RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C2ORF72 (Homo sapiens)

Ensembl gene IDs: ENSG00000204128

Ensembl transcript IDs: ENST00000373640.5, ENST00000463834.1, ENST00000477463.1

Found 246 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTCACCCGGCTGGAGGCCTCTCGCCGATGGCTCCCAGGGACCACTaGCCTAATCAAGGGCCTCCTCCTTCACACGCCACCCTCCACCCC +
Preference number: 1 (lower is better)
Translates to: CHPAGGLSPMAPRDH*PNQGPPPSHATLHP
Trigger: GGGGTGGAGGGTGGCGTGTGAAGGAGGAGGCCCTTGATTAGGTCAGTGGTCCCTGGGAGCCATCGGCGAGAGGCCTCCAGCCGGGTGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR GCA 90 bp GCTGGTAACTGTGAGTGTGGCAGGCCTCCAGCAGGCGGGGGTTTCTaGAGTCTCCATGGAGACCTGGGGGCCAGTAAGACGGAGCCAGGC +
Preference number: 1 (lower is better)
Translates to: AGNCECGRPPAGGGF*SLHGDLGASKTEPG
Trigger: GCCTGGCTCCGTCTTACTGGCCCCCAGGTCTCCATGGAGACTGCAGAAACCCCCGCCTGCTGGAGGCCTGCCACACTCACAGTTACCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CCA 90 bp TACCCGAGAGCCCAGACTGTCACCCGGCTGGAGGCCTCTCGCCGATaGCTCCCAGGGACCACTGACCTAATCAAGGGCCTCCTCCTTCAC +
Preference number: 1 (lower is better)
Translates to: YPRAQTVTRLEASRR*LPGTTDLIKGLLLH
Trigger: GTGAAGGAGGAGGCCCTTGATTAGGTCAGTGGTCCCTGGGAGCCATCGGCGAGAGGCCTCCAGCCGGGTGACAGTCTGGGCTCTCGGGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR GCA 90 bp GCTCTTTGTTCTCACCGGCATGTGTGGCTATTTCTGTCCTGGCCCTaGAGCACGCAGACCGTCTTGGCCCTGGCCCGACAAGCCCCCAAG +
Preference number: 1 (lower is better)
Translates to: ALCSHRHVWLFLSWP*STQTVLALARQAPK
Trigger: CTTGGGGGCTTGTCGGGCCAGGGCCAAGACGGTCTGCGTGCTGCAGGGCCAGGACAGAAATAGCCACACATGCCGGTGAGAACAAAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CCA 90 bp AAAGAGGCTCTTTGTTCTCACCGGCATGTGTGGCTATTTCTGTCCTaGCCCTGCAGCACGCAGACCGTCTTGGCCCTGGCCCGACAAGCC +
Preference number: 1 (lower is better)
Translates to: KEALCSHRHVWLFLS*PCSTQTVLALARQA
Trigger: GGCTTGTCGGGCCAGGGCCAAGACGGTCTGCGTGCTGCAGGGCCAGGACAGAAATAGCCACACATGCCGGTGAGAACAAAGAGCCTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR GCA 90 bp AGCTGCACTCTCAACGATGGGTGCCCATGCATGTGCCCAGAACACTaGAGACACACCATGGGGTGCCACAGCTCTGCAGAGCCTCAAAGC +
Preference number: 1 (lower is better)
Translates to: SCTLNDGCPCMCPEH*RHTMGCHSSAEPQS
Trigger: GCTTTGAGGCTCTGCAGAGCTGTGGCACCCCATGGTGTGTCTGCAGTGTTCTGGGCACATGCATGGGCACCCATCGTTGAGAGTGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CCA 90 bp GGCTATTTCTGTCCTGGCCCTGCAGCACGCAGACCGTCTTGGCCCTaGCCCGACAAGCCCCCAAGGCAACAGTGTAGTCTTTATTTTGGC +
Preference number: 1 (lower is better)
Translates to: GYFCPGPAARRPSWP*PDKPPRQQCSLYFG
Trigger: GCCAAAATAAAGACTACACTGTTGCCTTGGGGGCTTGTCGGGCCAGGGCCAAGACGGTCTGCGTGCTGCAGGGCCAGGACAGAAATAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR GCA 90 bp AGAGTTCTTCCCAGCTGCACTCTCAACGATGGGTGCCCATGCATGTaGCCAGAACACTGCAGACACACCATGGGGTGCCACAGCTCTGCA +
Preference number: 1 (lower is better)
Translates to: RVLPSCTLNDGCPCM*PEHCRHTMGCHSSA
Trigger: TGCAGAGCTGTGGCACCCCATGGTGTGTCTGCAGTGTTCTGGGCACATGCATGGGCACCCATCGTTGAGAGTGCAGCTGGGAAGAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR GCA 90 bp TGGTTCAGAGTTCTTCCCAGCTGCACTCTCAACGATGGGTGCCCATaGATGTGCCCAGAACACTGCAGACACACCATGGGGTGCCACAGC +
Preference number: 1 (lower is better)
Translates to: WFRVLPSCTLNDGCP*MCPEHCRHTMGCHS
Trigger: GCTGTGGCACCCCATGGTGTGTCTGCAGTGTTCTGGGCACATGCATGGGCACCCATCGTTGAGAGTGCAGCTGGGAAGAACTCTGAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR GCA 90 bp CCCCTCAACACACACACATTTCCAATGCTGCCTGGAGGGACAACCTaGCCCTGGTTTAAAGCCACTGGGCTGGTGGCCCCCTCATGCATT +
Preference number: 1 (lower is better)
Translates to: PLNTHTFPMLPGGTT*PWFKATGLVAPSCI
Trigger: AATGCATGAGGGGGCCACCAGCCCAGTGGCTTTAAACCAGGGGCAGGTTGTCCCTCCAGGCAGCATTGGAAATGTGTGTGTGTTGAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR GCA 90 bp GGCCCGACAAGCCCCCAAGGCAACAGTGTAGTCTTTATTTTGGCTTaGTCTGGGAGCCAAGGTCCAGGGAAGCCTGACCCTCTCTGCTCT +
Preference number: 1 (lower is better)
Translates to: GPTSPQGNSVVFILA*SGSQGPGKPDPLCS
Trigger: AGAGCAGAGAGGGTCAGGCTTCCCTGGACCTTGGCTCCCAGAGCAAGCCAAAATAAAGACTACACTGTTGCCTTGGGGGCTTGTCGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CCA 90 bp ATGTGTGGCTATTTCTGTCCTGGCCCTGCAGCACGCAGACCGTCTTaGCCCTGGCCCGACAAGCCCCCAAGGCAACAGTGTAGTCTTTAT +
Preference number: 1 (lower is better)
Translates to: MCGYFCPGPAARRPS*PWPDKPPRQQCSLY
Trigger: ATAAAGACTACACTGTTGCCTTGGGGGCTTGTCGGGCCAGGGCCAAGACGGTCTGCGTGCTGCAGGGCCAGGACAGAAATAGCCACACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR GCA 90 bp GACTTCTGGTTCAGAGTTCTTCCCAGCTGCACTCTCAACGATGGGTaGCCATGCATGTGCCCAGAACACTGCAGACACACCATGGGGTGC +
Preference number: 1 (lower is better)
Translates to: DFWFRVLPSCTLNDG*PCMCPEHCRHTMGC
Trigger: GCACCCCATGGTGTGTCTGCAGTGTTCTGGGCACATGCATGGGCACCCATCGTTGAGAGTGCAGCTGGGAAGAACTCTGAACCAGAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR GCA 90 bp TGGACCAATTCTTTGCTGTCAGAGACTGTTCTGCACATTGTGGGATaGCCACTAGATGCCAGGGGTGCCCCCACAGTCACTGTGACCCCC +
Preference number: 1 (lower is better)
Translates to: WTNSLLSETVLHIVG*PLDARGAPTVTVTP
Trigger: GGGGGTCACAGTGACTGTGGGGGCACCCCTGGCATCTAGTGGGCATCCCACAATGTGCAGAACAGTCTCTGACAGCAAAGAATTGGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR GCA 90 bp CCATGCCTCAGCTCTGATGACTTCTGGTTCAGAGTTCTTCCCAGCTaGACTCTCAACGATGGGTGCCCATGCATGTGCCCAGAACACTGC +
Preference number: 1 (lower is better)
Translates to: PCLSSDDFWFRVLPS*TLNDGCPCMCPEHC
Trigger: GCAGTGTTCTGGGCACATGCATGGGCACCCATCGTTGAGAGTGCAGCTGGGAAGAACTCTGAACCAGAAGTCATCAGAGCTGAGGCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CCA 90 bp GTAAACCATCCTTTGGAGCAGAGGCTACAAACTCACATGCCCGCCTaGACCAGCACCGGGCAGACGTCTTACATGAGTGAAGTGCAGTGG +
Preference number: 1 (lower is better)
Translates to: VNHPLEQRLQTHMPA*TSTGQTSYMSEVQW
Trigger: CCACTGCACTTCACTCATGTAAGACGTCTGCCCGGTGCTGGTCCAGGCGGGCATGTGAGTTTGTAGCCTCTGCTCCAAAGGATGGTTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CCA 90 bp AACACACACACATTTCCAATGCTGCCTGGAGGGACAACCTGCCCCTaGTTTAAAGCCACTGGGCTGGTGGCCCCCTCATGCATTTGTGAA +
Preference number: 1 (lower is better)
Translates to: NTHTFPMLPGGTTCP*FKATGLVAPSCICE
Trigger: TTCACAAATGCATGAGGGGGCCACCAGCCCAGTGGCTTTAAACCAGGGGCAGGTTGTCCCTCCAGGCAGCATTGGAAATGTGTGTGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CCA 90 bp GTCAACATGAGAAAGAAAGAGGCTCTTTGTTCTCACCGGCATGTGTaGCTATTTCTGTCCTGGCCCTGCAGCACGCAGACCGTCTTGGCC +
Preference number: 1 (lower is better)
Translates to: VNMRKKEALCSHRHV*LFLSWPCSTQTVLA
Trigger: GGCCAAGACGGTCTGCGTGCTGCAGGGCCAGGACAGAAATAGCCACACATGCCGGTGAGAACAAAGAGCCTCTTTCTTTCTCATGTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR TCA 90 bp GTCCCTACAACGATGATGCTTATGGTGGCCACATCTCAAAGAAGCTaGGAGGGATCTCAGCCCCGTATTGTCACTTGGGAGGCAGAACCC +
Preference number: 1 (lower is better)
Translates to: VPTTMMLMVATSQRS*EGSQPRIVTWEAEP
Trigger: GGGTTCTGCCTCCCAAGTGACAATACGGGGCTGAGATCCCTCTCAGCTTCTTTGAGATGTGGCCACCATAAGCATCATCGTTGTAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CCA 90 bp CCCTCCAGGGAAATCCAGGAGCTGCCTTTGCCATTCCGAAGACTCTaGATTTCTCCAAGGCAGGCAAAGAAGACAAGGGAGGTAATGGTG +
Preference number: 1 (lower is better)
Translates to: PSREIQELPLPFRRL*ISPRQAKKTREVMV
Trigger: CACCATTACCTCCCTTGTCTTCTTTGCCTGCCTTGGAGAAATCCAGAGTCTTCGGAATGGCAAAGGCAGCTCCTGGATTTCCCTGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR TCA 90 bp AGTGGCTCAGAGAAACCGAGACAGAGAGACAAAATAACCTCCCTGTaGTCAGACTTAGCAAATGCTGGGTGGGGAGTAGGTTCCCAGGGG +
Preference number: 1 (lower is better)
Translates to: SGSEKPRQRDKITSL*SDLANAGWGVGSQG
Trigger: CCCCTGGGAACCTACTCCCCACCCAGCATTTGCTAAGTCTGATCACAGGGAGGTTATTTTGTCTCTCTGTCTCGGTTTCTCTGAGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR TCA 90 bp GTGGCCCCCTCATGCATTTGTGAAACAGAAGCCCCAGAGACTGAGTaGCATGTTCAAGGCCATGCCTCAGCTCTGATGACTTCTGGTTCA +
Preference number: 1 (lower is better)
Translates to: VAPSCICETEAPETE*HVQGHASALMTSGS
Trigger: TGAACCAGAAGTCATCAGAGCTGAGGCATGGCCTTGAACATGTCACTCAGTCTCTGGGGCTTCTGTTTCACAAATGCATGAGGGGGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR GCA 90 bp ACCGAGCAAATAGTAGGCGCAGTTGTGTGTCTGCTGCGTAAACTGTaGATCATGAATGAAGGGAGCTACTTCCCTCAGCTAGTGCCTCCC +
Preference number: 1 (lower is better)
Translates to: TEQIVGAVVCLLRKL*IMNEGSYFPQLVPP
Trigger: GGGAGGCACTAGCTGAGGGAAGTAGCTCCCTTCATTCATGATGCACAGTTTACGCAGCAGACACACAACTGCGCCTACTATTTGCTCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR TCA 90 bp GGCAGGGAAGGAATAGGATTAGACTCCCTATTATGGAGAATAGGTTaGGGCACAGAGCAGGAAGGGCCCCTTCTTAATATCATAGAGCCC +
Preference number: 1 (lower is better)
Translates to: GREGIGLDSLLWRIG*GTEQEGPLLNIIEP
Trigger: GGGCTCTATGATATTAAGAAGGGGCCCTTCCTGCTCTGTGCCTCAACCTATTCTCCATAATAGGGAGTCTAATCCTATTCCTTCCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR TCA 90 bp AAACAGGTTTCCCATTGCACCATTTGGCACTATCCTGGAGAGAGCTaGAATAACAAATCAAAGTTAGGCAGCACCTTGCAGGGCACCGAG +
Preference number: 1 (lower is better)
Translates to: KQVSHCTIWHYPGES*NNKSKLGSTLQGTE
Trigger: CTCGGTGCCCTGCAAGGTGCTGCCTAACTTTGATTTGTTATTTCAGCTCTCTCCAGGATAGTGCCAAATGGTGCAATGGGAAACCTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR TCA 90 bp CATCCTTATACCCAAAGGACTTGGCACAGAAAGTCGATGTCAACATaGGAAAGAAAGAGGCTCTTTGTTCTCACCGGCATGTGTGGCTAT +
Preference number: 1 (lower is better)
Translates to: HPYTQRTWHRKSMST*ERKRLFVLTGMCGY
Trigger: ATAGCCACACATGCCGGTGAGAACAAAGAGCCTCTTTCTTTCTCATGTTGACATCGACTTTCTGTGCCAAGTCCTTTGGGTATAAGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR GCA 90 bp TTAGATATGAGAATTATCAATTCAAGTCAGAAGTGCCACAACCACTaGCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCACCC +
Preference number: 1 (lower is better)
Translates to: LDMRIINSSQKCHNH*HIRKISTREPRLSP
Trigger: GGGTGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCAGTGGTTGTGGCACTTCTGACTTGAATTGATAATTCTCATATCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR GCA 90 bp AAATATTGGCAATACATACAAAAGGTTATGAAGCCTTATAACTTCTaGCTTAGGCAAATTCCAAACTTAAACAAAGCTCCCTCTCCCACT +
Preference number: 1 (lower is better)
Translates to: KYWQYIQKVMKPYNF*LRQIPNLNKAPSPT
Trigger: AGTGGGAGAGGGAGCTTTGTTTAAGTTTGGAATTTGCCTAAGGCAGAAGTTATAAGGCTTCATAACCTTTTGTATGTATTGCCAATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CCA 90 bp GTGGCTATTTCTGTCCTGGCCCTGCAGCACGCAGACCGTCTTGGCCCTGGCCCGATTTCCAATGCTGCCTaGAGGGACAACCTGCCCCTG +
Preference number: 2 (lower is better)
Translates to: VAISVLALQHADRLGPGPISNAA*RDNLPL
Trigger: CAGGGGCAGGTTGTCCCTCCAGGCAGCATTGGAAAT...CGGGCCAGGGCCAAGACGGTCTGCGTGCTGCAGGGCCAGGACAGAAATAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CAA 90 bp GGCCCTGGCCCGACAAGCCCCCAAGGCAACAGTGTAGTCTTTATTTaGGCTTGCTCTGGGAGCCAAGGTCCAGGGAAGCCTGACCCTCTC +
