RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C2CD4C (Homo sapiens)

Ensembl gene IDs: ENSG00000183186

Ensembl transcript IDs: ENST00000332235.8

Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGCCCCAGCCCAAGCCAGCGGACCCGCCCGCCAGCACCCGGTGTaGAGGAGAGACCGGGGTCTGCCCTCTGCACCCGAGCGGACAGCG +
Preference number: 1 (lower is better)
Translates to: PAPAQASGPARQHPV*RRDRGLPSAPERTA
Trigger: CGCTGTCCGCTCGGGTGCAGAGGGCAGACCCCGGTCTCTCCTCCACACCGGGTGCTGGCGGGCGGGTCCGCTGGCTTGGGCTGGGGCTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR GCA 90 bp GCGGACCTCTGCCAAGACCTCCTCTGCTCCGACTGTGGCAGCGGCTaGTCCCTCCGCGCCCACCCTCGTCAGGGCACCCTCGCCTGGCCC +
Preference number: 1 (lower is better)
Translates to: ADLCQDLLCSDCGSG*SLRAHPRQGTLAWP
Trigger: GGGCCAGGCGAGGGTGCCCTGACGAGGGTGGGCGCGGAGGGAGCAGCCGCTGCCACAGTCGGAGCAGAGGAGGTCTTGGCAGAGGTCCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR GCA 90 bp CAGGAGAGCCGTCTCCTCCCCGCGGACCTCTGCCAAGACCTCCTCTaGTCCGACTGTGGCAGCGGCTGCTCCCTCCGCGCCCACCCTCGT +
Preference number: 1 (lower is better)
Translates to: QESRLLPADLCQDLL*SDCGSGCSLRAHPR
Trigger: ACGAGGGTGGGCGCGGAGGGAGCAGCCGCTGCCACAGTCGGAGCAGAGGAGGTCTTGGCAGAGGTCCGCGGGGAGGAGACGGCTCTCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR CCA 90 bp AGAGCCTGGGCCTGGTGTGGCCGCGAGGCCCTGCTCTCCGCGGGGTaGGAACTGGATGGCGGCAGGCTGTGGGGGAGGAAGACACACGTG +
Preference number: 1 (lower is better)
Translates to: RAWAWCGREALLSAG*ELDGGRLWGRKTHV
Trigger: CACGTGTGTCTTCCTCCCCCACAGCCTGCCGCCATCCAGTTCCCACCCCGCGGAGAGCAGGGCCTCGCGGCCACACCAGGCCCAGGCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR CCA 90 bp TCTCCTCCCCGCGGACCTCTGCCAAGACCTCCTCTGCTCCGACTGTaGCAGCGGCTGCTCCCTCCGCGCCCACCCTCGTCAGGGCACCCT +
Preference number: 1 (lower is better)
Translates to: SPPRGPLPRPPLLRL*QRLLPPRPPSSGHP
Trigger: AGGGTGCCCTGACGAGGGTGGGCGCGGAGGGAGCAGCCGCTGCCACAGTCGGAGCAGAGGAGGTCTTGGCAGAGGTCCGCGGGGAGGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR GCA 90 bp AGCCTCCGCCCTGGGTGCCCTGGCTTCCGGGAGAGAGCGGAGCCCTaGAACACCAGGCTCAGAAGGGGCCTGCACTCTCCCTCTGGAGGG +
Preference number: 1 (lower is better)
Translates to: SLRPGCPGFRERAEP*NTRLRRGLHSPSGG
Trigger: CCCTCCAGAGGGAGAGTGCAGGCCCCTTCTGAGCCTGGTGTTGCAGGGCTCCGCTCTCTCCCGGAAGCCAGGGCACCCAGGGCGGAGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR CCA 90 bp GGGCCTGGTGTGGCCGCGAGGCCCTGCTCTCCGCGGGGTGGGAACTaGATGGCGGCAGGCTGTGGGGGAGGAAGACACACGTGCAGTGAA +
Preference number: 1 (lower is better)
Translates to: GPGVAARPCSPRGGN*MAAGCGGGRHTCSE
Trigger: TTCACTGCACGTGTGTCTTCCTCCCCCACAGCCTGCCGCCATCCAGTTCCCACCCCGCGGAGAGCAGGGCCTCGCGGCCACACCAGGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR CCA 90 bp CTGGTGTGGCCGCGAGGCCCTGCTCTCCGCGGGGTGGGAACTGGATaGCGGCAGGCTGTGGGGGAGGAAGACACACGTGCAGTGAAGGAG +
Preference number: 1 (lower is better)
Translates to: LVWPRGPALRGVGTG*RQAVGEEDTRAVKE
Trigger: CTCCTTCACTGCACGTGTGTCTTCCTCCCCCACAGCCTGCCGCCATCCAGTTCCCACCCCGCGGAGAGCAGGGCCTCGCGGCCACACCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR CCA 90 bp GGAGCCCTGCAACACCAGGCTCAGAAGGGGCCTGCACTCTCCCTCTaGAGGGCTCACAGGTGTGTCCCACCGGACGTGCAGCAGGGGCCC +
Preference number: 1 (lower is better)
Translates to: GALQHQAQKGPALSL*RAHRCVPPDVQQGP
Trigger: GGGCCCCTGCTGCACGTCCGGTGGGACACACCTGTGAGCCCTCCAGAGGGAGAGTGCAGGCCCCTTCTGAGCCTGGTGTTGCAGGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR TCA 90 bp CCCAGCGAGGACGGATGGGCCATAGGGCTGCTCTCTGGGCATCTCTaGGCAAGACCCTCCGGCGCCACAGCAGAAATGGCCAGACGGGCC +
Preference number: 1 (lower is better)
Translates to: PSEDGWAIGLLSGHL*ARPSGATAEMARRA
Trigger: GGCCCGTCTGGCCATTTCTGCTGTGGCGCCGGAGGGTCTTGCTCAGAGATGCCCAGAGAGCAGCCCTATGGCCCATCCGTCCTCGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR GCA 90 bp TCCGGGAGAGAGCGGAGCCCTGCAACACCAGGCTCAGAAGGGGCCTaGACTCTCCCTCTGGAGGGCTCACAGGTGTGTCCCACCGGACGT +
Preference number: 1 (lower is better)
Translates to: SGRERSPATPGSEGA*TLPLEGSQVCPTGR
Trigger: ACGTCCGGTGGGACACACCTGTGAGCCCTCCAGAGGGAGAGTGCAGGCCCCTTCTGAGCCTGGTGTTGCAGGGCTCCGCTCTCTCCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR GCA 90 bp TGTGGCAAACGGGCTGACAAGGGACGTCCCTGGGTACCACAGATGTaGCCTGGTTCCTCCGTGCCCACCAGCAGCCGGGAGAGGCGAAGG +
Preference number: 1 (lower is better)
Translates to: CGKRADKGRPWVPQM*PGSSVPTSSRERRR
Trigger: CCTTCGCCTCTCCCGGCTGCTGGTGGGCACGGAGGAACCAGGGCACATCTGTGGTACCCAGGGACGTCCCTTGTCAGCCCGTTTGCCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR TCA 90 bp CACCTCCCTGTCCACGGCCCCGCCCTGGCCACATGCACGGATTCCTaGACCCCTGAGAACCTCCTTCTAGAACTCTGCGTGAAAGGCGCG +
Preference number: 1 (lower is better)
Translates to: HLPVHGPALATCTDS*TPENLLLELCVKGA
Trigger: CGCGCCTTTCACGCAGAGTTCTAGAAGGAGGTTCTCAGGGGTTCAGGAATCCGTGCATGTGGCCAGGGCGGGGCCGTGGACAGGGAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR CCA 90 bp CTGGGCTCCGACCCACCCACCGTAGCCACAGCCTATTTACACACGTaGCGTCAAAGCCACGGCCGTCAATCACTGCGTGTCGCTCCCAGC +
Preference number: 1 (lower is better)
Translates to: LGSDPPTVATAYLHT*RQSHGRQSLRVAPS
Trigger: GCTGGGAGCGACACGCAGTGATTGACGGCCGTGGCTTTGACGCCACGTGTGTAAATAGGCTGTGGCTACGGTGGGTGGGTCGGAGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR TCA 90 bp TGTCCACGGCCCCGCCCTGGCCACATGCACGGATTCCTGAACCCCTaGGAACCTCCTTCTAGAACTCTGCGTGAAAGGCGCGAGGCAGTG +
Preference number: 1 (lower is better)
Translates to: CPRPRPGHMHGFLNP*EPPSRTLRERREAV
Trigger: CACTGCCTCGCGCCTTTCACGCAGAGTTCTAGAAGGAGGTTCTCAGGGGTTCAGGAATCCGTGCATGTGGCCAGGGCGGGGCCGTGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR TCA 90 bp GAACTGGATGGCGGCAGGCTGTGGGGGAGGAAGACACACGTGCAGTaGAGGAGACTGTGGGCTCCAAGACTTGTCACCTCCCTGTCCACG +
Preference number: 1 (lower is better)
Translates to: ELDGGRLWGRKTHVQ*RRLWAPRLVTSLST
Trigger: CGTGGACAGGGAGGTGACAAGTCTTGGAGCCCACAGTCTCCTTCACTGCACGTGTGTCTTCCTCCCCCACAGCCTGCCGCCATCCAGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR GCA 90 bp GGTGGGAACTGGATGGCGGCAGGCTGTGGGGGAGGAAGACACACGTaGAGTGAAGGAGACTGTGGGCTCCAAGACTTGTCACCTCCCTGT +
Preference number: 1 (lower is better)
Translates to: GGNWMAAGCGGGRHT*SEGDCGLQDLSPPC
Trigger: ACAGGGAGGTGACAAGTCTTGGAGCCCACAGTCTCCTTCACTGCACGTGTGTCTTCCTCCCCCACAGCCTGCCGCCATCCAGTTCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR GCA 90 bp CAGCCTATTTACACACGTGGCGTCAAAGCCACGGCCGTCAATCACTaGGTGTCGCTCCCAGCTGCAGACGCTGGACAAAAGGGCGACGGG +
Preference number: 1 (lower is better)
Translates to: QPIYTRGVKATAVNH*VSLPAADAGQKGDG
Trigger: CCCGTCGCCCTTTTGTCCAGCGTCTGCAGCTGGGAGCGACACGCAGTGATTGACGGCCGTGGCTTTGACGCCACGTGTGTAAATAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR CCA 90 bp ACAAGAGGAACAATGTGTGGCAAACGGGCTGACAAGGGACGTCCCTaGGTACCACAGATGTGCCCTGGTTCCTCCGTGCCCACCAGCAGC +
Preference number: 1 (lower is better)
Translates to: TRGTMCGKRADKGRP*VPQMCPGSSVPTSS
Trigger: GCTGCTGGTGGGCACGGAGGAACCAGGGCACATCTGTGGTACCCAGGGACGTCCCTTGTCAGCCCGTTTGCCACACATTGTTCCTCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR CCA 90 bp TGGAAACCTCCCCAAAATCATTCAAGGACCCACATAACCACACAATaGAAGCCTTGCAGCCACCTAACAGCAGGAAAGGCCATAGCCAGG +
Preference number: 1 (lower is better)
Translates to: WKPPQNHSRTHITTQ*KPCSHLTAGKAIAR
Trigger: CCTGGCTATGGCCTTTCCTGCTGTTAGGTGGCTGCAAGGCTTCCATTGTGTGGTTATGTGGGTCCTTGAATGATTTTGGGGAGGTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR-3UTR GCA 90 bp GTGCCCTGGTTCCTCCGTGCCCACCAGCAGCCGGGAGAGGCGAAGGCACTGGCCGGAGAGACCGGGGTCTaGCCTCTGCACCCGAGCGGA +
Preference number: 2 (lower is better)
Translates to: VPWFLRAHQQPGEAKALAGETGV*PLHPSG
Trigger: TCCGCTCGGGTGCAGAGGGCAGACCCCGGTCTCTCC...GGCCAGTGCCTTCGCCTCTCCCGGCTGCTGGTGGGCACGGAGGAACCAGGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR-3UTR CCA 90 bp GATGTGCCCTGGTTCCTCCGTGCCCACCAGCAGCCGGGAGAGGCGAAGGCACTGGCCAAGCCTGACCCCTaGGAGGGGGCGTCCCGGGCA +
Preference number: 2 (lower is better)
Translates to: DVPWFLRAHQQPGEAKALAKPDP*EGASRA
Trigger: TGCCCGGGACGCCCCCTCCCAGGGGTCAGGCTTGGC...CAGTGCCTTCGCCTCTCCCGGCTGCTGGTGGGCACGGAGGAACCAGGGCACATC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR-3UTR CCA 90 bp GATGTGCCCTGGTTCCTCCGTGCCCACCAGCAGCCGGGAGAGGCGAAGGCACTGCCCCCAGCTGCCTCCTaGGCTCCGACCCACCCACCG +
Preference number: 2 (lower is better)
Translates to: DVPWFLRAHQQPGEAKALPPAAS*APTHPP
Trigger: CGGTGGGTGGGTCGGAGCCCAGGAGGCAGCTGGGGG...CAGTGCCTTCGCCTCTCCCGGCTGCTGGTGGGCACGGAGGAACCAGGGCACATC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR-3UTR CCA 90 bp GATGTGCCCTGGTTCCTCCGTGCCCACCAGCAGCCGGGAGAGGCGAAGGCACTGAGCCTGGGCCTGGTGTaGCCGCGAGGCCCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: DVPWFLRAHQQPGEAKALSLGLV*PRGPAL
Trigger: GAGAGCAGGGCCTCGCGGCCACACCAGGCCCAGGCT...CAGTGCCTTCGCCTCTCCCGGCTGCTGGTGGGCACGGAGGAACCAGGGCACATC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR-3UTR CCA 90 bp AAGGGGCCTGCACTCTCCCTCTGGAGGGCTCACAGGTGTGTCCCACCGGACGTGGGCAGAGCCTGGGCCTaGTGTGGCCGCGAGGCCCTG +
Preference number: 2 (lower is better)
Translates to: KGPALSLWRAHRCVPPDVGRAWA*CGREAL
