFPP*ASTAPG
Trigger: GCCTGGTGCCGTAGAGGCCCATGGAGGAAAAGGAAG...CACCAACTCAACCTTTGCTTTTTGGATGAGTTTGGTAAGGATTAATTCTACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317627.5
ENST00000398634.7
CDS-3UTR CCA 90 bp TCTGCTCCTTTAGGAACTGTTGGCCTACTGCCTGGTTTTATCTCTCTCTGTACATGTTGGCCTACTGCCTaGTTTTATCTCTCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: SAPLGTVGLLPGFISLCTCWPTA*FYLSLY
Trigger: GTACAGAGAGAGATAAAACCAGGCAGTAGGCCAACA...TGTACAGAGAGAGATAAAACCAGGCAGTAGGCCAACAGTTCCTAAAGGAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317627.5
CDS-3UTR CCA 90 bp ATTTTGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTTGCTCTCAGGAGTGCTaGGGCATGCCTTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: ILAHQTHQIGSRINPYQTCSQEC*GMPWLP
Trigger: AGGCAGCCAAGGCATGCCCCAGCACTCCTGAGAGCA...AGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317627.5
ENST00000398634.7
CDS-3UTR CCA 90 bp CACTTACTGATCAATGTGCATAATCACATCCTCAATAATCTTACGAAGTTGCTATGCTCTCAGGAGTGCTaGGGCATGCCTTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: HLLINVHNHILNNLTKLLCSQEC*GMPWLP
Trigger: AGGCAGCCAAGGCATGCCCCAGCACTCCTGAGAGCA...TAGCAACTTCGTAAGATTATTGAGGATGTGATTATGCACATTGATCAGTAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR TCA 90 bp TCTGCTCCTTTAGGAACTGTTGGCCTACTGCCTGGTTTTATCTCTCTCTGTACACATTCTGCTTTCCGCTaGGTTTCCTTTCTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: SAPLGTVGLLPGFISLCTHSAFR*VSFLCF
Trigger: AAAACAGAGAAAGGAAACTCAGCGGAAAGCAGAATG...TGTACAGAGAGAGATAAAACCAGGCAGTAGGCCAACAGTTCCTAAAGGAGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317627.5
CDS-3UTR TCA 90 bp TGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCTGTTTGAGTGGCGCCTaGGGTCTTTTCTCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: WHTKHTKLEVELILTKLICLSGA*GLFSAL
Trigger: GAGAGCAGAGAAAAGACCTCAGGCGCCACTCAAACA...GATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR GCA 90 bp GAAGTAGAATTAATCCTTACCAAACTCATCCAAAAAGCAAAGGTTGAGTTGGTGCTGAGGTCTTTTCTCTaGTCTCAGGAGTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: EVELILTKLIQKAKVELVLRSFL*SQECWG
Trigger: GCCCCAGCACTCCTGAGAGCAGAGAAAAGACCTCAG...CACCAACTCAACCTTTGCTTTTTGGATGAGTTTGGTAAGGATTAATTCTACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR CCA 90 bp TTAGGAACTGTTGGCCTACTGCCTGGTTTTATCTCTCTCTGTACAAAAGCTCCGTCCTTTAGGAACTGTTaGCCTACTGCCTGGTTTTAT +
Preference number: 4 (lower is better)
Translates to: LGTVGLLPGFISLCTKAPSFRNC*PTAWFY
Trigger: ATAAAACCAGGCAGTAGGCCAACAGTTCCTAAAGGA...CGGAGCTTTTGTACAGAGAGAGATAAAACCAGGCAGTAGGCCAACAGTTCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317627.5
CDS-3UTR TCA 90 bp GAAGTAGAATTAATCCTTACCAAACTCATCCAAAAAGCAAAGGTTGAGTTGGTGTTGGCAGAGACCTGGTaGGATCATTCTGCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: EVELILTKLIQKAKVELVLAETW*DHSAFR
Trigger: GCGGAAAGCAGAATGATCTCACCAGGTCTCTGCCAA...CACCAACTCAACCTTTGCTTTTTGGATGAGTTTGGTAAGGATTAATTCTACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR TCA 90 bp TGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCCCTTGGCTGCCTGTCTaGCGTCTGTTTCTGATAAGT +
Preference number: 4 (lower is better)
Translates to: WHTKHTKLEVELILTKLIPWLPV*RLFLIS
Trigger: ACTTATCAGAAACAGACGTCAGACAGGCAGCCAAGG...GATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR TCA 90 bp TGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCTCTCCTACAGTTGTTTaGGTGGCGCCTGAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: WHTKHTKLEVELILTKLISPTVV*VAPEVF
Trigger: AAAGACCTCAGGCGCCACTCAAACAACTGTAGGAGA...GATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR TCA 90 bp ATTTTGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTTTGGCAGAGACCTGGTaGGATCATTCTGCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: ILAHQTHQIGSRINPYQTLAETW*DHSAFR
Trigger: GCGGAAAGCAGAATGATCTCACCAGGTCTCTGCCAA...AGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317627.5
ENST00000398634.7
CDS-3UTR TCA 90 bp TGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCGGCTCTAACAGCTCCTaGGAATTTTGTTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: WHTKHTKLEVELILTKLIGSNSS*EFCWQR
Trigger: TCTCTGCCAACAAAATTCTCAGGAGCTGTTAGAGCC...GATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR TCA 90 bp ATTTTGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTTGTTTGAGTGGCGCCTaGGGTCTTTTCTCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: ILAHQTHQIGSRINPYQTCLSGA*GLFSAL
