Pregenerated sensors for C2ORF49-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000272994Ensembl transcript IDs: ENST00000610036.1
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CAGAATTCTTTCCCTCGAGGTTGCCCCAGGAATCCCTTTGACCTCTaGCATTGGACGTCACAGAAGGCGCGACTAATCGTGGCTGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: QNSFPRGCPRNPFDL*HWTSQKARLIVAGS Trigger: GGAGCCAGCCACGATTAGTCGCGCCTTCTGTGACGTCCAATGGCAGAGGTCAAAGGGATTCCTGGGGCAACCTCGAGGGAAAGAATTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610036.1 |
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| CDS TCA 90 bp | CTCCAGGGCTTTGTCAAGATTGGGGAGACTTCTGAAGTGCCAAGATaGGAAGAGAGAGACCTTAGGTCCTTGTGTCACTGGTCCCCACAC | + |
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Preference number: 5 (lower is better) Translates to: LQGFVKIGETSEVPR*EERDLRSLCHWSPH Trigger: GTGTGGGGACCAGTGACACAAGGACCTAAGGTCTCTCTCTTCTCATCTTGGCACTTCAGAAGTCTCCCCAATCTTGACAAAGCCCTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610036.1 |
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| CDS GCA 90 bp | GGCCCTTTCTCCAGGGCTTTGTCAAGATTGGGGAGACTTCTGAAGTaGCAAGATGAGAAGAGAGAGACCTTAGGTCCTTGTGTCACTGGT | + |
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Preference number: 5 (lower is better) Translates to: GPFSRALSRLGRLLK*QDEKRETLGPCVTG Trigger: ACCAGTGACACAAGGACCTAAGGTCTCTCTCTTCTCATCTTGGCACTTCAGAAGTCTCCCCAATCTTGACAAAGCCCTGGAGAAAGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610036.1 |
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| CDS TCA 90 bp | AAAATGTACGGACCCTGTCCCAGAGGAACTCACAATCTAGTGAGGTaGCAATGCCAGGCATTGCAGTGTTTGTTGGTTCCCCACAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: KMYGPCPRGTHNLVR*QCQALQCLLVPHSF Trigger: AAAGCTGTGGGGAACCAACAAACACTGCAATGCCTGGCATTGTCACCTCACTAGATTGTGAGTTCCTCTGGGACAGGGTCCGTACATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610036.1 |
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| CDS GCA 90 bp | CAATTCCCATGTGGTATGGCAGAATTCTCTGTGAGGCAGCCCTTCTaGCTGGACATACTTGAAGCATCACCTCAGAACTTGTTAGAAATG | + |
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Preference number: 5 (lower is better) Translates to: QFPCGMAEFSVRQPF*LDILEASPQNLLEM Trigger: CATTTCTAACAAGTTCTGAGGTGATGCTTCAAGTATGTCCAGGCAGAAGGGCTGCCTCACAGAGAATTCTGCCATACCACATGGGAATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610036.1 |
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| CDS CCA 90 bp | AGGCATTTTACACACTTGAGCTCCAATCCTCACAACACTGTGAGATaGCTTATAATTTCCATCTCAGAAGGGAGGAAGCTACAGCTAAAG | + |
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Preference number: 5 (lower is better) Translates to: RHFTHLSSNPHNTVR*LIISISEGRKLQLK Trigger: CTTTAGCTGTAGCTTCCTCCCTTCTGAGATGGAAATTATAAGCCATCTCACAGTGTTGTGAGGATTGGAGCTCAAGTGTGTAAAATGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610036.1 |
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| CDS GCA 90 bp | TTTTCTGTAACTGAAATGTATTTCTATTTGAAGCCTCCATTTACCTaGAGTGACAATAATCTTATCAACAGGAGGCCCTCCTCCTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: FSVTEMYFYLKPPFT*SDNNLINRRPSSFL Trigger: AAGAAAGGAGGAGGGCCTCCTGTTGATAAGATTATTGTCACTGCAGGTAAATGGAGGCTTCAAATAGAAATACATTTCAGTTACAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610036.1 |
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| CDS CCA 72 bp | CCATTGGACGTCACAGAAGGCGCGACTAATCGTGGCTaGCTCCCGGAGCTTCACTCTTCCCTCTCTTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: PLDVTEGATNRG*LPELHSSLSSC Trigger: GCAGGAAGAGAGGGAAGAGTGAAGCTCCGGGAGCCAGCCACGATTAGTCGCGCCTTCTGTGACGTCCAATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610036.1 |
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| CDS GCA 72 bp | TTCCCTCGAGGTTGCCCCAGGAATCCCTTTGACCTCTaGCATTGGACGTCACAGAAGGCGCGACTAATCGTG | + |
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Preference number: 6 (lower is better) Translates to: FPRGCPRNPFDL*HWTSQKARLIV Trigger: CACGATTAGTCGCGCCTTCTGTGACGTCCAATGGCAGAGGTCAAAGGGATTCCTGGGGCAACCTCGAGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610036.1 |
