RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C2CD2L (Homo sapiens)

Ensembl gene IDs: ENSG00000172375

Ensembl transcript IDs: ENST00000336702.7, ENST00000525598.1, ENST00000527854.1, ENST00000528271.1, ENST00000528586.2, ENST00000529600.1, ENST00000529874.5, ENST00000529885.1, ENST00000533458.1, ENST00000534024.1, ENST00000648610.2

Found 709 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTTCCCGTTCCAAGTATCCTTCCAACCGGCCCCATGGCCCAGGGTaGACGGGGCTTCCCGGAACCCAGAGGGCTTTCCTGGCCCAGGCA +
Preference number: 1 (lower is better)
Translates to: ASRSKYPSNRPHGPG*TGLPGTQRAFLAQA
Trigger: TGCCTGGGCCAGGAAAGCCCTCTGGGTTCCGGGAAGCCCCGTCCACCCTGGGCCATGGGGCCGGTTGGAAGGATACTTGGAACGGGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR GCA 90 bp CAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCACCTCTCATGTaGTTCCCGTTCCAAGTATCCTTCCAACCGGCCCCATGGCCCAGG +
Preference number: 1 (lower is better)
Translates to: QSLVHVLGTGCPPLM*FPFQVSFQPAPWPR
Trigger: CCTGGGCCATGGGGCCGGTTGGAAGGATACTTGGAACGGGAAGCACATGAGAGGTGGGCACCCGGTGCCGAGGACATGGACGAGGGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR GCA 90 bp GCACCCTGGGACTCCGCTCAGGGACCAGGCTCAGCAGGAGGCAAATaGTTCTGGGGAATACCCACACATGCCGGACAGGGCCCTCCTCTC +
Preference number: 1 (lower is better)
Translates to: APWDSAQGPGSAGGK*FWGIPTHAGQGPPL
Trigger: GAGAGGAGGGCCCTGTCCGGCATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCCCTGAGCGGAGTCCCAGGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR GCA 90 bp CTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTaGCCACCTCTCATGTGCTTCCCGTTCCAAGTATCCTTCCAACCG +
Preference number: 1 (lower is better)
Translates to: LPPSHQSLVHVLGTG*PPLMCFPFQVSFQP
Trigger: CGGTTGGAAGGATACTTGGAACGGGAAGCACATGAGAGGTGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR TCA 90 bp CTTTCGGACACTGGGCGTGGCCGTTGCGTTGGAGAGGTCATCGTGTaGTTGGCTCAGGCCAGCTTCCTTCTGCCTAGGCCTCCGGCGGAA +
Preference number: 1 (lower is better)
Translates to: LSDTGRGRCVGEVIV*LAQASFLLPRPPAE
Trigger: TTCCGCCGGAGGCCTAGGCAGAAGGAAGCTGGCCTGAGCCAATCACACGATGACCTCTCCAACGCAACGGCCACGCCCAGTGTCCGAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528586.2
3UTR CCA 90 bp GAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGTaGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGA +
Preference number: 1 (lower is better)
Translates to: EADTGAGLSGDLREV*EPHPKGNYPPSWDR
Trigger: TCTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR CCA 90 bp AAAAGCTGCCGGCCTTCTTTCGGACACTGGGCGTGGCCGTTGCGTTaGAGAGGTCATCGTGTGATTGGCTCAGGCCAGCTTCCTTCTGCC +
Preference number: 1 (lower is better)
Translates to: KSCRPSFGHWAWPLR*RGHRVIGSGQLPSA
Trigger: GGCAGAAGGAAGCTGGCCTGAGCCAATCACACGATGACCTCTCCAACGCAACGGCCACGCCCAGTGTCCGAAAGAAGGCCGGCAGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528586.2
3UTR CCA 90 bp TGGGCTGAGAGAACTCGTGCCCTTTCAGAGCTGGGTCCTCAGAGCTaGGGGCTGGGGTTACCATTGGCCTTGGGTTTGGATTTGAAGGAA +
Preference number: 1 (lower is better)
Translates to: WAERTRALSELGPQS*GLGLPLALGLDLKE
Trigger: TTCCTTCAAATCCAAACCCAAGGCCAATGGTAACCCCAGCCCCCAGCTCTGAGGACCCAGCTCTGAAAGGGCACGAGTTCTCTCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528586.2
3UTR CCA 90 bp ATCCGGGCCCCTGTCTCATCCTCCCACACCATCCATGTCACAGCCTaGCTGCCTACTGCCTTTCAAAGGATAACCAGTTGTCCAGTTTAT +
Preference number: 1 (lower is better)
Translates to: IRAPVSSSHTIHVTA*LPTAFQRITSCPVY
Trigger: ATAAACTGGACAACTGGTTATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGACATGGATGGTGTGGGAGGATGAGACAGGGGCCCGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR TCA 90 bp GGGACTCAAACCCAGGCAGGCAGTCTAGTTACAGGGTCCAAGCTTTaGTCTCCATTACATCCTAGAAGGAGCAGCCTGTTCCAGAAAGGG +
Preference number: 1 (lower is better)
Translates to: GTQTQAGSLVTGSKL*SPLHPRRSSLFQKG
Trigger: CCCTTTCTGGAACAGGCTGCTCCTTCTAGGATGTAATGGAGATCAAAGCTTGGACCCTGTAACTAGACTGCCTGCCTGGGTTTGAGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR CCA 90 bp TCCCCAAAGGAGAAGTTGCCTGCTCAAGATCACTTGGTTTGTCTGTaGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAA +
Preference number: 1 (lower is better)
Translates to: SPKEKLPAQDHLVCL*QTQFSCFLVLHSAQ
Trigger: TTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAGTGATCTTGAGCAGGCAACTTCTCCTTTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR GCA 90 bp CCTGCTCAAGATCACTTGGTTTGTCTGTGGCAGACTCAGTTTTCTTaGTTCCTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTAC +
Preference number: 1 (lower is better)
Translates to: PAQDHLVCLWQTQFS*FLVLHSAQYPVAAY
Trigger: GTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAGTGATCTTGAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR TCA 90 bp AAGCACGGGAACCAGGGACACAGTTTGCTAGGATCTATCAATCCCTaGAATTTGCCCACATTTCAGAATGAGAGAGCTTTTATTATGTTG +
Preference number: 1 (lower is better)
Translates to: KHGNQGHSLLGSINP*NLPTFQNERAFIML
Trigger: CAACATAATAAAAGCTCTCTCATTCTGAAATGTGGGCAAATTTCAGGGATTGATAGATCCTAGCAAACTGTGTCCCTGGTTCCCGTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR TCA 90 bp GTGTTTTCCAGCAACATGGGTGGAACTGGAGGCCATTATCCTCGGTaGAATAACTCAGAAACAAAGTCAAATATGGCATATTCTCATTTA +
Preference number: 1 (lower is better)
Translates to: VFSSNMGGTGGHYPR*NNSETKSNMAYSHL
Trigger: TAAATGAGAATATGCCATATTTGACTTTGTTTCTGAGTTATTTCACCGAGGATAATGGCCTCCAGTTCCACCCATGTTGCTGGAAAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR CCA 90 bp GAGGCCATTATCCTCGGTGAAATAACTCAGAAACAAAGTCAAATATaGCATATTCTCATTTATAAGTGGGAGCTAAATAATGGGTATACA +
Preference number: 1 (lower is better)
Translates to: EAIILGEITQKQSQI*HILIYKWELNNGYT
Trigger: TGTATACCCATTATTTAGCTCCCACTTATAAATGAGAATATGCCATATTTGACTTTGTTTCTGAGTTATTTCACCGAGGATAATGGCCTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR TCA 90 bp TCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCACCGGTCAGCTGAAGAGCTaGGCACCCTGGGACTCCGCT +
Preference number: 2 (lower is better)
Translates to: SPSQPPVPRPCPRHRVPTGQLKS*APWDSA
Trigger: AGCGGAGTCCCAGGGTGCTCAGCTCTTCAGCTGACC...GGTGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR-3UTR TCA 90 bp CCTCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCAGGAGAGGTCATCGTGTaGTTGGCTCAGGCCAGCTTC +
Preference number: 2 (lower is better)
Translates to: PLPPSHQSLVHVLGTGCPGEVIV*LAQASF
Trigger: GAAGCTGGCCTGAGCCAATCACACGATGACCTCTCC...TGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528586.2
3UTR-3UTR GCA 90 bp GACCTGAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGTCCTCGGCACCGGGTaGCCACCTCTCATGTGCTTC +
Preference number: 2 (lower is better)
Translates to: DLREVWEPHPKGNYPPSWVLGTG*PPLMCF
Trigger: GAAGCACATGAGAGGTGGGCACCCGGTGCCGAGGAC...CCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTCAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR-3UTR GCA 90 bp GAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGAGGCCAGCTTCCTTCTaGCTAGGCCTCCGGCGGAAG +
Preference number: 2 (lower is better)
Translates to: EGGVGAPSQRELPTLLGQRPASF*LGLRRK
Trigger: CTTCCGCCGGAGGCCTAGGCAGAAGGAAGCTGGCCT...CTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528586.2
3UTR-3UTR CCA 90 bp GAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGCCCAGAGGGCTTTCCTaGCCCAGGCACTGGAGATCC +
Preference number: 2 (lower is better)