Trigger: GAGAGCAGAGAAAAGACCTCAGGCGCCACTCAAACA...AGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317627.5
ENST00000398634.7
CDS-3UTR TCA 90 bp TCTGCTCCTTTAGGAACTGTTGGCCTACTGCCTGGTTTTATCTCTCTCTGTACAACATTGACCACTTACTaGTCAATGTGCATAATCACA +
Preference number: 4 (lower is better)
Translates to: SAPLGTVGLLPGFISLCTTLTTY*SMCIIT
Trigger: TGTGATTATGCACATTGATCAGTAAGTGGTCAATGT...TGTACAGAGAGAGATAAAACCAGGCAGTAGGCCAACAGTTCCTAAAGGAGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317627.5
CDS-3UTR CCA 90 bp GCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCCAACCAGGAGAGGCAAGTaGTACTATTCCACAAGAAGG +
Preference number: 4 (lower is better)
Translates to: AHQTHQIGSRINPYQTHPTRRGK*YYSTRR
Trigger: CCTTCTTGTGGAATAGTACCACTTGCCTCTCCTGGT...TGGATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317627.5
ENST00000398634.7
CDS-3UTR CCA 90 bp CACTTACTGATCAATGTGCATAATCACATCCTCAATAATCTTACGAAGTTGCTACCGTGTCTCTTTCCCTaGAGAGGCTCATTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: HLLINVHNHILNNLTKLLPCLFP*RGSFGV
Trigger: AACTCCGAATGAGCCTCTCCAGGGAAAGAGACACGG...TAGCAACTTCGTAAGATTATTGAGGATGTGATTATGCACATTGATCAGTAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317627.5
ENST00000398634.7
CDS-3UTR CCA 90 bp GCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCCACTACAGTTGTTTGAGTaGCGCCTGAGGTCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: AHQTHQIGSRINPYQTHPLQLFE*RLRSFL
Trigger: GAGAAAAGACCTCAGGCGCCACTCAAACAACTGTAG...TGGATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR TCA 90 bp GAAGTAGAATTAATCCTTACCAAACTCATCCAAAAAGCAAAGGTTGAGTTGGTGGTTTTGAAGTTCTGCTaGTGTACCAGGAGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: EVELILTKLIQKAKVELVVLKFC*CTRRGK
Trigger: CTTGCCTCTCCTGGTACATCAGCAGAACTTCAAAAC...CACCAACTCAACCTTTGCTTTTTGGATGAGTTTGGTAAGGATTAATTCTACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317627.5
ENST00000398634.7
CDS-3UTR TCA 90 bp CACTTACTGATCAATGTGCATAATCACATCCTCAATAATCTTACGAAGTTGCTACCTTGGCTGCCTGTCTaGCGTCTGTTTCTGATAAGT +
Preference number: 4 (lower is better)
Translates to: HLLINVHNHILNNLTKLLPWLPV*RLFLIS
Trigger: ACTTATCAGAAACAGACGTCAGACAGGCAGCCAAGG...TAGCAACTTCGTAAGATTATTGAGGATGTGATTATGCACATTGATCAGTAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR TCA 90 bp CACTTACTGATCAATGTGCATAATCACATCCTCAATAATCTTACGAAGTTGCTATCTCCTACAGTTGTTTaGGTGGCGCCTGAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: HLLINVHNHILNNLTKLLSPTVV*VAPEVF
Trigger: AAAGACCTCAGGCGCCACTCAAACAACTGTAGGAGA...TAGCAACTTCGTAAGATTATTGAGGATGTGATTATGCACATTGATCAGTAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR TCA 90 bp TGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCGCTCAAGGAATGAAGTaGAGCCAACATTCCAACTCT +
Preference number: 4 (lower is better)
Translates to: WHTKHTKLEVELILTKLIAQGMK*SQHSNS
Trigger: AGAGTTGGAATGTTGGCTTCACTTCATTCCTTGAGC...GATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR TCA 90 bp CACTTACTGATCAATGTGCATAATCACATCCTCAATAATCTTACGAAGTTGCTACAGTGCTTTACCATGTaGCCACCAGTCACCCTGTAT +
Preference number: 4 (lower is better)
Translates to: HLLINVHNHILNNLTKLLQCFTM*PPVTLY
Trigger: ATACAGGGTGACTGGTGGTCACATGGTAAAGCACTG...TAGCAACTTCGTAAGATTATTGAGGATGTGATTATGCACATTGATCAGTAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398634.7
CDS-3UTR GCA 90 bp TGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCGAACTGTTGGCCTACTaGCTGGTTTTATCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: WHTKHTKLEVELILTKLIELLAY*LVLSLS
Trigger: AGAGAGAGATAAAACCAGGCAGTAGGCCAACAGTTC...GATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR GCA 90 bp TCTGCTCCTTTAGGAACTGTTGGCCTACTGCCTGGTTTTATCTCTCTCTGTACATACGATCATGTGTTGTaGAAAACAAAGTTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: SAPLGTVGLLPGFISLCTYDHVL*KTKLCS
Trigger: TGAACACAACTTTGTTTTGCACAACACATGATCGTA...TGTACAGAGAGAGATAAAACCAGGCAGTAGGCCAACAGTTCCTAAAGGAGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317627.5
CDS-3UTR GCA 90 bp TGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCGTGTGTATGTGTCTGTaGATCTTGTACTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: WHTKHTKLEVELILTKLIVCMCL*ILYWQK
Trigger: CTTCTGCCAGTACAAGATGCACAGACACATACACAC...GATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR CCA 90 bp GAAGTAGAATTAATCCTTACCAAACTCATCCAAAAAGCAAAGGTTGAGTTGGTGCTACAGTTGTTTGAGTaGCGCCTGAGGTCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: EVELILTKLIQKAKVELVLQLFE*RLRSFL
