Pregenerated sensors for C2CD4B (Homo sapiens)
Ensembl gene IDs: ENSG00000205502Ensembl transcript IDs: ENST00000380392.4
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TACTTCCTTTCTCTCCCAGTCCCAAGCCAACCCATTTTTCCTTGGAATGCAAAAGATATGGGGGTCCTGTaGACAGAACAGGGAGTCATT | + |
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Preference number: 2 (lower is better) Translates to: YFLSLPVPSQPIFPWNAKDMGVL*TEQGVI Trigger: AATGACTCCCTGTTCTGTTCACAGGACCCCCATATC...TTTTGCATTCCAAGGAAAAATGGGTTGGCTTGGGACTGGGAGAGAAAGGAAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| 3UTR-3UTR TCA 90 bp | CTCTCCCAGTCCCAAGCCAACCCATTTTTCCTTGGAATGCAAAAATGGTCTGGATTTACCAATAGACGATaGCAAATGTGGATGGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: LSQSQANPFFLGMQKWSGFTNRR*QMWMVR Trigger: CCTCACCATCCACATTTGTCATCGTCTATTGGTAAA...TCCAGACCATTTTTGCATTCCAAGGAAAAATGGGTTGGCTTGGGACTGGGAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| 3UTR-3UTR TCA 90 bp | ACTTCCTTTCTCTCCCAGTCCCAAGCCAACCCATTTTTCCTTGGAATGCAAAAAGACAAATGTGGATGGTaGGGAAGTAAAACGTCAATA | + |
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Preference number: 2 (lower is better) Translates to: TSFLSQSQANPFFLGMQKDKCGW*GSKTSI Trigger: TATTGACGTTTTACTTCCTCACCATCCACATTTGTC...TTTTTGCATTCCAAGGAAAAATGGGTTGGCTTGGGACTGGGAGAGAAAGGAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| 3UTR TCA 72 bp | TCTTCTTTACCAATAGACGATGACAAATGTGGATGGTaGGGAAGTAAAACGTCAATAAAGCAGTATCATAAA | + |
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Preference number: 3 (lower is better) Translates to: SSLPIDDDKCGW*GSKTSIKQYHK Trigger: TTTATGATACTGCTTTATTGACGTTTTACTTCCTCACCATCCACATTTGTCATCGTCTATTGGTAAAGAAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR GCA 90 bp | GGAATGCAAAAATGGTCTGGAAAGAGATATGGGGGTCCTGTGAACAGAACAGGGACCACAGCGCTGCATTaGCAACGCGCAGTGCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: GMQKWSGKRYGGPVNRTGTTALH*QRAVPG Trigger: GCCGGGCACTGCGCGTTGGCAATGCAGCGCTGTGGT...CCCTGTTCTGTTCACAGGACCCCCATATCTCTTTCCAGACCATTTTTGCATTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR GCA 90 bp | GTCTGGAAAGAGATATGGGGGTCCTGTGAACAGAACAGGGAGTCATTATCTTTTGCTTCGGCGCGGAGCTaGCTGCGGCCGAGGAACAGA | + |
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Preference number: 4 (lower is better) Translates to: VWKEIWGSCEQNRESLSFASARS*LRPRNR Trigger: TCTGTTCCTCGGCCGCAGGCAGCTCCGCGCCGAAGC...AAAAGATAATGACTCCCTGTTCTGTTCACAGGACCCCCATATCTCTTTCCAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR GCA 90 bp | GTCTGGAAAGAGATATGGGGGTCCTGTGAACAGAACAGGGAGTCATTATCTTTTTTGGAGACTCGAGCGTaGAAGGGGCCGGCAGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: VWKEIWGSCEQNRESLSFLETRA*KGPAAA Trigger: CGCGGCTGCCGGCCCCTTGCACGCTCGAGTCTCCAA...AAAAGATAATGACTCCCTGTTCTGTTCACAGGACCCCCATATCTCTTTCCAGAC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR CCA 90 bp | GTCTGGAAAGAGATATGGGGGTCCTGTGAACAGAACAGGGAGTCATTATCTTTTGGCGGCGGCCCGGATTaGAGACTCGAGCGTGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: VWKEIWGSCEQNRESLSFGGGPD*RLERAR Trigger: CCTTGCACGCTCGAGTCTCCAATCCGGGCCGCCGCC...AAAAGATAATGACTCCCTGTTCTGTTCACAGGACCCCCATATCTCTTTCCAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR CCA 90 bp | ACTTCCTTTCTCTCCCAGTCCCAAGCCAACCCATTTTTCCTTGGAATGCAAAAACAGGAAGCGGGGCCCTaGATGACAGCGGGCTCGAGG | + |
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Preference number: 4 (lower is better) Translates to: TSFLSQSQANPFFLGMQKQEAGP*MTAGSR Trigger: CCTCGAGCCCGCTGTCATCCAGGGCCCCGCTTCCTG...TTTTTGCATTCCAAGGAAAAATGGGTTGGCTTGGGACTGGGAGAGAAAGGAAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR TCA 90 bp | GGAATTAAAAACAATGCAGATGGGTGTACTTCCTTTCTCTCCCAGTCCCAAGCCGGATGCGATTCGGCGTaGGCACTTTGGCGAAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: GIKNNADGCTSFLSQSQAGCDSA*ALWRRR Trigger: CCGCCTTCGCCAAAGTGCTCACGCCGAATCGCATCC...GGCTTGGGACTGGGAGAGAAAGGAAGTACACCCATCTGCATTGTTTTTAATTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR GCA 90 bp | TTCCTTTCTCTCCCAGTCCCAAGCCAACCCATTTTTCCTTGGAATGCAAAAATGTGGCCTCTAGCCCGCTaGCGAGGCGCCACCTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: FLSLPVPSQPIFPWNAKMWPLAR*RGATFS Trigger: ACTGAAGGTGGCGCCTCGGCAGCGGGCTAGAGGCCA...CATTTTTGCATTCCAAGGAAAAATGGGTTGGCTTGGGACTGGGAGAGAAAGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR GCA 90 bp | CTCTCCCAGTCCCAAGCCAACCCATTTTTCCTTGGAATGCAAAAATGGTCTGGATGGTTGCAAGCTCAGTaGCAGTGGCCTCTAGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: LSQSQANPFFLGMQKWSGWLQAQ*QWPLAR Trigger: GCGGGCTAGAGGCCACTGGCACTGAGCTTGCAACCA...TCCAGACCATTTTTGCATTCCAAGGAAAAATGGGTTGGCTTGGGACTGGGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR GCA 90 bp | GTCTGGAAAGAGATATGGGGGTCCTGTGAACAGAACAGGGAGTCATTATCTTTTCGGCGCGGAGCTGCCTaGGGCCGAGGAACAGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: VWKEIWGSCEQNRESLSFRRGAA*GRGTEF Trigger: AAACTCTGTTCCTCGGCCGCAGGCAGCTCCGCGCCG...AAAAGATAATGACTCCCTGTTCTGTTCACAGGACCCCCATATCTCTTTCCAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR GCA 90 bp | CCTTTCTCTCCCAGTCCCAAGCCAACCCATTTTTCCTTGGAATGCAAAAATGGTGCAGCCGCGGCGGGATaGAGAATTCGGGGATGCGAT | + |
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Preference number: 4 (lower is better) Translates to: PFSPSPKPTHFSLECKNGAAAAG*RIRGCD Trigger: ATCGCATCCCCGAATTCTGCATCCCGCCGCGGCTGC...ACCATTTTTGCATTCCAAGGAAAAATGGGTTGGCTTGGGACTGGGAGAGAAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR CCA 90 bp | TTCCTTTCTCTCCCAGTCCCAAGCCAACCCATTTTTCCTTGGAATGCAAAAATGGAGGAGCCGCATCCTTaGAGGCTGGGGCTAGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: FLSLPVPSQPIFPWNAKMEEPHP*RLGLGV Trigger: CACTCCTAGCCCCAGCCTCCAAGGATGCGGCTCCTC...CATTTTTGCATTCCAAGGAAAAATGGGTTGGCTTGGGACTGGGAGAGAAAGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR CCA 90 bp | GAGATATGGGGGTCCTGTGAACAGAACAGGGAGTCATTATCTTTTTCTTCTTTACAAGCTCAGTGCCAGTaGCCTCTAGCCCGCTGCCGA | + |