Preference number: 2 (lower is better)
Translates to: GPGPTSPQGNSVVFI*ACSGSQGPGKPDPL
Trigger: GAGAGGGTCAGGCTTCCCTGGACCTTGGCTCCCAGAGCAAGCCAAAATAAAGACTACACTGTTGCCTTGGGGGCTTGTCGGGCCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR GCA 90 bp GGCTCTTTGTTCTCACCGGCATGTGTGGCTATTTCTGTCCTGGCCCTGCAGCACGGGTGCCCATGCATGTaGCCAGAACACTGCAGACAC +
Preference number: 2 (lower is better)
Translates to: GSLFSPACVAISVLALQHGCPCM*PEHCRH
Trigger: GTGTCTGCAGTGTTCTGGGCACATGCATGGGCACCC...GTGCTGCAGGGCCAGGACAGAAATAGCCACACATGCCGGTGAGAACAAAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CCA 90 bp CTGGAGGGACAACCTGCCCCTGGTTTAAAGCCACTGGGCTGGTGGCCCCCTCATAGCCATCTGTCTCAGTaGCTCAGAGAAACCGAGACA +
Preference number: 2 (lower is better)
Translates to: LEGQPAPGLKPLGWWPPHSHLSQ*LRETET
Trigger: TGTCTCGGTTTCTCTGAGCCACTGAGACAGATGGCT...ATGAGGGGGCCACCAGCCCAGTGGCTTTAAACCAGGGGCAGGTTGTCCCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CCA 90 bp GGCTCTTTGTTCTCACCGGCATGTGTGGCTATTTCTGTCCTGGCCCTGCAGCACAAGCCACTGGGCTGGTaGCCCCCTCATGCATTTGTG +
Preference number: 2 (lower is better)
Translates to: GSLFSPACVAISVLALQHKPLGW*PPHAFV
Trigger: CACAAATGCATGAGGGGGCCACCAGCCCAGTGGCTT...GTGCTGCAGGGCCAGGACAGAAATAGCCACACATGCCGGTGAGAACAAAGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR GCA 90 bp ATCCAGGAGCTGCCTTTGCCATTCCGAAGACTCTGGATTTCTCCAAGGCAGGCAGGGGTGCCACAGCTCTaGAGAGCCTCAAAGCGGACA +
Preference number: 2 (lower is better)
Translates to: IQELPLPFRRLWISPRQAGVPQL*RASKRT
Trigger: TGTCCGCTTTGAGGCTCTGCAGAGCTGTGGCACCCC...TGCCTGCCTTGGAGAAATCCAGAGTCTTCGGAATGGCAAAGGCAGCTCCTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CCA 90 bp TGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCACCCGGCTGGAGGGTCTCCATGGAGACCTaGGGGCCAGTAAGACGGAGC +
Preference number: 2 (lower is better)
Translates to: CHIRKISTREPRLSPGWRVSMET*GPVRRS
Trigger: GCTCCGTCTTACTGGCCCCCAGGTCTCCATGGAGAC...CCTCCAGCCGGGTGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CCA 90 bp CCCTGGCCCGACAAGCCCCCAAGGCAACAGTGTAGTCTTTATTTTGGCTTGCTCCTGCACTCTCAACGATaGGTGCCCATGCATGTGCCC +
Preference number: 2 (lower is better)
Translates to: PWPDKPPRQQCSLYFGLLLHSQR*VPMHVP
Trigger: GGGCACATGCATGGGCACCCATCGTTGAGAGTGCAG...GAGCAAGCCAAAATAAAGACTACACTGTTGCCTTGGGGGCTTGTCGGGCCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR TCA 90 bp GTGGCTATTTCTGTCCTGGCCCTGCAGCACGCAGACCGTCTTGGCCCTGGCCCGAAAATAACCTCCCTGTaGTCAGACTTAGCAAATGCT +
Preference number: 2 (lower is better)
Translates to: VAISVLALQHADRLGPGPKITSL*SDLANA
Trigger: AGCATTTGCTAAGTCTGATCACAGGGAGGTTATTTT...CGGGCCAGGGCCAAGACGGTCTGCGTGCTGCAGGGCCAGGACAGAAATAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR GCA 90 bp CCCTGGCCCGACAAGCCCCCAAGGCAACAGTGTAGTCTTTATTTTGGCTTGCTCATGTGCCCAGAACACTaGAGACACACCATGGGGTGC +
Preference number: 2 (lower is better)
Translates to: PWPDKPPRQQCSLYFGLLMCPEH*RHTMGC
Trigger: GCACCCCATGGTGTGTCTGCAGTGTTCTGGGCACAT...GAGCAAGCCAAAATAAAGACTACACTGTTGCCTTGGGGGCTTGTCGGGCCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CCA 90 bp GATTCCAGAACCTCACAGAAACAGAGAGCCCGGAGGGGCTGTGTTTGCATTGAGACTGCAGACACACCATaGGGTGCCACAGCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: DSRTSQKQRARRGCVCIETADTP*GATALQ
Trigger: CTGCAGAGCTGTGGCACCCCATGGTGTGTCTGCAGT...CTCAATGCAAACACAGCCCCTCCGGGCTCTCTGTTTCTGTGAGGTTCTGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR GCA 90 bp GGCTCTTTGTTCTCACCGGCATGTGTGGCTATTTCTGTCCTGGCCCTGCAGCACCACACACATTTCCAATaGTGCCTGGAGGGACAACCT +
Preference number: 2 (lower is better)
Translates to: GSLFSPACVAISVLALQHHTHFQ*CLEGQP
Trigger: AGGTTGTCCCTCCAGGCAGCATTGGAAATGTGTGTG...GTGCTGCAGGGCCAGGACAGAAATAGCCACACATGCCGGTGAGAACAAAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR GCA 90 bp ACTGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCACCCGGCTGGATTTCTGTCCTGGCCCTaGAGCACGCAGACCGTCTTG +
Preference number: 2 (lower is better)
Translates to: TAILERLVPESPDCHPAGFLSWP*STQTVL
Trigger: CAAGACGGTCTGCGTGCTGCAGGGCCAGGACAGAAA...TCCAGCCGGGTGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR TCA 90 bp ATCCAGGAGCTGCCTTTGCCATTCCGAAGACTCTGGATTTCTCCAAGGCAGGCAAGAAGCCCCAGAGACTaGGTGACATGTTCAAGGCCA +
Preference number: 2 (lower is better)
Translates to: IQELPLPFRRLWISPRQARSPRD*VTCSRP
Trigger: TGGCCTTGAACATGTCACTCAGTCTCTGGGGCTTCT...TGCCTGCCTTGGAGAAATCCAGAGTCTTCGGAATGGCAAAGGCAGCTCCTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR GCA 90 bp AGCAATGAGACTGTCCCTACAACGATGATGCTTATGGTGGCCACATCTCAAAGAGGGATGCCCACTAGATaGCAGGGGTGCCCCCACAGT +
Preference number: 2 (lower is better)
Translates to: SNETVPTTMMLMVATSQRGMPTR*QGCPHS
Trigger: ACTGTGGGGGCACCCCTGGCATCTAGTGGGCATCCC...TCTTTGAGATGTGGCCACCATAAGCATCATCGTTGTAGGGACAGTCTCATTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CCA 90 bp GGCTCTTTGTTCTCACCGGCATGTGTGGCTATTTCTGTCCTGGCCCTGCAGCACAGCTCTGATGACTTCTaGTTCAGAGTTCTTCCCAGC +
Preference number: 2 (lower is better)
Translates to: GSLFSPACVAISVLALQHSSDDF*FRVLPS
Trigger: GCTGGGAAGAACTCTGAACCAGAAGTCATCAGAGCT...GTGCTGCAGGGCCAGGACAGAAATAGCCACACATGCCGGTGAGAACAAAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CCA 90 bp AGGATTAGACTCCCTATTATGGAGAATAGGTTGAGGCACAGAGCAGGAAGGGCCGGGACAACCTGCCCCTaGTTTAAAGCCACTGGGCTG +
Preference number: 2 (lower is better)
Translates to: RIRLPIMENRLRHRAGRAGTTCP*FKATGL
Trigger: CAGCCCAGTGGCTTTAAACCAGGGGCAGGTTGTCCC...GGCCCTTCCTGCTCTGTGCCTCAACCTATTCTCCATAATAGGGAGTCTAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CCA 90 bp AGGAATAGGATTAGACTCCCTATTATGGAGAATAGGTTGAGGCACAGAGCAGGAAGACCGTCTTGGCCCTaGCCCGACAAGCCCCCAAGG +
Preference number: 2 (lower is better)
Translates to: RNRIRLPIMENRLRHRAGRPSWP*PDKPPR
Trigger: CCTTGGGGGCTTGTCGGGCCAGGGCCAAGACGGTCT...TCCTGCTCTGTGCCTCAACCTATTCTCCATAATAGGGAGTCTAATCCTATTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CCA 90 bp AAAGGACTTGGCACAGAAAGTCGATGTCAACATGAGAAAGAAAGAGGCTCTTTGGCACGCAGACCGTCTTaGCCCTGGCCCGACAAGCCC +
Preference number: 2 (lower is better)
Translates to: KGLGTESRCQHEKERGSLARRPS*PWPDKP
Trigger: GGGCTTGTCGGGCCAGGGCCAAGACGGTCTGCGTGC...CAAAGAGCCTCTTTCTTTCTCATGTTGACATCGACTTTCTGTGCCAAGTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CAA 90 bp AGCCTGACCCTCTCTGCTCTGGGGGACTCTGACAGGGAGAAGGCATaGGCTCAGCCAGAATGTCTCAAAGGTACTACAATTGGCATTGAA +
Preference number: 2 (lower is better)
Translates to: SLTLSALGDSDREKA*AQPECLKGTTIGIE
Trigger: TTCAATGCCAATTGTAGTACCTTTGAGACATTCTGGCTGAGCCAATGCCTTCTCCCTGTCAGAGTCCCCCAGAGCAGAGAGGGTCAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR TCA 90 bp ACCCACCATCAAGATTGTCCTTTCTGGCACCTAACTCTTCTGTCTGCTAGAAGACCCCCACAGTCACTGTaGCCCCCTCAACACACACAC +
Preference number: 2 (lower is better)
Translates to: THHQDCPFWHLTLLSARRPPQSL*PPQHTH
Trigger: GTGTGTGTGTTGAGGGGGTCACAGTGACTGTGGGGG...TCTTCTAGCAGACAGAAGAGTTAGGTGCCAGAAAGGACAATCTTGATGGTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR TCA 90 bp TGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCACCCGGCTGGAGGTTATGGAGAATAGGTTaGGGCACAGAGCAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: CHIRKISTREPRLSPGWRLWRIG*GTEQEG
Trigger: CCCTTCCTGCTCTGTGCCTCAACCTATTCTCCATAA...CCTCCAGCCGGGTGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR GCA 90 bp ACATGTTCAAGGCCATGCCTCAGCTCTGATGACTTCTGGTTCAGAGTTCTTCCCAACGATGGGTGCCCATaGATGTGCCCAGAACACTGC +
Preference number: 2 (lower is better)
Translates to: TCSRPCLSSDDFWFRVLPNDGCP*MCPEHC
Trigger: GCAGTGTTCTGGGCACATGCATGGGCACCCATCGTT...GGGAAGAACTCTGAACCAGAAGTCATCAGAGCTGAGGCATGGCCTTGAACATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR GCA 90 bp ACTGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCACCCGGCTGGAGGGAAATCCAGGAGCTaGCTTTGCCATTCCGAAGAC +
Preference number: 2 (lower is better)
Translates to: TAILERLVPESPDCHPAGGKSRS*LCHSED
Trigger: GTCTTCGGAATGGCAAAGGCAGCTCCTGGATTTCCC...TCCAGCCGGGTGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CAA 90 bp CTTGGCACAGAAAGTCGATGTCAACATGAGAAAGAAAGAGGCTCTTaGTTCTCACCGGCATGTGTGGCTATTTCTGTCCTGGCCCTGCAG +
Preference number: 2 (lower is better)
Translates to: LGTESRCQHEKERGS*FSPACVAISVLALQ
Trigger: CTGCAGGGCCAGGACAGAAATAGCCACACATGCCGGTGAGAACAAAGAGCCTCTTTCTTTCTCATGTTGACATCGACTTTCTGTGCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR TCA 90 bp TGCCACAACCACTGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCACCCCTCATGCATTTGTaGAACAGAAGCCCCAGAGAC +
Preference number: 2 (lower is better)
Translates to: CHNHCHIRKISTREPRLSPLMHL*NRSPRD
Trigger: GTCTCTGGGGCTTCTGTTTCACAAATGCATGAGGGG...TGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCAGTGGTTGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR GCA 90 bp ATAATGTGTAAACCATCCTTTGGAGCAGAGGCTACAAACTCACATGCCCGCCTGACTCTCAACGATGGGTaGCCATGCATGTGCCCAGAA +
Preference number: 2 (lower is better)
Translates to: IMCKPSFGAEATNSHARLTLNDG*PCMCPE
Trigger: TTCTGGGCACATGCATGGGCACCCATCGTTGAGAGT...CAGGCGGGCATGTGAGTTTGTAGCCTCTGCTCCAAAGGATGGTTTACACATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR GCA 90 bp ATAATGTGTAAACCATCCTTTGGAGCAGAGGCTACAAACTCACATGCCCGCCTGAGAGTTCTTCCCAGCTaGACTCTCAACGATGGGTGC +
Preference number: 2 (lower is better)
Translates to: IMCKPSFGAEATNSHARLRVLPS*TLNDGC
Trigger: GCACCCATCGTTGAGAGTGCAGCTGGGAAGAACTCT...CAGGCGGGCATGTGAGTTTGTAGCCTCTGCTCCAAAGGATGGTTTACACATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR GCA 90 bp AGGATTAGACTCCCTATTATGGAGAATAGGTTGAGGCACAGAGCAGGAAGGGCCTGTCAGAGACTGTTCTaGACATTGTGGGATGCCCAC +
Preference number: 2 (lower is better)
Translates to: RIRLPIMENRLRHRAGRACQRLF*TLWDAH
Trigger: GTGGGCATCCCACAATGTGCAGAACAGTCTCTGACA...GGCCCTTCCTGCTCTGTGCCTCAACCTATTCTCCATAATAGGGAGTCTAATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR TCA 90 bp AAAGGACTTGGCACAGAAAGTCGATGTCAACATGAGAAAGAAAGAGGCTCTTTGGCCCCAGAGACTGAGTaGCATGTTCAAGGCCATGCC +
Preference number: 2 (lower is better)
Translates to: KGLGTESRCQHEKERGSLAPETE*HVQGHA
Trigger: GGCATGGCCTTGAACATGTCACTCAGTCTCTGGGGC...CAAAGAGCCTCTTTCTTTCTCATGTTGACATCGACTTTCTGTGCCAAGTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR TCA 90 bp TGCCACAACCACTGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCACTGTCCCTACAACGATaGTGCTTATGGTGGCCACAT +
Preference number: 2 (lower is better)
Translates to: CHNHCHIRKISTREPRLSLSLQR*CLWWPH
Trigger: ATGTGGCCACCATAAGCATCATCGTTGTAGGGACAG...TGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCAGTGGTTGTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR GCA 90 bp AACAGGTTTCCCATTGCACCATTTGGCACTATCCTGGAGAGAGCTGAAATAACACGGAGGGGCTGTGTTTaGATTGAGCTTGGGCTAGGA +
