Pregenerated sensors for C2CD4D (Homo sapiens)
Ensembl gene IDs: ENSG00000225556Ensembl transcript IDs: ENST00000454109.1
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGTCGCGGCCCGCCAGGTaGGGCAGCGAGCAGGTCGCG | + |
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Preference number: 4 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQSRPAR*GSEQVA Trigger: CGCGACCTGCTCGCTGCCTCACCTGGCGGGCCGCGA...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR TCA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGCGCCCGGGCCCGGCCTaGTATTCGGTGGAGAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQRPGPA*YSVESR Trigger: GCGGCTCTCCACCGAATATCAGGCCGGGCCCGGGCG...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CCA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGTCGGCGGAGCGGGGCTaGGCGAGGAGCGCAGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQSAERG*ARSAEE Trigger: CTCCTCTGCGCTCCTCGCCCAGCCCCGCTCCGCCGA...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR TCA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGGGGGCAGCAGCGCAATaGGGGGCGTCTCGCACTCCC | + |
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Preference number: 4 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQGAAAQ*GASRTP Trigger: GGGAGTGCGAGACGCCCCTCATTGCGCTGCTGCCCC...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR GCA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCATCCCGCCGGCGCGTGTaGGGGCTCTCGGGCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: KECGLQTQWRRPEEARGSSRRRV*GLSGRK Trigger: CTTCCTGCCCGAGAGCCCGCACACGCGCCGGCGGGA...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR GCA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCACCTTGGCTCTCAGGCTaGGGGCGGCCAGGTCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: KECGLQTQWRRPEEARGSPWLSG*GRPGPG Trigger: CCCCGGACCTGGCCGCCCGCAGCCTGAGAGCCAAGG...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CCA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGGCAGGTGGCGGCCCGTaGAACAGGGATTCCCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQAGGGP*NRDSRR Trigger: CCGGCGGGAATCCCTGTTCCACGGGCCGCCACCTGC...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR TCA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGGATGCGATCCGGGGTaGGGACGTTGGGGCAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: KECGLQTQWRRPEEARGSGCDPG*GRWGRR Trigger: GCGCCTGCCCCAACGTCCTCACCCCGGATCGCATCC...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR TCA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGGCTCAGGCTACAGGCTaGGATGGGTGGGCGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQAQATG*DGWAPG Trigger: CCCTGGCGCCCACCCATCTCAGCCTGTAGCCTGAGC...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR GCA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCATTGACCACGCGGCTCTaGTGCTCCCGCGGCCGGACG | + |
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Preference number: 4 (lower is better) Translates to: KECGLQTQWRRPEEARGSLTTRL*CSRGRT Trigger: CGTCCGGCCGCGGGAGCAGCAGAGCCGCGTGGTCAA...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CCA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCACCGGGGCGCGACGCTTaGAGAACAGGCCGGAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: KECGLQTQWRRPEEARGSPGRDA*RTGRKA Trigger: CGCCTTCCGGCCTGTTCTCCAAGCGTCGCGCCCCGG...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CCA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGACAGAGAGTGAGGCCTaGACACCCGGCGCCGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQTESEA*TPGAGP Trigger: TGGGCCGGCGCCGGGTGTCCAGGCCTCACTCTCTGT...