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Preference number: 4 (lower is better) Translates to: EIWGSCEQNRESLSFSSLQAQCQ*PLARCR Trigger: TCGGCAGCGGGCTAGAGGCCACTGGCACTGAGCTTG...TAAAGAAGAAAAAGATAATGACTCCCTGTTCTGTTCACAGGACCCCCATATCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR CCA 90 bp | ACTTCCTTTCTCTCCCAGTCCCAAGCCAACCCATTTTTCCTTGGAATGCAAAAACAGTGTCTCTGGATCTaGTTGCAAGCTCAGTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: TSFLSQSQANPFFLGMQKQCLWI*LQAQCQ Trigger: CTGGCACTGAGCTTGCAACCAGATCCAGAGACACTG...TTTTTGCATTCCAAGGAAAAATGGGTTGGCTTGGGACTGGGAGAGAAAGGAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR CCA 90 bp | AAACAATGCAGATGGGTGTACTTCCTTTCTCTCCCAGTCCCAAGCCAACCCATTCTTCTTCAGTGTCTCTaGATCTGGTTGCAAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: KQCRWVYFLSLPVPSQPILLQCL*IWLQAQ Trigger: CTGAGCTTGCAACCAGATCCAGAGACACTGAAGAAG...AATGGGTTGGCTTGGGACTGGGAGAGAAAGGAAGTACACCCATCTGCATTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR TCA 90 bp | ACTTCCTTTCTCTCCCAGTCCCAAGCCAACCCATTTTTCCTTGGAATGCAAAAAGATATGGGGGTCCTGTaGACAGAACAGGGAGTCATT | + |
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Preference number: 4 (lower is better) Translates to: TSFLSQSQANPFFLGMQKDMGVL*TEQGVI Trigger: AATGACTCCCTGTTCTGTTCACAGGACCCCCATATC...TTTTTGCATTCCAAGGAAAAATGGGTTGGCTTGGGACTGGGAGAGAAAGGAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR GCA 90 bp | GGAAAGAGATATGGGGGTCCTGTGAACAGAACAGGGAGTCATTATCTTTTTCTTAGTGGCGGGAAGAGGTaGGCCTTTCTCTCTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: GKRYGGPVNRTGSHYLFLSGGKR*AFLSSS Trigger: TGAAGAAGAGAGAAAGGCGCACCTCTTCCCGCCACT...AAGAAAAAGATAATGACTCCCTGTTCTGTTCACAGGACCCCCATATCTCTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR TCA 90 bp | AAACAATGCAGATGGGTGTACTTCCTTTCTCTCCCAGTCCCAAGCCAACCCATTGACAAATGTGGATGGTaGGGAAGTAAAACGTCAATA | + |
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Preference number: 4 (lower is better) Translates to: KQCRWVYFLSLPVPSQPIDKCGW*GSKTSI Trigger: TATTGACGTTTTACTTCCTCACCATCCACATTTGTC...AATGGGTTGGCTTGGGACTGGGAGAGAAAGGAAGTACACCCATCTGCATTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR CCA 90 bp | AAACAATGCAGATGGGTGTACTTCCTTTCTCTCCCAGTCCCAAGCCAACCCATTCAACCCATTTTTCCTTaGAATGCAAAAATGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: KQCRWVYFLSLPVPSQPIQPIFP*NAKMVW Trigger: CCAGACCATTTTTGCATTCCAAGGAAAAATGGGTTG...AATGGGTTGGCTTGGGACTGGGAGAGAAAGGAAGTACACCCATCTGCATTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR TCA 90 bp | AAAATGGTCTGGAAAGAGATATGGGGGTCCTGTGAACAGAACAGGGAGTCATTATTTACCAATAGACGATaGCAAATGTGGATGGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: KMVWKEIWGSCEQNRESLFTNRR*QMWMVR Trigger: CCTCACCATCCACATTTGTCATCGTCTATTGGTAAA...TAATGACTCCCTGTTCTGTTCACAGGACCCCCATATCTCTTTCCAGACCATTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR CCA 90 bp | GAGATATGGGGGTCCTGTGAACAGAACAGGGAGTCATTATCTTTTTCTTCTTTAGTCTGGAAAGAGATATaGGGGTCCTGTGAACAGAAC | + |