Preference number: 2 (lower is better)
Translates to: NRFPIAPFGTILERAEITRRGCV*IELGLG
Trigger: TCCTAGCCCAAGCTCAATGCAAACACAGCCCCTCCG...TGTTATTTCAGCTCTCTCCAGGATAGTGCCAAATGGTGCAATGGGAAACCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR GCA 90 bp TGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCACCCGGCTGGAGGAAACAGGTTTCCCATTaGACCATTTGGCACTATCCT +
Preference number: 2 (lower is better)
Translates to: CHIRKISTREPRLSPGWRKQVSH*TIWHYP
Trigger: AGGATAGTGCCAAATGGTGCAATGGGAAACCTGTTT...CCTCCAGCCGGGTGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR GCA 90 bp ACCCACCATCAAGATTGTCCTTTCTGGCACCTAACTCTTCTGTCTGCTAGAAGAAAGCCCCAAATGAGATaGCGTCCTCCTCATCCTCAC +
Preference number: 2 (lower is better)
Translates to: THHQDCPFWHLTLLSARRKPQMR*RPPHPH
Trigger: GTGAGGATGAGGAGGACGGCATCTCATTTGGGGCTT...TCTTCTAGCAGACAGAAGAGTTAGGTGCCAGAAAGGACAATCTTGATGGTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR GCA 90 bp AGCAATGAGACTGTCCCTACAACGATGATGCTTATGGTGGCCACATCTCAAAGACTTGAGATGACAGCATaGCCCATCCTCCACCCAGAA +
Preference number: 2 (lower is better)
Translates to: SNETVPTTMMLMVATSQRLEMTA*PILHPE
Trigger: TTCTGGGTGGAGGATGGGGCATGCTGTCATCTCAAG...TCTTTGAGATGTGGCCACCATAAGCATCATCGTTGTAGGGACAGTCTCATTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CCA 90 bp AGGAATAGGATTAGACTCCCTATTATGGAGAATAGGTTGAGGCACAGAGCAGGATTAGCAAATGCTGGGTaGGGAGTAGGTTCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: RNRIRLPIMENRLRHRAGLANAG*GVGSQG
Trigger: CCCCTGGGAACCTACTCCCCACCCAGCATTTGCTAA...TCCTGCTCTGTGCCTCAACCTATTCTCCATAATAGGGAGTCTAATCCTATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CCA 90 bp ATAGTAGGCGCAGTTGTGTGTCTGCTGCGTAAACTGTGCATCATGAATGAAGGGTATTTTGGCTTGCTCTaGGAGCCAAGGTCCAGGGAA +
Preference number: 2 (lower is better)
Translates to: IVGAVVCLLRKLCIMNEGYFGLL*EPRSRE
Trigger: TTCCCTGGACCTTGGCTCCCAGAGCAAGCCAAAATA...CCCTTCATTCATGATGCACAGTTTACGCAGCAGACACACAACTGCGCCTACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CCA 90 bp AGGAATAGGATTAGACTCCCTATTATGGAGAATAGGTTGAGGCACAGAGCAGGATCTCACCGGCATGTGTaGCTATTTCTGTCCTGGCCC +
Preference number: 2 (lower is better)
Translates to: RNRIRLPIMENRLRHRAGSHRHV*LFLSWP
Trigger: GGGCCAGGACAGAAATAGCCACACATGCCGGTGAGA...TCCTGCTCTGTGCCTCAACCTATTCTCCATAATAGGGAGTCTAATCCTATTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CCA 90 bp AGGAATAGGATTAGACTCCCTATTATGGAGAATAGGTTGAGGCACAGAGCAGGAATAGAGCCCCTCTGTTaGGTCAGACCAGAACTGGGG +
Preference number: 2 (lower is better)
Translates to: RNRIRLPIMENRLRHRAGIEPLC*VRPELG
Trigger: CCCCAGTTCTGGTCTGACCCAACAGAGGGGCTCTAT...TCCTGCTCTGTGCCTCAACCTATTCTCCATAATAGGGAGTCTAATCCTATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR GCA 90 bp AACAGGTTTCCCATTGCACCATTTGGCACTATCCTGGAGAGAGCTGAAATAACAACACATTTCCAATGCTaGCTGGAGGGACAACCTGCC +
Preference number: 2 (lower is better)
Translates to: NRFPIAPFGTILERAEITTHFQC*LEGQPA
Trigger: GGCAGGTTGTCCCTCCAGGCAGCATTGGAAATGTGT...TGTTATTTCAGCTCTCTCCAGGATAGTGCCAAATGGTGCAATGGGAAACCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CCA 90 bp AGCAATGAGACTGTCCCTACAACGATGATGCTTATGGTGGCCACATCTCAAAGAAGACTTAGCAAATGCTaGGTGGGGAGTAGGTTCCCA +
Preference number: 2 (lower is better)
Translates to: SNETVPTTMMLMVATSQRRLSKC*VGSRFP
Trigger: TGGGAACCTACTCCCCACCCAGCATTTGCTAAGTCT...TCTTTGAGATGTGGCCACCATAAGCATCATCGTTGTAGGGACAGTCTCATTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CCA 90 bp AACAGGTTTCCCATTGCACCATTTGGCACTATCCTGGAGAGAGCTGAAATAACATTAAAGCCACTGGGCTaGTGGCCCCCTCATGCATTT +
Preference number: 2 (lower is better)
Translates to: NRFPIAPFGTILERAEITLKPLG*WPPHAF
Trigger: AAATGCATGAGGGGGCCACCAGCCCAGTGGCTTTAA...TGTTATTTCAGCTCTCTCCAGGATAGTGCCAAATGGTGCAATGGGAAACCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CAA 90 bp GGGAGAAGGCATTGGCTCAGCCAGAATGTCTCAAAGGTACTACAATaGGCATTGAATGGACCAATTCTTTGCTGTCAGAGACTGTTCTGC +
Preference number: 2 (lower is better)
Translates to: GRRHWLSQNVSKVLQ*ALNGPILCCQRLFC
Trigger: GCAGAACAGTCTCTGACAGCAAAGAATTGGTCCATTCAATGCCAATTGTAGTACCTTTGAGACATTCTGGCTGAGCCAATGCCTTCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR TCA 90 bp TGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCACCCGGCTGGAGGTACTACAATTGGCATTaGATGGACCAATTCTTTGCT +
Preference number: 2 (lower is better)
Translates to: CHIRKISTREPRLSPGWRYYNWH*MDQFFA
Trigger: AGCAAAGAATTGGTCCATTCAATGCCAATTGTAGTA...CCTCCAGCCGGGTGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CCA 90 bp AACAGGTTTCCCATTGCACCATTTGGCACTATCCTGGAGAGAGCTGAAATAACAACAGGGAGAAGGCATTaGCTCAGCCAGAATGTCTCA +
Preference number: 2 (lower is better)
Translates to: NRFPIAPFGTILERAEITTGRRH*LSQNVS
Trigger: TGAGACATTCTGGCTGAGCCAATGCCTTCTCCCTGT...TGTTATTTCAGCTCTCTCCAGGATAGTGCCAAATGGTGCAATGGGAAACCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CAA 90 bp CACATCTCAAAGAAGCTGAGAGGGATCTCAGCCCCGTATTGTCACTaGGGAGGCAGAACCCAAATCTTAGTAAATGAAGACTTTCTCTCT +
Preference number: 2 (lower is better)
Translates to: HISKKLRGISAPYCH*GGRTQILVNEDFLS
Trigger: AGAGAGAAAGTCTTCATTTACTAAGATTTGGGTTCTGCCTCCCAAGTGACAATACGGGGCTGAGATCCCTCTCAGCTTCTTTGAGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR GCA 90 bp ATAGTAGGCGCAGTTGTGTGTCTGCTGCGTAAACTGTGCATCATGAATGAAGGGAATGGACCAATTCTTTaGTGTCAGAGACTGTTCTGC +
Preference number: 2 (lower is better)
Translates to: IVGAVVCLLRKLCIMNEGNGPIL*CQRLFC
Trigger: GCAGAACAGTCTCTGACAGCAAAGAATTGGTCCATT...CCCTTCATTCATGATGCACAGTTTACGCAGCAGACACACAACTGCGCCTACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR GCA 90 bp AAAGGACTTGGCACAGAAAGTCGATGTCAACATGAGAAAGAAAGAGGCTCTTTGGTCTTTATTTTGGCTTaGTCTGGGAGCCAAGGTCCA +
Preference number: 2 (lower is better)
Translates to: KGLGTESRCQHEKERGSLVFILA*SGSQGP
Trigger: TGGACCTTGGCTCCCAGAGCAAGCCAAAATAAAGAC...CAAAGAGCCTCTTTCTTTCTCATGTTGACATCGACTTTCTGTGCCAAGTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CCA 90 bp AGCAATGAGACTGTCCCTACAACGATGATGCTTATGGTGGCCACATCTCAAAGATATACCCAAAGGACTTaGCACAGAAAGTCGATGTCA +
Preference number: 2 (lower is better)
Translates to: SNETVPTTMMLMVATSQRYTQRT*HRKSMS
Trigger: TGACATCGACTTTCTGTGCCAAGTCCTTTGGGTATA...TCTTTGAGATGTGGCCACCATAAGCATCATCGTTGTAGGGACAGTCTCATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CAA 90 bp GAATGTCTCAAAGGTACTACAATTGGCATTGAATGGACCAATTCTTaGCTGTCAGAGACTGTTCTGCACATTGTGGGATGCCCACTAGAT +
Preference number: 2 (lower is better)
Translates to: ECLKGTTIGIEWTNS*LSETVLHIVGCPLD
Trigger: ATCTAGTGGGCATCCCACAATGTGCAGAACAGTCTCTGACAGCAAAGAATTGGTCCATTCAATGCCAATTGTAGTACCTTTGAGACATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CAA 90 bp TTTGGTGCCTATAGGAATTCCCTAGCATCCTTATACCCAAAGGACTaGGCACAGAAAGTCGATGTCAACATGAGAAAGAAAGAGGCTCTT +
Preference number: 2 (lower is better)
Translates to: FGAYRNSLASLYPKD*AQKVDVNMRKKEAL
Trigger: AAGAGCCTCTTTCTTTCTCATGTTGACATCGACTTTCTGTGCCAAGTCCTTTGGGTATAAGGATGCTAGGGAATTCCTATAGGCACCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR GCA 90 bp TGCCACAACCACTGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCAAAGCCTTATAACTTCTaGCTTAGGCAAATTCCAAAC +
Preference number: 2 (lower is better)
Translates to: CHNHCHIRKISTREPRLSKPYNF*LRQIPN
Trigger: GTTTGGAATTTGCCTAAGGCAGAAGTTATAAGGCTT...TGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCAGTGGTTGTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR TCA 72 bp TGCCCGCCTGGACCAGCACCGGGCAGACGTCTTACATaGGTGAAGTGCAGTGGGGGATGGGAAGGGCGGGGG +
Preference number: 3 (lower is better)
Translates to: CPPGPAPGRRLT*VKCSGGWEGRG
Trigger: CCCCCGCCCTTCCCATCCCCCACTGCACTTCACTCATGTAAGACGTCTGCCCGGTGCTGGTCCAGGCGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR TCA 72 bp GCTGGAGGCCTCTCGCCGATGGCTCCCAGGGACCACTaGCCTAATCAAGGGCCTCCTCCTTCACACGCCACC +
Preference number: 3 (lower is better)
Translates to: AGGLSPMAPRDH*PNQGPPPSHAT
Trigger: GGTGGCGTGTGAAGGAGGAGGCCCTTGATTAGGTCAGTGGTCCCTGGGAGCCATCGGCGAGAGGCCTCCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CCA 72 bp TGTCCTGGCCCTGCAGCACGCAGACCGTCTTGGCCCTaGCCCGACAAGCCCCCAAGGCAACAGTGTAGTCTT +
Preference number: 3 (lower is better)
Translates to: CPGPAARRPSWP*PDKPPRQQCSL
Trigger: AAGACTACACTGTTGCCTTGGGGGCTTGTCGGGCCAGGGCCAAGACGGTCTGCGTGCTGCAGGGCCAGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CCA 72 bp AAGATTAGTACCCGAGAGCCCAGACTGTCACCCGGCTaGAGGCCTCTCGCCGATGGCTCCCAGGGACCACTG +
Preference number: 3 (lower is better)
Translates to: KISTREPRLSPG*RPLADGSQGPL
Trigger: CAGTGGTCCCTGGGAGCCATCGGCGAGAGGCCTCCAGCCGGGTGACAGTCTGGGCTCTCGGGTACTAATCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR GCA 72 bp TCTCACCGGCATGTGTGGCTATTTCTGTCCTGGCCCTaGAGCACGCAGACCGTCTTGGCCCTGGCCCGACAA +
Preference number: 3 (lower is better)
Translates to: SHRHVWLFLSWP*STQTVLALARQ
Trigger: TTGTCGGGCCAGGGCCAAGACGGTCTGCGTGCTGCAGGGCCAGGACAGAAATAGCCACACATGCCGGTGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CCA 72 bp TATTTCTGTCCTGGCCCTGCAGCACGCAGACCGTCTTaGCCCTGGCCCGACAAGCCCCCAAGGCAACAGTGT +
Preference number: 3 (lower is better)
Translates to: YFCPGPAARRPS*PWPDKPPRQQC
Trigger: ACACTGTTGCCTTGGGGGCTTGTCGGGCCAGGGCCAAGACGGTCTGCGTGCTGCAGGGCCAGGACAGAAATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CCA 72 bp CTTTGTTCTCACCGGCATGTGTGGCTATTTCTGTCCTaGCCCTGCAGCACGCAGACCGTCTTGGCCCTGGCC +
Preference number: 3 (lower is better)
Translates to: LCSHRHVWLFLS*PCSTQTVLALA
Trigger: GGCCAGGGCCAAGACGGTCTGCGTGCTGCAGGGCCAGGACAGAAATAGCCACACATGCCGGTGAGAACAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR GCA 72 bp CTCAACGATGGGTGCCCATGCATGTGCCCAGAACACTaGAGACACACCATGGGGTGCCACAGCTCTGCAGAG +
Preference number: 3 (lower is better)
Translates to: LNDGCPCMCPEH*RHTMGCHSSAE
Trigger: CTCTGCAGAGCTGTGGCACCCCATGGTGTGTCTGCAGTGTTCTGGGCACATGCATGGGCACCCATCGTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CCA 72 bp ACATTTCCAATGCTGCCTGGAGGGACAACCTGCCCCTaGTTTAAAGCCACTGGGCTGGTGGCCCCCTCATGC +
Preference number: 3 (lower is better)
Translates to: TFPMLPGGTTCP*FKATGLVAPSC
Trigger: GCATGAGGGGGCCACCAGCCCAGTGGCTTTAAACCAGGGGCAGGTTGTCCCTCCAGGCAGCATTGGAAATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CAA 90 bp AGGATTAGACTCCCTATTATGGAGAATAGGTTGAGGCACAGAGCAGGAAGGGCCAGCACGCAGACCGTCTaGGCCCTGGCCCGACAAGCC +
Preference number: 3 (lower is better)
Translates to: RIRLPIMENRLRHRAGRASTQTV*ALARQA
Trigger: GGCTTGTCGGGCCAGGGCCAAGACGGTCTGCGTGCT...GGCCCTTCCTGCTCTGTGCCTCAACCTATTCTCCATAATAGGGAGTCTAATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR GCA 72 bp GTTCTTCCCAGCTGCACTCTCAACGATGGGTGCCCATaGATGTGCCCAGAACACTGCAGACACACCATGGGG +
Preference number: 3 (lower is better)
Translates to: VLPSCTLNDGCP*MCPEHCRHTMG