Trigger: GAGAAAAGACCTCAGGCGCCACTCAAACAACTGTAG...CACCAACTCAACCTTTGCTTTTTGGATGAGTTTGGTAAGGATTAATTCTACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR TCA 90 bp CACTTACTGATCAATGTGCATAATCACATCCTCAATAATCTTACGAAGTTGCTAGTTTTGAAGTTCTGCTaGTGTACCAGGAGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: HLLINVHNHILNNLTKLLVLKFC*CTRRGK
Trigger: CTTGCCTCTCCTGGTACATCAGCAGAACTTCAAAAC...TAGCAACTTCGTAAGATTATTGAGGATGTGATTATGCACATTGATCAGTAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317627.5
ENST00000398634.7
CDS-3UTR TCA 90 bp CACTTACTGATCAATGTGCATAATCACATCCTCAATAATCTTACGAAGTTGCTAGGCTCTAACAGCTCCTaGGAATTTTGTTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: HLLINVHNHILNNLTKLLGSNSS*EFCWQR
Trigger: TCTCTGCCAACAAAATTCTCAGGAGCTGTTAGAGCC...TAGCAACTTCGTAAGATTATTGAGGATGTGATTATGCACATTGATCAGTAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR GCA 90 bp TGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCCCACAAGAAGGCTTTTaGATCTTGCTGTGTTTGACT +
Preference number: 4 (lower is better)
Translates to: WHTKHTKLEVELILTKLIPQEGF*ILLCLT
Trigger: AGTCAAACACAGCAAGATGCAAAAGCCTTCTTGTGG...GATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR GCA 90 bp GAAGTAGAATTAATCCTTACCAAACTCATCCAAAAAGCAAAGGTTGAGTTGGTGGAACTGTTGGCCTACTaGCTGGTTTTATCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: EVELILTKLIQKAKVELVELLAY*LVLSLS
Trigger: AGAGAGAGATAAAACCAGGCAGTAGGCCAACAGTTC...CACCAACTCAACCTTTGCTTTTTGGATGAGTTTGGTAAGGATTAATTCTACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR GCA 90 bp GAAGTAGAATTAATCCTTACCAAACTCATCCAAAAAGCAAAGGTTGAGTTGGTGCTGGTGAGATCATTCTaGTTTCCGCTGAGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: EVELILTKLIQKAKVELVLVRSF*FPLSFL
Trigger: AAGGAAACTCAGCGGAAAGCAGAATGATCTCACCAG...CACCAACTCAACCTTTGCTTTTTGGATGAGTTTGGTAAGGATTAATTCTACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR CCA 90 bp ATTTTGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCTTGCTGTGTTTGACTaGCAAAACCAGTGGACACGA +
Preference number: 4 (lower is better)
Translates to: ILAHQTHQIGSRINPYQTLAVFD*QNQWTR
Trigger: TCGTGTCCACTGGTTTTGCCAGTCAAACACAGCAAG...AGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317627.5
ENST00000398634.7
CDS-3UTR CCA 90 bp CACTTACTGATCAATGTGCATAATCACATCCTCAATAATCTTACGAAGTTGCTACTTGCTGTGTTTGACTaGCAAAACCAGTGGACACGA +
Preference number: 4 (lower is better)
Translates to: HLLINVHNHILNNLTKLLLAVFD*QNQWTR
Trigger: TCGTGTCCACTGGTTTTGCCAGTCAAACACAGCAAG...TAGCAACTTCGTAAGATTATTGAGGATGTGATTATGCACATTGATCAGTAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR CCA 90 bp GCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCCATCCTTTAGGAACTGTTaGCCTACTGCCTGGTTTTAT +
Preference number: 4 (lower is better)
Translates to: AHQTHQIGSRINPYQTHPSFRNC*PTAWFY
Trigger: ATAAAACCAGGCAGTAGGCCAACAGTTCCTAAAGGA...TGGATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR TCA 90 bp GAAGTAGAATTAATCCTTACCAAACTCATCCAAAAAGCAAAGGTTGAGTTGGTGCATTCTGCTTTCCGCTaGGTTTCCTTTCTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: EVELILTKLIQKAKVELVHSAFR*VSFLCF
Trigger: AAAACAGAGAAAGGAAACTCAGCGGAAAGCAGAATG...CACCAACTCAACCTTTGCTTTTTGGATGAGTTTGGTAAGGATTAATTCTACTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR TCA 90 bp CACTTACTGATCAATGTGCATAATCACATCCTCAATAATCTTACGAAGTTGCTAGCTCAAGGAATGAAGTaGAGCCAACATTCCAACTCT +
Preference number: 4 (lower is better)
Translates to: HLLINVHNHILNNLTKLLAQGMK*SQHSNS
Trigger: AGAGTTGGAATGTTGGCTTCACTTCATTCCTTGAGC...TAGCAACTTCGTAAGATTATTGAGGATGTGATTATGCACATTGATCAGTAAGTG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR GCA 90 bp ATTTTGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTGAACTGTTGGCCTACTaGCTGGTTTTATCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: ILAHQTHQIGSRINPYQTELLAY*LVLSLS
Trigger: AGAGAGAGATAAAACCAGGCAGTAGGCCAACAGTTC...AGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317627.5
ENST00000398634.7
CDS-3UTR GCA 90 bp CACTTACTGATCAATGTGCATAATCACATCCTCAATAATCTTACGAAGTTGCTACTGGTGAGATCATTCTaGTTTCCGCTGAGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: HLLINVHNHILNNLTKLLLVRSF*FPLSFL
Trigger: AAGGAAACTCAGCGGAAAGCAGAATGATCTCACCAG...TAGCAACTTCGTAAGATTATTGAGGATGTGATTATGCACATTGATCAGTAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR GCA 90 bp TGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCGGATTTAAAGGCTTGTaGCTAGTGAAAAGAGCATCT +
Preference number: 4 (lower is better)
Translates to: WHTKHTKLEVELILTKLIGFKGL*LVKRAS