Trigger: CAGGGCCTCGCGGCCACACCAGGCCCAGGCTCTGCC...CACGTCCGGTGGGACACACCTGTGAGCCCTCCAGAGGGAGAGTGCAGGCCCCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR-3UTR CCA 90 bp GTGCCCTGGTTCCTCCGTGCCCACCAGCAGCCGGGAGAGGCGAAGGCACTGGCCGATGGCGGCAGGCTGTaGGGGAGGAAGACACACGTG +
Preference number: 2 (lower is better)
Translates to: VPWFLRAHQQPGEAKALADGGRL*GRKTHV
Trigger: CACGTGTGTCTTCCTCCCCCACAGCCTGCCGCCATC...GGCCAGTGCCTTCGCCTCTCCCGGCTGCTGGTGGGCACGGAGGAACCAGGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR-3UTR TCA 90 bp GCAGAGCCTGGGCCTGGTGTGGCCGCGAGGCCCTGCTCTCCGCGGGGTGGGAACAAGACACACGTGCAGTaGAGGAGACTGTGGGCTCCA +
Preference number: 2 (lower is better)
Translates to: AEPGPGVAARPCSPRGGNKTHVQ*RRLWAP
Trigger: TGGAGCCCACAGTCTCCTTCACTGCACGTGTGTCTT...GTTCCCACCCCGCGGAGAGCAGGGCCTCGCGGCCACACCAGGCCCAGGCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR-3UTR GCA 90 bp CGCCACAGCAGAAATGGCCAGACGGGCCTGTACCCAAAAAGCCAGCGGCGACAGGTGGCCGCGAGGCCCTaGTCTCCGCGGGGTGGGAAC +
Preference number: 2 (lower is better)
Translates to: RHSRNGQTGLYPKSQRRQVAARP*SPRGGN
Trigger: GTTCCCACCCCGCGGAGAGCAGGGCCTCGCGGCCAC...CTGTCGCCGCTGGCTTTTTGGGTACAGGCCCGTCTGGCCATTTCTGCTGTGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR-3UTR CCA 90 bp GGGCCTGCACTCTCCCTCTGGAGGGCTCACAGGTGTGTCCCACCGGACGTGCAGGCGAAGGCACTGGCCTaGCCTGGCCCCTGCTTTGAG +
Preference number: 2 (lower is better)
Translates to: GPALSLWRAHRCVPPDVQAKALA*PGPCFE
Trigger: CTCAAAGCAGGGGCCAGGCCAGGCCAGTGCCTTCGC...CTGCACGTCCGGTGGGACACACCTGTGAGCCCTCCAGAGGGAGAGTGCAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR-3UTR GCA 90 bp AGATGTGCCCTGGTTCCTCCGTGCCCACCAGCAGCCGGGAGAGGCGAAGGCACTCTCCCCGCGGACCTCTaGCAAGACCTCCTCTGCTCC +
Preference number: 2 (lower is better)
Translates to: RCALVPPCPPAAGRGEGTLPADL*QDLLCS
Trigger: GGAGCAGAGGAGGTCTTGGCAGAGGTCCGCGGGGAG...AGTGCCTTCGCCTCTCCCGGCTGCTGGTGGGCACGGAGGAACCAGGGCACATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR-3UTR CCA 90 bp CGCCACAGCAGAAATGGCCAGACGGGCCTGTACCCAAAAAGCCAGCGGCGACAGCGCCAGCACCCGGTGTaGAGGAGAGACCGGGGTCTG +
Preference number: 2 (lower is better)
Translates to: RHSRNGQTGLYPKSQRRQRQHPV*RRDRGL
Trigger: CAGACCCCGGTCTCTCCTCCACACCGGGTGCTGGCG...CTGTCGCCGCTGGCTTTTTGGGTACAGGCCCGTCTGGCCATTTCTGCTGTGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR-3UTR CCA 90 bp ACAAGGGACGTCCCTGGGTACCACAGATGTGCCCTGGTTCCTCCGTGCCCACCAGGGGTGGGAACTGGATaGCGGCAGGCTGTGGGGGAG +
Preference number: 2 (lower is better)
Translates to: TRDVPGYHRCALVPPCPPGVGTG*RQAVGE
Trigger: CTCCCCCACAGCCTGCCGCCATCCAGTTCCCACCCC...TGGTGGGCACGGAGGAACCAGGGCACATCTGTGGTACCCAGGGACGTCCCTTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR-3UTR TCA 90 bp GTGCCCTGGTTCCTCCGTGCCCACCAGCAGCCGGGAGAGGCGAAGGCACTGGCCACATGCACGGATTCCTaGACCCCTGAGAACCTCCTT +
Preference number: 2 (lower is better)
Translates to: VPWFLRAHQQPGEAKALATCTDS*TPENLL
Trigger: AAGGAGGTTCTCAGGGGTTCAGGAATCCGTGCATGT...GGCCAGTGCCTTCGCCTCTCCCGGCTGCTGGTGGGCACGGAGGAACCAGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR-3UTR CCA 90 bp GGAGGGCTCACAGGTGTGTCCCACCGGACGTGCAGCAGGGGCCCAGCTGCTCCTCATAGGGCTGCTCTCTaGGCATCTCTGAGCAAGACC +
Preference number: 2 (lower is better)
Translates to: GGLTGVSHRTCSRGPAAPHRAAL*ASLSKT
Trigger: GGTCTTGCTCAGAGATGCCCAGAGAGCAGCCCTATG...AGGAGCAGCTGGGCCCCTGCTGCACGTCCGGTGGGACACACCTGTGAGCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR CAA 90 bp GGAGGAAGACACACGTGCAGTGAAGGAGACTGTGGGCTCCAAGACTaGTCACCTCCCTGTCCACGGCCCCGCCCTGGCCACATGCACGGA +
Preference number: 2 (lower is better)
Translates to: GGRHTCSEGDCGLQD*SPPCPRPRPGHMHG
Trigger: TCCGTGCATGTGGCCAGGGCGGGGCCGTGGACAGGGAGGTGACAAGTCTTGGAGCCCACAGTCTCCTTCACTGCACGTGTGTCTTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR-3UTR TCA 90 bp ACAAGGGACGTCCCTGGGTACCACAGATGTGCCCTGGTTCCTCCGTGCCCACCACCAGTCAGCATCGGGTaGCCCAGGAAACCCTGCGTC +
Preference number: 2 (lower is better)
Translates to: TRDVPGYHRCALVPPCPPPVSIG*PRKPCV
Trigger: GACGCAGGGTTTCCTGGGTCACCCGATGCTGACTGG...TGGTGGGCACGGAGGAACCAGGGCACATCTGTGGTACCCAGGGACGTCCCTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR-3UTR CCA 90 bp GTGCCCTGGTTCCTCCGTGCCCACCAGCAGCCGGGAGAGGCGAAGGCACTGGCCCACATAACCACACAATaGAAGCCTTGCAGCCACCTA +
Preference number: 2 (lower is better)
Translates to: VPWFLRAHQQPGEAKALAHITTQ*KPCSHL
Trigger: TAGGTGGCTGCAAGGCTTCCATTGTGTGGTTATGTG...GGCCAGTGCCTTCGCCTCTCCCGGCTGCTGGTGGGCACGGAGGAACCAGGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR-3UTR TCA 90 bp GGGCCTGCACTCTCCCTCTGGAGGGCTCACAGGTGTGTCCCACCGGACGTGCAGGGATTCCTGAACCCCTaGGAACCTCCTTCTAGAACT +
Preference number: 2 (lower is better)
Translates to: GPALSLWRAHRCVPPDVQGFLNP*EPPSRT
Trigger: AGTTCTAGAAGGAGGTTCTCAGGGGTTCAGGAATCC...CTGCACGTCCGGTGGGACACACCTGTGAGCCCTCCAGAGGGAGAGTGCAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR-3UTR CCA 90 bp GTAGCCACAGCCTATTTACACACGTGGCGTCAAAGCCACGGCCGTCAATCACTGCTGCTCTCCGCGGGGTaGGAACTGGATGGCGGCAGG +
Preference number: 2 (lower is better)
Translates to: VATAYLHTWRQSHGRQSLLLSAG*ELDGGR
Trigger: CCTGCCGCCATCCAGTTCCCACCCCGCGGAGAGCAG...CAGTGATTGACGGCCGTGGCTTTGACGCCACGTGTGTAAATAGGCTGTGGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR-3UTR GCA 90 bp CCACATAACCACACAATGGAAGCCTTGCAGCCACCTAACAGCAGGAAAGGCCATCCGGGGTCTGCCCTCTaGACCCGAGCGGACAGCGAG +
Preference number: 2 (lower is better)
Translates to: PHNHTMEALQPPNSRKGHPGSAL*TRADSE
Trigger: CTCGCTGTCCGCTCGGGTGCAGAGGGCAGACCCCGG...ATGGCCTTTCCTGCTGTTAGGTGGCTGCAAGGCTTCCATTGTGTGGTTATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR-3UTR CCA 90 bp CCACATAACCACACAATGGAAGCCTTGCAGCCACCTAACAGCAGGAAAGGCCATCTCCCCACCGGAGCCTaGGAAGCTGGGGTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: PHNHTMEALQPPNSRKGHLPTGA*EAGVSQ
Trigger: CTGGGAGACCCCAGCTTCCCAGGCTCCGGTGGGGAG...ATGGCCTTTCCTGCTGTTAGGTGGCTGCAAGGCTTCCATTGTGTGGTTATGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR-3UTR CCA 90 bp TCCCCAAAATCATTCAAGGACCCACATAACCACACAATGGAAGCCTTGCAGCCAAGGCGCGAGGCAGTGTaGAGGGGCAAAGGGGGACCC +
Preference number: 2 (lower is better)
Translates to: SPKSFKDPHNHTMEALQPRREAV*RGKGGP
Trigger: GGGTCCCCCTTTGCCCCTCCACACTGCCTCGCGCCT...TGGCTGCAAGGCTTCCATTGTGTGGTTATGTGGGTCCTTGAATGATTTTGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR-3UTR GCA 90 bp TCCCCAAAATCATTCAAGGACCCACATAACCACACAATGGAAGCCTTGCAGCCATGCCAAGACCTCCTCTaGTCCGACTGTGGCAGCGGC +
Preference number: 2 (lower is better)
Translates to: SPKSFKDPHNHTMEALQPCQDLL*SDCGSG
Trigger: GCCGCTGCCACAGTCGGAGCAGAGGAGGTCTTGGCA...TGGCTGCAAGGCTTCCATTGTGTGGTTATGTGGGTCCTTGAATGATTTTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR-3UTR CCA 90 bp CCACATAACCACACAATGGAAGCCTTGCAGCCACCTAACAGCAGGAAAGGCCATCAGCGGCGACAGTGTTaGAGGAAAACAGGCCAGGAG +
Preference number: 2 (lower is better)
Translates to: PHNHTMEALQPPNSRKGHQRRQC*RKTGQE
Trigger: CTCCTGGCCTGTTTTCCTCCAACACTGTCGCCGCTG...ATGGCCTTTCCTGCTGTTAGGTGGCTGCAAGGCTTCCATTGTGTGGTTATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR-3UTR GCA 90 bp CTGGAAACCTCCCCAAAATCATTCAAGGACCCACATAACCACACAATGGAAGCCCGTGTCGCTCCCAGCTaGAGACGCTGGACAAAAGGG +
Preference number: 2 (lower is better)
Translates to: LETSPKSFKDPHNHTMEARVAPS*RRWTKG
Trigger: CCCTTTTGTCCAGCGTCTGCAGCTGGGAGCGACACG...GGCTTCCATTGTGTGGTTATGTGGGTCCTTGAATGATTTTGGGGAGGTTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR GCA 72 bp CCCCGCCTCCCCGGCCTGAGGAGCCTCCGCCCTGGGTaGCCTGGCTTCCGGGAGAGAGCGGAGCCCTGCAAC +
Preference number: 3 (lower is better)
Translates to: PRLPGLRSLRPG*PGFRERAEPCN
Trigger: GTTGCAGGGCTCCGCTCTCTCCCGGAAGCCAGGGCACCCAGGGCGGAGGCTCCTCAGGCCGGGGAGGCGGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR CCA 72 bp GCCCAAGCCAGCGGACCCGCCCGCCAGCACCCGGTGTaGAGGAGAGACCGGGGTCTGCCCTCTGCACCCGAG +
Preference number: 3 (lower is better)
Translates to: AQASGPARQHPV*RRDRGLPSAPE
Trigger: CTCGGGTGCAGAGGGCAGACCCCGGTCTCTCCTCCACACCGGGTGCTGGCGGGCGGGTCCGCTGGCTTGGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR GCA 72 bp CCCGCCAGCACCCGGTGTGGAGGAGAGACCGGGGTCTaGCCTCTGCACCCGAGCGGACAGCGAGCAGGTCCC +
Preference number: 3 (lower is better)
Translates to: PASTRCGGETGV*PLHPSGQRAGP
Trigger: GGGACCTGCTCGCTGTCCGCTCGGGTGCAGAGGGCAGACCCCGGTCTCTCCTCCACACCGGGTGCTGGCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR CCA 72 bp CCTCCCCGGCCTGAGGAGCCTCCGCCCTGGGTGCCCTaGCTTCCGGGAGAGAGCGGAGCCCTGCAACACCAG +
Preference number: 3 (lower is better)
Translates to: PPRPEEPPPWVP*LPGESGALQHQ
Trigger: CTGGTGTTGCAGGGCTCCGCTCTCTCCCGGAAGCCAGGGCACCCAGGGCGGAGGCTCCTCAGGCCGGGGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR GCA 72 bp CGTCTCCTCCCCGCGGACCTCTGCCAAGACCTCCTCTaGTCCGACTGTGGCAGCGGCTGCTCCCTCCGCGCC +
Preference number: 3 (lower is better)
Translates to: RLLPADLCQDLL*SDCGSGCSLRA