Trigger: CCCCATGGTGTGTCTGCAGTGTTCTGGGCACATGCATGGGCACCCATCGTTGAGAGTGCAGCTGGGAAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CCA 72 bp GAGGGACAACCTGCCCCTGGTTTAAAGCCACTGGGCTaGTGGCCCCCTCATGCATTTGTGAAACAGAAGCCC +
Preference number: 3 (lower is better)
Translates to: EGQPAPGLKPLG*WPPHAFVKQKP
Trigger: GGGCTTCTGTTTCACAAATGCATGAGGGGGCCACCAGCCCAGTGGCTTTAAACCAGGGGCAGGTTGTCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR GCA 72 bp AGTGCCTCCCCTCCAGGGAAATCCAGGAGCTGCCTTTaGCATTCCGAAGACTCTGGATTTCTCCAAGGCAGG +
Preference number: 3 (lower is better)
Translates to: SASPPGKSRSCL*HSEDSGFLQGR
Trigger: CCTGCCTTGGAGAAATCCAGAGTCTTCGGAATGGCAAAGGCAGCTCCTGGATTTCCCTGGAGGGGAGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CCA 72 bp CCTTTGGAGCAGAGGCTACAAACTCACATGCCCGCCTaGACCAGCACCGGGCAGACGTCTTACATGAGTGAA +
Preference number: 3 (lower is better)
Translates to: PLEQRLQTHMPA*TSTGQTSYMSE
Trigger: TTCACTCATGTAAGACGTCTGCCCGGTGCTGGTCCAGGCGGGCATGTGAGTTTGTAGCCTCTGCTCCAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR GCA 72 bp TTCAGAGTTCTTCCCAGCTGCACTCTCAACGATGGGTaGCCATGCATGTGCCCAGAACACTGCAGACACACC +
Preference number: 3 (lower is better)
Translates to: FRVLPSCTLNDG*PCMCPEHCRHT
Trigger: GGTGTGTCTGCAGTGTTCTGGGCACATGCATGGGCACCCATCGTTGAGAGTGCAGCTGGGAAGAACTCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CAA 90 bp TGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCACCCGGCTGGAGGGATCTCAGCCCCGTATaGTCACTTGGGAGGCAGAAC +
Preference number: 3 (lower is better)
Translates to: CHIRKISTREPRLSPGWRDLSPV*SLGRQN
Trigger: GTTCTGCCTCCCAAGTGACAATACGGGGCTGAGATC...CCTCCAGCCGGGTGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR GCA 72 bp AGCTCTGATGACTTCTGGTTCAGAGTTCTTCCCAGCTaGACTCTCAACGATGGGTGCCCATGCATGTGCCCA +
Preference number: 3 (lower is better)
Translates to: SSDDFWFRVLPS*TLNDGCPCMCP
Trigger: TGGGCACATGCATGGGCACCCATCGTTGAGAGTGCAGCTGGGAAGAACTCTGAACCAGAAGTCATCAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR GCA 72 bp TCAGCTAGTGCCTCCCCTCCAGGGAAATCCAGGAGCTaGCTTTGCCATTCCGAAGACTCTGGATTTCTCCAA +
Preference number: 3 (lower is better)
Translates to: SASASPPGKSRS*LCHSEDSGFLQ
Trigger: TTGGAGAAATCCAGAGTCTTCGGAATGGCAAAGGCAGCTCCTGGATTTCCCTGGAGGGGAGGCACTAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CCA 72 bp AGAAAGAAAGAGGCTCTTTGTTCTCACCGGCATGTGTaGCTATTTCTGTCCTGGCCCTGCAGCACGCAGACC +
Preference number: 3 (lower is better)
Translates to: RKKEALCSHRHV*LFLSWPCSTQT
Trigger: GGTCTGCGTGCTGCAGGGCCAGGACAGAAATAGCCACACATGCCGGTGAGAACAAAGAGCCTCTTTCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR TCA 72 bp ACGATGATGCTTATGGTGGCCACATCTCAAAGAAGCTaGGAGGGATCTCAGCCCCGTATTGTCACTTGGGAG +
Preference number: 3 (lower is better)
Translates to: TMMLMVATSQRS*EGSQPRIVTWE
Trigger: CTCCCAAGTGACAATACGGGGCTGAGATCCCTCTCAGCTTCTTTGAGATGTGGCCACCATAAGCATCATCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CAA 90 bp ATCCAGGAGCTGCCTTTGCCATTCCGAAGACTCTGGATTTCTCCAAGGCAGGCATTATACCCAAAGGACTaGGCACAGAAAGTCGATGTC +
Preference number: 3 (lower is better)
Translates to: IQELPLPFRRLWISPRQALYPKD*AQKVDV
Trigger: GACATCGACTTTCTGTGCCAAGTCCTTTGGGTATAA...TGCCTGCCTTGGAGAAATCCAGAGTCTTCGGAATGGCAAAGGCAGCTCCTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CAA 90 bp AGGAATAGGATTAGACTCCCTATTATGGAGAATAGGTTGAGGCACAGAGCAGGACATAGAGCCCCTCTGTaGGGTCAGACCAGAACTGGG +
Preference number: 3 (lower is better)
Translates to: RNRIRLPIMENRLRHRAGHRAPL*GQTRTG
Trigger: CCCAGTTCTGGTCTGACCCAACAGAGGGGCTCTATG...TCCTGCTCTGTGCCTCAACCTATTCTCCATAATAGGGAGTCTAATCCTATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CCA 72 bp ACATGTTCAAGGCCATGCCTCAGCTCTGATGACTTCTaGTTCAGAGTTCTTCCCAGCTGCACTCTCAACGAT +
Preference number: 3 (lower is better)
Translates to: TCSRPCLSSDDF*FRVLPSCTLND
Trigger: ATCGTTGAGAGTGCAGCTGGGAAGAACTCTGAACCAGAAGTCATCAGAGCTGAGGCATGGCCTTGAACATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CCA 72 bp TTCAGGGAGGGGACCCACCATCAAGATTGTCCTTTCTaGCACCTAACTCTTCTGTCTGCTAGAAGACAGCAA +
Preference number: 3 (lower is better)
Translates to: FREGTHHQDCPF*HLTLLSARRQQ
Trigger: TTGCTGTCTTCTAGCAGACAGAAGAGTTAGGTGCCAGAAAGGACAATCTTGATGGTGGGTCCCCTCCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CAA 90 bp AGGAATAGGATTAGACTCCCTATTATGGAGAATAGGTTGAGGCACAGAGCAGGAGACAGGGAGAAGGCATaGGCTCAGCCAGAATGTCTC +
Preference number: 3 (lower is better)
Translates to: RNRIRLPIMENRLRHRAGDREKA*AQPECL
Trigger: GAGACATTCTGGCTGAGCCAATGCCTTCTCCCTGTC...TCCTGCTCTGTGCCTCAACCTATTCTCCATAATAGGGAGTCTAATCCTATTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CAA 90 bp ACCCACCATCAAGATTGTCCTTTCTGGCACCTAACTCTTCTGTCTGCTAGAAGAAAGTTAGGCAGCACCTaGCAGGGCACCGAGCAAATA +
Preference number: 3 (lower is better)
Translates to: THHQDCPFWHLTLLSARRKLGST*QGTEQI
Trigger: TATTTGCTCGGTGCCCTGCAAGGTGCTGCCTAACTT...TCTTCTAGCAGACAGAAGAGTTAGGTGCCAGAAAGGACAATCTTGATGGTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR TCA 72 bp GAGAAACCGAGACAGAGAGACAAAATAACCTCCCTGTaGTCAGACTTAGCAAATGCTGGGTGGGGAGTAGGT +
Preference number: 3 (lower is better)
Translates to: EKPRQRDKITSL*SDLANAGWGVG
Trigger: ACCTACTCCCCACCCAGCATTTGCTAAGTCTGATCACAGGGAGGTTATTTTGTCTCTCTGTCTCGGTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR TCA 72 bp TCATGCATTTGTGAAACAGAAGCCCCAGAGACTGAGTaGCATGTTCAAGGCCATGCCTCAGCTCTGATGACT +
Preference number: 3 (lower is better)
Translates to: SCICETEAPETE*HVQGHASALMT
Trigger: AGTCATCAGAGCTGAGGCATGGCCTTGAACATGTCACTCAGTCTCTGGGGCTTCTGTTTCACAAATGCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR GCA 72 bp ATAGTAGGCGCAGTTGTGTGTCTGCTGCGTAAACTGTaGATCATGAATGAAGGGAGCTACTTCCCTCAGCTA +
Preference number: 3 (lower is better)
Translates to: IVGAVVCLLRKL*IMNEGSYFPQL
Trigger: TAGCTGAGGGAAGTAGCTCCCTTCATTCATGATGCACAGTTTACGCAGCAGACACACAACTGCGCCTACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CAA 90 bp ACCCACCATCAAGATTGTCCTTTCTGGCACCTAACTCTTCTGTCTGCTAGAAGAAGTCTTTATTTTGGCTaGCTCTGGGAGCCAAGGTCC +
Preference number: 3 (lower is better)
Translates to: THHQDCPFWHLTLLSARRSLYFG*LWEPRS
Trigger: GGACCTTGGCTCCCAGAGCAAGCCAAAATAAAGACT...TCTTCTAGCAGACAGAAGAGTTAGGTGCCAGAAAGGACAATCTTGATGGTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CAA 90 bp TGCCACAACCACTGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCAATTATGGAGAATAGGTaGAGGCACAGAGCAGGAAGG +
Preference number: 3 (lower is better)
Translates to: CHNHCHIRKISTREPRLSIMENR*RHRAGR
Trigger: CCTTCCTGCTCTGTGCCTCAACCTATTCTCCATAAT...TGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCAGTGGTTGTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR TCA 72 bp ACCCAAAGGACTTGGCACAGAAAGTCGATGTCAACATaGGAAAGAAAGAGGCTCTTTGTTCTCACCGGCATG +
Preference number: 3 (lower is better)
Translates to: TQRTWHRKSMST*ERKRLFVLTGM
Trigger: CATGCCGGTGAGAACAAAGAGCCTCTTTCTTTCTCATGTTGACATCGACTTTCTGTGCCAAGTCCTTTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR TCA 72 bp TCCCATTGCACCATTTGGCACTATCCTGGAGAGAGCTaGAATAACAAATCAAAGTTAGGCAGCACCTTGCAG +
Preference number: 3 (lower is better)
Translates to: SHCTIWHYPGES*NNKSKLGSTLQ
Trigger: CTGCAAGGTGCTGCCTAACTTTGATTTGTTATTTCAGCTCTCTCCAGGATAGTGCCAAATGGTGCAATGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR TCA 72 bp GGAATAGGATTAGACTCCCTATTATGGAGAATAGGTTaGGGCACAGAGCAGGAAGGGCCCCTTCTTAATATC +
Preference number: 3 (lower is better)
Translates to: GIGLDSLLWRIG*GTEQEGPLLNI
Trigger: GATATTAAGAAGGGGCCCTTCCTGCTCTGTGCCTCAACCTATTCTCCATAATAGGGAGTCTAATCCTATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR GCA 72 bp AAGGTACTACAATTGGCATTGAATGGACCAATTCTTTaGTGTCAGAGACTGTTCTGCACATTGTGGGATGCC +
Preference number: 3 (lower is better)
Translates to: KVLQLALNGPIL*CQRLFCTLWDA
Trigger: GGCATCCCACAATGTGCAGAACAGTCTCTGACAGCAAAGAATTGGTCCATTCAATGCCAATTGTAGTACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CCA 72 bp CCAGAATGTCTCAAAGGTACTACAATTGGCATTGAATaGACCAATTCTTTGCTGTCAGAGACTGTTCTGCAC +
Preference number: 3 (lower is better)
Translates to: PECLKGTTIGIE*TNSLLSETVLH
Trigger: GTGCAGAACAGTCTCTGACAGCAAAGAATTGGTCCATTCAATGCCAATTGTAGTACCTTTGAGACATTCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR-3UTR CAA 90 bp AGCAATGAGACTGTCCCTACAACGATGATGCTTATGGTGGCCACATCTCAAAGAGTGAATCACAATTCATaGAACTCATTCTTGGCTACA +
Preference number: 3 (lower is better)
Translates to: SNETVPTTMMLMVATSQRVNHNS*NSFLAT
Trigger: TGTAGCCAAGAATGAGTTCAATGAATTGTGATTCAC...TCTTTGAGATGTGGCCACCATAAGCATCATCGTTGTAGGGACAGTCTCATTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR GCA 72 bp AGAATTATCAATTCAAGTCAGAAGTGCCACAACCACTaGCATATTAGAAAGATTAGTACCCGAGAGCCCAGA +
Preference number: 3 (lower is better)
Translates to: RIINSSQKCHNH*HIRKISTREPR
Trigger: TCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCAGTGGTTGTGGCACTTCTGACTTGAATTGATAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR GCA 72 bp CAATACATACAAAAGGTTATGAAGCCTTATAACTTCTaGCTTAGGCAAATTCCAAACTTAAACAAAGCTCCC +
Preference number: 3 (lower is better)
Translates to: QYIQKVMKPYNF*LRQIPNLNKAP
Trigger: GGGAGCTTTGTTTAAGTTTGGAATTTGCCTAAGGCAGAAGTTATAAGGCTTCATAACCTTTTGTATGTATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp GTGGCTATTTCTGTCCTGGCCCTGCAGCACGCAGACCGTCTTGGCCCTGGCCCGGCTTCCACCAACGCCTaGAAGGGCGGCTCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VAISVLALQHADRLGPGPASTNA*KGGSAG
Trigger: CCCTGCCGAGCCGCCCTTCCAGGCGTTGGTGGAAGC...CGGGCCAGGGCCAAGACGGTCTGCGTGCTGCAGGGCCAGGACAGAAATAGCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp GTGGCTATTTCTGTCCTGGCCCTGCAGCACGCAGACCGTCTTGGCCCTGGCCCGGGCTACAAACTCACATaGCCGCCTGGACCAGCACCG +
Preference number: 4 (lower is better)
Translates to: VAISVLALQHADRLGPGPGYKLT*PPGPAP
Trigger: CGGTGCTGGTCCAGGCGGGCATGTGAGTTTGTAGCC...CGGGCCAGGGCCAAGACGGTCTGCGTGCTGCAGGGCCAGGACAGAAATAGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CAA 72 bp CTATTTCTGTCCTGGCCCTGCAGCACGCAGACCGTCTaGGCCCTGGCCCGACAAGCCCCCAAGGCAACAGTG +
Preference number: 4 (lower is better)
Translates to: LFLSWPCSTQTV*ALARQAPKATV
Trigger: CACTGTTGCCTTGGGGGCTTGTCGGGCCAGGGCCAAGACGGTCTGCGTGCTGCAGGGCCAGGACAGAAATAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp GAGACTGTTCTGCACATTGTGGGATGCCCACTAGATGCCAGGGGTGCCCCCACAGCTCCTTCCACTGGTTaGCCGGCTCCGGCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: ETVLHIVGCPLDARGAPTAPSTG*PAPAAC
Trigger: GCAAGCCGCCGGAGCCGGGCAACCAGTGGAAGGAGC...TGTGGGGGCACCCCTGGCATCTAGTGGGCATCCCACAATGTGCAGAACAGTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp GTGGCTATTTCTGTCCTGGCCCTGCAGCACGCAGACCGTCTTGGCCCTGGCCCGCTGCACTCTCAACGATaGGTGCCCATGCATGTGCCC +