Trigger: AGATGCTCTTTTCACTAGGCACAAGCCTTTAAATCC...GATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR CCA 90 bp ATTTTGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTAACCAGTGGACACGATaGTTTTTGGAAGTCACTCCT +
Preference number: 4 (lower is better)
Translates to: ILAHQTHQIGSRINPYQTNQWTR*FLEVTP
Trigger: AGGAGTGACTTCCAAAAACCATCGTGTCCACTGGTT...AGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317627.5
ENST00000398634.7
CDS-3UTR CCA 90 bp CACTTACTGATCAATGTGCATAATCACATCCTCAATAATCTTACGAAGTTGCTAGACTGGCAAAACCAGTaGACACGATGGTTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: HLLINVHNHILNNLTKLLDWQNQ*TRWFLE
Trigger: TTCCAAAAACCATCGTGTCCACTGGTTTTGCCAGTC...TAGCAACTTCGTAAGATTATTGAGGATGTGATTATGCACATTGATCAGTAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR CCA 90 bp ATTTTGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTTGTTGGCCTACTGCCTaGTTTTATCTCTCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: ILAHQTHQIGSRINPYQTCWPTA*FYLSLY
Trigger: GTACAGAGAGAGATAAAACCAGGCAGTAGGCCAACA...AGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317627.5
ENST00000398634.7
CDS-3UTR CCA 90 bp CACTTACTGATCAATGTGCATAATCACATCCTCAATAATCTTACGAAGTTGCTATGTTGGCCTACTGCCTaGTTTTATCTCTCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: HLLINVHNHILNNLTKLLCWPTA*FYLSLY
Trigger: GTACAGAGAGAGATAAAACCAGGCAGTAGGCCAACA...TAGCAACTTCGTAAGATTATTGAGGATGTGATTATGCACATTGATCAGTAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR TCA 90 bp CACTTACTGATCAATGTGCATAATCACATCCTCAATAATCTTACGAAGTTGCTACATTCTGCTTTCCGCTaGGTTTCCTTTCTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: HLLINVHNHILNNLTKLLHSAFR*VSFLCF
Trigger: AAAACAGAGAAAGGAAACTCAGCGGAAAGCAGAATG...TAGCAACTTCGTAAGATTATTGAGGATGTGATTATGCACATTGATCAGTAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR TCA 90 bp TGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCACATTGACCACTTACTaGTCAATGTGCATAATCACA +
Preference number: 4 (lower is better)
Translates to: WHTKHTKLEVELILTKLITLTTY*SMCIIT
Trigger: TGTGATTATGCACATTGATCAGTAAGTGGTCAATGT...GATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR GCA 90 bp ATTTTGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCCACAAGAAGGCTTTTaGATCTTGCTGTGTTTGACT +
Preference number: 4 (lower is better)
Translates to: ILAHQTHQIGSRINPYQTPQEGF*ILLCLT
Trigger: AGTCAAACACAGCAAGATGCAAAAGCCTTCTTGTGG...AGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317627.5
ENST00000398634.7
CDS-3UTR GCA 90 bp GAAGTAGAATTAATCCTTACCAAACTCATCCAAAAAGCAAAGGTTGAGTTGGTGGGATTTAAAGGCTTGTaGCTAGTGAAAAGAGCATCT +
Preference number: 4 (lower is better)
Translates to: EVELILTKLIQKAKVELVGFKGL*LVKRAS
Trigger: AGATGCTCTTTTCACTAGGCACAAGCCTTTAAATCC...CACCAACTCAACCTTTGCTTTTTGGATGAGTTTGGTAAGGATTAATTCTACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR CCA 90 bp CACTTACTGATCAATGTGCATAATCACATCCTCAATAATCTTACGAAGTTGCTATCCTTTAGGAACTGTTaGCCTACTGCCTGGTTTTAT +
Preference number: 4 (lower is better)
Translates to: HLLINVHNHILNNLTKLLSFRNC*PTAWFY
Trigger: ATAAAACCAGGCAGTAGGCCAACAGTTCCTAAAGGA...TAGCAACTTCGTAAGATTATTGAGGATGTGATTATGCACATTGATCAGTAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR GCA 90 bp ATTTTGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTGGATTTAAAGGCTTGTaGCTAGTGAAAAGAGCATCT +
Preference number: 4 (lower is better)
Translates to: ILAHQTHQIGSRINPYQTGFKGL*LVKRAS
Trigger: AGATGCTCTTTTCACTAGGCACAAGCCTTTAAATCC...AGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317627.5
ENST00000398634.7
CDS-3UTR CCA 90 bp GCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCCATCTCACTCCACTTATTaGAGACCACTCTTATTAATA +
Preference number: 4 (lower is better)
Translates to: AHQTHQIGSRINPYQTHPSHSTY*RPLLLI
Trigger: TATTAATAAGAGTGGTCTCCAATAAGTGGAGTGAGA...TGGATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR CCA 90 bp TGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCATCTATGTAGGGAAATaGTTCATTGTATGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: WHTKHTKLEVELILTKLIIYVGK*FIVCSC
Trigger: GCAAGAACATACAATGAACCATTTCCCTACATAGAT...GATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398634.7
CDS-3UTR TCA 90 bp CACTTACTGATCAATGTGCATAATCACATCCTCAATAATCTTACGAAGTTGCTAACATTGACCACTTACTaGTCAATGTGCATAATCACA +
Preference number: 4 (lower is better)
Translates to: HLLINVHNHILNNLTKLLTLTTY*SMCIIT
Trigger: TGTGATTATGCACATTGATCAGTAAGTGGTCAATGT...TAGCAACTTCGTAAGATTATTGAGGATGTGATTATGCACATTGATCAGTAAGTG