Trigger: GGCGCGGAGGGAGCAGCCGCTGCCACAGTCGGAGCAGAGGAGGTCTTGGCAGAGGTCCGCGGGGAGGAGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR CCA 72 bp GTGGCCGCGAGGCCCTGCTCTCCGCGGGGTGGGAACTaGATGGCGGCAGGCTGTGGGGGAGGAAGACACACG +
Preference number: 3 (lower is better)
Translates to: VAARPCSPRGGN*MAAGCGGGRHT
Trigger: CGTGTGTCTTCCTCCCCCACAGCCTGCCGCCATCCAGTTCCCACCCCGCGGAGAGCAGGGCCTCGCGGCCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR CCA 72 bp CCGCGAGGCCCTGCTCTCCGCGGGGTGGGAACTGGATaGCGGCAGGCTGTGGGGGAGGAAGACACACGTGCA +
Preference number: 3 (lower is better)
Translates to: PRGPALRGVGTG*RQAVGEEDTRA
Trigger: TGCACGTGTGTCTTCCTCCCCCACAGCCTGCCGCCATCCAGTTCCCACCCCGCGGAGAGCAGGGCCTCGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR GCA 72 bp ACAGGCCAGGAGAGCCGTCTCCTCCCCGCGGACCTCTaGCAAGACCTCCTCTGCTCCGACTGTGGCAGCGGC +
Preference number: 3 (lower is better)
Translates to: TGQESRLLPADL*QDLLCSDCGSG
Trigger: GCCGCTGCCACAGTCGGAGCAGAGGAGGTCTTGGCAGAGGTCCGCGGGGAGGAGACGGCTCTCCTGGCCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR GCA 72 bp GTCCCTGGGTACCACAGATGTGCCCTGGTTCCTCCGTaGCCACCAGCAGCCGGGAGAGGCGAAGGCACTGGC +
Preference number: 3 (lower is better)
Translates to: VPGYHRCALVPP*PPAAGRGEGTG
Trigger: GCCAGTGCCTTCGCCTCTCCCGGCTGCTGGTGGGCACGGAGGAACCAGGGCACATCTGTGGTACCCAGGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR GCA 72 bp AGCCACGGCCGTCAATCACTGCGTGTCGCTCCCAGCTaGAGACGCTGGACAAAAGGGCGACGGGGTGGCAGC +
Preference number: 3 (lower is better)
Translates to: SHGRQSLRVAPS*RRWTKGRRGGS
Trigger: GCTGCCACCCCGTCGCCCTTTTGTCCAGCGTCTGCAGCTGGGAGCGACACGCAGTGATTGACGGCCGTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR GCA 72 bp GAGCGGAGCCCTGCAACACCAGGCTCAGAAGGGGCCTaGACTCTCCCTCTGGAGGGCTCACAGGTGTGTCCC +
Preference number: 3 (lower is better)
Translates to: ERSPATPGSEGA*TLPLEGSQVCP
Trigger: GGGACACACCTGTGAGCCCTCCAGAGGGAGAGTGCAGGCCCCTTCTGAGCCTGGTGTTGCAGGGCTCCGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR TCA 72 bp GACGGATGGGCCATAGGGCTGCTCTCTGGGCATCTCTaGGCAAGACCCTCCGGCGCCACAGCAGAAATGGCC +
Preference number: 3 (lower is better)
Translates to: DGWAIGLLSGHL*ARPSGATAEMA
Trigger: GGCCATTTCTGCTGTGGCGCCGGAGGGTCTTGCTCAGAGATGCCCAGAGAGCAGCCCTATGGCCCATCCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR CCA 72 bp CCAAGACTTGTCACCTCCCTGTCCACGGCCCCGCCCTaGCCACATGCACGGATTCCTGAACCCCTGAGAACC +
Preference number: 3 (lower is better)
Translates to: PRLVTSLSTAPP*PHARIPEPLRT
Trigger: GGTTCTCAGGGGTTCAGGAATCCGTGCATGTGGCCAGGGCGGGGCCGTGGACAGGGAGGTGACAAGTCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR TCA 72 bp GGCGGCAGGCTGTGGGGGAGGAAGACACACGTGCAGTaGAGGAGACTGTGGGCTCCAAGACTTGTCACCTCC +
Preference number: 3 (lower is better)
Translates to: GGRLWGRKTHVQ*RRLWAPRLVTS
Trigger: GGAGGTGACAAGTCTTGGAGCCCACAGTCTCCTTCACTGCACGTGTGTCTTCCTCCCCCACAGCCTGCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR TCA 72 bp CCCCGCCCTGGCCACATGCACGGATTCCTGAACCCCTaGGAACCTCCTTCTAGAACTCTGCGTGAAAGGCGC +
Preference number: 3 (lower is better)
Translates to: PRPGHMHGFLNP*EPPSRTLRERR
Trigger: GCGCCTTTCACGCAGAGTTCTAGAAGGAGGTTCTCAGGGGTTCAGGAATCCGTGCATGTGGCCAGGGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR CCA 72 bp ACAATGTGTGGCAAACGGGCTGACAAGGGACGTCCCTaGGTACCACAGATGTGCCCTGGTTCCTCCGTGCCC +
Preference number: 3 (lower is better)
Translates to: TMCGKRADKGRP*VPQMCPGSSVP
Trigger: GGGCACGGAGGAACCAGGGCACATCTGTGGTACCCAGGGACGTCCCTTGTCAGCCCGTTTGCCACACATTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR GCA 72 bp TACACACGTGGCGTCAAAGCCACGGCCGTCAATCACTaGGTGTCGCTCCCAGCTGCAGACGCTGGACAAAAG +
Preference number: 3 (lower is better)
Translates to: YTRGVKATAVNH*VSLPAADAGQK
Trigger: CTTTTGTCCAGCGTCTGCAGCTGGGAGCGACACGCAGTGATTGACGGCCGTGGCTTTGACGCCACGTGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR CCA 72 bp GACCCACCCACCGTAGCCACAGCCTATTTACACACGTaGCGTCAAAGCCACGGCCGTCAATCACTGCGTGTC +
Preference number: 3 (lower is better)
Translates to: DPPTVATAYLHT*RQSHGRQSLRV
Trigger: GACACGCAGTGATTGACGGCCGTGGCTTTGACGCCACGTGTGTAAATAGGCTGTGGCTACGGTGGGTGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR-3UTR CAA 90 bp CTGTACCCAAAAAGCCAGCGGCGACAGTGTTGGAGGAAAACAGGCCAGGAGAGCTGTGGGCTCCAAGACTaGTCACCTCCCTGTCCACGG +
Preference number: 3 (lower is better)
Translates to: LYPKSQRRQCWRKTGQESCGLQD*SPPCPR
Trigger: CCGTGGACAGGGAGGTGACAAGTCTTGGAGCCCACA...GCTCTCCTGGCCTGTTTTCCTCCAACACTGTCGCCGCTGGCTTTTTGGGTACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR GCA 72 bp CATTCAAGGACCCACATAACCACACAATGGAAGCCTTaGAGCCACCTAACAGCAGGAAAGGCCATAGCCAGG +
Preference number: 3 (lower is better)
Translates to: HSRTHITTQWKP*SHLTAGKAIAR
Trigger: CCTGGCTATGGCCTTTCCTGCTGTTAGGTGGCTGCAAGGCTTCCATTGTGTGGTTATGTGGGTCCTTGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR CCA 72 bp CCCCAAAATCATTCAAGGACCCACATAACCACACAATaGAAGCCTTGCAGCCACCTAACAGCAGGAAAGGCC +
Preference number: 3 (lower is better)
Translates to: PQNHSRTHITTQ*KPCSHLTAGKA
Trigger: GGCCTTTCCTGCTGTTAGGTGGCTGCAAGGCTTCCATTGTGTGGTTATGTGGGTCCTTGAATGATTTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp GCAGAGCCTGGGCCTGGTGTGGCCGCGAGGCCCTGCTCTCCGCGGGGTGGGAACCCTGGGGAGCCCACCTaGGCCAGAGCCCCGTGCTCA +
Preference number: 4 (lower is better)
Translates to: AEPGPGVAARPCSPRGGNPGEPT*ARAPCS
Trigger: TGAGCACGGGGCTCTGGCCCAGGTGGGCTCCCCAGG...GTTCCCACCCCGCGGAGAGCAGGGCCTCGCGGCCACACCAGGCCCAGGCTCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp TGGCCGCGAGGCCCTGCTCTCCGCGGGGTGGGAACTGGATGGCGGCAGGCTGTGGGCTGGCGTCCGGGGTaGTGTCGTCCGCAGACAGGG +
Preference number: 4 (lower is better)
Translates to: WPRGPALRGVGTGWRQAVGWRPG*CRPQTG
Trigger: CCCTGTCTGCGGACGACAGCACCCCGGACGCCAGCC...CACAGCCTGCCGCCATCCAGTTCCCACCCCGCGGAGAGCAGGGCCTCGCGGCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp CCGCCAGCACCCGGTGTGGAGGAGAGACCGGGGTCTGCCCTCTGCACCCGAGCGGACTGTGGCAGCGGCTaGTCCCTCCGCGCCCACCCT +
Preference number: 4 (lower is better)
Translates to: PPAPGVEERPGSALCTRADCGSG*SLRAHP
Trigger: AGGGTGGGCGCGGAGGGAGCAGCCGCTGCCACAGTC...CGCTCGGGTGCAGAGGGCAGACCCCGGTCTCTCCTCCACACCGGGTGCTGGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp GCAGAGCCTGGGCCTGGTGTGGCCGCGAGGCCCTGCTCTCCGCGGGGTGGGAACCGCCAGCACCCGGTGTaGAGGAGAGACCGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: AEPGPGVAARPCSPRGGNRQHPV*RRDRGL
Trigger: CAGACCCCGGTCTCTCCTCCACACCGGGTGCTGGCG...GTTCCCACCCCGCGGAGAGCAGGGCCTCGCGGCCACACCAGGCCCAGGCTCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp CGCCAGCACCCGGTGTGGAGGAGAGACCGGGGTCTGCCCTCTGCACCCGAGCGGCCGCCCTGGGTGCCCTaGCTTCCGGGAGAGAGCGGA +
Preference number: 4 (lower is better)
Translates to: RQHPVWRRDRGLPSAPERPPWVP*LPGESG
Trigger: TCCGCTCTCTCCCGGAAGCCAGGGCACCCAGGGCGG...CCGCTCGGGTGCAGAGGGCAGACCCCGGTCTCTCCTCCACACCGGGTGCTGGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp CCAGCGGACCCGCCCGCCAGCACCCGGTGTGGAGGAGAGACCGGGGTCTGCCCTGCTCTTGCTCTCGGCTaGCAGCTTGGCAGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PADPPASTRCGGETGVCPALALG*QLGRQP
Trigger: CGGCTGCCTGCCAAGCTGGCAGCCGAGAGCAAGAGC...AGGGCAGACCCCGGTCTCTCCTCCACACCGGGTGCTGGCGGGCGGGTCCGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp GTGCCCTGGTTCCTCCGTGCCCACCAGCAGCCGGGAGAGGCGAAGGCACTGGCCCCAGTTTCCGGACGCTaGCGGGCCCCAGGCCGTCGA +
Preference number: 4 (lower is better)
Translates to: VPWFLRAHQQPGEAKALAPVSGR*RAPGRR
Trigger: TCGACGGCCTGGGGCCCGCCAGCGTCCGGAAACTGG...GGCCAGTGCCTTCGCCTCTCCCGGCTGCTGGTGGGCACGGAGGAACCAGGGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp TGGCCGCGAGGCCCTGCTCTCCGCGGGGTGGGAACTGGATGGCGGCAGGCTGTGAGGCGCGAGGCAGTGTaGAGGGGCAAAGGGGGACCC +
Preference number: 4 (lower is better)
Translates to: WPRGPALRGVGTGWRQAVRREAV*RGKGGP
Trigger: GGGTCCCCCTTTGCCCCTCCACACTGCCTCGCGCCT...CACAGCCTGCCGCCATCCAGTTCCCACCCCGCGGAGAGCAGGGCCTCGCGGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp GGTGTGGCCGCGAGGCCCTGCTCTCCGCGGGGTGGGAACTGGATGGCGGCAGGCGCGAAGGCACTGGCCTaGCCTGGCCCCTGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: GVAARPCSPRGGNWMAAGAKALA*PGPCFE
Trigger: CTCAAAGCAGGGGCCAGGCCAGGCCAGTGCCTTCGC...GCCTGCCGCCATCCAGTTCCCACCCCGCGGAGAGCAGGGCCTCGCGGCCACACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR TCA 90 bp GTGCCCTGGTTCCTCCGTGCCCACCAGCAGCCGGGAGAGGCGAAGGCACTGGCCGGCCCACGCAGCAGTTaGTGCTGCGGGCGTCGCACA +
Preference number: 4 (lower is better)
Translates to: VPWFLRAHQQPGEAKALAGPRSS*CCGRRT
Trigger: TGTGCGACGCCCGCAGCATCAACTGCTGCGTGGGCC...GGCCAGTGCCTTCGCCTCTCCCGGCTGCTGGTGGGCACGGAGGAACCAGGGCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp GTGCCCTGGTTCCTCCGTGCCCACCAGCAGCCGGGAGAGGCGAAGGCACTGGCCTGGCGGCCCACGGAGTaGCGGAGCTGGCTCACCTTG +
Preference number: 4 (lower is better)
Translates to: VPWFLRAHQQPGEAKALAWRPTE*RSWLTL
Trigger: CAAGGTGAGCCAGCTCCGGCACTCCGTGGGCCGCCA...GGCCAGTGCCTTCGCCTCTCCCGGCTGCTGGTGGGCACGGAGGAACCAGGGCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp CCGCCAGCACCCGGTGTGGAGGAGAGACCGGGGTCTGCCCTCTGCACCCGAGCGCAAAGGGGGACCCTCTaGCCCGCGAAGTGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: PPAPGVEERPGSALCTRAQRGTL*PAKWPL