Preference number: 4 (lower is better)
Translates to: VAISVLALQHADRLGPGPLHSQR*VPMHVP
Trigger: GGGCACATGCATGGGCACCCATCGTTGAGAGTGCAG...CGGGCCAGGGCCAAGACGGTCTGCGTGCTGCAGGGCCAGGACAGAAATAGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp GTGGCTATTTCTGTCCTGGCCCTGCAGCACGCAGACCGTCTTGGCCCTGGCCCGTCTCACCGGCATGTGTaGCTATTTCTGTCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: VAISVLALQHADRLGPGPSHRHV*LFLSWP
Trigger: GGGCCAGGACAGAAATAGCCACACATGCCGGTGAGA...CGGGCCAGGGCCAAGACGGTCTGCGTGCTGCAGGGCCAGGACAGAAATAGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp TGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCACCCGGCTGGAGGCGGGAACACCGCCCGTaGGAAGTCCCGCAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: CHIRKISTREPRLSPGWRREHRP*EVPQQR
Trigger: GCGCTGCTGCGGGACTTCGCACGGGCGGTGTTCCCG...CCTCCAGCCGGGTGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp CTGGAGGGACAACCTGCCCCTGGTTTAAAGCCACTGGGCTGGTGGCCCCCTCATAAGCCACTGGGCTGGTaGCCCCCTCATGCATTTGTG +
Preference number: 4 (lower is better)
Translates to: LEGQPAPGLKPLGWWPPHKPLGW*PPHAFV
Trigger: CACAAATGCATGAGGGGGCCACCAGCCCAGTGGCTT...ATGAGGGGGCCACCAGCCCAGTGGCTTTAAACCAGGGGCAGGTTGTCCCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp GTGGCTATTTCTGTCCTGGCCCTGCAGCACGCAGACCGTCTTGGCCCTGGCCCGCACACACATTTCCAATaGTGCCTGGAGGGACAACCT +
Preference number: 4 (lower is better)
Translates to: VAISVLALQHADRLGPGPHTHFQ*CLEGQP
Trigger: AGGTTGTCCCTCCAGGCAGCATTGGAAATGTGTGTG...CGGGCCAGGGCCAAGACGGTCTGCGTGCTGCAGGGCCAGGACAGAAATAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp GATTCCAGAACCTCACAGAAACAGAGAGCCCGGAGGGGCTGTGTTTGCATTGAGCAGTCCGGGGAGGCCTaGCCTCTCCCAGGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: DSRTSQKQRARRGCVCIEQSGEA*PLPGSF
Trigger: GAAGGAGCCTGGGAGAGGCCAGGCCTCCCCGGACTG...CTCAATGCAAACACAGCCCCTCCGGGCTCTCTGTTTCTGTGAGGTTCTGGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR TCA 90 bp GAGACTGTTCTGCACATTGTGGGATGCCCACTAGATGCCAGGGGTGCCCCCACAGAGCCGCAGCAGACTTaGGATGACAGCATGCCCCAT +
Preference number: 4 (lower is better)
Translates to: ETVLHIVGCPLDARGAPTEPQQT*DDSMPH
Trigger: ATGGGGCATGCTGTCATCTCAAGTCTGCTGCGGCTC...TGTGGGGGCACCCCTGGCATCTAGTGGGCATCCCACAATGTGCAGAACAGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR TCA 90 bp GTGGCTATTTCTGTCCTGGCCCTGCAGCACGCAGACCGTCTTGGCCCTGGCCCGGCTAGAAGACAGCAATaGGACTGTCCCTACAACGAT +
Preference number: 4 (lower is better)
Translates to: VAISVLALQHADRLGPGPARRQQ*DCPYND
Trigger: ATCGTTGTAGGGACAGTCTCATTGCTGTCTTCTAGC...CGGGCCAGGGCCAAGACGGTCTGCGTGCTGCAGGGCCAGGACAGAAATAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp CTGGAGGGACAACCTGCCCCTGGTTTAAAGCCACTGGGCTGGTGGCCCCCTCATATCTTGAGTCTCCGGTaGGCTCAGCAGGAGTGTGTA +
Preference number: 4 (lower is better)
Translates to: LEGQPAPGLKPLGWWPPHILSLR*AQQECV
Trigger: TACACACTCCTGCTGAGCCCACCGGAGACTCAAGAT...ATGAGGGGGCCACCAGCCCAGTGGCTTTAAACCAGGGGCAGGTTGTCCCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp CCCTGGCCCGACAAGCCCCCAAGGCAACAGTGTAGTCTTTATTTTGGCTTGCTCGGGGTGCCACAGCTCTaGAGAGCCTCAAAGCGGACA +
Preference number: 4 (lower is better)
Translates to: PWPDKPPRQQCSLYFGLLGVPQL*RASKRT
Trigger: TGTCCGCTTTGAGGCTCTGCAGAGCTGTGGCACCCC...GAGCAAGCCAAAATAAAGACTACACTGTTGCCTTGGGGGCTTGTCGGGCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp GTGGCTATTTCTGTCCTGGCCCTGCAGCACGCAGACCGTCTTGGCCCTGGCCCGACCCCAACCCCTTTATaGCTTCTTAAAGTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: VAISVLALQHADRLGPGPTPTPL*LLKVLQ
Trigger: CTGAAGGACTTTAAGAAGGCATAAAGGGGTTGGGGT...CGGGCCAGGGCCAAGACGGTCTGCGTGCTGCAGGGCCAGGACAGAAATAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp ATAATGTGTAAACCATCCTTTGGAGCAGAGGCTACAAACTCACATGCCCGCCTGCCAGGCTCCTTCCACTaGTTGCCCGGCTCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: IMCKPSFGAEATNSHARLPGSFH*LPGSGG
Trigger: GCCGCCGGAGCCGGGCAACCAGTGGAAGGAGCCTGG...CAGGCGGGCATGTGAGTTTGTAGCCTCTGCTCCAAAGGATGGTTTACACATTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp GGCTCTTTGTTCTCACCGGCATGTGTGGCTATTTCTGTCCTGGCCCTGCAGCACGGGACAACCTGCCCCTaGTTTAAAGCCACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GSLFSPACVAISVLALQHGTTCP*FKATGL
Trigger: CAGCCCAGTGGCTTTAAACCAGGGGCAGGTTGTCCC...GTGCTGCAGGGCCAGGACAGAAATAGCCACACATGCCGGTGAGAACAAAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp CTGGAGGGACAACCTGCCCCTGGTTTAAAGCCACTGGGCTGGTGGCCCCCTCATCCATTCCGAAGACTCTaGATTTCTCCAAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LEGQPAPGLKPLGWWPPHPFRRL*ISPRQA
Trigger: TGCCTGCCTTGGAGAAATCCAGAGTCTTCGGAATGG...ATGAGGGGGCCACCAGCCCAGTGGCTTTAAACCAGGGGCAGGTTGTCCCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp GTGGCTATTTCTGTCCTGGCCCTGCAGCACGCAGACCGTCTTGGCCCTGGCCCGAATGGACCAATTCTTTaGTGTCAGAGACTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: VAISVLALQHADRLGPGPNGPIL*CQRLFC
Trigger: GCAGAACAGTCTCTGACAGCAAAGAATTGGTCCATT...CGGGCCAGGGCCAAGACGGTCTGCGTGCTGCAGGGCCAGGACAGAAATAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR TCA 90 bp GATTCCAGAACCTCACAGAAACAGAGAGCCCGGAGGGGCTGTGTTTGCATTGAGGCCCCAGAGACTGAGTaGCATGTTCAAGGCCATGCC +
Preference number: 4 (lower is better)
Translates to: DSRTSQKQRARRGCVCIEAPETE*HVQGHA
Trigger: GGCATGGCCTTGAACATGTCACTCAGTCTCTGGGGC...CTCAATGCAAACACAGCCCCTCCGGGCTCTCTGTTTCTGTGAGGTTCTGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR TCA 90 bp GGCTCTTTGTTCTCACCGGCATGTGTGGCTATTTCTGTCCTGGCCCTGCAGCACCCCCTCATGCATTTGTaGAACAGAAGCCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: GSLFSPACVAISVLALQHPLMHL*NRSPRD
Trigger: GTCTCTGGGGCTTCTGTTTCACAAATGCATGAGGGG...GTGCTGCAGGGCCAGGACAGAAATAGCCACACATGCCGGTGAGAACAAAGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR TCA 90 bp TGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCACCCGGCTGGAGGGCAGCAGACTTGAGATaGCAGCATGCCCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: CHIRKISTREPRLSPGWRAADLR*QHAPSS
Trigger: GGAGGATGGGGCATGCTGTCATCTCAAGTCTGCTGC...CCTCCAGCCGGGTGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp GGCTCTTTGTTCTCACCGGCATGTGTGGCTATTTCTGTCCTGGCCCTGCAGCACAGAGTTCTTCCCAGCTaGACTCTCAACGATGGGTGC +
Preference number: 4 (lower is better)
Translates to: GSLFSPACVAISVLALQHRVLPS*TLNDGC
Trigger: GCACCCATCGTTGAGAGTGCAGCTGGGAAGAACTCT...GTGCTGCAGGGCCAGGACAGAAATAGCCACACATGCCGGTGAGAACAAAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp AGCAATGAGACTGTCCCTACAACGATGATGCTTATGGTGGCCACATCTCAAAGAGCACGCAGACCGTCTTaGCCCTGGCCCGACAAGCCC +
Preference number: 4 (lower is better)
Translates to: SNETVPTTMMLMVATSQRARRPS*PWPDKP
Trigger: GGGCTTGTCGGGCCAGGGCCAAGACGGTCTGCGTGC...TCTTTGAGATGTGGCCACCATAAGCATCATCGTTGTAGGGACAGTCTCATTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp GATTCCAGAACCTCACAGAAACAGAGAGCCCGGAGGGGCTGTGTTTGCATTGAGTGGCTATTTCTGTCCTaGCCCTGCAGCACGCAGACC +
Preference number: 4 (lower is better)
Translates to: DSRTSQKQRARRGCVCIEWLFLS*PCSTQT
Trigger: GGTCTGCGTGCTGCAGGGCCAGGACAGAAATAGCCA...CTCAATGCAAACACAGCCCCTCCGGGCTCTCTGTTTCTGTGAGGTTCTGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp TGCCACAACCACTGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCAACTCACATGCCCGCCTaGACCAGCACCGGGCAGACG +
Preference number: 4 (lower is better)
Translates to: CHNHCHIRKISTREPRLSTHMPA*TSTGQT
Trigger: CGTCTGCCCGGTGCTGGTCCAGGCGGGCATGTGAGT...TGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCAGTGGTTGTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp GAGACTGTTCTGCACATTGTGGGATGCCCACTAGATGCCAGGGGTGCCCCCACACCCCGTATTGTCACTTaGGAGGCAGAACCCAAATCT +
Preference number: 4 (lower is better)
Translates to: ETVLHIVGCPLDARGAPTPRIVT*EAEPKS
Trigger: AGATTTGGGTTCTGCCTCCCAAGTGACAATACGGGG...TGTGGGGGCACCCCTGGCATCTAGTGGGCATCCCACAATGTGCAGAACAGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp ATAATGTGTAAACCATCCTTTGGAGCAGAGGCTACAAACTCACATGCCCGCCTGAGACTGTCACCCGGCTaGAGGCCTCTCGCCGATGGC +
Preference number: 4 (lower is better)
Translates to: IMCKPSFGAEATNSHARLRLSPG*RPLADG
Trigger: GCCATCGGCGAGAGGCCTCCAGCCGGGTGACAGTCT...CAGGCGGGCATGTGAGTTTGTAGCCTCTGCTCCAAAGGATGGTTTACACATTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CAA 72 bp CCGACAAGCCCCCAAGGCAACAGTGTAGTCTTTATTTaGGCTTGCTCTGGGAGCCAAGGTCCAGGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: PTSPQGNSVVFI*ACSGSQGPGKP
Trigger: AGGCTTCCCTGGACCTTGGCTCCCAGAGCAAGCCAAAATAAAGACTACACTGTTGCCTTGGGGGCTTGTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR TCA 90 bp GGCTCTTTGTTCTCACCGGCATGTGTGGCTATTTCTGTCCTGGCCCTGCAGCACCCTGCAGGATTAAAATaGGGCCCACTGCCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: GSLFSPACVAISVLALQHPAGLK*GPLPKS
Trigger: GCTTTTTGGCAGTGGGCCTCATTTTAATCCTGCAGG...GTGCTGCAGGGCCAGGACAGAAATAGCCACACATGCCGGTGAGAACAAAGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR TCA 90 bp GATTCCAGAACCTCACAGAAACAGAGAGCCCGGAGGGGCTGTGTTTGCATTGAGGGCAGACGTCTTACATaGGTGAAGTGCAGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: DSRTSQKQRARRGCVCIEGRRLT*VKCSGG
Trigger: TCCCCCACTGCACTTCACTCATGTAAGACGTCTGCC...CTCAATGCAAACACAGCCCCTCCGGGCTCTCTGTTTCTGTGAGGTTCTGGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR TCA 90 bp GGCTCTTTGTTCTCACCGGCATGTGTGGCTATTTCTGTCCTGGCCCTGCAGCACCTGTCCCTACAACGATaGTGCTTATGGTGGCCACAT +
Preference number: 4 (lower is better)
Translates to: GSLFSPACVAISVLALQHLSLQR*CLWWPH
Trigger: ATGTGGCCACCATAAGCATCATCGTTGTAGGGACAG...GTGCTGCAGGGCCAGGACAGAAATAGCCACACATGCCGGTGAGAACAAAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp TGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCACCCGGCTGGAGGATGTGCCCAGAACACTaGAGACACACCATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: CHIRKISTREPRLSPGWRMCPEH*RHTMGC
Trigger: GCACCCCATGGTGTGTCTGCAGTGTTCTGGGCACAT...CCTCCAGCCGGGTGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp ATCCAGGAGCTGCCTTTGCCATTCCGAAGACTCTGGATTTCTCCAAGGCAGGCAACTGGCAGGCAGCCCTaGAGGATTAAAATGAGGCCC +
Preference number: 4 (lower is better)
Translates to: IQELPLPFRRLWISPRQATGRQP*RIKMRP
Trigger: GGGCCTCATTTTAATCCTGCAGGGCTGCCTGCCAGT...TGCCTGCCTTGGAGAAATCCAGAGTCTTCGGAATGGCAAAGGCAGCTCCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp GAGACTGTTCTGCACATTGTGGGATGCCCACTAGATGCCAGGGGTGCCCCCACACTCCATTGGGAAATATaGCTGTTAGTGGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ETVLHIVGCPLDARGAPTLHWEI*LLVAAP
Trigger: AGGAGCTGCCACTAACAGCCATATTTCCCAATGGAG...TGTGGGGGCACCCCTGGCATCTAGTGGGCATCCCACAATGTGCAGAACAGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp GGCTCTTTGTTCTCACCGGCATGTGTGGCTATTTCTGTCCTGGCCCTGCAGCACACAGGGAGAAGGCATTaGCTCAGCCAGAATGTCTCA +
Preference number: 4 (lower is better)
Translates to: GSLFSPACVAISVLALQHTGRRH*LSQNVS