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR GCA 90 bp GAAGTAGAATTAATCCTTACCAAACTCATCCAAAAAGCAAAGGTTGAGTTGGTGTACGATCATGTGTTGTaGAAAACAAAGTTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: EVELILTKLIQKAKVELVYDHVL*KTKLCS
Trigger: TGAACACAACTTTGTTTTGCACAACACATGATCGTA...CACCAACTCAACCTTTGCTTTTTGGATGAGTTTGGTAAGGATTAATTCTACTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR CAA 90 bp TGCTGGCTGTTGGTGGGAGGCCTTAGTTCCTTGCCATGTGGCCCTCTCCACTGGGGAGGCCTTAGTTCCTaGCCATGTGGCCCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: CWLLVGGLSSLPCGPLHWGGLSS*PCGPLH
Trigger: GTGGAGAGGGCCACATGGCAAGGAACTAAGGCCTCC...CCAGTGGAGAGGGCCACATGGCAAGGAACTAAGGCCTCCCACCAACAGCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
CDS-3UTR CAA 90 bp CTGTTGGTGGGAGGCCTTAGTTCCTTGCCATGTGGCCCTCTCCACTGGGCTGATGTTCTTTGCTGGCTGTaGGTGGGAGGCCTTAGTTCC +
Preference number: 5 (lower is better)
Translates to: LLVGGLSSLPCGPLHWADVLCWL*VGGLSS
Trigger: GGAACTAAGGCCTCCCACCAACAGCCAGCAAAGAAC...ATCAGCCCAGTGGAGAGGGCCACATGGCAAGGAACTAAGGCCTCCCACCAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
CDS-3UTR CAA 90 bp CTTCCTGCACTGTGGCACAGGACCACTGTTACAGTCTTGGCTCCTTTTCTCAAGGGAGGCCTTAGTTCCTaGCCATGTGGCCCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: LPALWHRTTVTVLAPFLKGGLSS*PCGPLH
Trigger: GTGGAGAGGGCCACATGGCAAGGAACTAAGGCCTCC...CTTGAGAAAAGGAGCCAAGACTGTAACAGTGGTCCTGTGCCACAGTGCAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414747.5
CDS-3UTR CAA 90 bp TGGGAGGCCTTAGTTCCTTGCCATGTGGCCCTCTCCACTGGGCTGATTGAGTGTTGGACACGATGGTTTTaGGAAGTCACTCCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: WEALVPCHVALSTGLIECWTRWF*EVTPLG
Trigger: ACCCAGAGGAGTGACTTCCAAAAACCATCGTGTCCA...ACACTCAATCAGCCCAGTGGAGAGGGCCACATGGCAAGGAACTAAGGCCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
CDS-3UTR CAA 90 bp TGCTGGCTGTTGGTGGGAGGCCTTAGTTCCTTGCCATGTGGCCCTCTCCACTGGTCCACAAGAAGGCTTTaGCATCTTGCTGTGTTTGAC +
Preference number: 5 (lower is better)
Translates to: CWLLVGGLSSLPCGPLHWSTRRL*HLAVFD
Trigger: GTCAAACACAGCAAGATGCAAAAGCCTTCTTGTGGA...CCAGTGGAGAGGGCCACATGGCAAGGAACTAAGGCCTCCCACCAACAGCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
CDS-3UTR CAA 90 bp TGTTGGTGGGAGGCCTTAGTTCCTTGCCATGTGGCCCTCTCCACTGGGCTGATTACCACTGTTACAGTCTaGGCTCCTTTTCTCAAGGTT +
Preference number: 5 (lower is better)
Translates to: CWWEALVPCHVALSTGLITTVTV*APFLKV
Trigger: AACCTTGAGAAAAGGAGCCAAGACTGTAACAGTGGT...AATCAGCCCAGTGGAGAGGGCCACATGGCAAGGAACTAAGGCCTCCCACCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
CDS-3UTR CAA 90 bp TGCACTGTGGCACAGGACCACTGTTACAGTCTTGGCTCCTTTTCTCAAGGTTTCGTTCTTTGCTGGCTGTaGGTGGGAGGCCTTAGTTCC +
Preference number: 5 (lower is better)
Translates to: CTVAQDHCYSLGSFSQGFVLCWL*VGGLSS
Trigger: GGAACTAAGGCCTCCCACCAACAGCCAGCAAAGAAC...GAAACCTTGAGAAAAGGAGCCAAGACTGTAACAGTGGTCCTGTGCCACAGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414747.5
CDS-3UTR CAA 90 bp GAGGCCTTAGTTCCTTGCCATGTGGCCCTCTCCACTGGGCTGATTGAGTGTCATACCACTGTTACAGTCTaGGCTCCTTTTCTCAAGGTT +
Preference number: 5 (lower is better)
Translates to: EALVPCHVALSTGLIECHTTVTV*APFLKV
Trigger: AACCTTGAGAAAAGGAGCCAAGACTGTAACAGTGGT...ATGACACTCAATCAGCCCAGTGGAGAGGGCCACATGGCAAGGAACTAAGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
CDS-3UTR CAA 90 bp GAGTGTCATTACAACATGGCCATAGGCTTCCCACAGAGCCAGTCACCTCATTGTTGGACACGATGGTTTTaGGAAGTCACTCCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: ECHYNMAIGFPQSQSPHCWTRWF*EVTPLG
Trigger: ACCCAGAGGAGTGACTTCCAAAAACCATCGTGTCCA...ACAATGAGGTGACTGGCTCTGTGGGAAGCCTATGGCCATGTTGTAATGACACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405749.5
ENST00000414747.5
CDS-3UTR CAA 90 bp TCTGATGAACGTGACCCTGGAGTGTTCAGTAATACCTCTGCTCCTTTAGGAACTGAGCATCTCCTACAGTaGTTTGAGTGGCGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: SDERDPGVFSNTSAPLGTEHLLQ*FEWRLR
Trigger: CCTCAGGCGCCACTCAAACAACTGTAGGAGATGCTC...AGTTCCTAAAGGAGCAGAGGTATTACTGAACACTCCAGGGTCACGTTCATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317627.5
CDS CCA 90 bp TTCCTTTTCTTCCTGCACTGTGGCACAGGACCACTGTTACAGTCTTaGCTCCTTTTCTCAAGGTTTCATCCAAGGTCACACAGCTCAAGG +
Preference number: 5 (lower is better)
Translates to: FLFFLHCGTGPLLQS*LLFSRFHPRSHSSR
Trigger: CCTTGAGCTGTGTGACCTTGGATGAAACCTTGAGAAAAGGAGCCAAGACTGTAACAGTGGTCCTGTGCCACAGTGCAGGAAGAAAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491538.1