Trigger: AAGGGGCCACTTCGCGGGGCAGAGGGTCCCCCTTTG...CGCTCGGGTGCAGAGGGCAGACCCCGGTCTCTCCTCCACACCGGGTGCTGGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp CCCTGGTTCCTCCGTGCCCACCAGCAGCCGGGAGAGGCGAAGGCACTGGCCTGGGTGTCCCACCGGACGTaGAGCAGGGGCCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PWFLRAHQQPGEAKALAWVSHRT*SRGPAA
Trigger: AGCAGCTGGGCCCCTGCTGCACGTCCGGTGGGACAC...CCAGGCCAGTGCCTTCGCCTCTCCCGGCTGCTGGTGGGCACGGAGGAACCAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp TGGCCGCGAGGCCCTGCTCTCCGCGGGGTGGGAACTGGATGGCGGCAGGCTGTGACGGAGTGCCGGAGCTaGCTCACCTTGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: WPRGPALRGVGTGWRQAVTECRS*LTLAWL
Trigger: CAGCCAGGCCAAGGTGAGCCAGCTCCGGCACTCCGT...CACAGCCTGCCGCCATCCAGTTCCCACCCCGCGGAGAGCAGGGCCTCGCGGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp TGGGCCTGGTGTGGCCGCGAGGCCCTGCTCTCCGCGGGGTGGGAACTGGATGGCTCCACGGCCCCGCCCTaGCCACATGCACGGATTCCT +
Preference number: 4 (lower is better)
Translates to: WAWCGREALLSAGWELDGSTAPP*PHARIP
Trigger: AGGAATCCGTGCATGTGGCCAGGGCGGGGCCGTGGA...GCCATCCAGTTCCCACCCCGCGGAGAGCAGGGCCTCGCGGCCACACCAGGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR TCA 90 bp CGCCAGCACCCGGTGTGGAGGAGAGACCGGGGTCTGCCCTCTGCACCCGAGCGGGCAGCGTGTCCCGCTTaGGGCTGCTGCCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: RQHPVWRRDRGLPSAPERAACPA*GCCPCS
Trigger: TGAACAAGGGCAGCAGCCTCAAGCGGGACACGCTGC...CCGCTCGGGTGCAGAGGGCAGACCCCGGTCTCTCCTCCACACCGGGTGCTGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp GGTGTGGCCGCGAGGCCCTGCTCTCCGCGGGGTGGGAACTGGATGGCGGCAGGCTGGGCCAGAGCCCCGTaGTCACTGTGGAACAGAGAC +
Preference number: 4 (lower is better)
Translates to: GVAARPCSPRGGNWMAAGWARAP*SLWNRD
Trigger: GTCTCTGTTCCACAGTGAGCACGGGGCTCTGGCCCA...GCCTGCCGCCATCCAGTTCCCACCCCGCGGAGAGCAGGGCCTCGCGGCCACACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp GCAGAGCCTGGGCCTGGTGTGGCCGCGAGGCCCTGCTCTCCGCGGGGTGGGAACACGGCCGTCAATCACTaGGTGTCGCTCCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: AEPGPGVAARPCSPRGGNTAVNH*VSLPAA
Trigger: TGCAGCTGGGAGCGACACGCAGTGATTGACGGCCGT...GTTCCCACCCCGCGGAGAGCAGGGCCTCGCGGCCACACCAGGCCCAGGCTCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp ACCCGGTGTGGAGGAGAGACCGGGGTCTGCCCTCTGCACCCGAGCGGACAGCGAGGTTCTGTTCCGACGTaGAGGGGCCCAGCGCGGCCT +
Preference number: 4 (lower is better)
Translates to: TRCGGETGVCPLHPSGQRGSVPT*RGPARP
Trigger: AGGCCGCGCTGGGCCCCTCCACGTCGGAACAGAACC...TCGCTGTCCGCTCGGGTGCAGAGGGCAGACCCCGGTCTCTCCTCCACACCGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp TGGCCGCGAGGCCCTGCTCTCCGCGGGGTGGGAACTGGATGGCGGCAGGCTGTGTCCTTGCGCCTCGTGTaGGGGCTCTCAGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: WPRGPALRGVGTGWRQAVSLRLV*GLSASM
Trigger: CATGCTGGCTGAGAGCCCCCACACGAGGCGCAAGGA...CACAGCCTGCCGCCATCCAGTTCCCACCCCGCGGAGAGCAGGGCCTCGCGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp AAGGGGCCTGCACTCTCCCTCTGGAGGGCTCACAGGTGTGTCCCACCGGACGTGCCCCGAGGGCCCACGTaGACCGTGTGCTCCCCACGC +
Preference number: 4 (lower is better)
Translates to: KGPALSLWRAHRCVPPDVPRGPT*TVCSPR
Trigger: GCGTGGGGAGCACACGGTCCACGTGGGCCCTCGGGG...CACGTCCGGTGGGACACACCTGTGAGCCCTCCAGAGGGAGAGTGCAGGCCCCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp TGGGCCTGGTGTGGCCGCGAGGCCCTGCTCTCCGCGGGGTGGGAACTGGATGGCGATGGCGGCAGGCTGTaGGGGAGGAAGACACACGTG +
Preference number: 4 (lower is better)
Translates to: WAWCGREALLSAGWELDGDGGRL*GRKTHV
Trigger: CACGTGTGTCTTCCTCCCCCACAGCCTGCCGCCATC...GCCATCCAGTTCCCACCCCGCGGAGAGCAGGGCCTCGCGGCCACACCAGGCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp CTGTCCACGGCCCCGCCCTGGCCACATGCACGGATTCCTGAACCCCTGAGAACCCCCCCAGCTGCCTCCTaGGCTCCGACCCACCCACCG +
Preference number: 4 (lower is better)
Translates to: LSTAPPWPHARIPEPLRTPPAAS*APTHPP
Trigger: CGGTGGGTGGGTCGGAGCCCAGGAGGCAGCTGGGGG...GGTTCTCAGGGGTTCAGGAATCCGTGCATGTGGCCAGGGCGGGGCCGTGGACAG
70% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR TCA 90 bp GTGCCCTGGTTCCTCCGTGCCCACCAGCAGCCGGGAGAGGCGAAGGCACTGGCCGTGTGGCAAACGGGCTaGCAAGGGACGTCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VPWFLRAHQQPGEAKALAVWQTG*QGTSLG
Trigger: ACCCAGGGACGTCCCTTGTCAGCCCGTTTGCCACAC...GGCCAGTGCCTTCGCCTCTCCCGGCTGCTGGTGGGCACGGAGGAACCAGGGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp CAGCATCGGGTGACCCAGGAAACCCTGCGTCAGCTACAGCATCAGCGCCCAGCCCCCACGTGGACCGTGTaGTCCCCACGCGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: QHRVTQETLRQLQHQRPAPTWTV*SPRAWP
Trigger: GGGCCAGGCGCGTGGGGAGCACACGGTCCACGTGGG...GGCTGGGCGCTGATGCTGTAGCTGACGCAGGGTTTCCTGGGTCACCCGATGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp CTGTCCACGGCCCCGCCCTGGCCACATGCACGGATTCCTGAACCCCTGAGAACCCCGGGGTCTGCCCTCTaGACCCGAGCGGACAGCGAG +
Preference number: 4 (lower is better)
Translates to: LSTAPPWPHARIPEPLRTPGSAL*TRADSE
Trigger: CTCGCTGTCCGCTCGGGTGCAGAGGGCAGACCCCGG...GGTTCTCAGGGGTTCAGGAATCCGTGCATGTGGCCAGGGCGGGGCCGTGGACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp GATGTGCCCTGGTTCCTCCGTGCCCACCAGCAGCCGGGAGAGGCGAAGGCACTGGGAGAGACCGGGGTCTaGCCTCTGCACCCGAGCGGA +
Preference number: 4 (lower is better)
Translates to: DVPWFLRAHQQPGEAKALGETGV*PLHPSG
Trigger: TCCGCTCGGGTGCAGAGGGCAGACCCCGGTCTCTCC...CAGTGCCTTCGCCTCTCCCGGCTGCTGGTGGGCACGGAGGAACCAGGGCACATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp GGAGGGCTCACAGGTGTGTCCCACCGGACGTGCAGCAGGGGCCCAGCTGCTCCTGGCTCAGAAGGGGCCTaGACTCTCCCTCTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GGLTGVSHRTCSRGPAAPGSEGA*TLPLEG
Trigger: GCCCTCCAGAGGGAGAGTGCAGGCCCCTTCTGAGCC...AGGAGCAGCTGGGCCCCTGCTGCACGTCCGGTGGGACACACCTGTGAGCCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp TGGCCGCGAGGCCCTGCTCTCCGCGGGGTGGGAACTGGATGGCGGCAGGCTGTGGAGAGAGCGGAGCCCTaGAACACCAGGCTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: WPRGPALRGVGTGWRQAVERAEP*NTRLRR
Trigger: CCTTCTGAGCCTGGTGTTGCAGGGCTCCGCTCTCTC...CACAGCCTGCCGCCATCCAGTTCCCACCCCGCGGAGAGCAGGGCCTCGCGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp GATGTGCCCTGGTTCCTCCGTGCCCACCAGCAGCCGGGAGAGGCGAAGGCACTGGGGGGTCGGCGTCAGTaGCCTCCTCGGACAGCCAGT +
Preference number: 4 (lower is better)
Translates to: DVPWFLRAHQQPGEAKALGGRRQ*PPRTAS
Trigger: ACTGGCTGTCCGAGGAGGCCACTGACGCCGACCCCC...CAGTGCCTTCGCCTCTCCCGGCTGCTGGTGGGCACGGAGGAACCAGGGCACATC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp CTGTCCACGGCCCCGCCCTGGCCACATGCACGGATTCCTGAACCCCTGAGAACCAGCCTGGGCCTGGTGTaGCCGCGAGGCCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LSTAPPWPHARIPEPLRTSLGLV*PRGPAL
Trigger: GAGAGCAGGGCCTCGCGGCCACACCAGGCCCAGGCT...GGTTCTCAGGGGTTCAGGAATCCGTGCATGTGGCCAGGGCGGGGCCGTGGACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp GTGCCCTGGTTCCTCCGTGCCCACCAGCAGCCGGGAGAGGCGAAGGCACTGGCCCCCAGCGAGGACGGATaGGCCATAGGGCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: VPWFLRAHQQPGEAKALAPSEDG*AIGLLS
Trigger: AGAGAGCAGCCCTATGGCCCATCCGTCCTCGCTGGG...GGCCAGTGCCTTCGCCTCTCCCGGCTGCTGGTGGGCACGGAGGAACCAGGGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp CCCTGGTTCCTCCGTGCCCACCAGCAGCCGGGAGAGGCGAAGGCACTGGCCTGGCCCAGCTGCAGACGCTaGACAAAAGGGCGACGGGGT +
Preference number: 4 (lower is better)
Translates to: PWFLRAHQQPGEAKALAWPSCRR*TKGRRG
Trigger: ACCCCGTCGCCCTTTTGTCCAGCGTCTGCAGCTGGG...CCAGGCCAGTGCCTTCGCCTCTCCCGGCTGCTGGTGGGCACGGAGGAACCAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR TCA 90 bp ACAAGGGACGTCCCTGGGTACCACAGATGTGCCCTGGTTCCTCCGTGCCCACCAAGCGTCTGCCCGGGGTaGTGGCCCGAGGCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: TRDVPGYHRCALVPPCPPSVCPG*WPEAGG
Trigger: ACCTCCGGCCTCGGGCCATCACCCCGGGCAGACGCT...TGGTGGGCACGGAGGAACCAGGGCACATCTGTGGTACCCAGGGACGTCCCTTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp TCTCCTCCCCGCGGACCTCTGCCAAGACCTCCTCTGCTCCGACTGTGGCAGCGGAGGACGTCTGGGCCTTaGGCACCGAGGGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: SPPRGPLPRPPLLRLWQRRTSGP*APRAGT
Trigger: TGTCCCTGCCCTCGGTGCCCAAGGCCCAGACGTCCT...CCGCTGCCACAGTCGGAGCAGAGGAGGTCTTGGCAGAGGTCCGCGGGGAGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp CTGAGCAAGACCCTCCGGCGCCACAGCAGAAATGGCCAGACGGGCCTGTACCCACCCCATCACCCCCGTTaGCCTTGGCAGCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: LSKTLRRHSRNGQTGLYPPHHPR*PWQLPG
Trigger: GCCGGGCAGCTGCCAAGGCCAACGGGGGTGATGGGG...TGGGTACAGGCCCGTCTGGCCATTTCTGCTGTGGCGCCGGAGGGTCTTGCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp CGCCACAGCAGAAATGGCCAGACGGGCCTGTACCCAAAAAGCCAGCGGCGACAGTGCTCCCCACGCGCCTaGCCCGACTCGGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RHSRNGQTGLYPKSQRRQCSPRA*PDSGPG
Trigger: ACCTGGCCCCGAGTCGGGCCAGGCGCGTGGGGAGCA...CTGTCGCCGCTGGCTTTTTGGGTACAGGCCCGTCTGGCCATTTCTGCTGTGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp AAGGGGCCTGCACTCTCCCTCTGGAGGGCTCACAGGTGTGTCCCACCGGACGTGCTGCTCTCCGCGGGGTaGGAACTGGATGGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: KGPALSLWRAHRCVPPDVLLSAG*ELDGGR