Trigger: TGAGACATTCTGGCTGAGCCAATGCCTTCTCCCTGT...GTGCTGCAGGGCCAGGACAGAAATAGCCACACATGCCGGTGAGAACAAAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp CTGGAGGGACAACCTGCCCCTGGTTTAAAGCCACTGGGCTGGTGGCCCCCTCATCAAGATTGTCCTTTCTaGCACCTAACTCTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LEGQPAPGLKPLGWWPPHQDCPF*HLTLLS
Trigger: AGACAGAAGAGTTAGGTGCCAGAAAGGACAATCTTG...ATGAGGGGGCCACCAGCCCAGTGGCTTTAAACCAGGGGCAGGTTGTCCCTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR TCA 90 bp ATAGTAGGCGCAGTTGTGTGTCTGCTGCGTAAACTGTGCATCATGAATGAAGGGCCCCCACAGTCACTGTaGCCCCCTCAACACACACAC +
Preference number: 4 (lower is better)
Translates to: IVGAVVCLLRKLCIMNEGPPQSL*PPQHTH
Trigger: GTGTGTGTGTTGAGGGGGTCACAGTGACTGTGGGGG...CCCTTCATTCATGATGCACAGTTTACGCAGCAGACACACAACTGCGCCTACTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR TCA 90 bp CCCTGGCCCGACAAGCCCCCAAGGCAACAGTGTAGTCTTTATTTTGGCTTGCTCTTATGGAGAATAGGTTaGGGCACAGAGCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: PWPDKPPRQQCSLYFGLLLWRIG*GTEQEG
Trigger: CCCTTCCTGCTCTGTGCCTCAACCTATTCTCCATAA...GAGCAAGCCAAAATAAAGACTACACTGTTGCCTTGGGGGCTTGTCGGGCCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR TCA 90 bp TGCCACAACCACTGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCAGCTCCCAGGGACCACTaGCCTAATCAAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: CHNHCHIRKISTREPRLSAPRDH*PNQGPP
Trigger: AGGAGGCCCTTGATTAGGTCAGTGGTCCCTGGGAGC...TGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCAGTGGTTGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp TGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCACCCGGCTGGAGGAAGCCCCAAATGAGATaGCGTCCTCCTCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: CHIRKISTREPRLSPGWRKPQMR*RPPHPH
Trigger: GTGAGGATGAGGAGGACGGCATCTCATTTGGGGCTT...CCTCCAGCCGGGTGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp CTGGAGGGACAACCTGCCCCTGGTTTAAAGCCACTGGGCTGGTGGCCCCCTCATAATTCAAGTCAGAAGTaGCACAACCACTGCCATATT +
Preference number: 4 (lower is better)
Translates to: LEGQPAPGLKPLGWWPPHNSSQK*HNHCHI
Trigger: AATATGGCAGTGGTTGTGGCACTTCTGACTTGAATT...ATGAGGGGGCCACCAGCCCAGTGGCTTTAAACCAGGGGCAGGTTGTCCCTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp CCCTGGCCCGACAAGCCCCCAAGGCAACAGTGTAGTCTTTATTTTGGCTTGCTCTATTTTGGCTTGCTCTaGGAGCCAAGGTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: PWPDKPPRQQCSLYFGLLYFGLL*EPRSRE
Trigger: TTCCCTGGACCTTGGCTCCCAGAGCAAGCCAAAATA...GAGCAAGCCAAAATAAAGACTACACTGTTGCCTTGGGGGCTTGTCGGGCCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR TCA 90 bp CCCTGGCCCGACAAGCCCCCAAGGCAACAGTGTAGTCTTTATTTTGGCTTGCTCGGTGAGTTCCCTCCGTaGATAAACACATGGATTTCC +
Preference number: 4 (lower is better)
Translates to: PWPDKPPRQQCSLYFGLLGEFPP*INTWIS
Trigger: GGAAATCCATGTGTTTATTCACGGAGGGAACTCACC...GAGCAAGCCAAAATAAAGACTACACTGTTGCCTTGGGGGCTTGTCGGGCCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp AGGAATAGGATTAGACTCCCTATTATGGAGAATAGGTTGAGGCACAGAGCAGGAGGGATGCCCACTAGATaGCAGGGGTGCCCCCACAGT +
Preference number: 4 (lower is better)
Translates to: RNRIRLPIMENRLRHRAGGMPTR*QGCPHS
Trigger: ACTGTGGGGGCACCCCTGGCATCTAGTGGGCATCCC...TCCTGCTCTGTGCCTCAACCTATTCTCCATAATAGGGAGTCTAATCCTATTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp TGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCACCCGGCTGGAGGTGTCAGAGACTGTTCTaGACATTGTGGGATGCCCAC +
Preference number: 4 (lower is better)
Translates to: CHIRKISTREPRLSPGWRCQRLF*TLWDAH
Trigger: GTGGGCATCCCACAATGTGCAGAACAGTCTCTGACA...CCTCCAGCCGGGTGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp CCTAGCATCCTTATACCCAAAGGACTTGGCACAGAAAGTCGATGTCAACATGAGGTCTCCATGGAGACCTaGGGGCCAGTAAGACGGAGC +
Preference number: 4 (lower is better)
Translates to: PSILIPKGLGTESRCQHEVSMET*GPVRRS
Trigger: GCTCCGTCTTACTGGCCCCCAGGTCTCCATGGAGAC...CTCATGTTGACATCGACTTTCTGTGCCAAGTCCTTTGGGTATAAGGATGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp AGGATTAGACTCCCTATTATGGAGAATAGGTTGAGGCACAGAGCAGGAAGGGCCATTTCCAATGCTGCCTaGAGGGACAACCTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: RIRLPIMENRLRHRAGRAISNAA*RDNLPL
Trigger: CAGGGGCAGGTTGTCCCTCCAGGCAGCATTGGAAAT...GGCCCTTCCTGCTCTGTGCCTCAACCTATTCTCCATAATAGGGAGTCTAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp AAAGGACTTGGCACAGAAAGTCGATGTCAACATGAGAAAGAAAGAGGCTCTTTGAGACCGTCTTGGCCCTaGCCCGACAAGCCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: KGLGTESRCQHEKERGSLRPSWP*PDKPPR
Trigger: CCTTGGGGGCTTGTCGGGCCAGGGCCAAGACGGTCT...CAAAGAGCCTCTTTCTTTCTCATGTTGACATCGACTTTCTGTGCCAAGTCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp ACATGTTCAAGGCCATGCCTCAGCTCTGATGACTTCTGGTTCAGAGTTCTTCCCATAGAGCCCCTCTGTTaGGTCAGACCAGAACTGGGG +
Preference number: 4 (lower is better)
Translates to: TCSRPCLSSDDFWFRVLPIEPLC*VRPELG
Trigger: CCCCAGTTCTGGTCTGACCCAACAGAGGGGCTCTAT...GGGAAGAACTCTGAACCAGAAGTCATCAGAGCTGAGGCATGGCCTTGAACATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR TCA 90 bp AACAGGTTTCCCATTGCACCATTTGGCACTATCCTGGAGAGAGCTGAAATAACAGTCCAGCCTTCATCTTaGGTCTCCGGTGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: NRFPIAPFGTILERAEITVQPSS*VSGGLS
Trigger: GCTGAGCCCACCGGAGACTCAAGATGAAGGCTGGAC...TGTTATTTCAGCTCTCTCCAGGATAGTGCCAAATGGTGCAATGGGAAACCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR TCA 90 bp ATAGTAGGCGCAGTTGTGTGTCTGCTGCGTAAACTGTGCATCATGAATGAAGGGGACGTCTTACATGAGTaGAGTGCAGTGGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: IVGAVVCLLRKLCIMNEGDVLHE*SAVGDG
Trigger: CCCATCCCCCACTGCACTTCACTCATGTAAGACGTC...CCCTTCATTCATGATGCACAGTTTACGCAGCAGACACACAACTGCGCCTACTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp AGCAATGAGACTGTCCCTACAACGATGATGCTTATGGTGGCCACATCTCAAAGAGGGTGCCCATGCATGTaGCCAGAACACTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: SNETVPTTMMLMVATSQRGCPCM*PEHCRH
Trigger: GTGTCTGCAGTGTTCTGGGCACATGCATGGGCACCC...TCTTTGAGATGTGGCCACCATAAGCATCATCGTTGTAGGGACAGTCTCATTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp ACATGTTCAAGGCCATGCCTCAGCTCTGATGACTTCTGGTTCAGAGTTCTTCCCACTCTCAACGATGGGTaGCCATGCATGTGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: TCSRPCLSSDDFWFRVLPTLNDG*PCMCPE
Trigger: TTCTGGGCACATGCATGGGCACCCATCGTTGAGAGT...GGGAAGAACTCTGAACCAGAAGTCATCAGAGCTGAGGCATGGCCTTGAACATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp ATAATGTGTAAACCATCCTTTGGAGCAGAGGCTACAAACTCACATGCCCGCCTGCGGAGGGGCTGTGTTTaGATTGAGCTTGGGCTAGGA +
Preference number: 4 (lower is better)
Translates to: IMCKPSFGAEATNSHARLRRGCV*IELGLG
Trigger: TCCTAGCCCAAGCTCAATGCAAACACAGCCCCTCCG...CAGGCGGGCATGTGAGTTTGTAGCCTCTGCTCCAAAGGATGGTTTACACATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp ACTGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCACCCGGCTGGATCCCATTGCACCATTTaGCACTATCCTGGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: TAILERLVPESPDCHPAGSHCTI*HYPGES
Trigger: GCTCTCTCCAGGATAGTGCCAAATGGTGCAATGGGA...TCCAGCCGGGTGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR TCA 90 bp TGCCACAACCACTGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCATCCATCACAGGCTTTTaGCCCCCTTCCAAGGTCATC +
Preference number: 4 (lower is better)
Translates to: CHNHCHIRKISTREPRLSSITGF*PPSKVI
Trigger: GATGACCTTGGAAGGGGGTCAAAAGCCTGTGATGGA...TGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCAGTGGTTGTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR TCA 90 bp ATAATGTGTAAACCATCCTTTGGAGCAGAGGCTACAAACTCACATGCCCGCCTGAGAAGCCCCAGAGACTaGGTGACATGTTCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: IMCKPSFGAEATNSHARLRSPRD*VTCSRP
Trigger: TGGCCTTGAACATGTCACTCAGTCTCTGGGGCTTCT...CAGGCGGGCATGTGAGTTTGTAGCCTCTGCTCCAAAGGATGGTTTACACATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR TCA 90 bp ACCCACCATCAAGATTGTCCTTTCTGGCACCTAACTCTTCTGTCTGCTAGAAGAGCTTGGGCTAGGACCTaGGAGCTAGAGCAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: THHQDCPFWHLTLLSARRAWART*ELEQVL
Trigger: TAGGACTTGCTCTAGCTCTCAGGTCCTAGCCCAAGC...TCTTCTAGCAGACAGAAGAGTTAGGTGCCAGAAAGGACAATCTTGATGGTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR TCA 90 bp TGCCACAACCACTGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCACCAAAAAGCCCCAAATaGGATGCCGTCCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: CHNHCHIRKISTREPRLSPKSPK*DAVLLI
Trigger: GATGAGGAGGACGGCATCTCATTTGGGGCTTTTTGG...TGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCAGTGGTTGTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp AACAGGTTTCCCATTGCACCATTTGGCACTATCCTGGAGAGAGCTGAAATAACATTTCTGTCCTGGCCCTaGAGCACGCAGACCGTCTTG +
Preference number: 4 (lower is better)
Translates to: NRFPIAPFGTILERAEITFLSWP*STQTVL
Trigger: CAAGACGGTCTGCGTGCTGCAGGGCCAGGACAGAAA...TGTTATTTCAGCTCTCTCCAGGATAGTGCCAAATGGTGCAATGGGAAACCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp GAGACTGTTCTGCACATTGTGGGATGCCCACTAGATGCCAGGGGTGCCCCCACAAAGCCTTATAACTTCTaGCTTAGGCAAATTCCAAAC +
Preference number: 4 (lower is better)
Translates to: ETVLHIVGCPLDARGAPTKPYNF*LRQIPN
Trigger: GTTTGGAATTTGCCTAAGGCAGAAGTTATAAGGCTT...TGTGGGGGCACCCCTGGCATCTAGTGGGCATCCCACAATGTGCAGAACAGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp AGGATTAGACTCCCTATTATGGAGAATAGGTTGAGGCACAGAGCAGGAAGGGCCAGACTTAGCAAATGCTaGGTGGGGAGTAGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: RIRLPIMENRLRHRAGRARLSKC*VGSRFP
Trigger: TGGGAACCTACTCCCCACCCAGCATTTGCTAAGTCT...GGCCCTTCCTGCTCTGTGCCTCAACCTATTCTCCATAATAGGGAGTCTAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp ACATGTTCAAGGCCATGCCTCAGCTCTGATGACTTCTGGTTCAGAGTTCTTCCCAGCCATCTGTCTCAGTaGCTCAGAGAAACCGAGACA +
Preference number: 4 (lower is better)
Translates to: TCSRPCLSSDDFWFRVLPSHLSQ*LRETET
Trigger: TGTCTCGGTTTCTCTGAGCCACTGAGACAGATGGCT...GGGAAGAACTCTGAACCAGAAGTCATCAGAGCTGAGGCATGGCCTTGAACATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp AACAGGTTTCCCATTGCACCATTTGGCACTATCCTGGAGAGAGCTGAAATAACAACTGCAGACACACCATaGGGTGCCACAGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: NRFPIAPFGTILERAEITTADTP*GATALQ
Trigger: CTGCAGAGCTGTGGCACCCCATGGTGTGTCTGCAGT...TGTTATTTCAGCTCTCTCCAGGATAGTGCCAAATGGTGCAATGGGAAACCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp TGCCACAACCACTGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCACTACAAGGAAGCAGCTaGATAGATCCACTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: CHNHCHIRKISTREPRLSLQGSS*IDPLAG
Trigger: GCCTGCCAGTGGATCTATCCAGCTGCTTCCTTGTAG...TGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCAGTGGTTGTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp AGCAATGAGACTGTCCCTACAACGATGATGCTTATGGTGGCCACATCTCAAAGACTGGTGGCCCCCTCATaGATTTGTGAAACAGAAGCC +