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| CDS GCA 72 bp | AAGTGCAGTGTGGTAATCCTAACTGCAGGCTGGAATTaGTGGGCGCCAGTGATCCTACCACCTCAGCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: KCSVVILTAGWN*WAPVILPPQPP Trigger: GGGAGGCTGAGGTGGTAGGATCACTGGCGCCCAGCAATTCCAGCCTGCAGTTAGGATTACCACACTGCACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610036.1 |
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| CDS CAA 72 bp | GAAGTGCAGTGTGGTAATCCTAACTGCAGGCTGGAATaGCTGGGCGCCAGTGATCCTACCACCTCAGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: EVQCGNPNCRLE*LGASDPTTSAS Trigger: GGAGGCTGAGGTGGTAGGATCACTGGCGCCCAGCAATTCCAGCCTGCAGTTAGGATTACCACACTGCACTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610036.1 |
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| CDS CAA 72 bp | CTTATCAACGGGAGGCCCGGCCCTTTCTCCAGGGCTTaGTCAAGATTGGGGAGACTTCTGAAGTGCCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: LINGRPGPFSRA*SRLGRLLKCQD Trigger: ATCTTGGCACTTCAGAAGTCTCCCCAATCTTGACAAAGCCCTGGAGAAAGGGCCGGGCCTCCCGTTGATAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610036.1 |
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| CDS CAA 90 bp | CTTATCAACGGGAGGCCCGGCCCTTTCTCCAGGGCTTTGTCAAGATaGGGGAGACTTCTGAAGTGCCAAGATGAGAAGAGAGAGACCTTA | + |
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Preference number: 6 (lower is better) Translates to: LINGRPGPFSRALSR*GRLLKCQDEKRETL Trigger: TAAGGTCTCTCTCTTCTCATCTTGGCACTTCAGAAGTCTCCCCAATCTTGACAAAGCCCTGGAGAAAGGGCCGGGCCTCCCGTTGATAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610036.1 |
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| CDS CAA 72 bp | TCCAAGGAGAGCCCACAGAGGAGGCATTTTACACACTaGAGCTCCAATCCTCACAACACTGTGAGATGGCTT | + |
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Preference number: 6 (lower is better) Translates to: SKESPQRRHFTH*SSNPHNTVRWL Trigger: AAGCCATCTCACAGTGTTGTGAGGATTGGAGCTCAAGTGTGTAAAATGCCTCCTCTGTGGGCTCTCCTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610036.1 |
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| CDS TCA 72 bp | GACTTCAATTCCCATGTGGTATGGCAGAATTCTCTGTaGGGCAGCCCTTCTGCCTGGACATACTTGAAGCAT | + |
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Preference number: 6 (lower is better) Translates to: DFNSHVVWQNSL*GSPSAWTYLKH Trigger: ATGCTTCAAGTATGTCCAGGCAGAAGGGCTGCCTCACAGAGAATTCTGCCATACCACATGGGAATTGAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610036.1 |
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| CDS CCA 72 bp | CAGTCCCTGGCACACTGTAAATGTCTAACAAACGTTTaGCGGCTATTACTGGCGTTTCCCAGCCCGTTATTA | + |
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Preference number: 6 (lower is better) Translates to: QSLAHCKCLTNV*RLLLAFPSPLL Trigger: TAATAACGGGCTGGGAAACGCCAGTAATAGCCGCCAAACGTTTGTTAGACATTTACAGTGTGCCAGGGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610036.1 |
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| CDS TCA 72 bp | ATTCTCTGTGAGGCAGCCCTTCTGCCTGGACATACTTaGAGCATCACCTCAGAACTTGTTAGAAATGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: ILCEAALLPGHT*SITSELVRNAN Trigger: ATTTGCATTTCTAACAAGTTCTGAGGTGATGCTTCAAGTATGTCCAGGCAGAAGGGCTGCCTCACAGAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610036.1 |
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| CDS CAA 72 bp | ACTGTAGTGTTGGTTTTCAGTCTTTTGGTTTCAGGCTaGAGGGTTAGAGATGTCTGTGACTTCAATTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: TVVLVFSLLVSG*RVRDVCDFNSH Trigger: ATGGGAATTGAAGTCACAGACATCTCTAACCCTCAAGCCTGAAACCAAAAGACTGAAAACCAACACTACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610036.1 |
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| CDS CAA 72 bp | ACACAAGTTCAGAGATGTTCTTTGTCCACTGTAGTGTaGGTTTTCAGTCTTTTGGTTTCAGGCTTGAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: TQVQRCSLSTVV*VFSLLVSGLRV Trigger: AACCCTCAAGCCTGAAACCAAAAGACTGAAAACCAACACTACAGTGGACAAAGAACATCTCTGAACTTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610036.1 |
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