Translates to: EGGVGAPSQRELPTLLGQPRGLS*PRHWRS
Trigger: GGATCTCCAGTGCCTGGGCCAGGAAAGCCCTCTGGG...CTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR-3UTR TCA 90 bp GAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGGGAAGAAGGGTCAGCTaGAGAGCTGAGCACCCTGGG +
Preference number: 2 (lower is better)
Translates to: EGGVGAPSQRELPTLLGQGRRVS*RAEHPG
Trigger: CCCAGGGTGCTCAGCTCTTCAGCTGACCCTTCTTCC...CTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR-3UTR GCA 90 bp CCTCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCATCAGCAGGAGGCAAATaGTTCTGGGGAATACCCACA +
Preference number: 2 (lower is better)
Translates to: PLPPSHQSLVHVLGTGCPSAGGK*FWGIPT
Trigger: TGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGA...TGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR-3UTR GCA 90 bp ATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGAAGGTGGGGAGTACCTaGCCCCCATCCCGGGCCGGC +
Preference number: 2 (lower is better)
Translates to: IIVSQHTEVQPCVAPSSQKVGST*PPSRAG
Trigger: GCCGGCCCGGGATGGGGGGCAGGTACTCCCCACCTT...CTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR-3UTR CCA 90 bp CTCTGTGAGCTGCCAACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGTTCCAACCGGCCCCATaGCCCAGGGTGGACGGGGCT +
Preference number: 2 (lower is better)
Translates to: LCELPTFSEADTGAGLSGFQPAP*PRVDGA
Trigger: AGCCCCGTCCACCCTGGGCCATGGGGCCGGTTGGAA...CCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGTTGGCAGCTCACAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR-3UTR CCA 90 bp CATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCTTCCAACCGGCCCCATaGCCCAGGGTGGACGGGGCT +
Preference number: 2 (lower is better)
Translates to: HRLPTHRGAALRGSIITVFQPAP*PRVDGA
Trigger: AGCCCCGTCCACCCTGGGCCATGGGGCCGGTTGGAA...GACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR CAA 90 bp GGCGAGAAAAGCTGCCGGCCTTCTTTCGGACACTGGGCGTGGCCGTaGCGTTGGAGAGGTCATCGTGTGATTGGCTCAGGCCAGCTTCCT +
Preference number: 2 (lower is better)
Translates to: GEKSCRPSFGHWAWP*RWRGHRVIGSGQLP
Trigger: AGGAAGCTGGCCTGAGCCAATCACACGATGACCTCTCCAACGCAACGGCCACGCCCAGTGTCCGAAAGAAGGCCGGCAGCTTTTCTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528586.2
3UTR-3UTR TCA 90 bp GAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGAGGTGGGGAATGGGCTaGGAGAACTCGTGCCCTTTC +
Preference number: 2 (lower is better)
Translates to: EGGVGAPSQRELPTLLGQRWGMG*ENSCPF
Trigger: GAAAGGGCACGAGTTCTCTCAGCCCATTCCCCACCT...CTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR-3UTR GCA 90 bp CTCATGTGCTTCCCGTTCCAAGTATCCTTCCAACCGGCCCCATGGCCCAGGGTGGGGAATACCCACACATaGCGGACAGGGCCCTCCTCT +
Preference number: 2 (lower is better)
Translates to: LMCFPFQVSFQPAPWPRVGNTHT*RTGPSS
Trigger: AGAGGAGGGCCCTGTCCGGCATGTGTGGGTATTCCC...CACCCTGGGCCATGGGGCCGGTTGGAAGGATACTTGGAACGGGAAGCACATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR CAA 90 bp GAAAAGCTGCCGGCCTTCTTTCGGACACTGGGCGTGGCCGTTGCGTaGGAGAGGTCATCGTGTGATTGGCTCAGGCCAGCTTCCTTCTGC +
Preference number: 2 (lower is better)
Translates to: EKLPAFFRTLGVAVA*ERSSCDWLRPASFC
Trigger: GCAGAAGGAAGCTGGCCTGAGCCAATCACACGATGACCTCTCCAACGCAACGGCCACGCCCAGTGTCCGAAAGAAGGCCGGCAGCTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528586.2
3UTR-3UTR CCA 90 bp CTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGCCCCATGGCCCAGGGTaGACGGGGCTTCCCGGAACC +
Preference number: 2 (lower is better)
Translates to: LVLHSAQYPVAAYLVQVLPHGPG*TGLPGT
Trigger: GGTTCCGGGAAGCCCCGTCCACCCTGGGCCATGGGG...CAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR TCA 90 bp CATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCGGAAGAAGGGTCAGCTaGAGAGCTGAGCACCCTGGG +
Preference number: 2 (lower is better)
Translates to: HRLPTHRGAALRGSIITVGRRVS*RAEHPG
Trigger: CCCAGGGTGCTCAGCTCTTCAGCTGACCCTTCTTCC...GACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR-3UTR GCA 90 bp CTCAGGGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGGGGAATACCCACACATaGCGGACAGGGCCCTCCTCT +
Preference number: 2 (lower is better)
Translates to: LRDQAQQEANASGEYPHMGNTHT*RTGPSS
Trigger: AGAGGAGGGCCCTGTCCGGCATGTGTGGGTATTCCC...CATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR-3UTR GCA 90 bp ACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGAGAGGCAGACACTGGTaGTGGTCTGAGTGGGGACCT +
Preference number: 2 (lower is better)
Translates to: TFSEADTGAGLSGDLREVRGRHW*WSEWGP
Trigger: AGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCT...CACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR-3UTR GCA 90 bp CTTGGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCAAGGTGGGGAGTACCTaGCCCCCATCCCGGGCCGGC +
Preference number: 2 (lower is better)
Translates to: LGLSVADSVFLLPGPAFCKVGST*PPSRAG
Trigger: GCCGGCCCGGGATGGGGGGCAGGTACTCCCCACCTT...GCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR CCA 90 bp ATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGCCCAGAGGGCTTTCCTaGCCCAGGCACTGGAGATCC +
Preference number: 2 (lower is better)
Translates to: IIVSQHTEVQPCVAPSSQPRGLS*PRHWRS
Trigger: GGATCTCCAGTGCCTGGGCCAGGAAAGCCCTCTGGG...CTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR-3UTR TCA 90 bp CTCTGTGAGCTGCCAACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGAGGTGGGGAATGGGCTaGGAGAACTCGTGCCCTTTC +
Preference number: 2 (lower is better)
Translates to: LCELPTFSEADTGAGLSGRWGMG*ENSCPF
Trigger: GAAAGGGCACGAGTTCTCTCAGCCCATTCCCCACCT...CCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGTTGGCAGCTCACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR-3UTR TCA 90 bp TCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTGGAAGAAGGGTCAGCTaGAGAGCTGAGCACCCTGGG +
Preference number: 2 (lower is better)
Translates to: SSSPNTQRCSLAWLHHHSGRRVS*RAEHPG
Trigger: CCCAGGGTGCTCAGCTCTTCAGCTGACCCTTCTTCC...ACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR-3UTR GCA 90 bp GTCACAGCCTGGCTGCCTACTGCCTTTCAAAGGATAACCAGTTGTCCAGTTTATAAGGTGGGGAGTACCTaGCCCCCATCCCGGGCCGGC +
Preference number: 2 (lower is better)
Translates to: VTAWLPTAFQRITSCPVYKVGST*PPSRAG
Trigger: GCCGGCCCGGGATGGGGGGCAGGTACTCCCCACCTT...ATAAACTGGACAACTGGTTATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR GCA 90 bp CATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCCCCAACACACAGAGGTaGAGCCTTGCGTGGCTCCAT +
Preference number: 2 (lower is better)
Translates to: HRLPTHRGAALRGSIITVPNTQR*SLAWLH
Trigger: ATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGG...GACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR-3UTR CCA 90 bp GATCTCCATTACATCCTAGAAGGAGCAGCCTGTTCCAGAAAGGGGAATGAAGACCCCCATGGCCCAGGGTaGACGGGGCTTCCCGGAACC +
Preference number: 2 (lower is better)
Translates to: DLHYILEGAACSRKGNEDPHGPG*TGLPGT
Trigger: GGTTCCGGGAAGCCCCGTCCACCCTGGGCCATGGGG...GTCTTCATTCCCCTTTCTGGAACAGGCTGCTCCTTCTAGGATGTAATGGAGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR GCA 90 bp ACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGTGCCCACCTCTCATGTaGTTCCCGTTCCAAGTATCC +
Preference number: 2 (lower is better)
Translates to: TFSEADTGAGLSGDLREVCPPLM*FPFQVS
Trigger: GGATACTTGGAACGGGAAGCACATGAGAGGTGGGCA...CACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR-3UTR CCA 90 bp ATCATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCATTCGGACACTGGGCGTaGCCGTTGCGTTGGAGAGGT +