Preference number: 4 (lower is better)
Translates to: SNETVPTTMMLMVATSQRLVAPS*ICETEA
Trigger: GGCTTCTGTTTCACAAATGCATGAGGGGGCCACCAG...TCTTTGAGATGTGGCCACCATAAGCATCATCGTTGTAGGGACAGTCTCATTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp AGCAATGAGACTGTCCCTACAACGATGATGCTTATGGTGGCCACATCTCAAAGAACACATTTCCAATGCTaGCTGGAGGGACAACCTGCC +
Preference number: 4 (lower is better)
Translates to: SNETVPTTMMLMVATSQRTHFQC*LEGQPA
Trigger: GGCAGGTTGTCCCTCCAGGCAGCATTGGAAATGTGT...TCTTTGAGATGTGGCCACCATAAGCATCATCGTTGTAGGGACAGTCTCATTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp AGCAATGAGACTGTCCCTACAACGATGATGCTTATGGTGGCCACATCTCAAAGATCCAGGAGCTGCCTTTaGCATTCCGAAGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: SNETVPTTMMLMVATSQRSRSCL*HSEDSG
Trigger: TCCAGAGTCTTCGGAATGGCAAAGGCAGCTCCTGGA...TCTTTGAGATGTGGCCACCATAAGCATCATCGTTGTAGGGACAGTCTCATTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp AAAGGACTTGGCACAGAAAGTCGATGTCAACATGAGAAAGAAAGAGGCTCTTTGCAGGCAGCAACATCCTaGTTCTTCCTCCGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: KGLGTESRCQHEKERGSLQAATS*FFLRLQ
Trigger: CTGGAGCCGGAGGAAGAACCAGGATGTTGCTGCCTG...CAAAGAGCCTCTTTCTTTCTCATGTTGACATCGACTTTCTGTGCCAAGTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp AGGATTAGACTCCCTATTATGGAGAATAGGTTGAGGCACAGAGCAGGAAGGGCCAGCTCTGATGACTTCTaGTTCAGAGTTCTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: RIRLPIMENRLRHRAGRASSDDF*FRVLPS
Trigger: GCTGGGAAGAACTCTGAACCAGAAGTCATCAGAGCT...GGCCCTTCCTGCTCTGTGCCTCAACCTATTCTCCATAATAGGGAGTCTAATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp CCTAGCATCCTTATACCCAAAGGACTTGGCACAGAAAGTCGATGTCAACATGAGTTAAAGCCACTGGGCTaGTGGCCCCCTCATGCATTT +
Preference number: 4 (lower is better)
Translates to: PSILIPKGLGTESRCQHELKPLG*WPPHAF
Trigger: AAATGCATGAGGGGGCCACCAGCCCAGTGGCTTTAA...CTCATGTTGACATCGACTTTCTGTGCCAAGTCCTTTGGGTATAAGGATGCTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp AAAGGACTTGGCACAGAAAGTCGATGTCAACATGAGAAAGAAAGAGGCTCTTTGAACGATGGGTGCCCATaGATGTGCCCAGAACACTGC +
Preference number: 4 (lower is better)
Translates to: KGLGTESRCQHEKERGSLNDGCP*MCPEHC
Trigger: GCAGTGTTCTGGGCACATGCATGGGCACCCATCGTT...CAAAGAGCCTCTTTCTTTCTCATGTTGACATCGACTTTCTGTGCCAAGTCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp CCTAGCATCCTTATACCCAAAGGACTTGGCACAGAAAGTCGATGTCAACATGAGGCGCAGTTGTGTGTCTaGTGCGTAAACTGTGCATCA +
Preference number: 4 (lower is better)
Translates to: PSILIPKGLGTESRCQHEAQLCV*CVNCAS
Trigger: TGATGCACAGTTTACGCAGCAGACACACAACTGCGC...CTCATGTTGACATCGACTTTCTGTGCCAAGTCCTTTGGGTATAAGGATGCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp AGGAATAGGATTAGACTCCCTATTATGGAGAATAGGTTGAGGCACAGAGCAGGACTTGAGATGACAGCATaGCCCATCCTCCACCCAGAA +
Preference number: 4 (lower is better)
Translates to: RNRIRLPIMENRLRHRAGLEMTA*PILHPE
Trigger: TTCTGGGTGGAGGATGGGGCATGCTGTCATCTCAAG...TCCTGCTCTGTGCCTCAACCTATTCTCCATAATAGGGAGTCTAATCCTATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp AAAGGACTTGGCACAGAAAGTCGATGTCAACATGAGAAAGAAAGAGGCTCTTTGTTAGCAAATGCTGGGTaGGGAGTAGGTTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: KGLGTESRCQHEKERGSLLANAG*GVGSQG
Trigger: CCCCTGGGAACCTACTCCCCACCCAGCATTTGCTAA...CAAAGAGCCTCTTTCTTTCTCATGTTGACATCGACTTTCTGTGCCAAGTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR TCA 90 bp TGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCACCCGGCTGGAGGACATACAAAAGGTTATaGAGCCTTATAACTTCTGCC +
Preference number: 4 (lower is better)
Translates to: CHIRKISTREPRLSPGWRTYKRL*SLITSA
Trigger: GGCAGAAGTTATAAGGCTTCATAACCTTTTGTATGT...CCTCCAGCCGGGTGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR TCA 90 bp ACTGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCACCCGGCTGGAGAAGACTTTCTCTCTTaGACCATTCACAGGAATACT +
Preference number: 4 (lower is better)
Translates to: TAILERLVPESPDCHPAGEDFLS*TIHRNT
Trigger: AGTATTCCTGTGAATGGTTCAAGAGAGAAAGTCTTC...TCCAGCCGGGTGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp AAAGGACTTGGCACAGAAAGTCGATGTCAACATGAGAAAGAAAGAGGCTCTTTGGGGAAATCCAGGAGCTaGCTTTGCCATTCCGAAGAC +
Preference number: 4 (lower is better)
Translates to: KGLGTESRCQHEKERGSLGKSRS*LCHSED
Trigger: GTCTTCGGAATGGCAAAGGCAGCTCCTGGATTTCCC...CAAAGAGCCTCTTTCTTTCTCATGTTGACATCGACTTTCTGTGCCAAGTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CAA 72 bp CATCTCAAAGAAGCTGAGAGGGATCTCAGCCCCGTATaGTCACTTGGGAGGCAGAACCCAAATCTTAGTAAA +
Preference number: 4 (lower is better)
Translates to: HLKEAERDLSPV*SLGRQNPNLSK
Trigger: TTTACTAAGATTTGGGTTCTGCCTCCCAAGTGACAATACGGGGCTGAGATCCCTCTCAGCTTCTTTGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp AGGAATAGGATTAGACTCCCTATTATGGAGAATAGGTTGAGGCACAGAGCAGGAGTCTTTATTTTGGCTTaGTCTGGGAGCCAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: RNRIRLPIMENRLRHRAGVFILA*SGSQGP
Trigger: TGGACCTTGGCTCCCAGAGCAAGCCAAAATAAAGAC...TCCTGCTCTGTGCCTCAACCTATTCTCCATAATAGGGAGTCTAATCCTATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp AGGAATAGGATTAGACTCCCTATTATGGAGAATAGGTTGAGGCACAGAGCAGGACTGCTGCGTAAACTGTaGATCATGAATGAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: RNRIRLPIMENRLRHRAGLLRKL*IMNEGS
Trigger: GCTCCCTTCATTCATGATGCACAGTTTACGCAGCAG...TCCTGCTCTGTGCCTCAACCTATTCTCCATAATAGGGAGTCTAATCCTATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CAA 72 bp GAAAGTCGATGTCAACATGAGAAAGAAAGAGGCTCTTaGTTCTCACCGGCATGTGTGGCTATTTCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: ESRCQHEKERGS*FSPACVAISVL
Trigger: CAGGACAGAAATAGCCACACATGCCGGTGAGAACAAAGAGCCTCTTTCTTTCTCATGTTGACATCGACTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR TCA 90 bp ATAATGTGTAAACCATCCTTTGGAGCAGAGGCTACAAACTCACATGCCCGCCTGAAAATAACCTCCCTGTaGTCAGACTTAGCAAATGCT +
Preference number: 4 (lower is better)
Translates to: IMCKPSFGAEATNSHARLKITSL*SDLANA
Trigger: AGCATTTGCTAAGTCTGATCACAGGGAGGTTATTTT...CAGGCGGGCATGTGAGTTTGTAGCCTCTGCTCCAAAGGATGGTTTACACATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR TCA 90 bp AACAGGTTTCCCATTGCACCATTTGGCACTATCCTGGAGAGAGCTGAAATAACAGTAAACTGTGCATCATaGATGAAGGGAGCTACTTCC +
Preference number: 4 (lower is better)
Translates to: NRFPIAPFGTILERAEITVNCAS*MKGATS
Trigger: GGAAGTAGCTCCCTTCATTCATGATGCACAGTTTAC...TGTTATTTCAGCTCTCTCCAGGATAGTGCCAAATGGTGCAATGGGAAACCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR GCA 90 bp AGGATTAGACTCCCTATTATGGAGAATAGGTTGAGGCACAGAGCAGGAAGGGCCAAGTGCCACAACCACTaGCATATTAGAAAGATTAGT +
Preference number: 4 (lower is better)
Translates to: RIRLPIMENRLRHRAGRAKCHNH*HIRKIS
Trigger: ACTAATCTTTCTAATATGGCAGTGGTTGTGGCACTT...GGCCCTTCCTGCTCTGTGCCTCAACCTATTCTCCATAATAGGGAGTCTAATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR TCA 90 bp ATAATGTGTAAACCATCCTTTGGAGCAGAGGCTACAAACTCACATGCCCGCCTGTACTACAATTGGCATTaGATGGACCAATTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: IMCKPSFGAEATNSHARLYYNWH*MDQFFA
Trigger: AGCAAAGAATTGGTCCATTCAATGCCAATTGTAGTA...CAGGCGGGCATGTGAGTTTGTAGCCTCTGCTCCAAAGGATGGTTTACACATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CCA 90 bp TGCCACAACCACTGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCAACAATTGGCATTGAATaGACCAATTCTTTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: CHNHCHIRKISTREPRLSTIGIE*TNSLLS
Trigger: TGACAGCAAAGAATTGGTCCATTCAATGCCAATTGT...TGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCAGTGGTTGTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CAA 72 bp AAAGGTACTACAATTGGCATTGAATGGACCAATTCTTaGCTGTCAGAGACTGTTCTGCACATTGTGGGATGC +
Preference number: 4 (lower is better)
Translates to: KGTTIGIEWTNS*LSETVLHIVGC
Trigger: GCATCCCACAATGTGCAGAACAGTCTCTGACAGCAAAGAATTGGTCCATTCAATGCCAATTGTAGTACCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CAA 72 bp CTCAGCCAGAATGTCTCAAAGGTACTACAATTGGCATaGAATGGACCAATTCTTTGCTGTCAGAGACTGTTC +
Preference number: 4 (lower is better)
Translates to: LSQNVSKVLQLA*NGPILCCQRLF
Trigger: GAACAGTCTCTGACAGCAAAGAATTGGTCCATTCAATGCCAATTGTAGTACCTTTGAGACATTCTGGCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CAA 72 bp CATTGGCTCAGCCAGAATGTCTCAAAGGTACTACAATaGGCATTGAATGGACCAATTCTTTGCTGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: HWLSQNVSKVLQ*ALNGPILCCQR
Trigger: TCTCTGACAGCAAAGAATTGGTCCATTCAATGCCAATTGTAGTACCTTTGAGACATTCTGGCTGAGCCAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR TCA 90 bp AGGAATAGGATTAGACTCCCTATTATGGAGAATAGGTTGAGGCACAGAGCAGGAAAGTCGATGTCAACATaGGAAAGAAAGAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: RNRIRLPIMENRLRHRAGKSMST*ERKRLF
Trigger: AAAGAGCCTCTTTCTTTCTCATGTTGACATCGACTT...TCCTGCTCTGTGCCTCAACCTATTCTCCATAATAGGGAGTCTAATCCTATTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
3UTR CAA 72 bp TATAGGAATTCCCTAGCATCCTTATACCCAAAGGACTaGGCACAGAAAGTCGATGTCAACATGAGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: YRNSLASLYPKD*AQKVDVNMRKK
Trigger: TTTCTTTCTCATGTTGACATCGACTTTCTGTGCCAAGTCCTTTGGGTATAAGGATGCTAGGGAATTCCTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS GCA 90 bp GCCGCCCGGCTTGGCCGCGCCTGGCTCCGGCGGGAACACCGCCCGTaGGAAGTCCCGCAGCAGCGCGCGGCTCTGTTCGCGCTCCCACAG +
Preference number: 5 (lower is better)
Translates to: AARLGRAWLRREHRP*EVPQQRAALFALPQ
Trigger: CTGTGGGAGCGCGAACAGAGCCGCGCGCTGCTGCGGGACTTCGCACGGGCGGTGTTCCCGCCGGAGCCAGGCGCGGCCAAGCCGGGCGGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CAA 90 bp GGCTCTTTGTTCTCACCGGCATGTGTGGCTATTTCTGTCCTGGCCCTGCAGCACAGCACGCAGACCGTCTaGGCCCTGGCCCGACAAGCC +
Preference number: 5 (lower is better)
Translates to: GSLFSPACVAISVLALQHSTQTV*ALARQA
Trigger: GGCTTGTCGGGCCAGGGCCAAGACGGTCTGCGTGCT...GTGCTGCAGGGCCAGGACAGAAATAGCCACACATGCCGGTGAGAACAAAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CAA 90 bp GATTCCAGAACCTCACAGAAACAGAGAGCCCGGAGGGGCTGTGTTTGCATTGAGGGCTCCTTCCACTGGTaGCCCGGCTCCGGCGGCTTG +
Preference number: 5 (lower is better)
Translates to: DSRTSQKQRARRGCVCIEGSFHW*PGSGGL
Trigger: CAAGCCGCCGGAGCCGGGCAACCAGTGGAAGGAGCC...CTCAATGCAAACACAGCCCCTCCGGGCTCTCTGTTTCTGTGAGGTTCTGGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS CCA 90 bp AGCCAGGGACAGCGCAAGGGTCCAGCCTTCATCTTGAGTCTCCGGTaGGCTCAGCAGGAGTGTGTACGACTCCATCACAGGCTTTTGACC +
Preference number: 5 (lower is better)
Translates to: SQGQRKGPAFILSLR*AQQECVRLHHRLLT
Trigger: GGTCAAAAGCCTGTGATGGAGTCGTACACACTCCTGCTGAGCCCACCGGAGACTCAAGATGAAGGCTGGACCCTTGCGCTGTCCCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373640.5
ENST00000463834.1
ENST00000477463.1
CDS TCA 90 bp TCCGGTGGGCTCAGCAGGAGTGTGTACGACTCCATCACAGGCTTTTaGCCCCCTTCCAAGGTCATCACAGTCTCCATTGGGAAATATGGC +
Preference number: 5 (lower is better)