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Preference number: 4 (lower is better) Translates to: EIWGSCEQNRESLSFSSLVWKEI*GSCEQN Trigger: GTTCTGTTCACAGGACCCCCATATCTCTTTCCAGAC...TAAAGAAGAAAAAGATAATGACTCCCTGTTCTGTTCACAGGACCCCCATATCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR CCA 90 bp | AAAATGGTCTGGAAAGAGATATGGGGGTCCTGTGAACAGAACAGGGAGTCATTACTTGGAATGCAAAAATaGTCTGGAAAGAGATATGGG | + |
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Preference number: 4 (lower is better) Translates to: KMVWKEIWGSCEQNRESLLGMQK*SGKRYG Trigger: CCCATATCTCTTTCCAGACCATTTTTGCATTCCAAG...TAATGACTCCCTGTTCTGTTCACAGGACCCCCATATCTCTTTCCAGACCATTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS CCA 90 bp | GTCGCTTTCAGCGGCGCAGCGCCGGGGCACGGCGGCGGCCCGGATTaGAGACTCGAGCGTGCAAGGGGCCGGCAGCCGCGGCGGGATGCA | + |
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Preference number: 5 (lower is better) Translates to: VAFSGAAPGHGGGPD*RLERARGRQPRRDA Trigger: TGCATCCCGCCGCGGCTGCCGGCCCCTTGCACGCTCGAGTCTCCAATCCGGGCCGCCGCCGTGCCCCGGCGCTGCGCCGCTGAAAGCGAC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS GCA 90 bp | CGGCGTGAGCACTTTGGCGAAGGCGGGCTTCGGCGCGGAGCTGCCTaGGGCCGAGGAACAGAGTTTCTCGAGGAGCCGCATCCTTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: RREHFGEGGLRRGAA*GRGTEFLEEPHPWR Trigger: CCTCCAAGGATGCGGCTCCTCGAGAAACTCTGTTCCTCGGCCGCAGGCAGCTCCGCGCCGAAGCCCGCCTTCGCCAAAGTGCTCACGCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR CAA 90 bp | ACTTCCTTTCTCTCCCAGTCCCAAGCCAACCCATTTTTCCTTGGAATGCAAAAACGGCGGCGGCCCGGATaGGAGACTCGAGCGTGCAAG | + |
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Preference number: 5 (lower is better) Translates to: TSFLSQSQANPFFLGMQKRRRPG*ETRACK Trigger: CTTGCACGCTCGAGTCTCCAATCCGGGCCGCCGCCG...TTTTTGCATTCCAAGGAAAAATGGGTTGGCTTGGGACTGGGAGAGAAAGGAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR CAA 90 bp | GGAATTAAAAACAATGCAGATGGGTGTACTTCCTTTCTCTCCCAGTCCCAAGCCTTCGGCGTGAGCACTTaGGCGAAGGCGGGCTTCGGC | + |
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Preference number: 5 (lower is better) Translates to: GIKNNADGCTSFLSQSQAFGVST*AKAGFG Trigger: GCCGAAGCCCGCCTTCGCCAAAGTGCTCACGCCGAA...GGCTTGGGACTGGGAGAGAAAGGAAGTACACCCATCTGCATTGTTTTTAATTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR CAA 90 bp | GTCTGGAAAGAGATATGGGGGTCCTGTGAACAGAACAGGGAGTCATTATCTTTTCACCACAGCGCTGCATaGCCAACGCGCAGTGCCCGG | + |