Trigger: CCTGCCGCCATCCAGTTCCCACCCCGCGGAGAGCAG...CACGTCCGGTGGGACACACCTGTGAGCCCTCCAGAGGGAGAGTGCAGGCCCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp CGCCACAGCAGAAATGGCCAGACGGGCCTGTACCCAAAAAGCCAGCGGCGACAGGGCAGAGCCTGGGCCTaGTGTGGCCGCGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RHSRNGQTGLYPKSQRRQGRAWA*CGREAL
Trigger: CAGGGCCTCGCGGCCACACCAGGCCCAGGCTCTGCC...CTGTCGCCGCTGGCTTTTTGGGTACAGGCCCGTCTGGCCATTTCTGCTGTGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp GTGCCCTGGTTCCTCCGTGCCCACCAGCAGCCGGGAGAGGCGAAGGCACTGGCCCCTGCACTCTCCCTCTaGAGGGCTCACAGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: VPWFLRAHQQPGEAKALAPALSL*RAHRCV
Trigger: GACACACCTGTGAGCCCTCCAGAGGGAGAGTGCAGG...GGCCAGTGCCTTCGCCTCTCCCGGCTGCTGGTGGGCACGGAGGAACCAGGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp TGGGCCTGGTGTGGCCGCGAGGCCCTGCTCTCCGCGGGGTGGGAACTGGATGGCCTCCTTCTAGAACTCTaGGTGAAAGGCGCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: WAWCGREALLSAGWELDGLLLEL*VKGARQ
Trigger: CTGCCTCGCGCCTTTCACGCAGAGTTCTAGAAGGAG...GCCATCCAGTTCCCACCCCGCGGAGAGCAGGGCCTCGCGGCCACACCAGGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp CTGTCCACGGCCCCGCCCTGGCCACATGCACGGATTCCTGAACCCCTGAGAACCCTCCCCGCGGACCTCTaGCAAGACCTCCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LSTAPPWPHARIPEPLRTLPADL*QDLLCS
Trigger: GGAGCAGAGGAGGTCTTGGCAGAGGTCCGCGGGGAG...GGTTCTCAGGGGTTCAGGAATCCGTGCATGTGGCCAGGGCGGGGCCGTGGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp GGAGGGCTCACAGGTGTGTCCCACCGGACGTGCAGCAGGGGCCCAGCTGCTCCTCGTGTCGCTCCCAGCTaGAGACGCTGGACAAAAGGG +
Preference number: 4 (lower is better)
Translates to: GGLTGVSHRTCSRGPAAPRVAPS*RRWTKG
Trigger: CCCTTTTGTCCAGCGTCTGCAGCTGGGAGCGACACG...AGGAGCAGCTGGGCCCCTGCTGCACGTCCGGTGGGACACACCTGTGAGCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp ACAAGGGACGTCCCTGGGTACCACAGATGTGCCCTGGTTCCTCCGTGCCCACCACCGAGGGCAGGGACATaGCACCCTGGGCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: TRDVPGYHRCALVPPCPPPRAGT*HPGPGG
Trigger: ACCCCCAGGCCCAGGGTGCCATGTCCCTGCCCTCGG...TGGTGGGCACGGAGGAACCAGGGCACATCTGTGGTACCCAGGGACGTCCCTTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp ACCCGGTGTGGAGGAGAGACCGGGGTCTGCCCTCTGCACCCGAGCGGACAGCGAGCCCCGTGCTCACTGTaGAACAGAGACTCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: TRCGGETGVCPLHPSGQRAPCSL*NRDSLR
Trigger: GCGCAAGGAGTCTCTGTTCCACAGTGAGCACGGGGC...TCGCTGTCCGCTCGGGTGCAGAGGGCAGACCCCGGTCTCTCCTCCACACCGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp ACAAGGGACGTCCCTGGGTACCACAGATGTGCCCTGGTTCCTCCGTGCCCACCACCGCGGGGTGGGAACTaGATGGCGGCAGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: TRDVPGYHRCALVPPCPPPRGGN*MAAGCG
Trigger: CCCACAGCCTGCCGCCATCCAGTTCCCACCCCGCGG...TGGTGGGCACGGAGGAACCAGGGCACATCTGTGGTACCCAGGGACGTCCCTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp CTGTCCACGGCCCCGCCCTGGCCACATGCACGGATTCCTGAACCCCTGAGAACCTGCCAAGACCTCCTCTaGTCCGACTGTGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: LSTAPPWPHARIPEPLRTCQDLL*SDCGSG
Trigger: GCCGCTGCCACAGTCGGAGCAGAGGAGGTCTTGGCA...GGTTCTCAGGGGTTCAGGAATCCGTGCATGTGGCCAGGGCGGGGCCGTGGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp TCTCCTCCCCGCGGACCTCTGCCAAGACCTCCTCTGCTCCGACTGTGGCAGCGGTGGGTACCACAGATGTaGCCTGGTTCCTCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: SPPRGPLPRPPLLRLWQRWVPQM*PGSSVP
Trigger: GGGCACGGAGGAACCAGGGCACATCTGTGGTACCCA...CCGCTGCCACAGTCGGAGCAGAGGAGGTCTTGGCAGAGGTCCGCGGGGAGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp GGGCCTGCACTCTCCCTCTGGAGGGCTCACAGGTGTGTCCCACCGGACGTGCAGTCGGCACTCTCGATCTaGATCACGTGCCGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GPALSLWRAHRCVPPDVQSALSI*ITCRVA
Trigger: AGCCACCCGGCACGTGATCCAGATCGAGAGTGCCGA...CTGCACGTCCGGTGGGACACACCTGTGAGCCCTCCAGAGGGAGAGTGCAGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR CAA 72 bp CACACGTGCAGTGAAGGAGACTGTGGGCTCCAAGACTaGTCACCTCCCTGTCCACGGCCCCGCCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: HTCSEGDCGLQD*SPPCPRPRPGH
Trigger: GTGGCCAGGGCGGGGCCGTGGACAGGGAGGTGACAAGTCTTGGAGCCCACAGTCTCCTTCACTGCACGTGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR TCA 90 bp CCGCCAGCACCCGGTGTGGAGGAGAGACCGGGGTCTGCCCTCTGCACCCGAGCGGGATTCCTGAACCCCTaGGAACCTCCTTCTAGAACT +
Preference number: 4 (lower is better)
Translates to: PPAPGVEERPGSALCTRAGFLNP*EPPSRT
Trigger: AGTTCTAGAAGGAGGTTCTCAGGGGTTCAGGAATCC...CGCTCGGGTGCAGAGGGCAGACCCCGGTCTCTCCTCCACACCGGGTGCTGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp CGCCACAGCAGAAATGGCCAGACGGGCCTGTACCCAAAAAGCCAGCGGCGACAGGTGCTGCGCTGCTTCTaGAGCTTGCCCGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: RHSRNGQTGLYPKSQRRQVLRCF*SLPGTR
Trigger: CCTGGTGCCGGGCAAGCTGCAGAAGCAGCGCAGCAC...CTGTCGCCGCTGGCTTTTTGGGTACAGGCCCGTCTGGCCATTTCTGCTGTGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp ACCCGGTGTGGAGGAGAGACCGGGGTCTGCCCTCTGCACCCGAGCGGACAGCGATCTTCACGATGGTGCTaGGCTGCTTCTGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: TRCGGETGVCPLHPSGQRSSRWC*AASAAC
Trigger: GCAAGCTGCAGAAGCAGCGCAGCACCATCGTGAAGA...TCGCTGTCCGCTCGGGTGCAGAGGGCAGACCCCGGTCTCTCCTCCACACCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR TCA 90 bp GGTGTGGCCGCGAGGCCCTGCTCTCCGCGGGGTGGGAACTGGATGGCGGCAGGCATTTCTGCATCATTCTaGGCTGGAAACCTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: GVAARPCSPRGGNWMAAGISASF*AGNLPK
Trigger: TTTGGGGAGGTTTCCAGCTCAGAATGATGCAGAAAT...GCCTGCCGCCATCCAGTTCCCACCCCGCGGAGAGCAGGGCCTCGCGGCCACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp GCGTCAAAGCCACGGCCGTCAATCACTGCGTGTCGCTCCCAGCTGCAGACGCTGCGGGCGTCAACACATTaGTGTACAGGGGCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: ASKPRPSITACRSQLQTLRASTH*CTGAPW
Trigger: CCAAGGGGCCCCTGTACAGCAATGTGTTGACGCCCG...CAGCGTCTGCAGCTGGGAGCGACACGCAGTGATTGACGGCCGTGGCTTTGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp ACAAGGGACGTCCCTGGGTACCACAGATGTGCCCTGGTTCCTCCGTGCCCACCAACGATGGTGCTGCGCTaGTTCTGCAGCTTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: TRDVPGYHRCALVPPCPPTMVLR*FCSLPG
Trigger: GCCGGGCAAGCTGCAGAAGCAGCGCAGCACCATCGT...TGGTGGGCACGGAGGAACCAGGGCACATCTGTGGTACCCAGGGACGTCCCTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp GGAGGGCTCACAGGTGTGTCCCACCGGACGTGCAGCAGGGGCCCAGCTGCTCCTTGTTCTTCACGATGGTaGTGCGCTGCTTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GGLTGVSHRTCSRGPAAPCSSRW*CAASAA
Trigger: AGCTGCAGAAGCAGCGCAGCACCATCGTGAAGAACA...AGGAGCAGCTGGGCCCCTGCTGCACGTCCGGTGGGACACACCTGTGAGCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp ACAAGGGACGTCCCTGGGTACCACAGATGTGCCCTGGTTCCTCCGTGCCCACCAGGATCACGTGCCGGGTaGCTGCCTTCAGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: TRDVPGYHRCALVPPCPPGSRAG*LPSAGS
Trigger: AGAGCCTGCTGAAGGCAGCCACCCGGCACGTGATCC...TGGTGGGCACGGAGGAACCAGGGCACATCTGTGGTACCCAGGGACGTCCCTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp CAAGAGGAACAATGTGTGGCAAACGGGCTGACAAGGGACGTCCCTGGGTACCACATGGCACCCTGGGCCTaGGGGTCGGCGTCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: QEEQCVANGLTRDVPGYHMAPWA*GSASVA
Trigger: GGCCACTGACGCCGACCCCCAGGCCCAGGGTGCCAT...GTGGTACCCAGGGACGTCCCTTGTCAGCCCGTTTGCCACACATTGTTCCTCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR TCA 90 bp AAGGGGCCTGCACTCTCCCTCTGGAGGGCTCACAGGTGTGTCCCACCGGACGTGAAGACACACGTGCAGTaGAGGAGACTGTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: KGPALSLWRAHRCVPPDVKTHVQ*RRLWAP
Trigger: TGGAGCCCACAGTCTCCTTCACTGCACGTGTGTCTT...CACGTCCGGTGGGACACACCTGTGAGCCCTCCAGAGGGAGAGTGCAGGCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp GGGCCTGCACTCTCCCTCTGGAGGGCTCACAGGTGTGTCCCACCGGACGTGCAGGCCTGGCCTGGCCCCTaGTTTGAGTCTTATCATTTC +
Preference number: 4 (lower is better)
Translates to: GPALSLWRAHRCVPPDVQAWPGP*FESYHF
Trigger: GAAATGATAAGACTCAAAGCAGGGGCCAGGCCAGGC...CTGCACGTCCGGTGGGACACACCTGTGAGCCCTCCAGAGGGAGAGTGCAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp GTAGCCACAGCCTATTTACACACGTGGCGTCAAAGCCACGGCCGTCAATCACTGTCTCGGCTGCCAGCTTaGCAGGCAGCCGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: VATAYLHTWRQSHGRQSLSRLPA*QAAGGS
Trigger: GGAGCCCCCGGCTGCCTGCCAAGCTGGCAGCCGAGA...CAGTGATTGACGGCCGTGGCTTTGACGCCACGTGTGTAAATAGGCTGTGGCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp AGATGTGCCCTGGTTCCTCCGTGCCCACCAGCAGCCGGGAGAGGCGAAGGCACTTTGGCCTGGCTGTCCTaGGCGAAACCTTTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: RCALVPPCPPAAGRGEGTLAWLS*AKPLSR
Trigger: TCTGCTCAAAGGTTTCGCCCAGGACAGCCAGGCCAA...AGTGCCTTCGCCTCTCCCGGCTGCTGGTGGGCACGGAGGAACCAGGGCACATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp GATGTGCCCTGGTTCCTCCGTGCCCACCAGCAGCCGGGAGAGGCGAAGGCACTGCCAAGAACCACATGTTaGTTTTTCTCATGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: DVPWFLRAHQQPGEAKALPRTTC*FFSWGR