Preference number: 2 (lower is better)
Translates to: IIIVSQHTEVQPCVAPSSFGHWA*PLRWRG
Trigger: ACCTCTCCAACGCAACGGCCACGCCCAGTGTCCGAA...TGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528586.2
3UTR-3UTR GCA 90 bp CTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGGGGAATACCCACACATaGCGGACAGGGCCCTCCTCT +
Preference number: 2 (lower is better)
Translates to: LVLHSAQYPVAAYLVQVLGNTHT*RTGPSS
Trigger: AGAGGAGGGCCCTGTCCGGCATGTGTGGGTATTCCC...CAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR GCA 90 bp ACAGAAAAGAAGGGTCACCTGGGAGAGATGCCCTCTATCATCTGTTCACGGAGGGGCGGCGAGAAAAGCTaGCGGCCTTCTTTCGGACAC +
Preference number: 2 (lower is better)
Translates to: TEKKGHLGEMPSIICSRRGGEKS*RPSFGH
Trigger: GTGTCCGAAAGAAGGCCGGCAGCTTTTCTCGCCGCC...CCTCCGTGAACAGATGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528586.2
3UTR-3UTR CCA 90 bp ACCATTGGCCTTGGGTTTGGATTTGAAGGAAAAGCGCTTGATAAGGCGGCGAGACCCAGAGGGCTTTCCTaGCCCAGGCACTGGAGATCC +
Preference number: 2 (lower is better)
Translates to: TIGLGFGFEGKALDKAARPRGLS*PRHWRS
Trigger: GGATCTCCAGTGCCTGGGCCAGGAAAGCCCTCTGGG...TCTCGCCGCCTTATCAAGCGCTTTTCCTTCAAATCCAAACCCAAGGCCAATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528586.2
3UTR-3UTR CCA 90 bp CTCTGTGAGCTGCCAACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGGAGGCAAATGCTTCTaGGGAATACCCACACATGCC +
Preference number: 2 (lower is better)
Translates to: LCELPTFSEADTGAGLSGGGKCF*GIPTHA
Trigger: GGCATGTGTGGGTATTCCCCAGAAGCATTTGCCTCC...CCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGTTGGCAGCTCACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR-3UTR CCA 90 bp CCCCTTCTTCCCTGCAGGAACTTCTTAGCAGATCCACAATGTGTGTCATCTACCGACCTGAGGGAGGTGTaGGAGCCCCATCCCAAAGGG +
Preference number: 2 (lower is better)
Translates to: PLLPCRNFLADPQCVSSTDLREV*EPHPKG
Trigger: CCCTTTGGGATGGGGCTCCCACACCTCCCTCAGGTC...GGTAGATGACACACATTGTGGATCTGCTAAGAAGTTCCTGCAGGGAAGAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR CCA 90 bp ACAGAAAAGAAGGGTCACCTGGGAGAGATGCCCTCTATCATCTGTTCACGGAGGTGGTGCTGGTCTGAGTaGGGACCTGAGGGAGGTGTG +
Preference number: 2 (lower is better)
Translates to: TEKKGHLGEMPSIICSRRWCWSE*GPEGGV
Trigger: CACACCTCCCTCAGGTCCCCACTCAGACCAGCACCA...CCTCCGTGAACAGATGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR-3UTR CCA 90 bp CTCAGGGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGAGGTCATCGTGTGATTaGCTCAGGCCAGCTTCCTTC +
Preference number: 2 (lower is better)
Translates to: LRDQAQQEANASGEYPHMRSSCD*LRPASF
Trigger: GAAGGAAGCTGGCCTGAGCCAATCACACGATGACCT...CATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528586.2
3UTR-3UTR CCA 90 bp TCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTGCGTGGCCGTTGCGTTaGAGAGGTCATCGTGTGATT +
Preference number: 2 (lower is better)
Translates to: SSSPNTQRCSLAWLHHHSAWPLR*RGHRVI
Trigger: AATCACACGATGACCTCTCCAACGCAACGGCCACGC...ACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528586.2
3UTR-3UTR CCA 90 bp ACAGAAAAGAAGGGTCACCTGGGAGAGATGCCCTCTATCATCTGTTCACGGAGGCCTTCTTTCGGACACTaGGCGTGGCCGTTGCGTTGG +
Preference number: 2 (lower is better)
Translates to: TEKKGHLGEMPSIICSRRPSFGH*AWPLRW
Trigger: CCAACGCAACGGCCACGCCCAGTGTCCGAAAGAAGG...CCTCCGTGAACAGATGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528586.2
3UTR-3UTR TCA 90 bp TCTTCCCTGCAGGAACTTCTTAGCAGATCCACAATGTGTGTCATCTACCCAACCGGTCAGCTGAAGAGCTaGGCACCCTGGGACTCCGCT +
Preference number: 2 (lower is better)
Translates to: SSLQELLSRSTMCVIYPTGQLKS*APWDSA
Trigger: AGCGGAGTCCCAGGGTGCTCAGCTCTTCAGCTGACC...GGTTGGGTAGATGACACACATTGTGGATCTGCTAAGAAGTTCCTGCAGGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR GCA 90 bp TCTTCCCTGCAGGAACTTCTTAGCAGATCCACAATGTGTGTCATCTACCCAACCGTCCTCGGCACCGGGTaGCCACCTCTCATGTGCTTC +
Preference number: 2 (lower is better)
Translates to: SSLQELLSRSTMCVIYPTVLGTG*PPLMCF
Trigger: GAAGCACATGAGAGGTGGGCACCCGGTGCCGAGGAC...GGTTGGGTAGATGACACACATTGTGGATCTGCTAAGAAGTTCCTGCAGGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR GCA 90 bp CTCTGTGAGCTGCCAACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGTCAGCAGGAGGCAAATaGTTCTGGGGAATACCCACA +
Preference number: 2 (lower is better)
Translates to: LCELPTFSEADTGAGLSGSAGGK*FWGIPT
Trigger: TGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGA...CCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGTTGGCAGCTCACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR-3UTR CCA 90 bp TCTTCCCTGCAGGAACTTCTTAGCAGATCCACAATGTGTGTCATCTACCCAACCGACCTGAGGGAGGTGTaGGAGCCCCATCCCAAAGGG +
Preference number: 2 (lower is better)
Translates to: SSLQELLSRSTMCVIYPTDLREV*EPHPKG
Trigger: CCCTTTGGGATGGGGCTCCCACACCTCCCTCAGGTC...GGTTGGGTAGATGACACACATTGTGGATCTGCTAAGAAGTTCCTGCAGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR CCA 90 bp ATCATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACTAAAGCCATCTCTCTaGGGAAGGCTTCCCACCAGG +
Preference number: 2 (lower is better)
Translates to: IIIVSQHTEVQPCVAPSSLKPSL*GRLPTR
Trigger: CCTGGTGGGAAGCCTTCCCCAGAGAGATGGCTTTAG...TGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR-3UTR GCA 90 bp TCCTCCCACACCATCCATGTCACAGCCTGGCTGCCTACTGCCTTTCAAAGGATACTGCTCTCTGTGAGCTaGCAACATTCTCAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: SSHTIHVTAWLPTAFQRILLSVS*QHSQRQ
Trigger: CTGCCTCTGAGAATGTTGGCAGCTCACAGAGAGCAG...TATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGACATGGATGGTGTGGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR CCA 90 bp CATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCAAAAGAAGGGTCACCTaGGAGAGATGCCCTCTATCA +
Preference number: 2 (lower is better)
Translates to: HRLPTHRGAALRGSIITVKRRVT*ERCPLS
Trigger: TGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTT...GACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR-3UTR CCA 90 bp CTCTGTGAGCTGCCAACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGAAAAGAAGGGTCACCTaGGAGAGATGCCCTCTATCA +
Preference number: 2 (lower is better)
Translates to: LCELPTFSEADTGAGLSGKRRVT*ERCPLS
Trigger: TGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTT...CCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGTTGGCAGCTCACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR-3UTR CCA 90 bp AGATCACTTGGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATGGTGCTGGTCTGAGTaGGGACCTGAGGGAGGTGTG +
Preference number: 2 (lower is better)
Translates to: RSLGLSVADSVFLLPGPAWCWSE*GPEGGV
Trigger: CACACCTCCCTCAGGTCCCCACTCAGACCAGCACCA...TGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAGTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR TCA 90 bp TCTTCCCTGCAGGAACTTCTTAGCAGATCCACAATGTGTGTCATCTACCCAACCAGGTGGGGAATGGGCTaGGAGAACTCGTGCCCTTTC +
Preference number: 2 (lower is better)
Translates to: SSLQELLSRSTMCVIYPTRWGMG*ENSCPF
Trigger: GAAAGGGCACGAGTTCTCTCAGCCCATTCCCCACCT...GGTTGGGTAGATGACACACATTGTGGATCTGCTAAGAAGTTCCTGCAGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR TCA 90 bp TATGAGGAAACTGAGGTCCCCAAAGGAGAAGTTGCCTGCTCAAGATCACTTGGTCGGCCCTGCTCTCTGTaGGCTGCCAACATTCTCAGA +
Preference number: 2 (lower is better)