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CCA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGCACGCTCTCGCGCGTaGGCCGCAGCTGGCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: KECGLQTQWRRPEEARGSARSRA*AAAGST Trigger: TGTGCTGCCAGCTGCGGCCCACGCGCGAGAGCGTGC...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR TCA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCATCTGGGGACAGAGAGTaGGGCCTGGACACCCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: KECGLQTQWRRPEEARGSSGDRE*GLDTRR Trigger: GCGCCGGGTGTCCAGGCCTCACTCTCTGTCCCCAGA...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR GCA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGCCAGCAGCACATCCCTaGGAAGTCCCGCGCCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQPAAHP*EVPRPC Trigger: ACAGGGGCGCGGGACTTCGCAGGGATGTGCTGCTGG...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CCA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGCGGCGAGTGCGGGCTaGTATCGGCCGAGCTCGCTT | + |
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Preference number: 4 (lower is better) Translates to: KECGLQTQWRRPEEARGSAASAG*YRPSSL Trigger: AAGCGAGCTCGGCCGATACCAGCCCGCACTCGCCGC...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CCA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGCACAGGAAGTCCAGGTaGAAGAGCGGCGGCGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQHRKSR*KSGGVG Trigger: GCCCACGCCGCCGCTCTTCCACCTGGACTTCCTGTG...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CCA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGCCCTGTCTAGCACCTTaGCTCTCAGGCTGCGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQPCLAP*LSGCGR Trigger: CCGCCCGCAGCCTGAGAGCCAAGGTGCTAGACAGGG...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR TCA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGGGAGTCAGAGGTGAGTaGTGCTGGCGTACACCGGGC | + |
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Preference number: 4 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQGVRGE*CWRTPG Trigger: GCCCGGTGTACGCCAGCATCACTCACCTCTGACTCC...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR TCA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGGGAGCCGAGGCGGGATaGAGAACTGCGGGATGCGAT | + |
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Preference number: 4 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQGAEAG*RTAGCD Trigger: ATCGCATCCCGCAGTTCTTCATCCCGCCTCGGCTCC...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR TCA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGACAGTGGAGACGTCCTaGGGAAGCCAGGGGCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQTVETS*GSQGLR Trigger: CCTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGT...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CCA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCACGGCCTGATATTCGGTaGAGAGCCGCAGCTGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: KECGLQTQWRRPEEARGSRPDIR*RAAAAR Trigger: GCGGGCAGCTGCGGCTCTCCACCGAATATCAGGCCG...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CCA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGGGCTACAGGCTGAGATaGGTGGGCGCCAGGGATGAC | + |
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Preference number: 4 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQGYRLR*VGARDD Trigger: GTCATCCCTGGCGCCCACCCATCTCAGCCTGTAGCC...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR GCA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGAAACACAGCTCTGTCTaGGCGGCCATCAGCCCGGTC | + |