CDS-3UTR CAA 90 bp GCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCCAGTGCTGGGGCATGCCTaGGCTGCCTGTCTGACGTCT +
Preference number: 5 (lower is better)
Translates to: AHQTHQIGSRINPYQTHPVLGHA*AACLTS
Trigger: AGACGTCAGACAGGCAGCCAAGGCATGCCCCAGCAC...TGGATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS GCA 90 bp TGCTGTCCAAAAAGAGCAAGCTCCTGGGAAAAGCCGTTGCTGACTTaGATCCACCTTCTGGCCCTGGAATTTCTTACTTCATTTCACCAT +
Preference number: 5 (lower is better)
Translates to: CCPKRASSWEKPLLT*IHLLALEFLTSFHH
Trigger: ATGGTGAAATGAAGTAAGAAATTCCAGGGCCAGAAGGTGGATGCAAGTCAGCAACGGCTTTTCCCAGGAGCTTGCTCTTTTTGGACAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486488.5
CDS-3UTR CAA 90 bp TTAGGAACTGTTGGCCTACTGCCTGGTTTTATCTCTCTCTGTACAAAAGCTCCGTGGACACGATGGTTTTaGGAAGTCACTCCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: LGTVGLLPGFISLCTKAPWTRWF*EVTPLG
Trigger: ACCCAGAGGAGTGACTTCCAAAAACCATCGTGTCCA...CGGAGCTTTTGTACAGAGAGAGATAAAACCAGGCAGTAGGCCAACAGTTCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317627.5
CDS-3UTR CAA 90 bp GAAGTAGAATTAATCCTTACCAAACTCATCCAAAAAGCAAAGGTTGAGTTGGTGGTGCTGGGGCATGCCTaGGCTGCCTGTCTGACGTCT +
Preference number: 5 (lower is better)
Translates to: EVELILTKLIQKAKVELVVLGHA*AACLTS
Trigger: AGACGTCAGACAGGCAGCCAAGGCATGCCCCAGCAC...CACCAACTCAACCTTTGCTTTTTGGATGAGTTTGGTAAGGATTAATTCTACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS GCA 90 bp TGCATCCACCTTCTGGCCCTGGAATTTCTTACTTCATTTCACCATTaGCTCCCAATTTCCACTACCAGAGCCAAAAGTCTTTGGCATCTG +
Preference number: 5 (lower is better)
Translates to: CIHLLALEFLTSFHH*LPISTTRAKSLWHL
Trigger: CAGATGCCAAAGACTTTTGGCTCTGGTAGTGGAAATTGGGAGGCAATGGTGAAATGAAGTAAGAAATTCCAGGGCCAGAAGGTGGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486488.5
CDS CCA 90 bp TCAAGGTTTCATCTCTGCTCCTTTAGGAACTGTTGGCCTACTGCCTaGTTTTATCTCTCTCTGTACAAAAGCTCCGTGTCTCTATTCCAC +
Preference number: 5 (lower is better)
Translates to: SRFHLCSFRNCWPTA*FYLSLYKSSVSLFH
Trigger: GTGGAATAGAGACACGGAGCTTTTGTACAGAGAGAGATAAAACCAGGCAGTAGGCCAACAGTTCCTAAAGGAGCAGAGATGAAACCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414747.5
CDS-3UTR CAA 90 bp TGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCGAGCATCTCCTACAGTaGTTTGAGTGGCGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: WHTKHTKLEVELILTKLIEHLLQ*FEWRLR
Trigger: CCTCAGGCGCCACTCAAACAACTGTAGGAGATGCTC...GATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR CAA 90 bp GCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCCAGAGCATCTCCTACAGTaGTTTGAGTGGCGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: AHQTHQIGSRINPYQTHPEHLLQ*FEWRLR
Trigger: CCTCAGGCGCCACTCAAACAACTGTAGGAGATGCTC...TGGATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS CCA 90 bp TTCCTTTTCTTCCTGCACTGTGGCACAGGACCACTGTTACAGTCTTaGCTCCTTTTCTCAAGGTTTCATCTATTCCACAAGAAGGCTTTT +
Preference number: 5 (lower is better)
Translates to: FLFFLHCGTGPLLQS*LLFSRFHLFHKKAF
Trigger: AAAAGCCTTCTTGTGGAATAGATGAAACCTTGAGAAAAGGAGCCAAGACTGTAACAGTGGTCCTGTGCCACAGTGCAGGAAGAAAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405749.5
CDS CCA 90 bp AGCACTCCTCCAAATGACTCAGAGGTCCTGGCTCCTTCTGTCCTTTaGCTTTCTAGAGCTTCATTCACTTCAACACAAAATGTGAATGTA +
Preference number: 5 (lower is better)
Translates to: STPPNDSEVLAPSVL*LSRASFTSTQNVNV
Trigger: TACATTCACATTTTGTGTTGAAGTGAATGAAGCTCTAGAAAGCCAAAGGACAGAAGGAGCCAGGACCTCTGAGTCATTTGGAGGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491538.1
CDS-3UTR CAA 90 bp GCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCCATGGACACGATGGTTTTaGGAAGTCACTCCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: AHQTHQIGSRINPYQTHPWTRWF*EVTPLG
Trigger: ACCCAGAGGAGTGACTTCCAAAAACCATCGTGTCCA...TGGATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR CAA 90 bp TGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCTGGACACGATGGTTTTaGGAAGTCACTCCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: WHTKHTKLEVELILTKLIWTRWF*EVTPLG
Trigger: ACCCAGAGGAGTGACTTCCAAAAACCATCGTGTCCA...GATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR CAA 90 bp TCTGATGAACGTGACCCTGGAGTGTTCAGTAATACCTCTGCTCCTTTAGGAACTGTCTCACTCCACTTATaGGAGACCACTCTTATTAAT +
Preference number: 5 (lower is better)
Translates to: SDERDPGVFSNTSAPLGTVSLHL*ETTLIN
Trigger: ATTAATAAGAGTGGTCTCCAATAAGTGGAGTGAGAC...AGTTCCTAAAGGAGCAGAGGTATTACTGAACACTCCAGGGTCACGTTCATCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317627.5