Translates to: YEETEVPKGEVACSRSLGRPCSL*AANILR
Trigger: TCTGAGAATGTTGGCAGCTCACAGAGAGCAGGGCCG...ACCAAGTGATCTTGAGCAGGCAACTTCTCCTTTGGGGACCTCAGTTTCCTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR GCA 90 bp TCCTCCCACACCATCCATGTCACAGCCTGGCTGCCTACTGCCTTTCAAAGGATATCAGCAGGAGGCAAATaGTTCTGGGGAATACCCACA +
Preference number: 2 (lower is better)
Translates to: SSHTIHVTAWLPTAFQRISAGGK*FWGIPT
Trigger: TGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGA...TATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGACATGGATGGTGTGGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR GCA 90 bp CAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCCCAACACACAGAGGTaGAGCCTTGCGTGGCTCCAT +
Preference number: 2 (lower is better)
Translates to: QFSCFLVLHSAQYPVAAYPNTQR*SLAWLH
Trigger: ATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGG...GTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR CCA 90 bp CTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGGGAGGCAAATGCTTCTaGGGAATACCCACACATGCC +
Preference number: 2 (lower is better)
Translates to: LVLHSAQYPVAAYLVQVLGGKCF*GIPTHA
Trigger: GGCATGTGTGGGTATTCCCCAGAAGCATTTGCCTCC...CAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR CCA 90 bp TATGAGGAAACTGAGGTCCCCAAAGGAGAAGTTGCCTGCTCAAGATCACTTGGTCTAAAGCCATCTCTCTaGGGAAGGCTTCCCACCAGG +
Preference number: 2 (lower is better)
Translates to: YEETEVPKGEVACSRSLGLKPSL*GRLPTR
Trigger: CCTGGTGGGAAGCCTTCCCCAGAGAGATGGCTTTAG...ACCAAGTGATCTTGAGCAGGCAACTTCTCCTTTGGGGACCTCAGTTTCCTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR CAA 90 bp ACTGAGGTCCCCAAAGGAGAAGTTGCCTGCTCAAGATCACTTGGTTaGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTC +
Preference number: 2 (lower is better)
Translates to: TEVPKGEVACSRSLG*SVADSVFLLPGPAF
Trigger: GAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAGTGATCTTGAGCAGGCAACTTCTCCTTTGGGGACCTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR CAA 90 bp AGGAAACTGAGGTCCCCAAAGGAGAAGTTGCCTGCTCAAGATCACTaGGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTG +
Preference number: 2 (lower is better)
Translates to: RKLRSPKEKLPAQDH*VCLWQTQFSCFLVL
Trigger: CAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAGTGATCTTGAGCAGGCAACTTCTCCTTTGGGGACCTCAGTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR GCA 90 bp GTCACAGCCTGGCTGCCTACTGCCTTTCAAAGGATAACCAGTTGTCCAGTTTATTGCCCACCTCTCATGTaGTTCCCGTTCCAAGTATCC +
Preference number: 2 (lower is better)
Translates to: VTAWLPTAFQRITSCPVYCPPLM*FPFQVS
Trigger: GGATACTTGGAACGGGAAGCACATGAGAGGTGGGCA...ATAAACTGGACAACTGGTTATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR GCA 90 bp GTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGTATTGCCCACCTCTCATGTaGTTCCCGTTCCAAGTATCC +
Preference number: 2 (lower is better)
Translates to: VLHSAQYPVAAYLVQVLYCPPLM*FPFQVS
Trigger: GGATACTTGGAACGGGAAGCACATGAGAGGTGGGCA...ATACAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR GCA 90 bp TGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATCTGCTCTCTGTGAGCTaGCAACATTCTCAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: CLWQTQFSCFLVLHSAQYLLSVS*QHSQRQ
Trigger: CTGCCTCTGAGAATGTTGGCAGCTCACAGAGAGCAG...ATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR CAA 90 bp GCCTGCTCAAGATCACTTGGTTTGTCTGTGGCAGACTCAGTTTTCTaGCTTCCTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTA +
Preference number: 2 (lower is better)
Translates to: ACSRSLGLSVADSVF*LPGPAFCPISCSSL
Trigger: TAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAGTGATCTTGAGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR GCA 90 bp TGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATATGTCACAGCCTGGCTaGCTACTGCCTTTCAAAGGA +
Preference number: 2 (lower is better)
Translates to: CLWQTQFSCFLVLHSAQYMSQPG*LLPFKG
Trigger: TCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGACAT...ATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR GCA 90 bp CTTGGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCACACCCCTTCTTCCCTaGAGGAACTTCTTAGCAGAT +
Preference number: 2 (lower is better)
Translates to: LGLSVADSVFLLPGPAFCTPLLP*RNFLAD
Trigger: ATCTGCTAAGAAGTTCCTGCAGGGAAGAAGGGGTGT...GCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR CCA 90 bp CTTGGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCAATTACCCACCCTCCTaGGACAGAAAAGAAGGGTCA +
Preference number: 2 (lower is better)
Translates to: LGLSVADSVFLLPGPAFCNYPPS*DRKEGS
Trigger: TGACCCTTCTTTTCTGTCCCAGGAGGGTGGGTAATT...GCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR CCA 90 bp GATCTCCATTACATCCTAGAAGGAGCAGCCTGTTCCAGAAAGGGGAATGAAGACAATTACCCACCCTCCTaGGACAGAAAAGAAGGGTCA +
Preference number: 2 (lower is better)
Translates to: DLHYILEGAACSRKGNEDNYPPS*DRKEGS
Trigger: TGACCCTTCTTTTCTGTCCCAGGAGGGTGGGTAATT...GTCTTCATTCCCCTTTCTGGAACAGGCTGCTCCTTCTAGGATGTAATGGAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR TCA 90 bp GTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGTATGGATCTATCAATCCCTaGAATTTGCCCACATTTCAG +
Preference number: 2 (lower is better)
Translates to: VLHSAQYPVAAYLVQVLYGSINP*NLPTFQ
Trigger: CTGAAATGTGGGCAAATTTCAGGGATTGATAGATCC...ATACAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR TCA 90 bp TGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATGGATCTATCAATCCCTaGAATTTGCCCACATTTCAG +
Preference number: 2 (lower is better)
Translates to: CLWQTQFSCFLVLHSAQYGSINP*NLPTFQ
Trigger: CTGAAATGTGGGCAAATTTCAGGGATTGATAGATCC...ATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR CAA 90 bp ACCCTTATTTTAGATATGAGGAAACTGAGGTCCCCAAAGGAGAAGTaGCCTGCTCAAGATCACTTGGTTTGTCTGTGGCAGACTCAGTTT +
Preference number: 2 (lower is better)
Translates to: TLILDMRKLRSPKEK*PAQDHLVCLWQTQF
Trigger: AAACTGAGTCTGCCACAGACAAACCAAGTGATCTTGAGCAGGCAACTTCTCCTTTGGGGACCTCAGTTTCCTCATATCTAAAATAAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR CCA 72 bp GGTGGACGGGGCTTCCCGGAACCCAGAGGGCTTTCCTaGCCCAGGCACTGGAGATCCAGGAAGGGGTATGGA +
Preference number: 3 (lower is better)
Translates to: GGRGFPEPRGLS*PRHWRSRKGYG
Trigger: TCCATACCCCTTCCTGGATCTCCAGTGCCTGGGCCAGGAAAGCCCTCTGGGTTCCGGGAAGCCCCGTCCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR CCA 72 bp TCCAAGTATCCTTCCAACCGGCCCCATGGCCCAGGGTaGACGGGGCTTCCCGGAACCCAGAGGGCTTTCCTG +
Preference number: 3 (lower is better)
Translates to: SKYPSNRPHGPG*TGLPGTQRAFL
Trigger: CAGGAAAGCCCTCTGGGTTCCGGGAAGCCCCGTCCACCCTGGGCCATGGGGCCGGTTGGAAGGATACTTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR CCA 72 bp GGCGGCGAGAAAAGCTGCCGGCCTTCTTTCGGACACTaGGCGTGGCCGTTGCGTTGGAGAGGTCATCGTGTG +
Preference number: 3 (lower is better)
Translates to: GGEKSCRPSFGH*AWPLRWRGHRV
Trigger: CACACGATGACCTCTCCAACGCAACGGCCACGCCCAGTGTCCGAAAGAAGGCCGGCAGCTTTTCTCGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528586.2
3UTR GCA 72 bp GTCCATGTCCTCGGCACCGGGTGCCCACCTCTCATGTaGTTCCCGTTCCAAGTATCCTTCCAACCGGCCCCA +
Preference number: 3 (lower is better)
Translates to: VHVLGTGCPPLM*FPFQVSFQPAP
Trigger: TGGGGCCGGTTGGAAGGATACTTGGAACGGGAAGCACATGAGAGGTGGGCACCCGGTGCCGAGGACATGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR CCA 72 bp CGGCCTTCTTTCGGACACTGGGCGTGGCCGTTGCGTTaGAGAGGTCATCGTGTGATTGGCTCAGGCCAGCTT +