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Preference number: 4 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQKHSSV*AAISPV Trigger: GACCGGGCTGATGGCCGCGCAGACAGAGCTGTGTTT...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CCA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGAAGGGCGGCGCAGTCTaGGGGGCTCTTTTCCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQKGGAV*GALFLD Trigger: ATCCAGGAAAAGAGCCCCCCAGACTGCGCCGCCCTT...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CCA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGGTCTCCGGACCCACTaGGAGCGCGGACCCCTATTT | + |
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Preference number: 4 (lower is better) Translates to: KECGLQTQWRRPEEARGSGLRTH*ERGPLF Trigger: AAATAGGGGTCCGCGCTCCCAGTGGGTCCGGAGACC...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR GCA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGTGGCCACTTCTTTGGTaGTCGGTTCCAACCCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQWPLLW*SVPTPA Trigger: GGCTGGGGTTGGAACCGAGCACCAAAGAAGTGGCCA...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CCA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAAAATCCCGTCTCAGATaGGAGTGCTCGGCGGAGCGG | + |
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Preference number: 4 (lower is better) Translates to: KECGLQTQWRRPEEARGSKSRLR*ECSAER Trigger: CCGCTCCGCCGAGCACTCCCATCTGAGACGGGATTT...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR TCA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAATCAGCCCGGTCTTCTaGCTTCCTCCAGCTGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: KECGLQTQWRRPEEARGSISPVF*LPPAEA Trigger: GGCTTCAGCTGGAGGAAGTCAGAAGACCGGGCTGAT...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR GCA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCATCCTGGTTGAAATCCTaGCTTGGCCCCCAGTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: KECGLQTQWRRPEEARGSSWLKS*LGPQCP Trigger: AGGGCACTGGGGGCCAAGGCAGGATTTCAACCAGGA...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CCA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGCCCAGTGCCCTGTTCTaGAGCCATTCCAATAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQPSALF*SHSNSS Trigger: GGAGCTATTGGAATGGCTCCAGAACAGGGCACTGGG...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CCA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGCAGTGGCCACTTCTTTaGTGCTCGGTTCCAACCCCA | + |
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Preference number: 4 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQQWPLL*CSVPTP Trigger: TGGGGTTGGAACCGAGCACCAAAGAAGTGGCCACTG...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CCA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGCGAGCTCGCTTTTTCTaGGGACAGAGAGTGAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQRARFF*GQRVRP Trigger: AGGCCTCACTCTCTGTCCCCAGAAAAAGCGAGCTCG...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CCA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGGACTGCAGACACAGTaGAGACGTCCTGAGGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: KECGLQTQWRRPEEARGSGLQTQ*RRPEEA Trigger: GGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCC...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CCA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGACAAGCCGGGCAGGGTaGAAAGAATGTGGACTGCAG | + |