Trigger: CCGCCCCCATGAGAAAAACCAACATGTGGTTCTTGG...CAGTGCCTTCGCCTCTCCCGGCTGCTGGTGGGCACGGAGGAACCAGGGCACATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp CAAGAGGAACAATGTGTGGCAAACGGGCTGACAAGGGACGTCCCTGGGTACCACGGAGCTGGCTCACCTTaGCCTGGCTGTCCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: QEEQCVANGLTRDVPGYHGAGSP*PGCPGR
Trigger: TCGCCCAGGACAGCCAGGCCAAGGTGAGCCAGCTCC...GTGGTACCCAGGGACGTCCCTTGTCAGCCCGTTTGCCACACATTGTTCCTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp CCACATAACCACACAATGGAAGCCTTGCAGCCACCTAACAGCAGGAAAGGCCATGCAGACAGGGAGCCGTaGCGGCCCACGGAGTGCCGG +
Preference number: 4 (lower is better)
Translates to: PHNHTMEALQPPNSRKGHADREP*RPTECR
Trigger: CCGGCACTCCGTGGGCCGCCACGGCTCCCTGTCTGC...ATGGCCTTTCCTGCTGTTAGGTGGCTGCAAGGCTTCCATTGTGTGGTTATGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp CAGCATCGGGTGACCCAGGAAACCCTGCGTCAGCTACAGCATCAGCGCCCAGCCGCCTATTTACACACGTaGCGTCAAAGCCACGGCCGT +
Preference number: 4 (lower is better)
Translates to: QHRVTQETLRQLQHQRPAAYLHT*RQSHGR
Trigger: ACGGCCGTGGCTTTGACGCCACGTGTGTAAATAGGC...GGCTGGGCGCTGATGCTGTAGCTGACGCAGGGTTTCCTGGGTCACCCGATGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp AAGGGGCCTGCACTCTCCCTCTGGAGGGCTCACAGGTGTGTCCCACCGGACGTGTCCTCCACCCTCCCCTaGACAAGAGGAACAATGTGT +
Preference number: 4 (lower is better)
Translates to: KGPALSLWRAHRCVPPDVSSTLP*TRGTMC
Trigger: ACACATTGTTCCTCTTGTCCAGGGGAGGGTGGAGGA...CACGTCCGGTGGGACACACCTGTGAGCCCTCCAGAGGGAGAGTGCAGGCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR TCA 90 bp CAGCATCGGGTGACCCAGGAAACCCTGCGTCAGCTACAGCATCAGCGCCCAGCCACATGCACGGATTCCTaGACCCCTGAGAACCTCCTT +
Preference number: 4 (lower is better)
Translates to: QHRVTQETLRQLQHQRPATCTDS*TPENLL
Trigger: AAGGAGGTTCTCAGGGGTTCAGGAATCCGTGCATGT...GGCTGGGCGCTGATGCTGTAGCTGACGCAGGGTTTCCTGGGTCACCCGATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp CGCCACAGCAGAAATGGCCAGACGGGCCTGTACCCAAAAAGCCAGCGGCGACAGCATAGGGCTGCTCTCTaGGCATCTCTGAGCAAGACC +
Preference number: 4 (lower is better)
Translates to: RHSRNGQTGLYPKSQRRQHRAAL*ASLSKT
Trigger: GGTCTTGCTCAGAGATGCCCAGAGAGCAGCCCTATG...CTGTCGCCGCTGGCTTTTTGGGTACAGGCCCGTCTGGCCATTTCTGCTGTGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp CCACATAACCACACAATGGAAGCCTTGCAGCCACCTAACAGCAGGAAAGGCCATGAGGAGCCTCCGCCCTaGGTGCCCTGGCTTCCGGGA +
Preference number: 4 (lower is better)
Translates to: PHNHTMEALQPPNSRKGHEEPPP*VPWLPG
Trigger: TCCCGGAAGCCAGGGCACCCAGGGCGGAGGCTCCTC...ATGGCCTTTCCTGCTGTTAGGTGGCTGCAAGGCTTCCATTGTGTGGTTATGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp TCCCCAAAATCATTCAAGGACCCACATAACCACACAATGGAAGCCTTGCAGCCAGTGGCCGCGAGGCCCTaGTCTCCGCGGGGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: SPKSFKDPHNHTMEALQPVAARP*SPRGGN
Trigger: GTTCCCACCCCGCGGAGAGCAGGGCCTCGCGGCCAC...TGGCTGCAAGGCTTCCATTGTGTGGTTATGTGGGTCCTTGAATGATTTTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR TCA 90 bp TCCCCAAAATCATTCAAGGACCCACATAACCACACAATGGAAGCCTTGCAGCCACGCTCTCCCCGCCACTaGAGTAGCGGCCGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SPKSFKDPHNHTMEALQPRSPRH*SSGRGS
Trigger: TGAGCCCCGGCCGCTACTTCAGTGGCGGGGAGAGCG...TGGCTGCAAGGCTTCCATTGTGTGGTTATGTGGGTCCTTGAATGATTTTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp CTGTACCCAAAAAGCCAGCGGCGACAGTGTTGGAGGAAAACAGGCCAGGAGAGCGGCTGTTCTTCACGATaGTGCTGCGCTGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LYPKSQRRQCWRKTGQESGCSSR*CCAASA
Trigger: TGCAGAAGCAGCGCAGCACCATCGTGAAGAACAGCC...GCTCTCCTGGCCTGTTTTCCTCCAACACTGTCGCCGCTGGCTTTTTGGGTACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp CTGGAAACCTCCCCAAAATCATTCAAGGACCCACATAACCACACAATGGAAGCCGGGGTGGGAACTGGATaGCGGCAGGCTGTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: LETSPKSFKDPHNHTMEAGVGTG*RQAVGE
Trigger: CTCCCCCACAGCCTGCCGCCATCCAGTTCCCACCCC...GGCTTCCATTGTGTGGTTATGTGGGTCCTTGAATGATTTTGGGGAGGTTTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp GTAGCCACAGCCTATTTACACACGTGGCGTCAAAGCCACGGCCGTCAATCACTGGACAAGGGACGTCCCTaGGTACCACAGATGTGCCCT +
Preference number: 4 (lower is better)
Translates to: VATAYLHTWRQSHGRQSLDKGRP*VPQMCP
Trigger: AGGGCACATCTGTGGTACCCAGGGACGTCCCTTGTC...CAGTGATTGACGGCCGTGGCTTTGACGCCACGTGTGTAAATAGGCTGTGGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp AAACCTCCCCAAAATCATTCAAGGACCCACATAACCACACAATGGAAGCCTTGCGCCCTGGTTCCTCCGTaGCCACCAGCAGCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: KPPQNHSRTHITTQWKPCALVPP*PPAAGR
Trigger: TCTCCCGGCTGCTGGTGGGCACGGAGGAACCAGGGC...GCAAGGCTTCCATTGTGTGGTTATGTGGGTCCTTGAATGATTTTGGGGAGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp AAACCTCCCCAAAATCATTCAAGGACCCACATAACCACACAATGGAAGCCTTGCAGCCTCCGCCCTGGGTaGCCTGGCTTCCGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: KPPQNHSRTHITTQWKPCSLRPG*PGFRER
Trigger: TCTCTCCCGGAAGCCAGGGCACCCAGGGCGGAGGCT...GCAAGGCTTCCATTGTGTGGTTATGTGGGTCCTTGAATGATTTTGGGGAGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp CCACATAACCACACAATGGAAGCCTTGCAGCCACCTAACAGCAGGAAAGGCCATTGGCTCACCTTGGCCTaGCTGTCCTGGGCGAAACCT +
Preference number: 4 (lower is better)
Translates to: PHNHTMEALQPPNSRKGHWLTLA*LSWAKP
Trigger: AGGTTTCGCCCAGGACAGCCAGGCCAAGGTGAGCCA...ATGGCCTTTCCTGCTGTTAGGTGGCTGCAAGGCTTCCATTGTGTGGTTATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp CCACATAACCACACAATGGAAGCCTTGCAGCCACCTAACAGCAGGAAAGGCCATACCACAGATGTGCCCTaGTTCCTCCGTGCCCACCAG +
Preference number: 4 (lower is better)
Translates to: PHNHTMEALQPPNSRKGHTTDVP*FLRAHQ
Trigger: CTGGTGGGCACGGAGGAACCAGGGCACATCTGTGGT...ATGGCCTTTCCTGCTGTTAGGTGGCTGCAAGGCTTCCATTGTGTGGTTATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR TCA 90 bp AAACCTCCCCAAAATCATTCAAGGACCCACATAACCACACAATGGAAGCCTTGCCCTGGGCGAAACCTTTaGGCAGAGACACGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: KPPQNHSRTHITTQWKPCPGRNL*AETRSG
Trigger: CCCGCTCCGTGTCTCTGCTCAAAGGTTTCGCCCAGG...GCAAGGCTTCCATTGTGTGGTTATGTGGGTCCTTGAATGATTTTGGGGAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR GCA 90 bp AAACCTCCCCAAAATCATTCAAGGACCCACATAACCACACAATGGAAGCCTTGCTCGATCTGGATCACGTaGCGGGTGGCTGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: KPPQNHSRTHITTQWKPCSIWIT*RVAAFS
Trigger: GCTGAAGGCAGCCACCCGGCACGTGATCCAGATCGA...GCAAGGCTTCCATTGTGTGGTTATGTGGGTCCTTGAATGATTTTGGGGAGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp AAACCTCCCCAAAATCATTCAAGGACCCACATAACCACACAATGGAAGCCTTGCGGCTCTCAGCCAGCATaGCGAAGCCGTAGGACGTCT +
Preference number: 4 (lower is better)
Translates to: KPPQNHSRTHITTQWKPCGSQPA*RSRRTS
Trigger: AGACGTCCTACGGCTTCGCCATGCTGGCTGAGAGCC...GCAAGGCTTCCATTGTGTGGTTATGTGGGTCCTTGAATGATTTTGGGGAGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp TCCCCAAAATCATTCAAGGACCCACATAACCACACAATGGAAGCCTTGCAGCCACAGCGGCGACAGTGTTaGAGGAAAACAGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SPKSFKDPHNHTMEALQPQRRQC*RKTGQE
Trigger: CTCCTGGCCTGTTTTCCTCCAACACTGTCGCCGCTG...TGGCTGCAAGGCTTCCATTGTGTGGTTATGTGGGTCCTTGAATGATTTTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR TCA 90 bp AAACCTCCCCAAAATCATTCAAGGACCCACATAACCACACAATGGAAGCCTTGCAGAAGAAATCCTCGTTaGAGACGGGGCGGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: KPPQNHSRTHITTQWKPCRRNPR*RRGGGC
Trigger: ACAGCCGCCGCCCCGTCTTCAACGAGGATTTCTTCT...GCAAGGCTTCCATTGTGTGGTTATGTGGGTCCTTGAATGATTTTGGGGAGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332235.8
3UTR CAA 72 bp TCATTCAAGGACCCACATAACCACACAATGGAAGCCTaGCAGCCACCTAACAGCAGGAAAGGCCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: SFKDPHNHTMEA*QPPNSRKGHSQ
Trigger: CTGGCTATGGCCTTTCCTGCTGTTAGGTGGCTGCAAGGCTTCCATTGTGTGGTTATGTGGGTCCTTGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR TCA 90 bp TGCACTATAAACAGCATTTATAAACAAACACAGCTGGGGAGTGTCTTAAAGATTCTCTCTGGGCATCTCTaGGCAAGACCCTCCGGCGCC +
Preference number: 4 (lower is better)
Translates to: CTINSIYKQTQLGSVLKILSGHL*ARPSGA
Trigger: GGCGCCGGAGGGTCTTGCTCAGAGATGCCCAGAGAG...AATCTTTAAGACACTCCCCAGCTGTGTTTGTTTATAAATGCTGTTTATAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CCA 90 bp TCCCCAAAATCATTCAAGGACCCACATAACCACACAATGGAAGCCTTGCAGCCACACATAACCACACAATaGAAGCCTTGCAGCCACCTA +
Preference number: 4 (lower is better)
Translates to: SPKSFKDPHNHTMEALQPHITTQ*KPCSHL
Trigger: TAGGTGGCTGCAAGGCTTCCATTGTGTGGTTATGTG...TGGCTGCAAGGCTTCCATTGTGTGGTTATGTGGGTCCTTGAATGATTTTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR TCA 90 bp TGCACTATAAACAGCATTTATAAACAAACACAGCTGGGGAGTGTCTTAAAGATTCCAGTCAGCATCGGGTaGCCCAGGAAACCCTGCGTC +
Preference number: 4 (lower is better)
Translates to: CTINSIYKQTQLGSVLKIPVSIG*PRKPCV
Trigger: GACGCAGGGTTTCCTGGGTCACCCGATGCTGACTGG...AATCTTTAAGACACTCCCCAGCTGTGTTTGTTTATAAATGCTGTTTATAGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS GCA 90 bp GCAGGCGGGCCTGGCCGGCCTCGTACTCGGCCAGCAGCCGCACGCTaGCCCGAGGGCCCACGTGGACCGTGTGCTCCCCACGCGCCTGGC +
Preference number: 5 (lower is better)
Translates to: AGGPGRPRTRPAAAR*PEGPRGPCAPHAPG