Preference number: 3 (lower is better)
Translates to: RPSFGHWAWPLR*RGHRVIGSGQL
Trigger: AAGCTGGCCTGAGCCAATCACACGATGACCTCTCCAACGCAACGGCCACGCCCAGTGTCCGAAAGAAGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528586.2
3UTR CCA 72 bp GAGAAAAGCTGCCGGCCTTCTTTCGGACACTGGGCGTaGCCGTTGCGTTGGAGAGGTCATCGTGTGATTGGC +
Preference number: 3 (lower is better)
Translates to: EKSCRPSFGHWA*PLRWRGHRVIG
Trigger: GCCAATCACACGATGACCTCTCCAACGCAACGGCCACGCCCAGTGTCCGAAAGAAGGCCGGCAGCTTTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528586.2
3UTR-3UTR CAA 90 bp TCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCACTGGGCGTGGCCGTaGCGTTGGAGAGGTCATCGT +
Preference number: 3 (lower is better)
Translates to: SSSPNTQRCSLAWLHHHSHWAWP*RWRGHR
Trigger: ACGATGACCTCTCCAACGCAACGGCCACGCCCAGTG...ACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528586.2
3UTR-3UTR CAA 90 bp GGTTTGGATTTGAAGGAAAAGCGCTTGATAAGGCGGCGAGAAAAGCTGCCGGCCGGCGTGGCCGTTGCGTaGGAGAGGTCATCGTGTGAT +
Preference number: 3 (lower is better)
Translates to: GLDLKEKRLIRRREKLPAGVAVA*ERSSCD
Trigger: ATCACACGATGACCTCTCCAACGCAACGGCCACGCC...GGCCGGCAGCTTTTCTCGCCGCCTTATCAAGCGCTTTTCCTTCAAATCCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528586.2
3UTR-3UTR CAA 90 bp CTCATGTGCTTCCCGTTCCAAGTATCCTTCCAACCGGCCCCATGGCCCAGGGTGCCATTGGCCTTGGGTTaGGATTTGAAGGAAAAGCGC +
Preference number: 3 (lower is better)
Translates to: LMCFPFQVSFQPAPWPRVPLALG*DLKEKR
Trigger: GCGCTTTTCCTTCAAATCCAAACCCAAGGCCAATGG...CACCCTGGGCCATGGGGCCGGTTGGAAGGATACTTGGAACGGGAAGCACATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528586.2
3UTR CCA 72 bp TTACCCACCCTCCTGGGACAGAAAAGAAGGGTCACCTaGGAGAGATGCCCTCTATCATCTGTTCACGGAGGG +
Preference number: 3 (lower is better)
Translates to: LPTLLGQKRRVT*ERCPLSSVHGG
Trigger: CCCTCCGTGAACAGATGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTTCTGTCCCAGGAGGGTGGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR-3UTR CAA 90 bp TTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGTGGGCCTTGGGTTTGGATTaGAAGGAAAAGCGCTTGATA +
Preference number: 3 (lower is better)
Translates to: FSEADTGAGLSGDLREVWALGLD*KEKRLI
Trigger: TATCAAGCGCTTTTCCTTCAAATCCAAACCCAAGGC...CCACACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528586.2
3UTR-3UTR CAA 90 bp GCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGAAAAGAAGGGTCACCTTGAAGGAAAAGCGCTaGATAAGGCGGCGAGAAAAG +
Preference number: 3 (lower is better)
Translates to: APSQRELPTLLGQKRRVTLKEKR*IRRREK
Trigger: CTTTTCTCGCCGCCTTATCAAGCGCTTTTCCTTCAA...GGTGACCCTTCTTTTCTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000528586.2
3UTR-3UTR CAA 90 bp CATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCGGGTTACCATTGGCCTaGGGTTTGGATTTGAAGGAA +
Preference number: 3 (lower is better)
Translates to: HRLPTHRGAALRGSIITVGLPLA*GLDLKE
Trigger: TTCCTTCAAATCCAAACCCAAGGCCAATGGTAACCC...GACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528586.2
3UTR CCA 72 bp CCTGTCTCATCCTCCCACACCATCCATGTCACAGCCTaGCTGCCTACTGCCTTTCAAAGGATAACCAGTTGT +
Preference number: 3 (lower is better)
Translates to: PVSSSHTIHVTA*LPTAFQRITSC
Trigger: ACAACTGGTTATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGACATGGATGGTGTGGGAGGATGAGACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR TCA 72 bp ACCCAGGCAGGCAGTCTAGTTACAGGGTCCAAGCTTTaGTCTCCATTACATCCTAGAAGGAGCAGCCTGTTC +
Preference number: 3 (lower is better)
Translates to: TQAGSLVTGSKL*SPLHPRRSSLF
Trigger: GAACAGGCTGCTCCTTCTAGGATGTAATGGAGATCAAAGCTTGGACCCTGTAACTAGACTGCCTGCCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR CCA 72 bp GGTCCCCAAAGGAGAAGTTGCCTGCTCAAGATCACTTaGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTCC +
Preference number: 3 (lower is better)
Translates to: GPQRRSCLLKIT*FVCGRLSFLAS
Trigger: GGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAGTGATCTTGAGCAGGCAACTTCTCCTTTGGGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR GCA 72 bp TATGAGGAAACTGAGGTCCCCAAAGGAGAAGTTGCCTaGTCAAGATCACTTGGTTTGTCTGTGGCAGACTCA +
Preference number: 3 (lower is better)
Translates to: YEETEVPKGEVA*SRSLGLSVADS
Trigger: TGAGTCTGCCACAGACAAACCAAGTGATCTTGAGCAGGCAACTTCTCCTTTGGGGACCTCAGTTTCCTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR CCA 72 bp GAGAAGTTGCCTGCTCAAGATCACTTGGTTTGTCTGTaGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCAT +
Preference number: 3 (lower is better)
Translates to: EKLPAQDHLVCL*QTQFSCFLVLH
Trigger: ATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAGTGATCTTGAGCAGGCAACTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR-3UTR CAA 90 bp CAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACAACCAGGGACACAGTTaGCTAGGATCTATCAATCCC +
Preference number: 3 (lower is better)
Translates to: QFSCFLVLHSAQYPVAAYNQGHS*LGSINP
Trigger: GGGATTGATAGATCCTAGCAAACTGTGTCCCTGGTT...GTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR GCA 72 bp GATCACTTGGTTTGTCTGTGGCAGACTCAGTTTTCTTaGTTCCTGGTCCTGCATTCTGCCCAATATCCTGTA +
Preference number: 3 (lower is better)
Translates to: DHLVCLWQTQFS*FLVLHSAQYPV
Trigger: TACAGGATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR GCA 72 bp TGGACAGGAGCATGGGGAATAGTAACAATTTCCACATaGTATCTACCCAAAGGCATGTGCCCTAAACACCCT +
Preference number: 3 (lower is better)
Translates to: WTGAWGIVTIST*YLPKGMCPKHP
Trigger: AGGGTGTTTAGGGCACATGCCTTTGGGTAGATAGCATGTGGAAATTGTTACTATTCCCCATGCTCCTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR TCA 72 bp TATACCCTCCATTCTTCCCGGATATCTCATATTTGGTaGGTAGTGTGGACAGGAGCATGGGGAATAGTAACA +
Preference number: 3 (lower is better)
Translates to: YTLHSSRISHIW*VVWTGAWGIVT
Trigger: TGTTACTATTCCCCATGCTCCTGTCCACACTACTCACCAAATATGAGATATCCGGGAAGAATGGAGGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR TCA 72 bp TGCCCACATTTCAGAATGAGAGAGCTTTTATTATGTTaGAACACTTCTAAGACTTCCCCCTCCCAGTTTCTT +
Preference number: 3 (lower is better)
Translates to: CPHFRMRELLLC*NTSKTSPSQFL
Trigger: AAGAAACTGGGAGGGGGAAGTCTTAGAAGTGTTTCAACATAATAAAAGCTCTCTCATTCTGAAATGTGGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR TCA 72 bp ATAGGTAGTCATAGAATGTCAAGGCTGGAAGTGACCTaGATGTTTATCCAGGTCACCCTTATTTTAGATATG +
Preference number: 3 (lower is better)
Translates to: IGSHRMSRLEVT*MFIQVTLILDM
Trigger: CATATCTAAAATAAGGGTGACCTGGATAAACATTCAGGTCACTTCCAGCCTTGACATTCTATGACTACCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp CCTCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCAGGCCCCGCCGGACCCTaGAGGGGACTGGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PLPPSHQSLVHVLGTGCPGPAGP*RGLVCR
Trigger: TCTGCAGACCAGTCCCCTCCAGGGTCCGGCGGGGCC...TGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp CCTCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCACCCCATGGCCCAGGGTaGACGGGGCTTCCCGGAACC +
Preference number: 4 (lower is better)
Translates to: PLPPSHQSLVHVLGTGCPPHGPG*TGLPGT
Trigger: GGTTCCGGGAAGCCCCGTCCACCCTGGGCCATGGGG...TGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp TCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCACCGTCAGCTCCCGGCTCTaGGGGCCCAGATCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: SPSQPPVPRPCPRHRVPTVSSRL*GPRSSA