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Preference number: 4 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQTSRAG*KECGLQ Trigger: CTGCAGTCCACATTCTTTCCACCCTGCCCGGCTTGT...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR TCA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGCGCGGACCCCTATTTaGGCAGAAAAAGAAAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: KECGLQTQWRRPEEARGSARTPI*AEKERA Trigger: CGCCCTTTCTTTTTCTGCTCAAATAGGGGTCCGCGC...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CCA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGGAGACGGCCATCAGTaGACAGTGGCCACTTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: KECGLQTQWRRPEEARGSGDGHQ*TVATSL Trigger: CAAAGAAGTGGCCACTGTCCACTGATGGCCGTCTCC...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR TCA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCACTGACTTCCTCCAGCTaGAGCCAGGTTTCTAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: KECGLQTQWRRPEEARGSLTSSS*SQVSSN Trigger: GTTGCTAGAAACCTGGCTTCAGCTGGAGGAAGTCAG...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR GCA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCATTTCCAAGAGCCACATaGGGTGGGTGGGGTAATGGA | + |
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Preference number: 4 (lower is better) Translates to: KECGLQTQWRRPEEARGSFPRAT*GGWGNG Trigger: TCCATTACCCCACCCACCGCATGTGGCTCTTGGAAA...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CCA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGCCACATGCGGTGGGTaGGGTAATGGAATTCCGAAT | + |
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Preference number: 4 (lower is better) Translates to: KECGLQTQWRRPEEARGSATCGG*GNGIPN Trigger: ATTCGGAATTCCATTACCCCACCCACCGCATGTGGC...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR TCA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAAGCTCCAAGGCAGAGTaGCTTGCAGTGATCAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: KECGLQTQWRRPEEARGSSSKAE*LAVISC Trigger: ACAACTGATCACTGCAAGTCACTCTGCCTTGGAGCT...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR TCA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCACCCAGCCCTCACAGGTaGAGTCCATCTTCTGTAAAA | + |
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Preference number: 4 (lower is better) Translates to: KECGLQTQWRRPEEARGSPSPHR*SPSSVK Trigger: TTTTACAGAAGATGGACTTCACCTGTGAGGGCTGGG...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR TCA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAAAAAGAAATCCTCGTTaGAGATGGGGTTGGCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: KECGLQTQWRRPEEARGSKRNPR*RWGWRC Trigger: GCAGCGCCAACCCCATCTTCAACGAGGATTTCTTTT...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR GCA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCACAAGGCAGAGTGACTTaGAGTGATCAGTTGTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: KECGLQTQWRRPEEARGSQGRVT*SDQLSA Trigger: TGCAGACAACTGATCACTGCAAGTCACTCTGCCTTG...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CCA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCATCTGTAAAACCCTCCTaGTTGAAATCCTGCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: KECGLQTQWRRPEEARGSSVKPS*LKSCLG Trigger: GCCAAGGCAGGATTTCAACCAGGAGGGTTTTACAGA...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR TCA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGCAGAGTGACTTGCAGTaGTCAGTTGTCTGCATTATT | + |
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Preference number: 4 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQQSDLQ*SVVCII Trigger: AATAATGCAGACAACTGATCACTGCAAGTCACTCTG...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS TCA 90 bp | TGCGGGCTCTCGGGCAGGAAGGCCCAGCCTTCGCGGCCCGCCAGGTaGGGCAGCGAGCAGGTCGCGGGGAGGCCGCGCCCCGCCACGTGC | + |