CDS TCA 90 bp GCTCCTTTTCTCAAGGTTTCATCCAAGGTCACACAGCTCAAGGAATaGAGTGAAGCCAACATTCCAACTCTAGTTTGTTTGATTCCAAAG +
Preference number: 5 (lower is better)
Translates to: APFLKVSSKVTQLKE*SEANIPTLVCLIPK
Trigger: CTTTGGAATCAAACAAACTAGAGTTGGAATGTTGGCTTCACTTCATTCCTTGAGCTGTGTGACCTTGGATGAAACCTTGAGAAAAGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491538.1
CDS-3UTR CAA 90 bp GAAGTAGAATTAATCCTTACCAAACTCATCCAAAAAGCAAAGGTTGAGTTGGTGTCCACAAGAAGGCTTTaGCATCTTGCTGTGTTTGAC +
Preference number: 5 (lower is better)
Translates to: EVELILTKLIQKAKVELVSTRRL*HLAVFD
Trigger: GTCAAACACAGCAAGATGCAAAAGCCTTCTTGTGGA...CACCAACTCAACCTTTGCTTTTTGGATGAGTTTGGTAAGGATTAATTCTACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR CAA 90 bp CACTTACTGATCAATGTGCATAATCACATCCTCAATAATCTTACGAAGTTGCTATCCACAAGAAGGCTTTaGCATCTTGCTGTGTTTGAC +
Preference number: 5 (lower is better)
Translates to: HLLINVHNHILNNLTKLLSTRRL*HLAVFD
Trigger: GTCAAACACAGCAAGATGCAAAAGCCTTCTTGTGGA...TAGCAACTTCGTAAGATTATTGAGGATGTGATTATGCACATTGATCAGTAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR CAA 90 bp ATTTTGGCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTTCCACAAGAAGGCTTTaGCATCTTGCTGTGTTTGAC +
Preference number: 5 (lower is better)
Translates to: ILAHQTHQIGSRINPYQTSTRRL*HLAVFD
Trigger: GTCAAACACAGCAAGATGCAAAAGCCTTCTTGTGGA...AGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGCCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317627.5
ENST00000398634.7
CDS-3UTR CAA 90 bp GCACACCAAACACACCAAATTGGAAGTAGAATTAATCCTTACCAAACTCATCCAGTCTCACTCCACTTATaGGAGACCACTCTTATTAAT +
Preference number: 5 (lower is better)
Translates to: AHQTHQIGSRINPYQTHPVSLHL*ETTLIN
Trigger: ATTAATAAGAGTGGTCTCCAATAAGTGGAGTGAGAC...TGGATGAGTTTGGTAAGGATTAATTCTACTTCCAATTTGGTGTGTTTGGTGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS-3UTR CAA 90 bp GAAGTAGAATTAATCCTTACCAAACTCATCCAAAAAGCAAAGGTTGAGTTGGTGGTCTCACTCCACTTATaGGAGACCACTCTTATTAAT +
Preference number: 5 (lower is better)
Translates to: EVELILTKLIQKAKVELVVSLHL*ETTLIN
Trigger: ATTAATAAGAGTGGTCTCCAATAAGTGGAGTGAGAC...CACCAACTCAACCTTTGCTTTTTGGATGAGTTTGGTAAGGATTAATTCTACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000615983.1
CDS CCA 72 bp CACCAGTCACCTGATGCTTATCTTCCTTTTCCTCCATaGGCCTCTACGGCACCAGGCAGCGAGGAGCCTCCT +
Preference number: 6 (lower is better)
Translates to: HQSPDAYLPFPP*ASTAPGSEEPP
Trigger: AGGAGGCTCCTCGCTGCCTGGTGCCGTAGAGGCCCATGGAGGAAAAGGAAGATAAGCATCAGGTGACTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317627.5
CDS CCA 72 bp TTTTATGCTGTTGATGCTTATCTTCCTTTTCCTCCATaGGCCTCTACGGCACCAGGCAGCGAGGAGCCTCCT +
Preference number: 6 (lower is better)
Translates to: FYAVDAYLPFPP*ASTAPGSEEPP
Trigger: AGGAGGCTCCTCGCTGCCTGGTGCCGTAGAGGCCCATGGAGGAAAAGGAAGATAAGCATCAACAGCATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398634.7
ENST00000405749.5
CDS CCA 72 bp TTCCTGCACTGTGGCACAGGACCACTGTTACAGTCTTaGCTCCTTTTCTCAAGGTTTCATCCAAGGTCACAC +
Preference number: 6 (lower is better)
Translates to: FLHCGTGPLLQS*LLFSRFHPRSH
Trigger: GTGTGACCTTGGATGAAACCTTGAGAAAAGGAGCCAAGACTGTAACAGTGGTCCTGTGCCACAGTGCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491538.1
CDS CAA 72 bp CTTCCTGCACTGTGGCACAGGACCACTGTTACAGTCTaGGCTCCTTTTCTCAAGGTTTCATCCAAGGTCACA +
Preference number: 6 (lower is better)
Translates to: LPALWHRTTVTV*APFLKVSSKVT
Trigger: TGTGACCTTGGATGAAACCTTGAGAAAAGGAGCCAAGACTGTAACAGTGGTCCTGTGCCACAGTGCAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491538.1
CDS CCA 72 bp CTTGCTGTGTTTGACTGGCAAAACCAGTGGACACGATaGTTTTTGGAAGTCACTCCTCTGGGTGCTCTTAGA +
Preference number: 6 (lower is better)
Translates to: LAVFDWQNQWTR*FLEVTPLGALR
Trigger: TCTAAGAGCACCCAGAGGAGTGACTTCCAAAAACCATCGTGTCCACTGGTTTTGCCAGTCAAACACAGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000405749.5
ENST00000414747.5
ENST00000447328.5
ENST00000486488.5
ENST00000615983.1
CDS CAA 72 bp AAAAAGAGCAAGCTCCTGGGAAAAGCCGTTGCTGACTaGCATCCACCTTCTGGCCCTGGAATTTCTTACTTC +
Preference number: 6 (lower is better)
Translates to: KKSKLLGKAVAD*HPPSGPGISYF
Trigger: GAAGTAAGAAATTCCAGGGCCAGAAGGTGGATGCAAGTCAGCAACGGCTTTTCCCAGGAGCTTGCTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486488.5
CDS CAA 90 bp ATGCTGTCCAAAAAGAGCAAGCTCCTGGGAAAAGCCGTTGCTGACTaGCATCCACCTTCTGGCCCTGGAATTTCTTACTTCATTTCACCA +
Preference number: 6 (lower is better)
Translates to: MLSKKSKLLGKAVAD*HPPSGPGISYFISP