Translates to: SGGLSRSVYDSITGF*PPSKVITVSIGKYG
Trigger: GCCATATTTCCCAATGGAGACTGTGATGACCTTGGAAGGGGGTCAAAAGCCTGTGATGGAGTCGTACACACTCCTGCTGAGCCCACCGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373640.5
ENST00000463834.1
ENST00000477463.1
CDS-3UTR CAA 90 bp GATTCCAGAACCTCACAGAAACAGAGAGCCCGGAGGGGCTGTGTTTGCATTGAGGATCTCAGCCCCGTATaGTCACTTGGGAGGCAGAAC +
Preference number: 5 (lower is better)
Translates to: DSRTSQKQRARRGCVCIEDLSPV*SLGRQN
Trigger: GTTCTGCCTCCCAAGTGACAATACGGGGCTGAGATC...CTCAATGCAAACACAGCCCCTCCGGGCTCTCTGTTTCTGTGAGGTTCTGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CAA 90 bp ACTGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCACCCGGCTGGAGACAGGGAGAAGGCATaGGCTCAGCCAGAATGTCTC +
Preference number: 5 (lower is better)
Translates to: TAILERLVPESPDCHPAGDREKA*AQPECL
Trigger: GAGACATTCTGGCTGAGCCAATGCCTTCTCCCTGTC...TCCAGCCGGGTGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CAA 90 bp GGCTCTTTGTTCTCACCGGCATGTGTGGCTATTTCTGTCCTGGCCCTGCAGCACAAAGAAAGAGGCTCTTaGTTCTCACCGGCATGTGTG +
Preference number: 5 (lower is better)
Translates to: GSLFSPACVAISVLALQHKERGS*FSPACV
Trigger: CACACATGCCGGTGAGAACAAAGAGCCTCTTTCTTT...GTGCTGCAGGGCCAGGACAGAAATAGCCACACATGCCGGTGAGAACAAAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CAA 90 bp CCCTGGCCCGACAAGCCCCCAAGGCAACAGTGTAGTCTTTATTTTGGCTTGCTCTTCCCATTGCACCATTaGGCACTATCCTGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: PWPDKPPRQQCSLYFGLLFPLHH*ALSWRE
Trigger: CTCTCTCCAGGATAGTGCCAAATGGTGCAATGGGAA...GAGCAAGCCAAAATAAAGACTACACTGTTGCCTTGGGGGCTTGTCGGGCCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS CCA 90 bp CATCACAGGCTTTTGACCCCCTTCCAAGGTCATCACAGTCTCCATTaGGAAATATGGCTGTTAGTGGCAGCTCCTCCTCAGGTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: HHRLLTPFQGHHSLH*EIWLLVAAPPQVPG
Trigger: TCCAGGAACCTGAGGAGGAGCTGCCACTAACAGCCATATTTCCCAATGGAGACTGTGATGACCTTGGAAGGGGGTCAAAAGCCTGTGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373640.5
ENST00000463834.1
ENST00000477463.1
CDS-3UTR CAA 90 bp CCTAGCATCCTTATACCCAAAGGACTTGGCACAGAAAGTCGATGTCAACATGAGGGTCCAGCCTTCATCTaGAGTCTCCGGTGGGCTCAG +
Preference number: 5 (lower is better)
Translates to: PSILIPKGLGTESRCQHEGPAFI*SLRWAQ
Trigger: CTGAGCCCACCGGAGACTCAAGATGAAGGCTGGACC...CTCATGTTGACATCGACTTTCTGTGCCAAGTCCTTTGGGTATAAGGATGCTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CAA 90 bp GATTCCAGAACCTCACAGAAACAGAGAGCCCGGAGGGGCTGTGTTTGCATTGAGAGTCTTTATTTTGGCTaGCTCTGGGAGCCAAGGTCC +
Preference number: 5 (lower is better)
Translates to: DSRTSQKQRARRGCVCIESLYFG*LWEPRS
Trigger: GGACCTTGGCTCCCAGAGCAAGCCAAAATAAAGACT...CTCAATGCAAACACAGCCCCTCCGGGCTCTCTGTTTCTGTGAGGTTCTGGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CAA 90 bp GGCTCTTTGTTCTCACCGGCATGTGTGGCTATTTCTGTCCTGGCCCTGCAGCACAGTGTAGTCTTTATTTaGGCTTGCTCTGGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: GSLFSPACVAISVLALQHSVVFI*ACSGSQ
Trigger: TTGGCTCCCAGAGCAAGCCAAAATAAAGACTACACT...GTGCTGCAGGGCCAGGACAGAAATAGCCACACATGCCGGTGAGAACAAAGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS CCA 90 bp CTTTTGACCCCCTTCCAAGGTCATCACAGTCTCCATTGGGAAATATaGCTGTTAGTGGCAGCTCCTCCTCAGGTTCCTGGAAGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: LLTPFQGHHSLHWEI*LLVAAPPQVPGSLP
Trigger: AGGAAGACTTCCAGGAACCTGAGGAGGAGCTGCCACTAACAGCCATATTTCCCAATGGAGACTGTGATGACCTTGGAAGGGGGTCAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373640.5
ENST00000463834.1
ENST00000477463.1
CDS-3UTR CAA 90 bp ACATGTTCAAGGCCATGCCTCAGCTCTGATGACTTCTGGTTCAGAGTTCTTCCCCTCCATCACAGGCTTTaGACCCCCTTCCAAGGTCAT +
Preference number: 5 (lower is better)
Translates to: TCSRPCLSSDDFWFRVLPLHHRL*TPFQGH
Trigger: ATGACCTTGGAAGGGGGTCAAAAGCCTGTGATGGAG...GGGAAGAACTCTGAACCAGAAGTCATCAGAGCTGAGGCATGGCCTTGAACATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CAA 90 bp ACCCACCATCAAGATTGTCCTTTCTGGCACCTAACTCTTCTGTCTGCTAGAAGACATAGAGCCCCTCTGTaGGGTCAGACCAGAACTGGG +
Preference number: 5 (lower is better)
Translates to: THHQDCPFWHLTLLSARRHRAPL*GQTRTG
Trigger: CCCAGTTCTGGTCTGACCCAACAGAGGGGCTCTATG...TCTTCTAGCAGACAGAAGAGTTAGGTGCCAGAAAGGACAATCTTGATGGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CAA 90 bp ATAGTAGGCGCAGTTGTGTGTCTGCTGCGTAAACTGTGCATCATGAATGAAGGGGCCCCGTATTGTCACTaGGGAGGCAGAACCCAAATC +
Preference number: 5 (lower is better)
Translates to: IVGAVVCLLRKLCIMNEGAPYCH*GGRTQI
Trigger: GATTTGGGTTCTGCCTCCCAAGTGACAATACGGGGC...CCCTTCATTCATGATGCACAGTTTACGCAGCAGACACACAACTGCGCCTACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CAA 90 bp ACCCACCATCAAGATTGTCCTTTCTGGCACCTAACTCTTCTGTCTGCTAGAAGAATCCAGGAGCTGCCTTaGCCATTCCGAAGACTCTGG +
Preference number: 5 (lower is better)
Translates to: THHQDCPFWHLTLLSARRIQELP*PFRRLW
Trigger: CCAGAGTCTTCGGAATGGCAAAGGCAGCTCCTGGAT...TCTTCTAGCAGACAGAAGAGTTAGGTGCCAGAAAGGACAATCTTGATGGTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CAA 90 bp ATCCAGGAGCTGCCTTTGCCATTCCGAAGACTCTGGATTTCTCCAAGGCAGGCATCATCACAGTCTCCATaGGGAAATATGGCTGTTAGT +
Preference number: 5 (lower is better)
Translates to: IQELPLPFRRLWISPRQASSQSP*GNMAVS
Trigger: ACTAACAGCCATATTTCCCAATGGAGACTGTGATGA...TGCCTGCCTTGGAGAAATCCAGAGTCTTCGGAATGGCAAAGGCAGCTCCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS TCA 90 bp ACAAAACCTGAGTCAGAGGGTCACATGGTTCCCACTTCACAAGACTaGGAGATTTCGTTTAGCAAATCAAGTGCCCCAACGGTCAACTGC +
Preference number: 5 (lower is better)
Translates to: TKPESEGHMVPTSQD*EISFSKSSAPTVNC
Trigger: GCAGTTGACCGTTGGGGCACTTGATTTGCTAAACGAAATCTCTCAGTCTTGTGAAGTGGGAACCATGTGACCCTCTGACTCAGGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463834.1
CDS-3UTR CAA 90 bp AGGATTAGACTCCCTATTATGGAGAATAGGTTGAGGCACAGAGCAGGAAGGGCCTTATACCCAAAGGACTaGGCACAGAAAGTCGATGTC +
Preference number: 5 (lower is better)
Translates to: RIRLPIMENRLRHRAGRALYPKD*AQKVDV
Trigger: GACATCGACTTTCTGTGCCAAGTCCTTTGGGTATAA...GGCCCTTCCTGCTCTGTGCCTCAACCTATTCTCCATAATAGGGAGTCTAATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CAA 90 bp AACAGGTTTCCCATTGCACCATTTGGCACTATCCTGGAGAGAGCTGAAATAACAAAGTTAGGCAGCACCTaGCAGGGCACCGAGCAAATA +
Preference number: 5 (lower is better)
Translates to: NRFPIAPFGTILERAEITKLGST*QGTEQI
Trigger: TATTTGCTCGGTGCCCTGCAAGGTGCTGCCTAACTT...TGTTATTTCAGCTCTCTCCAGGATAGTGCCAAATGGTGCAATGGGAAACCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CAA 90 bp ACCCACCATCAAGATTGTCCTTTCTGGCACCTAACTCTTCTGTCTGCTAGAAGAATTATGGAGAATAGGTaGAGGCACAGAGCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: THHQDCPFWHLTLLSARRIMENR*RHRAGR
Trigger: CCTTCCTGCTCTGTGCCTCAACCTATTCTCCATAAT...TCTTCTAGCAGACAGAAGAGTTAGGTGCCAGAAAGGACAATCTTGATGGTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CAA 90 bp TGCCATATTAGAAAGATTAGTACCCGAGAGCCCAGACTGTCACCCGGCTGGAGGGTGAATCACAATTCATaGAACTCATTCTTGGCTACA +
Preference number: 5 (lower is better)
Translates to: CHIRKISTREPRLSPGWRVNHNS*NSFLAT
Trigger: TGTAGCCAAGAATGAGTTCAATGAATTGTGATTCAC...CCTCCAGCCGGGTGACAGTCTGGGCTCTCGGGTACTAATCTTTCTAATATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CAA 90 bp ACCCACCATCAAGATTGTCCTTTCTGGCACCTAACTCTTCTGTCTGCTAGAAGATGTGTAAACCATCCTTaGGAGCAGAGGCTACAAACT +
Preference number: 5 (lower is better)
Translates to: THHQDCPFWHLTLLSARRCVNHP*EQRLQT
Trigger: AGTTTGTAGCCTCTGCTCCAAAGGATGGTTTACACA...TCTTCTAGCAGACAGAAGAGTTAGGTGCCAGAAAGGACAATCTTGATGGTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS-3UTR CAA 90 bp AAAGGACTTGGCACAGAAAGTCGATGTCAACATGAGAAAGAAAGAGGCTCTTTGGACCCACCATCAAGATaGTCCTTTCTGGCACCTAAC +
Preference number: 5 (lower is better)
Translates to: KGLGTESRCQHEKERGSLDPPSR*SFLAPN
Trigger: GTTAGGTGCCAGAAAGGACAATCTTGATGGTGGGTC...CAAAGAGCCTCTTTCTTTCTCATGTTGACATCGACTTTCTGTGCCAAGTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS GCA 72 bp CTTGGCCGCGCCTGGCTCCGGCGGGAACACCGCCCGTaGGAAGTCCCGCAGCAGCGCGCGGCTCTGTTCGCG +
Preference number: 6 (lower is better)
Translates to: LGRAWLRREHRP*EVPQQRAALFA
Trigger: CGCGAACAGAGCCGCGCGCTGCTGCGGGACTTCGCACGGGCGGTGTTCCCGCCGGAGCCAGGCGCGGCCAAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373640.5
CDS CCA 72 bp CAGCGCAAGGGTCCAGCCTTCATCTTGAGTCTCCGGTaGGCTCAGCAGGAGTGTGTACGACTCCATCACAGG +
Preference number: 6 (lower is better)
Translates to: QRKGPAFILSLR*AQQECVRLHHR
Trigger: CCTGTGATGGAGTCGTACACACTCCTGCTGAGCCCACCGGAGACTCAAGATGAAGGCTGGACCCTTGCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373640.5
ENST00000463834.1
ENST00000477463.1
CDS CAA 90 bp CTCCGGTGGGCTCAGCAGGAGTGTGTACGACTCCATCACAGGCTTTaGACCCCCTTCCAAGGTCATCACAGTCTCCATTGGGAAATATGG +
Preference number: 6 (lower is better)
Translates to: LRWAQQECVRLHHRL*TPFQGHHSLHWEIW
Trigger: CCATATTTCCCAATGGAGACTGTGATGACCTTGGAAGGGGGTCAAAAGCCTGTGATGGAGTCGTACACACTCCTGCTGAGCCCACCGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373640.5
ENST00000463834.1
ENST00000477463.1
CDS TCA 72 bp CTCAGCAGGAGTGTGTACGACTCCATCACAGGCTTTTaGCCCCCTTCCAAGGTCATCACAGTCTCCATTGGG +
Preference number: 6 (lower is better)
Translates to: LSRSVYDSITGF*PPSKVITVSIG
Trigger: CCCAATGGAGACTGTGATGACCTTGGAAGGGGGTCAAAAGCCTGTGATGGAGTCGTACACACTCCTGCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373640.5
ENST00000463834.1
ENST00000477463.1
CDS CAA 72 bp GCTCAGCAGGAGTGTGTACGACTCCATCACAGGCTTTaGACCCCCTTCCAAGGTCATCACAGTCTCCATTGG +
Preference number: 6 (lower is better)
Translates to: AQQECVRLHHRL*TPFQGHHSLHW
Trigger: CCAATGGAGACTGTGATGACCTTGGAAGGGGGTCAAAAGCCTGTGATGGAGTCGTACACACTCCTGCTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373640.5
ENST00000463834.1
ENST00000477463.1
CDS CAA 90 bp CCATCACAGGCTTTTGACCCCCTTCCAAGGTCATCACAGTCTCCATaGGGAAATATGGCTGTTAGTGGCAGCTCCTCCTCAGGTTCCTGG +
Preference number: 6 (lower is better)
Translates to: PSQAFDPLPRSSQSP*GNMAVSGSSSSGSW
Trigger: CCAGGAACCTGAGGAGGAGCTGCCACTAACAGCCATATTTCCCAATGGAGACTGTGATGACCTTGGAAGGGGGTCAAAAGCCTGTGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373640.5
ENST00000463834.1
ENST00000477463.1
CDS CCA 72 bp CCCTTCCAAGGTCATCACAGTCTCCATTGGGAAATATaGCTGTTAGTGGCAGCTCCTCCTCAGGTTCCTGGA +
Preference number: 6 (lower is better)
Translates to: PFQGHHSLHWEI*LLVAAPPQVPG
Trigger: TCCAGGAACCTGAGGAGGAGCTGCCACTAACAGCCATATTTCCCAATGGAGACTGTGATGACCTTGGAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373640.5
ENST00000463834.1
ENST00000477463.1
CDS GCA 72 bp ATTTCGTTTAGCAAATCAAGTGCCCCAACGGTCAACTaGCCTAGTTTCAACTGTCTGATTAAAAACACAGAG +
Preference number: 6 (lower is better)
Translates to: ISFSKSSAPTVN*PSFNCLIKNTE
Trigger: CTCTGTGTTTTTAATCAGACAGTTGAAACTAGGGCAGTTGACCGTTGGGGCACTTGATTTGCTAAACGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463834.1