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Preference number: 5 (lower is better) Translates to: CGLSGRKAQPSRPAR*GSEQVAGRPRPATC Trigger: GCACGTGGCGGGGCGCGGCCTCCCCGCGACCTGCTCGCTGCCTCACCTGGCGGGCCGCGAAGGCTGGGCCTTCCTGCCCGAGAGCCCGCA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS GCA 90 bp | GGGGCAGGTGGCGGCCCGTGGAACAGGGATTCCCGCCGGCGCGTGTaGGGGCTCTCGGGCAGGAAGGCCCAGCCTTCGCGGCCCGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: GAGGGPWNRDSRRRV*GLSGRKAQPSRPAR Trigger: CCTGGCGGGCCGCGAAGGCTGGGCCTTCCTGCCCGAGAGCCCGCACACGCGCCGGCGGGAATCCCTGTTCCACGGGCCGCCACCTGCCCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS CCA 90 bp | GCCGCAGCTGGCAGCACAGGAAGTCCAGGTGGAAGAGCGGCGGCGTaGGCGGCCCGGCGCGGCGCGGCGAGTGCGGGCTGGTATCGGCCG | + |
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Preference number: 5 (lower is better) Translates to: AAAGSTGSPGGRAAA*AARRGAASAGWYRP Trigger: CGGCCGATACCAGCCCGCACTCGCCGCGCCGCGCCGGGCCGCCCACGCCGCCGCTCTTCCACCTGGACTTCCTGTGCTGCCAGCTGCGGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS CCA 90 bp | ACGCTCTCGCGCGTGGGCCGCAGCTGGCAGCACAGGAAGTCCAGGTaGAAGAGCGGCGGCGTGGGCGGCCCGGCGCGGCGCGGCGAGTGC | + |
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Preference number: 5 (lower is better) Translates to: TLSRVGRSWQHRKSR*KSGGVGGPARRGEC Trigger: GCACTCGCCGCGCCGCGCCGGGCCGCCCACGCCGCCGCTCTTCCACCTGGACTTCCTGTGCTGCCAGCTGCGGCCCACGCGCGAGAGCGT 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS TCA 90 bp | GCTCGGCGGAGCGGGGCTGGGCGAGGAGCGCAGAGGAGTCAGAGGTaGGTGATGCTGGCGTACACCGGGCGGTCAGCCACCGCGCCCCGG | + |
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Preference number: 5 (lower is better) Translates to: ARRSGAGRGAQRSQR*VMLAYTGRSATAPR Trigger: CCGGGGCGCGGTGGCTGACCGCCCGGTGTACGCCAGCATCACTCACCTCTGACTCCTCTGCGCTCCTCGCCCAGCCCCGCTCCGCCGAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS CCA 90 bp | AGAGCGGCGGCGTGGGCGGCCCGGCGCGGCGCGGCGAGTGCGGGCTaGTATCGGCCGAGCTCGCTTTTTCTGGGGACAGAGAGTGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: RAAAWAARRGAASAG*YRPSSLFLGTESEA Trigger: GGCCTCACTCTCTGTCCCCAGAAAAAGCGAGCTCGGCCGATACCAGCCCGCACTCGCCGCGCCGCGCCGGGCCGCCCACGCCGCCGCTCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS TCA 90 bp | GGCGGAGCGGGGCTGGGCGAGGAGCGCAGAGGAGTCAGAGGTGAGTaGTGCTGGCGTACACCGGGCGGTCAGCCACCGCGCCCCGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: GGAGLGEERRGVRGE*CWRTPGGQPPRPGL Trigger: GAGACCGGGGCGCGGTGGCTGACCGCCCGGTGTACGCCAGCATCACTCACCTCTGACTCCTCTGCGCTCCTCGCCCAGCCCCGCTCCGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS GCA 90 bp | TCGTTGAAGATGGGGTTGGCGCTGCACTTGACCACGCGGCTCTGCTaGTCCCGCGGCCGGACGCGGGGCCGCAGCCTCAGCACCACACAG | + |
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Preference number: 5 (lower is better) Translates to: SLKMGLALHLTTRLC*SRGRTRGRSLSTTQ Trigger: CTGTGTGGTGCTGAGGCTGCGGCCCCGCGTCCGGCCGCGGGAGCAGCAGAGCCGCGTGGTCAAGTGCAGCGCCAACCCCATCTTCAACGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS GCA 90 bp | TCCTCGTTGAAGATGGGGTTGGCGCTGCACTTGACCACGCGGCTCTaGTGCTCCCGCGGCCGGACGCGGGGCCGCAGCCTCAGCACCACA | + |
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Preference number: 5 (lower is better) Translates to: SSLKMGLALHLTTRL*CSRGRTRGRSLSTT Trigger: TGTGGTGCTGAGGCTGCGGCCCCGCGTCCGGCCGCGGGAGCAGCAGAGCCGCGTGGTCAAGTGCAGCGCCAACCCCATCTTCAACGAGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS CCA 90 bp | TGGAGACGTCCTGAGGAAGCCAGGGGCTCAGGCTACAGGCTGAGATaGGTGGGCGCCAGGGATGACCCGGGACCTAGTCCCCCACCCAGC | + |