Trigger: TGGTGAAATGAAGTAAGAAATTCCAGGGCCAGAAGGTGGATGCAAGTCAGCAACGGCTTTTCCCAGGAGCTTGCTCTTTTTGGACAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486488.5
CDS GCA 72 bp GGAGAGGCAAGTGGTACTATTCCACAAGAAGGCTTTTaGATCTTGCTGTGTTTGACTGGCAAAACCAGTGGA +
Preference number: 6 (lower is better)
Translates to: GEASGTIPQEGF*ILLCLTGKTSG
Trigger: TCCACTGGTTTTGCCAGTCAAACACAGCAAGATGCAAAAGCCTTCTTGTGGAATAGTACCACTTGCCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000447328.5
ENST00000486488.5
CDS CCA 72 bp TTCCTGCACTGTGGCACAGGACCACTGTTACAGTCTTaGCTCCTTTTCTCAAGGTTTCATCTATTCCACAAG +
Preference number: 6 (lower is better)
Translates to: FLHCGTGPLLQS*LLFSRFHLFHK
Trigger: CTTGTGGAATAGATGAAACCTTGAGAAAAGGAGCCAAGACTGTAACAGTGGTCCTGTGCCACAGTGCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405749.5
CDS CCA 72 bp CATCTCTGCTCCTTTAGGAACTGTTGGCCTACTGCCTaGTTTTATCTCTCTCTGTACAAAAGCTCCGTGTCT +
Preference number: 6 (lower is better)
Translates to: HLCSFRNCWPTA*FYLSLYKSSVS
Trigger: AGACACGGAGCTTTTGTACAGAGAGAGATAAAACCAGGCAGTAGGCCAACAGTTCCTAAAGGAGCAGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414747.5
CDS CCA 72 bp CTTCTCTGCTCCTTTAGGAACTGTTGGCCTACTGCCTaGTTTTATCTCTCTCTGTACAAAAGCTCCGTGTCT +
Preference number: 6 (lower is better)
Translates to: LLCSFRNCWPTA*FYLSLYKSSVS
Trigger: AGACACGGAGCTTTTGTACAGAGAGAGATAAAACCAGGCAGTAGGCCAACAGTTCCTAAAGGAGCAGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491538.1
CDS CCA 72 bp AACAGGGCCTCTCTTCTCTGCTCCTTTAGGAACTGTTaGCCTACTGCCTGGTTTTATCTCTCTCTGTACAAA +
Preference number: 6 (lower is better)
Translates to: NRASLLCSFRNC*PTAWFYLSLYK
Trigger: TTTGTACAGAGAGAGATAAAACCAGGCAGTAGGCCAACAGTTCCTAAAGGAGCAGAGAAGAGAGGCCCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491538.1
CDS CAA 72 bp AGGAGAGGCAAGTGGTACTATTCCACAAGAAGGCTTTaGCATCTTGCTGTGTTTGACTGGCAAAACCAGTGG +
Preference number: 6 (lower is better)
Translates to: RRGKWYYSTRRL*HLAVFDWQNQW
Trigger: CCACTGGTTTTGCCAGTCAAACACAGCAAGATGCAAAAGCCTTCTTGTGGAATAGTACCACTTGCCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317627.5
ENST00000398634.7
ENST00000447328.5
ENST00000486488.5
CDS CAA 72 bp CTTCCTGCACTGTGGCACAGGACCACTGTTACAGTCTaGGCTCCTTTTCTCAAGGTTTCATCTATTCCACAA +
Preference number: 6 (lower is better)
Translates to: LPALWHRTTVTV*APFLKVSSIPQ
Trigger: TTGTGGAATAGATGAAACCTTGAGAAAAGGAGCCAAGACTGTAACAGTGGTCCTGTGCCACAGTGCAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405749.5
CDS CAA 72 bp TTGCCTCCCAATTTCCACTACCAGAGCCAAAAGTCTTaGGCATCTGTCATAGTAACTCACGCATTTCCCTGG +
Preference number: 6 (lower is better)
Translates to: LPPNFHYQSQKS*ASVIVTHAFPW
Trigger: CCAGGGAAATGCGTGAGTTACTATGACAGATGCCAAAGACTTTTGGCTCTGGTAGTGGAAATTGGGAGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486488.5
CDS CAA 90 bp TTGCATCCACCTTCTGGCCCTGGAATTTCTTACTTCATTTCACCATaGCCTCCCAATTTCCACTACCAGAGCCAAAAGTCTTTGGCATCT +
Preference number: 6 (lower is better)
Translates to: LHPPSGPGISYFISP*PPNFHYQSQKSLAS
Trigger: AGATGCCAAAGACTTTTGGCTCTGGTAGTGGAAATTGGGAGGCAATGGTGAAATGAAGTAAGAAATTCCAGGGCCAGAAGGTGGATGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486488.5
CDS CAA 90 bp ATTTCACCATTGCCTCCCAATTTCCACTACCAGAGCCAAAAGTCTTaGGCATCTGTCATAGTAACTCACGCATTTCCCTGGATAACGGAA +
Preference number: 6 (lower is better)
Translates to: ISPLPPNFHYQSQKS*ASVIVTHAFPWITE
Trigger: TTCCGTTATCCAGGGAAATGCGTGAGTTACTATGACAGATGCCAAAGACTTTTGGCTCTGGTAGTGGAAATTGGGAGGCAATGGTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486488.5
CDS GCA 72 bp CTTCTGGCCCTGGAATTTCTTACTTCATTTCACCATTaGCTCCCAATTTCCACTACCAGAGCCAAAAGTCTT +
Preference number: 6 (lower is better)
Translates to: LLALEFLTSFHH*LPISTTRAKSL
Trigger: AAGACTTTTGGCTCTGGTAGTGGAAATTGGGAGGCAATGGTGAAATGAAGTAAGAAATTCCAGGGCCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486488.5
CDS TCA 72 bp GGTTTCATCCAAGGTCACACAGCTCAAGGAATGAAGTaGAGCCAACATTCCAACTCTAGTTTGTTTGATTCC +
Preference number: 6 (lower is better)
Translates to: GFIQGHTAQGMK*SQHSNSSLFDS
Trigger: GGAATCAAACAAACTAGAGTTGGAATGTTGGCTTCACTTCATTCCTTGAGCTGTGTGACCTTGGATGAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491538.1
CDS TCA 72 bp CTCAAGGTTTCATCCAAGGTCACACAGCTCAAGGAATaGAGTGAAGCCAACATTCCAACTCTAGTTTGTTTG +
Preference number: 6 (lower is better)
Translates to: LKVSSKVTQLKE*SEANIPTLVCL
Trigger: CAAACAAACTAGAGTTGGAATGTTGGCTTCACTTCATTCCTTGAGCTGTGTGACCTTGGATGAAACCTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491538.1