Trigger: GGCACTGGATCTGGGCCCCCAGAGCCGGGAGCTGAC...GGTGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp TCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCACCTGGCCACCCGCCCACTaGGCTCTGTCAGCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: SPSQPPVPRPCPRHRVPTWPPAH*ALSAGE
Trigger: TTCGCCAGCTGACAGAGCCCAGTGGGCGGGTGGCCA...GGTGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp TCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCACCCACTGCCATGGTGGCTaGTGGTCCCAGGGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: SPSQPPVPRPCPRHRVPTHCHGG*WSQGFP
Trigger: GGGAAAGCCCTGGGACCAGCAGCCACCATGGCAGTG...GGTGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CCTCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCAAGCCCACAGGCAGTGTaGCCTGGCCTAGGAGTTCGG +
Preference number: 4 (lower is better)
Translates to: PLPPSHQSLVHVLGTGCPSPQAV*PGLGVR
Trigger: CCGAACTCCTAGGCCAGGCCACACTGCCTGTGGGCT...TGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp TCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCACCCCCAGAGGGCTTTCCTaGCCCAGGCACTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: SPSQPPVPRPCPRHRVPTPRGLS*PRHWRS
Trigger: GGATCTCCAGTGCCTGGGCCAGGAAAGCCCTCTGGG...GGTGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp CCTCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCAAAGCCCCGGGCATATTaGAGCAGCCAGGCGAACACC +
Preference number: 4 (lower is better)
Translates to: PLPPSHQSLVHVLGTGCPKPRAY*SSQANT
Trigger: GGTGTTCGCCTGGCTGCTGCAATATGCCCGGGGCTT...TGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp CCTCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCAGGGGCCCAGATCCAGTaGCAGGTCTTCTGTCCACTC +
Preference number: 4 (lower is better)
Translates to: PLPPSHQSLVHVLGTGCPGAQIQ*QVFCPL
Trigger: GAGTGGACAGAAGACCTGGCACTGGATCTGGGCCCC...TGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp GGCGAGAAAAGCTGCCGGCCTTCTTTCGGACACTGGGCGTGGCCGTTGCGTTGGTTCCAACCGGCCCCATaGCCCAGGGTGGACGGGGCT +
Preference number: 4 (lower is better)
Translates to: GEKSCRPSFGHWAWPLRWFQPAP*PRVDGA
Trigger: AGCCCCGTCCACCCTGGGCCATGGGGCCGGTTGGAA...CCAACGCAACGGCCACGCCCAGTGTCCGAAAGAAGGCCGGCAGCTTTTCTCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR TCA 90 bp GACCTGAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGCCAGGCGAACACCGTaGGCAGCGAGGCGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: DLREVWEPHPKGNYPPSWARRTP*AARRRR
Trigger: TCTTCGCCGCCTCGCTGCTCACGGTGTTCGCCTGGC...CCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTCAGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp GAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGGCCAGGCGAACACCGTaGGCAGCGAGGCGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: EGGVGAPSQRELPTLLGQARRTP*AARRRR
Trigger: TCTTCGCCGCCTCGCTGCTCACGGTGTTCGCCTGGC...CTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp ATAAGGGAAGAAGGGTCAGCTGAAGAGCTGAGCACCCTGGGACTCCGCTCAGGGGGTCTGCAGAGACGCTaGGGCTCGCGGGCCGGCACC +
Preference number: 4 (lower is better)
Translates to: IREEGSAEELSTLGLRSGGLQRR*GSRAGT
Trigger: GGTGCCGGCCCGCGAGCCCCAGCGTCTCTGCAGACC...CCCTGAGCGGAGTCCCAGGGTGCTCAGCTCTTCAGCTGACCCTTCTTCCCTTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp CCTCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCATGGCCCTGGGGTGAGTaGGCACAACTGTCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: PLPPSHQSLVHVLGTGCPWPWGE*AQLSSR
Trigger: TCTCGAAGACAGTTGTGCCCACTCACCCCAGGGCCA...TGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR TCA 90 bp GGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCCGGAGGGGCTCTCCGCGGCTaGGTGCCCAGGACTAGTGGG +
Preference number: 4 (lower is better)
Translates to: GPGSAGGKCFWGIPTHAGGALRG*VPRTSG
Trigger: CCCACTAGTCCTGGGCACTCAGCCGCGGAGAGCCCC...TCCGGCATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp ACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGGGGGCTCTCCGCGGCTaGGTGCCCAGGACTAGTGGG +
Preference number: 4 (lower is better)
Translates to: TFSEADTGAGLSGDLREVGALRG*VPRTSG
Trigger: CCCACTAGTCCTGGGCACTCAGCCGCGGAGAGCCCC...CACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp CTCATGTGCTTCCCGTTCCAAGTATCCTTCCAACCGGCCCCATGGCCCAGGGTGTTAGTCGCCGGCCAGTaGCCGACTCCTCCCACCGCG +
Preference number: 4 (lower is better)
Translates to: LMCFPFQVSFQPAPWPRVLVAGQ*PTPPTA
Trigger: CGCGGTGGGAGGAGTCGGGCACTGGCCGGCGACTAA...CACCCTGGGCCATGGGGCCGGTTGGAAGGATACTTGGAACGGGAAGCACATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp GGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCCGGACCCAGCCCGGATCCATaGTCCGCGCGGGCTCCGATC +
Preference number: 4 (lower is better)
Translates to: GPGSAGGKCFWGIPTHAGPSPDP*SARAPI
Trigger: GATCGGAGCCCGCGCGGAGCATGGATCCGGGCTGGG...TCCGGCATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp TCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCACCGGCTTGGTCCACTTCTaGTGCATGGGGTTGTCGAGT +
Preference number: 4 (lower is better)
Translates to: SPSQPPVPRPCPRHRVPTGLVHF*CMGLSS
Trigger: ACTCGACAACCCCATGCAGCAGAAGTGGACCAAGCC...GGTGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp CCTCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCAGGCTTGGTCCACTTCTaGTGCATGGGGTTGTCGAGT +
Preference number: 4 (lower is better)
Translates to: PLPPSHQSLVHVLGTGCPGLVHF*CMGLSS
Trigger: ACTCGACAACCCCATGCAGCAGAAGTGGACCAAGCC...TGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp TCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCACCATAGTGAAGCTCCACTaGCATGGTGGCTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SPSQPPVPRPCPRHRVPTIVKLH*HGGCWS
Trigger: GGACCAGCAGCCACCATGGCAGTGGAGCTTCACTAT...GGTGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp TCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCACCGTCCCTGCATCATCCTaGACTGAGGCTTCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: SPSQPPVPRPCPRHRVPTVPASS*TEASRD
Trigger: ATCCCTGGAAGCCTCAGTGCAGGATGATGCAGGGAC...GGTGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp ATAAGGGAAGAAGGGTCAGCTGAAGAGCTGAGCACCCTGGGACTCCGCTCAGGGAAGGTGGGGAGTACCTaGCCCCCATCCCGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: IREEGSAEELSTLGLRSGKVGST*PPSRAG
Trigger: GCCGGCCCGGGATGGGGGGCAGGTACTCCCCACCTT...CCCTGAGCGGAGTCCCAGGGTGCTCAGCTCTTCAGCTGACCCTTCTTCCCTTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CTCATGTGCTTCCCGTTCCAAGTATCCTTCCAACCGGCCCCATGGCCCAGGGTGTTCCAACCGGCCCCATaGCCCAGGGTGGACGGGGCT +
Preference number: 4 (lower is better)
Translates to: LMCFPFQVSFQPAPWPRVFQPAP*PRVDGA
Trigger: AGCCCCGTCCACCCTGGGCCATGGGGCCGGTTGGAA...CACCCTGGGCCATGGGGCCGGTTGGAAGGATACTTGGAACGGGAAGCACATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CCTCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCACTAAAGCCATCTCTCTaGGGAAGGCTTCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: PLPPSHQSLVHVLGTGCPLKPSL*GRLPTR
Trigger: CCTGGTGGGAAGCCTTCCCCAGAGAGATGGCTTTAG...TGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR TCA 90 bp AGGCGGCGAGAAAAGCTGCCGGCCTTCTTTCGGACACTGGGCGTGGCCGTTGCGAGGTGGGGAATGGGCTaGGAGAACTCGTGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: RRREKLPAFFRTLGVAVARWGMG*ENSCPF