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Preference number: 5 (lower is better) Translates to: WRRPEEARGSGYRLR*VGARDDPGPSPPPS Trigger: GCTGGGTGGGGGACTAGGTCCCGGGTCATCCCTGGCGCCCACCCATCTCAGCCTGTAGCCTGAGCCCCTGGCTTCCTCAGGACGTCTCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS CCA 90 bp | ATTCCGAATTCCGCAGGGCCGAGAGGGTCCAAATCCCGTCTCAGATaGGAGTGCTCGGCGGAGCGGGGCTGGGCGAGGAGCGCAGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: IPNSAGPRGSKSRLR*ECSAERGWARSAEE Trigger: CTCCTCTGCGCTCCTCGCCCAGCCCCGCTCCGCCGAGCACTCCCATCTGAGACGGGATTTGGACCCTCTCGGCCCTGCGGAATTCGGAAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CAA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGCCCGGGGCGCGACGCTaGGAGAACAGGCCGGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQPGARR*ENRPEG Trigger: GCCTTCCGGCCTGTTCTCCAAGCGTCGCGCCCCGGG...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CAA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCATCCGGGGTGAGGACGTaGGGGCAGGCGCTTGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: KECGLQTQWRRPEEARGSSGVRT*GQALVG Trigger: GCCCACAAGCGCCTGCCCCAACGTCCTCACCCCGGA...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CAA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGGGTTGGCGCTGCACTaGACCACGCGGCTCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: KECGLQTQWRRPEEARGSGLALH*TTRLCC Trigger: GCAGCAGAGCCGCGTGGTCAAGTGCAGCGCCAACCC...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CAA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCACCCCTGTCTAGCACCTaGGCTCTCAGGCTGCGGGCG | + |
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Preference number: 5 (lower is better) Translates to: KECGLQTQWRRPEEARGSPLSST*ALRLRA Trigger: CGCCCGCAGCCTGAGAGCCAAGGTGCTAGACAGGGG...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS GCA 90 bp | GAGAAGAGGGAGACGGCCATCAGTGGACAGTGGCCACTTCTTTGGTaGTCGGTTCCAACCCCAGCCCTCACAGGTGAAGTCCATCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: EKRETAISGQWPLLW*SVPTPALTGEVHLL Trigger: CAGAAGATGGACTTCACCTGTGAGGGCTGGGGTTGGAACCGAGCACCAAAGAAGTGGCCACTGTCCACTGATGGCCGTCTCCCTCTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS CCA 90 bp | AATACAAGCCGGGCAGGGTGGAAAGAATGTGGACTGCAGACACAGTaGAGACGTCCTGAGGAAGCCAGGGGCTCAGGCTACAGGCTGAGA | + |
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Preference number: 5 (lower is better) Translates to: NTSRAGWKECGLQTQ*RRPEEARGSGYRLR Trigger: TCTCAGCCTGTAGCCTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTTCCACCCTGCCCGGCTTGTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CAA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGACAGTGGCCACTTCTTaGGTGCTCGGTTCCAACCCC | + |
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Preference number: 5 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQTVATS*VLGSNP Trigger: GGGGTTGGAACCGAGCACCAAAGAAGTGGCCACTGT...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS CCA 90 bp | ACAGAGAAGAGGGAGACGGCCATCAGTGGACAGTGGCCACTTCTTTaGTGCTCGGTTCCAACCCCAGCCCTCACAGGTGAAGTCCATCTT | + |
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Preference number: 5 (lower is better) Translates to: TEKRETAISGQWPLL*CSVPTPALTGEVHL Trigger: AAGATGGACTTCACCTGTGAGGGCTGGGGTTGGAACCGAGCACCAAAGAAGTGGCCACTGTCCACTGATGGCCGTCTCCCTCTTCTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS CCA 90 bp | CCCCCACCTTATAGCCAGCTTTTTCCAAGAGCCACATGCGGTGGGTaGGGTAATGGAATTCCGAATTCCGCAGGGCCGAGAGGGTCCAAA | + |