Trigger: GCCAGGCGCGTGGGGAGCACACGGTCCACGTGGGCCCTCGGGGCAGCGTGCGGCTGCTGGCCGAGTACGAGGCCGGCCAGGCCCGCCTGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS CCA 90 bp CCGGGGCTGGCGTCCGGGGTGCTGTCGTCCGCAGACAGGGAGCCGTaGCGGCCCACGGAGTGCCGGAGCTGGCTCACCTTGGCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: PGLASGVLSSADREP*RPTECRSWLTLAWL
Trigger: CAGCCAGGCCAAGGTGAGCCAGCTCCGGCACTCCGTGGGCCGCCACGGCTCCCTGTCTGCGGACGACAGCACCCCGGACGCCAGCCCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS GCA 90 bp GCGGACCCGCCCGCCAGCACCCGGTGTGGAGGAGAGACCGGGGTCTaGCCTCTGCACCCGAGCGGACAGCGAGCAGGTCCCCGCTCTACA +
Preference number: 5 (lower is better)
Translates to: ADPPASTRCGGETGV*PLHPSGQRAGPRST
Trigger: TGTAGAGCGGGGACCTGCTCGCTGTCCGCTCGGGTGCAGAGGGCAGACCCCGGTCTCTCCTCCACACCGGGTGCTGGCGGGCGGGTCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS GCA 90 bp CGCCCGCCAGCACCCGGTGTGGAGGAGAGACCGGGGTCTGCCCTCTaGACCCGAGCGGACAGCGAGCAGGTCCCCGCTCTACAGGAAGGG +
Preference number: 5 (lower is better)
Translates to: RPPAPGVEERPGSAL*TRADSEQVPALQEG
Trigger: CCCTTCCTGTAGAGCGGGGACCTGCTCGCTGTCCGCTCGGGTGCAGAGGGCAGACCCCGGTCTCTCCTCCACACCGGGTGCTGGCGGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CAA 90 bp GGAGGGCTCACAGGTGTGTCCCACCGGACGTGCAGCAGGGGCCCAGCTGCTCCTGGCCCCTTGGAGGCCTaGTCCCCCGCCTCACTCCCC +
Preference number: 5 (lower is better)
Translates to: GGLTGVSHRTCSRGPAAPGPLEA*SPASLP
Trigger: GGGGAGTGAGGCGGGGGACAAGGCCTCCAAGGGGCC...AGGAGCAGCTGGGCCCCTGCTGCACGTCCGGTGGGACACACCTGTGAGCCCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS TCA 90 bp GCTTCTGCAGCTTGCCCGGCACCAGGCACAGGCCCACGCAGCAGTTaGTGCTGCGGGCGTCGCACAGGCGGTCGTAGAGGCCCTCGGCGG +
Preference number: 5 (lower is better)
Translates to: ASAACPAPGTGPRSS*CCGRRTGGRRGPRR
Trigger: CCGCCGAGGGCCTCTACGACCGCCTGTGCGACGCCCGCAGCATCAACTGCTGCGTGGGCCTGTGCCTGGTGCCGGGCAAGCTGCAGAAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS CCA 90 bp CGAAGCCGTAGGACGTCTGGGCCTTGGGCACCGAGGGCAGGGACATaGCACCCTGGGCCTGGGGGTCGGCGTCAGTGGCCTCCTCGGACA +
Preference number: 5 (lower is better)
Translates to: RSRRTSGPWAPRAGT*HPGPGGRRQWPPRT
Trigger: TGTCCGAGGAGGCCACTGACGCCGACCCCCAGGCCCAGGGTGCCATGTCCCTGCCCTCGGTGCCCAAGGCCCAGACGTCCTACGGCTTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CAA 90 bp CTGTCCACGGCCCCGCCCTGGCCACATGCACGGATTCCTGAACCCCTGAGAACCTCACCCCCGTTGGCCTaGGCAGCTGCCCGGCGGCGC +
Preference number: 5 (lower is better)
Translates to: LSTAPPWPHARIPEPLRTSPPLA*AAARRR
Trigger: GCGCCGCCGGGCAGCTGCCAAGGCCAACGGGGGTGA...GGTTCTCAGGGGTTCAGGAATCCGTGCATGTGGCCAGGGCGGGGCCGTGGACAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CAA 90 bp ACCCGGTGTGGAGGAGAGACCGGGGTCTGCCCTCTGCACCCGAGCGGACAGCGACGGAGCTGGCTCACCTaGGCCTGGCTGTCCTGGGCG +
Preference number: 5 (lower is better)
Translates to: TRCGGETGVCPLHPSGQRRSWLT*AWLSWA
Trigger: CGCCCAGGACAGCCAGGCCAAGGTGAGCCAGCTCCG...TCGCTGTCCGCTCGGGTGCAGAGGGCAGACCCCGGTCTCTCCTCCACACCGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CAA 90 bp GGTGTGGCCGCGAGGCCCTGCTCTCCGCGGGGTGGGAACTGGATGGCGGCAGGCTCGGGCGTCAACACATaGCTGTACAGGGGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: GVAARPCSPRGGNWMAAGSGVNT*LYRGPL
Trigger: CAAGGGGCCCCTGTACAGCAATGTGTTGACGCCCGA...GCCTGCCGCCATCCAGTTCCCACCCCGCGGAGAGCAGGGCCTCGCGGCCACACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CAA 90 bp TGGCCGCGAGGCCCTGCTCTCCGCGGGGTGGGAACTGGATGGCGGCAGGCTGTGAGCAGCGTGTCCCGCTaGAGGCTGCTGCCCTTGTTC +
Preference number: 5 (lower is better)
Translates to: WPRGPALRGVGTGWRQAVSSVSR*RLLPLF
Trigger: GAACAAGGGCAGCAGCCTCAAGCGGGACACGCTGCT...CACAGCCTGCCGCCATCCAGTTCCCACCCCGCGGAGAGCAGGGCCTCGCGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS CCA 90 bp CCGAGGGCAGGGACATGGCACCCTGGGCCTGGGGGTCGGCGTCAGTaGCCTCCTCGGACAGCCAGTCCTCGGCACTCTCGATCTGGATCA +
Preference number: 5 (lower is better)
Translates to: PRAGTWHPGPGGRRQ*PPRTASPRHSRSGS
Trigger: TGATCCAGATCGAGAGTGCCGAGGACTGGCTGTCCGAGGAGGCCACTGACGCCGACCCCCAGGCCCAGGGTGCCATGTCCCTGCCCTCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS CCA 90 bp GAGCCGTGGCGGCCCACGGAGTGCCGGAGCTGGCTCACCTTGGCCTaGCTGTCCTGGGCGAAACCTTTGAGCAGAGACACGGAGCGGGAC +
Preference number: 5 (lower is better)
Translates to: EPWRPTECRSWLTLA*LSWAKPLSRDTERD
Trigger: GTCCCGCTCCGTGTCTCTGCTCAAAGGTTTCGCCCAGGACAGCCAGGCCAAGGTGAGCCAGCTCCGGCACTCCGTGGGCCGCCACGGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CAA 90 bp TGGGCCTGGTGTGGCCGCGAGGCCCTGCTCTCCGCGGGGTGGGAACTGGATGGCCCAGCGGCGACAGTGTaGGAGGAAAACAGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: WAWCGREALLSAGWELDGPAATV*EENRPG
Trigger: TCCTGGCCTGTTTTCCTCCAACACTGTCGCCGCTGG...GCCATCCAGTTCCCACCCCGCGGAGAGCAGGGCCTCGCGGCCACACCAGGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS CCA 90 bp CGGCCCACGGAGTGCCGGAGCTGGCTCACCTTGGCCTGGCTGTCCTaGGCGAAACCTTTGAGCAGAGACACGGAGCGGGACAGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: RPTECRSWLTLAWLS*AKPLSRDTERDSRG
Trigger: CCCTCTGCTGTCCCGCTCCGTGTCTCTGCTCAAAGGTTTCGCCCAGGACAGCCAGGCCAAGGTGAGCCAGCTCCGGCACTCCGTGGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS CCA 90 bp TCGTCCGCAGACAGGGAGCCGTGGCGGCCCACGGAGTGCCGGAGCTaGCTCACCTTGGCCTGGCTGTCCTGGGCGAAACCTTTGAGCAGA +
Preference number: 5 (lower is better)
Translates to: SSADREPWRPTECRS*LTLAWLSWAKPLSR
Trigger: TCTGCTCAAAGGTTTCGCCCAGGACAGCCAGGCCAAGGTGAGCCAGCTCCGGCACTCCGTGGGCCGCCACGGCTCCCTGTCTGCGGACGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CAA 90 bp ACCCGGTGTGGAGGAGAGACCGGGGTCTGCCCTCTGCACCCGAGCGGACAGCGAGCCTTCAGCAGGCTCTaGCTCTCGGCTGCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: TRCGGETGVCPLHPSGQRAFSRL*LSAASL
Trigger: CAAGCTGGCAGCCGAGAGCAAGAGCCTGCTGAAGGC...TCGCTGTCCGCTCGGGTGCAGAGGGCAGACCCCGGTCTCTCCTCCACACCGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS GCA 90 bp GCCTCCTCGGACAGCCAGTCCTCGGCACTCTCGATCTGGATCACGTaGCGGGTGGCTGCCTTCAGCAGGCTCTTGCTCTCGGCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: ASSDSQSSALSIWIT*RVAAFSRLLLSAAS
Trigger: GCTGGCAGCCGAGAGCAAGAGCCTGCTGAAGGCAGCCACCCGGCACGTGATCCAGATCGAGAGTGCCGAGGACTGGCTGTCCGAGGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS GCA 90 bp TCGTTGAAGACGGGGCGGCGGCTGTTCTTCACGATGGTGCTGCGCTaGTTCTGCAGCTTGCCCGGCACCAGGCACAGGCCCACGCAGCAG +
Preference number: 5 (lower is better)
Translates to: SLKTGRRLFFTMVLR*FCSLPGTRHRPTQQ
Trigger: CTGCTGCGTGGGCCTGTGCCTGGTGCCGGGCAAGCTGCAGAAGCAGCGCAGCACCATCGTGAAGAACAGCCGCCGCCCCGTCTTCAACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CAA 90 bp TGGCCGCGAGGCCCTGCTCTCCGCGGGGTGGGAACTGGATGGCGGCAGGCTGTGTTGAGGCTGCTGCCCTaGTTCACCACCTTGATCCTG +
Preference number: 5 (lower is better)
Translates to: WPRGPALRGVGTGWRQAVLRLLP*FTTLIL
Trigger: CAGGATCAAGGTGGTGAACAAGGGCAGCAGCCTCAA...CACAGCCTGCCGCCATCCAGTTCCCACCCCGCGGAGAGCAGGGCCTCGCGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS GCA 90 bp AAGACGGGGCGGCGGCTGTTCTTCACGATGGTGCTGCGCTGCTTCTaGAGCTTGCCCGGCACCAGGCACAGGCCCACGCAGCAGTTGATG +
Preference number: 5 (lower is better)
Translates to: KTGRRLFFTMVLRCF*SLPGTRHRPTQQLM
Trigger: CATCAACTGCTGCGTGGGCCTGTGCCTGGTGCCGGGCAAGCTGCAGAAGCAGCGCAGCACCATCGTGAAGAACAGCCGCCGCCCCGTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS CCA 90 bp CGGACAGCCAGTCCTCGGCACTCTCGATCTGGATCACGTGCCGGGTaGCTGCCTTCAGCAGGCTCTTGCTCTCGGCTGCCAGCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: RTASPRHSRSGSRAG*LPSAGSCSRLPAWQ
Trigger: CTGCCAAGCTGGCAGCCGAGAGCAAGAGCCTGCTGAAGGCAGCCACCCGGCACGTGATCCAGATCGAGAGTGCCGAGGACTGGCTGTCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS CCA 90 bp GCGTCAGTGGCCTCCTCGGACAGCCAGTCCTCGGCACTCTCGATCTaGATCACGTGCCGGGTGGCTGCCTTCAGCAGGCTCTTGCTCTCG +
Preference number: 5 (lower is better)
Translates to: ASVASSDSQSSALSI*ITCRVAAFSRLLLS
Trigger: CGAGAGCAAGAGCCTGCTGAAGGCAGCCACCCGGCACGTGATCCAGATCGAGAGTGCCGAGGACTGGCTGTCCGAGGAGGCCACTGACGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CAA 90 bp GGAGGGCTCACAGGTGTGTCCCACCGGACGTGCAGCAGGGGCCCAGCTGCTCCTAAGAAGAAATCCTCGTaGAAGACGGGGCGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: GGLTGVSHRTCSRGPAAPKKKSS*KTGRRL
Trigger: CAGCCGCCGCCCCGTCTTCAACGAGGATTTCTTCTT...AGGAGCAGCTGGGCCCCTGCTGCACGTCCGGTGGGACACACCTGTGAGCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CAA 90 bp CAAGAGGAACAATGTGTGGCAAACGGGCTGACAAGGGACGTCCCTGGGTACCACCCCCCATCACCCCCGTaGGCCTTGGCAGCTGCCCGG +
Preference number: 5 (lower is better)
Translates to: QEEQCVANGLTRDVPGYHPPSPP*ALAAAR
Trigger: CCGGGCAGCTGCCAAGGCCAACGGGGGTGATGGGGG...GTGGTACCCAGGGACGTCCCTTGTCAGCCCGTTTGCCACACATTGTTCCTCTTG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CAA 90 bp GTGCCCTGGTTCCTCCGTGCCCACCAGCAGCCGGGAGAGGCGAAGGCACTGGCCAAAAAGTCGGGGATCTaGTCGGGCGTCAACACATTG +
Preference number: 5 (lower is better)
Translates to: VPWFLRAHQQPGEAKALAKKSGI*SGVNTL