Trigger: GAAAGGGCACGAGTTCTCTCAGCCCATTCCCCACCT...CGCAACGGCCACGCCCAGTGTCCGAAAGAAGGCCGGCAGCTTTTCTCGCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR TCA 90 bp AGGCGGCGAGAAAAGCTGCCGGCCTTCTTTCGGACACTGGGCGTGGCCGTTGCGAGAGGGGAAGCTTTGTaGTCCTTGAGGCTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: RRREKLPAFFRTLGVAVARGEAL*SLRLRV
Trigger: GACCCGCAGCCTCAAGGATCACAAAGCTTCCCCTCT...CGCAACGGCCACGCCCAGTGTCCGAAAGAAGGCCGGCAGCTTTTCTCGCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR GCA 90 bp CTCATGTGCTTCCCGTTCCAAGTATCCTTCCAACCGGCCCCATGGCCCAGGGTGTGGAGGGGACTGGTCTaGAGAGACGCTGGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: LMCFPFQVSFQPAPWPRVWRGLV*RDAGAR
Trigger: GCGAGCCCCAGCGTCTCTGCAGACCAGTCCCCTCCA...CACCCTGGGCCATGGGGCCGGTTGGAAGGATACTTGGAACGGGAAGCACATGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp CTCATGTGCTTCCCGTTCCAAGTATCCTTCCAACCGGCCCCATGGCCCAGGGTGCTCTCCGCGGCTGAGTaGCCAGGACTAGTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LMCFPFQVSFQPAPWPRVLSAAE*PGLVGA
Trigger: GGCACCCACTAGTCCTGGGCACTCAGCCGCGGAGAG...CACCCTGGGCCATGGGGCCGGTTGGAAGGATACTTGGAACGGGAAGCACATGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp GGCGAGAAAAGCTGCCGGCCTTCTTTCGGACACTGGGCGTGGCCGTTGCGTTGGGGGAATACCCACACATaGCGGACAGGGCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GEKSCRPSFGHWAWPLRWGNTHT*RTGPSS
Trigger: AGAGGAGGGCCCTGTCCGGCATGTGTGGGTATTCCC...CCAACGCAACGGCCACGCCCAGTGTCCGAAAGAAGGCCGGCAGCTTTTCTCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR GCA 90 bp TCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCACCCTTCCATCCTTTCTCTaGACACCCCTTCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: SPSQPPVPRPCPRHRVPTLPSFL*TPLLPC
Trigger: GCAGGGAAGAAGGGGTGTGCAGAGAAAGGATGGAAG...GGTGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp GGCGAGAAAAGCTGCCGGCCTTCTTTCGGACACTGGGCGTGGCCGTTGCGTTGGGGCTGTCCCGGCTGCTaGTATGGGAGGTATTGCTGG +
Preference number: 4 (lower is better)
Translates to: GEKSCRPSFGHWAWPLRWGCPGC*YGRYCW
Trigger: CCAGCAATACCTCCCATAGCAGCAGCCGGGACAGCC...CCAACGCAACGGCCACGCCCAGTGTCCGAAAGAAGGCCGGCAGCTTTTCTCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR CCA 90 bp CCTCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCACAAAGGCGATTTGGATaGAGCTCCCGTTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PLPPSHQSLVHVLGTGCPQRRFG*SSRFCR
Trigger: CCTGCAGAAACGGGAGCTCCATCCAAATCGCCTTTG...TGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp GACCTGAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGCAGCCCTCGCGGGCTTaGTCCACTTCTGCTGCATGG +
Preference number: 4 (lower is better)
Translates to: DLREVWEPHPKGNYPPSWQPSRA*STSAAW
Trigger: CCATGCAGCAGAAGTGGACCAAGCCCGCGAGGGCTG...CCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTCAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp GGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCCGGAGTCAGCTCCCGGCTCTaGGGGCCCAGATCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GPGSAGGKCFWGIPTHAGVSSRL*GPRSSA
Trigger: GGCACTGGATCTGGGCCCCCAGAGCCGGGAGCTGAC...TCCGGCATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp GAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGAGCCCACAGGCAGTGTaGCCTGGCCTAGGAGTTCGG +
Preference number: 4 (lower is better)
Translates to: EGGVGAPSQRELPTLLGQSPQAV*PGLGVR
Trigger: CCGAACTCCTAGGCCAGGCCACACTGCCTGTGGGCT...CTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp GACCTGAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGTGGAGTGGAGGAGGTaGGAGTACCCAGGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: DLREVWEPHPKGNYPPSWVEWRR*EYPGSG
Trigger: CCCGGAACCTGGGTACTCCCACCTCCTCCACTCCAC...CCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTCAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp GGCGAGAAAAGCTGCCGGCCTTCTTTCGGACACTGGGCGTGGCCGTTGCGTTGGTGTGATGCTGGGGCGTaGAGTGGAGGAGGTGGGAGT +
Preference number: 4 (lower is better)
Translates to: GEKSCRPSFGHWAWPLRWCDAGA*SGGGGS
Trigger: ACTCCCACCTCCTCCACTCCACGCCCCAGCATCACA...CCAACGCAACGGCCACGCCCAGTGTCCGAAAGAAGGCCGGCAGCTTTTCTCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR CCA 90 bp GACCTGAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGTGGTGGGTGTCTTCTTaGCCACCCGCCCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: DLREVWEPHPKGNYPPSWWWVSS*PPAHWA
Trigger: AGCCCAGTGGGCGGGTGGCCAAGAAGACACCCACCA...CCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTCAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CTCTGTGAGCTGCCAACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGCCCCATGGCCCAGGGTaGACGGGGCTTCCCGGAACC +
Preference number: 4 (lower is better)
Translates to: LCELPTFSEADTGAGLSGPHGPG*TGLPGT
Trigger: GGTTCCGGGAAGCCCCGTCCACCCTGGGCCATGGGG...CCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGTTGGCAGCTCACAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CCTCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCAGGAGGCAAATGCTTCTaGGGAATACCCACACATGCC +
Preference number: 4 (lower is better)
Translates to: PLPPSHQSLVHVLGTGCPGGKCF*GIPTHA
Trigger: GGCATGTGTGGGTATTCCCCAGAAGCATTTGCCTCC...TGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR TCA 90 bp GAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGTGCTCCTCAGCACTTTaGGGGTCAGCTCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: EGGVGAPSQRELPTLLGQCSSAL*GSAPGS
Trigger: AGAGCCGGGAGCTGACCCTCAAAGTGCTGAGGAGCA...CTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR TCA 90 bp CTCATGTGCTTCCCGTTCCAAGTATCCTTCCAACCGGCCCCATGGCCCAGGGTGGGTCAGCTGAAGAGCTaGGCACCCTGGGACTCCGCT +
Preference number: 4 (lower is better)
Translates to: LMCFPFQVSFQPAPWPRVGQLKS*APWDSA
Trigger: AGCGGAGTCCCAGGGTGCTCAGCTCTTCAGCTGACC...CACCCTGGGCCATGGGGCCGGTTGGAAGGATACTTGGAACGGGAAGCACATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp CATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCCCTCGGGGGTCGCGATaGCGGGGTCTCTGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: HRLPTHRGAALRGSIITVPRGSR*RGLCLR
Trigger: ACGGAGACAGAGACCCCGGCATCGCGACCCCCGAGG...GACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp ATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGCAGCCCACGTCCCGCTaGCCCCAGCCCGGATCCATG +
Preference number: 4 (lower is better)
Translates to: IIVSQHTEVQPCVAPSSQQPTSR*PQPGSM
Trigger: CATGGATCCGGGCTGGGGGCAGCGGGACGTGGGCTG...CTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp TTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGTGGCGCACCCAAGCCCGCTaGCAGTTCTCCCGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: FSEADTGAGLSGDLREVWRTQAR*QFSRKD
Trigger: GTCTTTCCGGGAGAACTGGCAGCGGGCTTGGGTGCG...CCACACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp CTCATGTGCTTCCCGTTCCAAGTATCCTTCCAACCGGCCCCATGGCCCAGGGTGCACTGCCATGGTGGCTaGTGGTCCCAGGGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: LMCFPFQVSFQPAPWPRVHCHGG*WSQGFP
Trigger: GGGAAAGCCCTGGGACCAGCAGCCACCATGGCAGTG...CACCCTGGGCCATGGGGCCGGTTGGAAGGATACTTGGAACGGGAAGCACATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp TTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGTGGGTCCTCGGCACCGGGTaGCCACCTCTCATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: FSEADTGAGLSGDLREVWVLGTG*PPLMCF
