Pregenerated sensors for C2ORF27A (Homo sapiens)
Ensembl gene IDs: ENSG00000287151Ensembl transcript IDs: ENST00000652878.1, ENST00000653458.1, ENST00000655714.1, ENST00000657415.1, ENST00000666411.1
Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS TCA 90 bp | AATTTATGTGGAAATGTGAAACACCCTGAATTTCCAAAGCTATTCTaGGAAATACAAACCATACGGGATGCATCACATTCCCTGAGTTCT | + |
Preference number: 5 (lower is better) Translates to: NLCGNVKHPEFPKLF*EIQTIRDASHSLSS Trigger: AGAACTCAGGGAATGTGATGCATCCCGTATGGTTTGTATTTCTCAGAATAGCTTTGGAAATTCAGGGTGTTTCACATTTCCACATAAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655714.1 |
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CDS GCA 72 bp | TCCTGCCATCTGCAGCCACATGAAGAAATCAGAGGCTaGTGGGGAAGTGGAGGCAGTCTCGGAAGGAATCAG | + |
Preference number: 6 (lower is better) Translates to: SCHLQPHEEIRG*WGSGGSLGRNQ Trigger: CTGATTCCTTCCGAGACTGCCTCCACTTCCCCAGCAGCCTCTGATTTCTTCATGTGGCTGCAGATGGCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000652878.1 ENST00000653458.1 ENST00000655714.1 ENST00000657415.1 ENST00000666411.1 |
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CDS GCA 72 bp | TGTTGCAGCCATAAACCTTTGGGAAATCCTGCCATCTaGAGCCACATGAAGAAATCAGAGGCTGCTGGGGAA | + |
Preference number: 6 (lower is better) Translates to: CCSHKPLGNPAI*SHMKKSEAAGE Trigger: TTCCCCAGCAGCCTCTGATTTCTTCATGTGGCTGCAGATGGCAGGATTTCCCAAAGGTTTATGGCTGCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000652878.1 ENST00000653458.1 ENST00000655714.1 ENST00000657415.1 ENST00000666411.1 |
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CDS TCA 72 bp | TGCTGGGGAAGTGGAGGCAGTCTCGGAAGGAATCAGTaGTGGGTACAAAGTTACTCTCAGATGATAGTGATC | + |
Preference number: 6 (lower is better) Translates to: CWGSGGSLGRNQ*WVQSYSQMIVI Trigger: GATCACTATCATCTGAGAGTAACTTTGTACCCATCACTGATTCCTTCCGAGACTGCCTCCACTTCCCCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000652878.1 ENST00000653458.1 ENST00000655714.1 ENST00000657415.1 ENST00000666411.1 |
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CDS TCA 72 bp | AAAATAATGAAACAGTCCCATTTAGAGCAACGCAGATaGACCACCGCTCAGAAGCTCGCTCTGACCACGCTG | + |
Preference number: 6 (lower is better) Translates to: KIMKQSHLEQRR*TTAQKLALTTL Trigger: CAGCGTGGTCAGAGCGAGCTTCTGAGCGGTGGTTCATCTGCGTTGCTCTAAATGGGACTGTTTCATTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657415.1 ENST00000666411.1 |
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CDS CAA 90 bp | CAGCCAGAAAATCAGAATGAAATTTCATCATTTGGAGCCATACTGTaGAACCTGGAGGACCGCATGGTAAATGACCTGTTCAAACACAGC | + |
Preference number: 6 (lower is better) Translates to: QPENQNEISSFGAIL*NLEDRMVNDLFKHS Trigger: GCTGTGTTTGAACAGGTCATTTACCATGCGGTCCTCCAGGTTCAACAGTATGGCTCCAAATGATGAAATTTCATTCTGATTTTCTGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000652878.1 ENST00000653458.1 ENST00000655714.1 ENST00000657415.1 ENST00000666411.1 |
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CDS TCA 72 bp | TTCAAATTCTCTGCCAACCAACTGCCCATCCACAGATaGAGGGATAAAGTAACTGTGGTGGACATACACAAA | + |
Preference number: 6 (lower is better) Translates to: FKFSANQLPIHR*RDKVTVVDIHK Trigger: TTTGTGTATGTCCACCACAGTTACTTTATCCCTTCATCTGTGGATGGGCAGTTGGTTGGCAGAGAATTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000652878.1 ENST00000657415.1 |
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CDS TCA 72 bp | GGAAATGTGAAACACCCTGAATTTCCAAAGCTATTCTaGGAAATACAAACCATACGGGATGCATCACATTCC | + |
Preference number: 6 (lower is better) Translates to: GNVKHPEFPKLF*EIQTIRDASHS Trigger: GGAATGTGATGCATCCCGTATGGTTTGTATTTCTCAGAATAGCTTTGGAAATTCAGGGTGTTTCACATTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655714.1 |
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CDS TCA 72 bp | CATTTCCATATATGTTTCATTCTGCCCATCCACAGATaGAGGGATAAAGTAACTGTGGTGGACATACACAAA | + |
Preference number: 6 (lower is better) Translates to: HFHICFILPIHR*RDKVTVVDIHK Trigger: TTTGTGTATGTCCACCACAGTTACTTTATCCCTTCATCTGTGGATGGGCAGAATGAAACATATATGGAAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653458.1 |