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Preference number: 5 (lower is better) Translates to: PPPYSQLFPRATCGG*GNGIPNSAGPRGSK Trigger: TTTGGACCCTCTCGGCCCTGCGGAATTCGGAATTCCATTACCCCACCCACCGCATGTGGCTCTTGGAAAAAGCTGGCTATAAGGTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CAA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGGTAAAACCCTCCTGGTaGAAATCCTGCCTTGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQVKPSW*KSCLGP Trigger: GGGGCCAAGGCAGGATTTCAACCAGGAGGGTTTTAC...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CAA 90 bp | AAAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCATCGTTGAAGATGGGGTaGGCGCTGCACTTGACCACG | + |
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Preference number: 5 (lower is better) Translates to: KECGLQTQWRRPEEARGSSLKMG*ALHLTT Trigger: CGTGGTCAAGTGCAGCGCCAACCCCATCTTCAACGA...TGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CAA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGAGCGCGGACCCCTATTaGAGCAGAAAAAGAAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQSADPY*SRKRKG Trigger: GCCCTTTCTTTTTCTGCTCAAATAGGGGTCCGCGCT...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS TCA 90 bp | CTGGATAAACACAGCTCTGTCTGCGCGGCCATCAGCCCGGTCTTCTaGCTTCCTCCAGCTGAAGCCAGGTTTCTAGCAACAATCCATTCC | + |
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Preference number: 5 (lower is better) Translates to: LDKHSSVCAAISPVF*LPPAEARFLATIHS Trigger: GGAATGGATTGTTGCTAGAAACCTGGCTTCAGCTGGAGGAAGTCAGAAGACCGGGCTGATGGCCGCGCAGACAGAGCTGTGTTTATCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS-3UTR CAA 90 bp | AAGAATGTGGACTGCAGACACAGTGGAGACGTCCTGAGGAAGCCAGGGGCTCAGAAAAAGAAATCCTCGTaGAAGATGGGGTTGGCGCTG | + |
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Preference number: 5 (lower is better) Translates to: KNVDCRHSGDVLRKPGAQKKKSS*KMGLAL Trigger: CAGCGCCAACCCCATCTTCAACGAGGATTTCTTTTT...CTGAGCCCCTGGCTTCCTCAGGACGTCTCCACTGTGTCTGCAGTCCACATTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS GCA 72 bp | AGCGGCGGCGTGGGCGGCCCGGCGCGGCGCGGCGAGTaGGGGCTGGTATCGGCCGAGCTCGCTTTTTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SGGVGGPARRGE*GLVSAELAFSG Trigger: CCCAGAAAAAGCGAGCTCGGCCGATACCAGCCCGCACTCGCCGCGCCGCGCCGGGCCGCCCACGCCGCCGCT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS CCA 72 bp | GGCAGGCGCTTGTGGGCGGGCCCGGGGCGCGACGCTTaGAGAACAGGCCGGAAGGCGCCCAACGGGCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: GRRLWAGPGRDA*RTGRKAPNGPQ Trigger: CTGCGGCCCGTTGGGCGCCTTCCGGCCTGTTCTCCAAGCGTCGCGCCCCGGGCCCGCCCACAAGCGCCTGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS CCA 72 bp | AGAGTGAGGCCTGGACACCCGGCGCCGGCCCAGGCCTaGCCGCGGGGAGCCGAAGGGCGACGAGTCCGGCGA | + |
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Preference number: 6 (lower is better) Translates to: RVRPGHPAPAQA*PRGAEGRRVRR Trigger: TCGCCGGACTCGTCGCCCTTCGGCTCCCCGCGGCCAGGCCTGGGCCGGCGCCGGGTGTCCAGGCCTCACTCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS CAA 72 bp | GGGCAGGCGCTTGTGGGCGGGCCCGGGGCGCGACGCTaGGAGAACAGGCCGGAAGGCGCCCAACGGGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: GQALVGGPGARR*ENRPEGAQRAA Trigger: TGCGGCCCGTTGGGCGCCTTCCGGCCTGTTCTCCAAGCGTCGCGCCCCGGGCCCGCCCACAAGCGCCTGCCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS GCA 72 bp | GGCGGCCCGTGGAACAGGGATTCCCGCCGGCGCGTGTaGGGGCTCTCGGGCAGGAAGGCCCAGCCTTCGCGG | + |