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Preference number: 5 (lower is better) Translates to: VWKEIWGSCEQNRESLSFHHSAA*PTRSAR Trigger: CCGGGCACTGCGCGTTGGCAATGCAGCGCTGTGGTG...AAAAGATAATGACTCCCTGTTCTGTTCACAGGACCCCCATATCTCTTTCCAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR CAA 90 bp | GTCTGGAAAGAGATATGGGGGTCCTGTGAACAGAACAGGGAGTCATTATCTTTTCGAGGAGCCGCATCCTaGGAGGCTGGGGCTAGGAGT | + |
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Preference number: 5 (lower is better) Translates to: VWKEIWGSCEQNRESLSFRGAAS*EAGARS Trigger: ACTCCTAGCCCCAGCCTCCAAGGATGCGGCTCCTCG...AAAAGATAATGACTCCCTGTTCTGTTCACAGGACCCCCATATCTCTTTCCAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR CAA 90 bp | AAACAATGCAGATGGGTGTACTTCCTTTCTCTCCCAGTCCCAAGCCAACCCATTTGTCTCTGGATCTGGTaGCAAGCTCAGTGCCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: KQCRWVYFLSLPVPSQPICLWIW*QAQCQW Trigger: CCACTGGCACTGAGCTTGCAACCAGATCCAGAGACA...AATGGGTTGGCTTGGGACTGGGAGAGAAAGGAAGTACACCCATCTGCATTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS-3UTR CAA 90 bp | GGAATGCAAAAATGGTCTGGAAAGAGATATGGGGGTCCTGTGAACAGAACAGGGCCAACCCATTTTTCCTaGGAATGCAAAAATGGTCTG | + |
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Preference number: 5 (lower is better) Translates to: GMQKWSGKRYGGPVNRTGPTHFS*ECKNGL Trigger: CAGACCATTTTTGCATTCCAAGGAAAAATGGGTTGG...CCCTGTTCTGTTCACAGGACCCCCATATCTCTTTCCAGACCATTTTTGCATTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS CAA 90 bp | GGTCGCTTTCAGCGGCGCAGCGCCGGGGCACGGCGGCGGCCCGGATaGGAGACTCGAGCGTGCAAGGGGCCGGCAGCCGCGGCGGGATGC | + |
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Preference number: 6 (lower is better) Translates to: GRFQRRSAGARRRPG*ETRACKGPAAAAGC Trigger: GCATCCCGCCGCGGCTGCCGGCCCCTTGCACGCTCGAGTCTCCAATCCGGGCCGCCGCCGTGCCCCGGCGCTGCGCCGCTGAAAGCGACC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS GCA 72 bp | GGGGCACGGCGGCGGCCCGGATTGGAGACTCGAGCGTaGAAGGGGCCGGCAGCCGCGGCGGGATGCAGAATT | + |
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Preference number: 6 (lower is better) Translates to: GARRRPGLETRA*KGPAAAAGCRI Trigger: AATTCTGCATCCCGCCGCGGCTGCCGGCCCCTTGCACGCTCGAGTCTCCAATCCGGGCCGCCGCCGTGCCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS CAA 72 bp | ATGCAGAATTCGGGGATGCGATTCGGCGTGAGCACTTaGGCGAAGGCGGGCTTCGGCGCGGAGCTGCCTGCG | + |
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Preference number: 6 (lower is better) Translates to: MQNSGMRFGVST*AKAGFGAELPA Trigger: CGCAGGCAGCTCCGCGCCGAAGCCCGCCTTCGCCAAAGTGCTCACGCCGAATCGCATCCCCGAATTCTGCAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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| CDS CCA 72 bp | CAGTGTCTCTGGATCTGGTTGCAAGCTCAGTGCCAGTaGCCTCTAGCCCGCTGCCGAGGCGCCACCTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: QCLWIWLQAQCQ*PLARCRGATFS Trigger: ACTGAAGGTGGCGCCTCGGCAGCGGGCTAGAGGCCACTGGCACTGAGCTTGCAACCAGATCCAGAGACACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380392.4 |
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