Trigger: CAATGTGTTGACGCCCGACAAGATCCCCGACTTTTT...GGCCAGTGCCTTCGCCTCTCCCGGCTGCTGGTGGGCACGGAGGAACCAGGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CAA 90 bp AGATGTGCCCTGGTTCCTCCGTGCCCACCAGCAGCCGGGAGAGGCGAAGGCACTCCCTTGTTCACCACCTaGATCCTGAGGGCCAGTTTC +
Preference number: 5 (lower is better)
Translates to: RCALVPPCPPAAGRGEGTPLFTT*ILRASF
Trigger: GAAACTGGCCCTCAGGATCAAGGTGGTGAACAAGGG...AGTGCCTTCGCCTCTCCCGGCTGCTGGTGGGCACGGAGGAACCAGGGCACATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CAA 90 bp TCCCCAAAATCATTCAAGGACCCACATAACCACACAATGGAAGCCTTGCAGCCAAGGCCCACGCAGCAGTaGATGCTGCGGGCGTCGCAC +
Preference number: 5 (lower is better)
Translates to: SPKSFKDPHNHTMEALQPRPTQQ*MLRASH
Trigger: GTGCGACGCCCGCAGCATCAACTGCTGCGTGGGCCT...TGGCTGCAAGGCTTCCATTGTGTGGTTATGTGGGTCCTTGAATGATTTTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CAA 90 bp CTGGAAACCTCCCCAAAATCATTCAAGGACCCACATAACCACACAATGGAAGCCTCCTGGGCGAAACCTTaGAGCAGAGACACGGAGCGG +
Preference number: 5 (lower is better)
Translates to: LETSPKSFKDPHNHTMEASWAKP*SRDTER
Trigger: CCGCTCCGTGTCTCTGCTCAAAGGTTTCGCCCAGGA...GGCTTCCATTGTGTGGTTATGTGGGTCCTTGAATGATTTTGGGGAGGTTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CAA 90 bp AAACCTCCCCAAAATCATTCAAGGACCCACATAACCACACAATGGAAGCCTTGCTCCAAGAACCACATGTaGGTTTTTCTCATGGGGGCG +
Preference number: 5 (lower is better)
Translates to: KPPQNHSRTHITTQWKPCSKNHM*VFLMGA
Trigger: CGCCCCCATGAGAAAAACCAACATGTGGTTCTTGGA...GCAAGGCTTCCATTGTGTGGTTATGTGGGTCCTTGAATGATTTTGGGGAGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CAA 90 bp TGCACTATAAACAGCATTTATAAACAAACACAGCTGGGGAGTGTCTTAAAGATTTGTGGGCTCCAAGACTaGTCACCTCCCTGTCCACGG +
Preference number: 5 (lower is better)
Translates to: CTINSIYKQTQLGSVLKICGLQD*SPPCPR
Trigger: CCGTGGACAGGGAGGTGACAAGTCTTGGAGCCCACA...AATCTTTAAGACACTCCCCAGCTGTGTTTGTTTATAAATGCTGTTTATAGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS-3UTR CAA 90 bp TGCACTATAAACAGCATTTATAAACAAACACAGCTGGGGAGTGTCTTAAAGATTCACACAATGGAAGCCTaGCAGCCACCTAACAGCAGG +
Preference number: 5 (lower is better)
Translates to: CTINSIYKQTQLGSVLKIHTMEA*QPPNSR
Trigger: CCTGCTGTTAGGTGGCTGCAAGGCTTCCATTGTGTG...AATCTTTAAGACACTCCCCAGCTGTGTTTGTTTATAAATGCTGTTTATAGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS GCA 72 bp TCAGGCGGCGCCGGCTCCCGGGGCTGGCGTCCGGGGTaGTGTCGTCCGCAGACAGGGAGCCGTGGCGGCCCA +
Preference number: 6 (lower is better)
Translates to: SGGAGSRGWRPG*CRPQTGSRGGP
Trigger: TGGGCCGCCACGGCTCCCTGTCTGCGGACGACAGCACCCCGGACGCCAGCCCCGGGAGCCGGCGCCGCCTGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS CCA 72 bp TCGGCCAGCAGCCGCACGCTGCCCCGAGGGCCCACGTaGACCGTGTGCTCCCCACGCGCCTGGCCCGACTCG +
Preference number: 6 (lower is better)
Translates to: SASSRTLPRGPT*TVCSPRAWPDS
Trigger: CGAGTCGGGCCAGGCGCGTGGGGAGCACACGGTCCACGTGGGCCCTCGGGGCAGCGTGCGGCTGCTGGCCGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS CCA 72 bp GCGTCCGGGGTGCTGTCGTCCGCAGACAGGGAGCCGTaGCGGCCCACGGAGTGCCGGAGCTGGCTCACCTTG +
Preference number: 6 (lower is better)
Translates to: ASGVLSSADREP*RPTECRSWLTL
Trigger: CAAGGTGAGCCAGCTCCGGCACTCCGTGGGCCGCCACGGCTCCCTGTCTGCGGACGACAGCACCCCGGACGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS CAA 72 bp GCTGCCTTCAGCAGGCTCTTGCTCTCGGCTGCCAGCTaGGCAGGCAGCCGGGGGCTCCGTGGGGTCTGGCGG +
Preference number: 6 (lower is better)
Translates to: AAFSRLLLSAAS*AGSRGLRGVWR
Trigger: CCGCCAGACCCCACGGAGCCCCCGGCTGCCTGCCAAGCTGGCAGCCGAGAGCAAGAGCCTGCTGAAGGCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS TCA 72 bp GCTTGCCCGGCACCAGGCACAGGCCCACGCAGCAGTTaGTGCTGCGGGCGTCGCACAGGCGGTCGTAGAGGC +
Preference number: 6 (lower is better)
Translates to: ACPAPGTGPRSS*CCGRRTGGRRG
Trigger: GCCTCTACGACCGCCTGTGCGACGCCCGCAGCATCAACTGCTGCGTGGGCCTGTGCCTGGTGCCGGGCAAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS GCA 72 bp GCACCCGGTGTGGAGGAGAGACCGGGGTCTGCCCTCTaGACCCGAGCGGACAGCGAGCAGGTCCCCGCTCTA +
Preference number: 6 (lower is better)
Translates to: APGVEERPGSAL*TRADSEQVPAL
Trigger: TAGAGCGGGGACCTGCTCGCTGTCCGCTCGGGTGCAGAGGGCAGACCCCGGTCTCTCCTCCACACCGGGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS CCA 72 bp GGGACATGGCACCCTGGGCCTGGGGGTCGGCGTCAGTaGCCTCCTCGGACAGCCAGTCCTCGGCACTCTCGA +
Preference number: 6 (lower is better)
Translates to: GTWHPGPGGRRQ*PPRTASPRHSR
Trigger: TCGAGAGTGCCGAGGACTGGCTGTCCGAGGAGGCCACTGACGCCGACCCCCAGGCCCAGGGTGCCATGTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS CCA 72 bp GACAGGGAGCCGTGGCGGCCCACGGAGTGCCGGAGCTaGCTCACCTTGGCCTGGCTGTCCTGGGCGAAACCT +
Preference number: 6 (lower is better)
Translates to: DREPWRPTECRS*LTLAWLSWAKP
Trigger: AGGTTTCGCCCAGGACAGCCAGGCCAAGGTGAGCCAGCTCCGGCACTCCGTGGGCCGCCACGGCTCCCTGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS CAA 90 bp CCGAGCAGCGTGTCCCGCTTGAGGCTGCTGCCCTTGTTCACCACCTaGATCCTGAGGGCCAGTTTCCGGACGCTGGCGGGCCCCAGGCCG +
Preference number: 6 (lower is better)
Translates to: PSSVSRLRLLPLFTT*ILRASFRTLAGPRP
Trigger: CGGCCTGGGGCCCGCCAGCGTCCGGAAACTGGCCCTCAGGATCAAGGTGGTGAACAAGGGCAGCAGCCTCAAGCGGGACACGCTGCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS GCA 72 bp ACGGGGCGGCGGCTGTTCTTCACGATGGTGCTGCGCTaGTTCTGCAGCTTGCCCGGCACCAGGCACAGGCCC +
Preference number: 6 (lower is better)
Translates to: TGRRLFFTMVLR*FCSLPGTRHRP
Trigger: GGGCCTGTGCCTGGTGCCGGGCAAGCTGCAGAAGCAGCGCAGCACCATCGTGAAGAACAGCCGCCGCCCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS CAA 90 bp GACAGGGAGCCGTGGCGGCCCACGGAGTGCCGGAGCTGGCTCACCTaGGCCTGGCTGTCCTGGGCGAAACCTTTGAGCAGAGACACGGAG +
Preference number: 6 (lower is better)
Translates to: DREPWRPTECRSWLT*AWLSWAKPLSRDTE
Trigger: CTCCGTGTCTCTGCTCAAAGGTTTCGCCCAGGACAGCCAGGCCAAGGTGAGCCAGCTCCGGCACTCCGTGGGCCGCCACGGCTCCCTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS GCA 72 bp CGGCGGCTGTTCTTCACGATGGTGCTGCGCTGCTTCTaGAGCTTGCCCGGCACCAGGCACAGGCCCACGCAG +
Preference number: 6 (lower is better)
Translates to: RRLFFTMVLRCF*SLPGTRHRPTQ
Trigger: CTGCGTGGGCCTGTGCCTGGTGCCGGGCAAGCTGCAGAAGCAGCGCAGCACCATCGTGAAGAACAGCCGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS CCA 72 bp GCCTCCTCGGACAGCCAGTCCTCGGCACTCTCGATCTaGATCACGTGCCGGGTGGCTGCCTTCAGCAGGCTC +
Preference number: 6 (lower is better)
Translates to: ASSDSQSSALSI*ITCRVAAFSRL
Trigger: GAGCCTGCTGAAGGCAGCCACCCGGCACGTGATCCAGATCGAGAGTGCCGAGGACTGGCTGTCCGAGGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS CAA 72 bp GCCAGAGCCCCGTGCTCACTGTGGAACAGAGACTCCTaGCGCCTCGTGTGGGGGCTCTCAGCCAGCATGGCG +
Preference number: 6 (lower is better)
Translates to: ARAPCSLWNRDS*RLVWGLSASMA
Trigger: CGCCATGCTGGCTGAGAGCCCCCACACGAGGCGCAAGGAGTCTCTGTTCCACAGTGAGCACGGGGCTCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS CCA 72 bp GAGTGCCGGAGCTGGCTCACCTTGGCCTGGCTGTCCTaGGCGAAACCTTTGAGCAGAGACACGGAGCGGGAC +
Preference number: 6 (lower is better)
Translates to: ECRSWLTLAWLS*AKPLSRDTERD
Trigger: GTCCCGCTCCGTGTCTCTGCTCAAAGGTTTCGCCCAGGACAGCCAGGCCAAGGTGAGCCAGCTCCGGCACTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS CAA 72 bp GTGTCCCGCTTGAGGCTGCTGCCCTTGTTCACCACCTaGATCCTGAGGGCCAGTTTCCGGACGCTGGCGGGC +
Preference number: 6 (lower is better)
Translates to: VSRLRLLPLFTT*ILRASFRTLAG
Trigger: GCCCGCCAGCGTCCGGAAACTGGCCCTCAGGATCAAGGTGGTGAACAAGGGCAGCAGCCTCAAGCGGGACAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS CAA 90 bp AGCTCCTTCTCCCCGAGCAGCGTGTCCCGCTTGAGGCTGCTGCCCTaGTTCACCACCTTGATCCTGAGGGCCAGTTTCCGGACGCTGGCG +
Preference number: 6 (lower is better)
Translates to: SSFSPSSVSRLRLLP*FTTLILRASFRTLA
Trigger: CGCCAGCGTCCGGAAACTGGCCCTCAGGATCAAGGTGGTGAACAAGGGCAGCAGCCTCAAGCGGGACACGCTGCTCGGGGAGAAGGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS CAA 90 bp AGGGAGGTCAGGGGCAGCTCCTTCTCCCCGAGCAGCGTGTCCCGCTaGAGGCTGCTGCCCTTGTTCACCACCTTGATCCTGAGGGCCAGT +
Preference number: 6 (lower is better)
Translates to: REVRGSSFSPSSVSR*RLLPLFTTLILRAS
Trigger: ACTGGCCCTCAGGATCAAGGTGGTGAACAAGGGCAGCAGCCTCAAGCGGGACACGCTGCTCGGGGAGAAGGAGCTGCCCCTGACCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS GCA 72 bp GACAGCCAGTCCTCGGCACTCTCGATCTGGATCACGTaGCGGGTGGCTGCCTTCAGCAGGCTCTTGCTCTCG +
Preference number: 6 (lower is better)
Translates to: DSQSSALSIWIT*RVAAFSRLLLS
Trigger: CGAGAGCAAGAGCCTGCTGAAGGCAGCCACCCGGCACGTGATCCAGATCGAGAGTGCCGAGGACTGGCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS CAA 72 bp TCCCCGAGCAGCGTGTCCCGCTTGAGGCTGCTGCCCTaGTTCACCACCTTGATCCTGAGGGCCAGTTTCCGG +
Preference number: 6 (lower is better)
Translates to: SPSSVSRLRLLP*FTTLILRASFR
Trigger: CCGGAAACTGGCCCTCAGGATCAAGGTGGTGAACAAGGGCAGCAGCCTCAAGCGGGACACGCTGCTCGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332235.8
CDS CAA 72 bp AGGGGCAGCTCCTTCTCCCCGAGCAGCGTGTCCCGCTaGAGGCTGCTGCCCTTGTTCACCACCTTGATCCTG +
Preference number: 6 (lower is better)
Translates to: RGSSFSPSSVSR*RLLPLFTTLIL
Trigger: CAGGATCAAGGTGGTGAACAAGGGCAGCAGCCTCAAGCGGGACACGCTGCTCGGGGAGAAGGAGCTGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332235.8