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Preference number: 6 (lower is better) Translates to: GGPWNRDSRRRV*GLSGRKAQPSR Trigger: CCGCGAAGGCTGGGCCTTCCTGCCCGAGAGCCCGCACACGCGCCGGCGGGAATCCCTGTTCCACGGGCCGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS GCA 72 bp | ATGGGGTTGGCGCTGCACTTGACCACGCGGCTCTGCTaGTCCCGCGGCCGGACGCGGGGCCGCAGCCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: MGLALHLTTRLC*SRGRTRGRSLS Trigger: GCTGAGGCTGCGGCCCCGCGTCCGGCCGCGGGAGCAGCAGAGCCGCGTGGTCAAGTGCAGCGCCAACCCCAT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS GCA 72 bp | AAGATGGGGTTGGCGCTGCACTTGACCACGCGGCTCTaGTGCTCCCGCGGCCGGACGCGGGGCCGCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: KMGLALHLTTRL*CSRGRTRGRSL Trigger: GAGGCTGCGGCCCCGCGTCCGGCCGCGGGAGCAGCAGAGCCGCGTGGTCAAGTGCAGCGCCAACCCCATCTT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS CCA 72 bp | CCGAGCTCGCTTTTTCTGGGGACAGAGAGTGAGGCCTaGACACCCGGCGCCGGCCCAGGCCTGGCCGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: PSSLFLGTESEA*TPGAGPGLAAG Trigger: CCCCGCGGCCAGGCCTGGGCCGGCGCCGGGTGTCCAGGCCTCACTCTCTGTCCCCAGAAAAAGCGAGCTCGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS TCA 72 bp | GGGCTGGGCGAGGAGCGCAGAGGAGTCAGAGGTGAGTaGTGCTGGCGTACACCGGGCGGTCAGCCACCGCGC | + |
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Preference number: 6 (lower is better) Translates to: GLGEERRGVRGE*CWRTPGGQPPR Trigger: GCGCGGTGGCTGACCGCCCGGTGTACGCCAGCATCACTCACCTCTGACTCCTCTGCGCTCCTCGCCCAGCCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS CCA 72 bp | TCCGCAGGGCCGAGAGGGTCCAAATCCCGTCTCAGATaGGAGTGCTCGGCGGAGCGGGGCTGGGCGAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SAGPRGSKSRLR*ECSAERGWARS Trigger: GCTCCTCGCCCAGCCCCGCTCCGCCGAGCACTCCCATCTGAGACGGGATTTGGACCCTCTCGGCCCTGCGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS TCA 72 bp | AGCGGGGCTGGGCGAGGAGCGCAGAGGAGTCAGAGGTaGGTGATGCTGGCGTACACCGGGCGGTCAGCCACC | + |
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Preference number: 6 (lower is better) Translates to: SGAGRGAQRSQR*VMLAYTGRSAT Trigger: GGTGGCTGACCGCCCGGTGTACGCCAGCATCACTCACCTCTGACTCCTCTGCGCTCCTCGCCCAGCCCCGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS TCA 72 bp | GTATCGGCCGAGCTCGCTTTTTCTGGGGACAGAGAGTaGGGCCTGGACACCCGGCGCCGGCCCAGGCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: VSAELAFSGDRE*GLDTRRRPRPG Trigger: GCCAGGCCTGGGCCGGCGCCGGGTGTCCAGGCCTCACTCTCTGTCCCCAGAAAAAGCGAGCTCGGCCGATAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS GCA 72 bp | GAGACGGCCATCAGTGGACAGTGGCCACTTCTTTGGTaGTCGGTTCCAACCCCAGCCCTCACAGGTGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: ETAISGQWPLLW*SVPTPALTGEV Trigger: GACTTCACCTGTGAGGGCTGGGGTTGGAACCGAGCACCAAAGAAGTGGCCACTGTCCACTGATGGCCGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS CCA 72 bp | AGGGAGACGGCCATCAGTGGACAGTGGCCACTTCTTTaGTGCTCGGTTCCAACCCCAGCCCTCACAGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: RETAISGQWPLL*CSVPTPALTGE Trigger: TTCACCTGTGAGGGCTGGGGTTGGAACCGAGCACCAAAGAAGTGGCCACTGTCCACTGATGGCCGTCTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS TCA 72 bp | CACAGCTCTGTCTGCGCGGCCATCAGCCCGGTCTTCTaGCTTCCTCCAGCTGAAGCCAGGTTTCTAGCAACA | + |
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Preference number: 6 (lower is better) Translates to: HSSVCAAISPVF*LPPAEARFLAT Trigger: TGTTGCTAGAAACCTGGCTTCAGCTGGAGGAAGTCAGAAGACCGGGCTGATGGCCGCGCAGACAGAGCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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| CDS CCA 72 bp | TATAGCCAGCTTTTTCCAAGAGCCACATGCGGTGGGTaGGGTAATGGAATTCCGAATTCCGCAGGGCCGAGA | + |
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Preference number: 6 (lower is better) Translates to: YSQLFPRATCGG*GNGIPNSAGPR Trigger: TCTCGGCCCTGCGGAATTCGGAATTCCATTACCCCACCCACCGCATGTGGCTCTTGGAAAAAGCTGGCTATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454109.1 |
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