Trigger: GAAGCACATGAGAGGTGGGCACCCGGTGCCGAGGAC...CCACACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp CCTCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCACCCCAAAGGAGAAGTTaGCTGCTCAAGATCACTTGG +
Preference number: 4 (lower is better)
Translates to: PLPPSHQSLVHVLGTGCPPQRRS*LLKITW
Trigger: CCAAGTGATCTTGAGCAGGCAACTTCTCCTTTGGGG...TGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp ACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGGACCCTGGAGGGGACTaGTCTGCAGAGACGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TFSEADTGAGLSGDLREVDPGGD*SAETLG
Trigger: CCCCAGCGTCTCTGCAGACCAGTCCCCTCCAGGGTC...CACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp TTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGTGGGCTCTGGGTGGGAGTTaGGGCACCTCCTCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: FSEADTGAGLSGDLREVWALGGS*GTSSKA
Trigger: CGCCTTTGAGGAGGTGCCCCAACTCCCACCCAGAGC...CCACACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp CTCATGTGCTTCCCGTTCCAAGTATCCTTCCAACCGGCCCCATGGCCCAGGGTGGCAGCGGGGGACTGCTaGGTCACAGAGACTGGGAAC +
Preference number: 4 (lower is better)
Translates to: LMCFPFQVSFQPAPWPRVAAGDC*VTETGN
Trigger: GTTCCCAGTCTCTGTGACCCAGCAGTCCCCCGCTGC...CACCCTGGGCCATGGGGCCGGTTGGAAGGATACTTGGAACGGGAAGCACATGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp GCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGAAAAGAAGGGTCACCGTCAGCTCCCGGCTCTaGGGGCCCAGATCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: APSQRELPTLLGQKRRVTVSSRL*GPRSSA
Trigger: GGCACTGGATCTGGGCCCCCAGAGCCGGGAGCTGAC...GGTGACCCTTCTTTTCTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CTCATGTGCTTCCCGTTCCAAGTATCCTTCCAACCGGCCCCATGGCCCAGGGTGGGCTTTCCCTGGCCCTaGGGTGAGTGGGCACAACTG +
Preference number: 4 (lower is better)
Translates to: LMCFPFQVSFQPAPWPRVGFPWP*GEWAQL
Trigger: CAGTTGTGCCCACTCACCCCAGGGCCAGGGAAAGCC...CACCCTGGGCCATGGGGCCGGTTGGAAGGATACTTGGAACGGGAAGCACATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp GAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGATACGGGGCCGGGACTaGACAGTGGTGACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: EGGVGAPSQRELPTLLGQIRGRD*TVVTVV
Trigger: CACCACAGTCACCACTGTCCAGTCCCGGCCCCGTAT...CTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp GAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGAAGGTGGCTGTCCCCTaGGCTGCTGCTATGGGAGGT +
Preference number: 4 (lower is better)
Translates to: EGGVGAPSQRELPTLLGQKVAVP*AAAMGG
Trigger: ACCTCCCATAGCAGCAGCCCAGGGGACAGCCACCTT...CTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336702.7
CDS-3UTR CCA 90 bp GGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCCGGATGGCCACCCGCCCACTaGGCTCTGTCAGCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: GPGSAGGKCFWGIPTHAGWPPAH*ALSAGE
Trigger: TTCGCCAGCTGACAGAGCCCAGTGGGCGGGTGGCCA...TCCGGCATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CTCATGTGCTTCCCGTTCCAAGTATCCTTCCAACCGGCCCCATGGCCCAGGGTGGTGCCCTTTCAGAGCTaGGTCCTCAGAGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LMCFPFQVSFQPAPWPRVVPFQS*VLRAGG
Trigger: GCCCCCAGCTCTGAGGACCCAGCTCTGAAAGGGCAC...CACCCTGGGCCATGGGGCCGGTTGGAAGGATACTTGGAACGGGAAGCACATGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp GGAGGTGGGGAATGGGCTGAGAGAACTCGTGCCCTTTCAGAGCTGGGTCCTCAGGTGCCCTTTCAGAGCTaGGTCCTCAGAGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: GGGEWAERTRALSELGPQVPFQS*VLRAGG
Trigger: GCCCCCAGCTCTGAGGACCCAGCTCTGAAAGGGCAC...CTGAGGACCCAGCTCTGAAAGGGCACGAGTTCTCTCAGCCCATTCCCCACCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR CCA 90 bp CTCAGGGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGTTCCAACCGGCCCCATaGCCCAGGGTGGACGGGGCT +
Preference number: 4 (lower is better)
Translates to: LRDQAQQEANASGEYPHMFQPAP*PRVDGA
Trigger: AGCCCCGTCCACCCTGGGCCATGGGGCCGGTTGGAA...CATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp TTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGTGGGACCTGAGGGAGGTGTaGGAGCCCCATCCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: FSEADTGAGLSGDLREVWDLREV*EPHPKG
Trigger: CCCTTTGGGATGGGGCTCCCACACCTCCCTCAGGTC...CCACACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp GAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGTGGTGCTGGTCTGAGTaGGGACCTGAGGGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: EGGVGAPSQRELPTLLGQWCWSE*GPEGGV
Trigger: CACACCTCCCTCAGGTCCCCACTCAGACCAGCACCA...CTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
3UTR CAA 72 bp CCGGCCTTCTTTCGGACACTGGGCGTGGCCGTTGCGTaGGAGAGGTCATCGTGTGATTGGCTCAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PAFFRTLGVAVA*ERSSCDWLRPA
Trigger: AGCTGGCCTGAGCCAATCACACGATGACCTCTCCAACGCAACGGCCACGCCCAGTGTCCGAAAGAAGGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528586.2
3UTR CAA 72 bp AGCTGCCGGCCTTCTTTCGGACACTGGGCGTGGCCGTaGCGTTGGAGAGGTCATCGTGTGATTGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SCRPSFGHWAWP*RWRGHRVIGSG
Trigger: GCCTGAGCCAATCACACGATGACCTCTCCAACGCAACGGCCACGCCCAGTGTCCGAAAGAAGGCCGGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR GCA 90 bp GCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGAAAAGAAGGGTCACCTGGAGGGGACTGGTCTaGAGAGACGCTGGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: APSQRELPTLLGQKRRVTWRGLV*RDAGAR
Trigger: GCGAGCCCCAGCGTCTCTGCAGACCAGTCCCCTCCA...GGTGACCCTTCTTTTCTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp CTCAGGGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCTCTCCGCGGCTGAGTaGCCAGGACTAGTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LRDQAQQEANASGEYPHMLSAAE*PGLVGA
Trigger: GGCACCCACTAGTCCTGGGCACTCAGCCGCGGAGAG...CATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp GGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCCGGACCGTTTCTGCAGGCCTaGTCGTTCAGCGCTCGCACC +
Preference number: 4 (lower is better)
Translates to: GPGSAGGKCFWGIPTHAGPFLQA*SFSART
Trigger: GGTGCGAGCGCTGAACGAGCAGGCCTGCAGAAACGG...TCCGGCATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp CTCTGTGAGCTGCCAACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGACGGCAGCGGGGGACTaGTGGGTCACAGAGACTGGG +
Preference number: 4 (lower is better)
Translates to: LCELPTFSEADTGAGLSGTAAGD*WVTETG
Trigger: CCCAGTCTCTGTGACCCAGCAGTCCCCCGCTGCCGT...CCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGTTGGCAGCTCACAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp GGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCCGGAAGGCCAGCTTCCTTCTaGCTAGGCCTCCGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: GPGSAGGKCFWGIPTHAGRPASF*LGLRRK
Trigger: CTTCCGCCGGAGGCCTAGGCAGAAGGAAGCTGGCCT...TCCGGCATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp GACCTGAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGCCCAACACACAGAGGTaGAGCCTTGCGTGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: DLREVWEPHPKGNYPPSWPNTQR*SLAWLH
Trigger: ATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGG...CCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTCAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp TTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGTGGGGTGGCTGTCCCGGCTaGTGCTATGGGAGGTATTGC +
Preference number: 4 (lower is better)
Translates to: FSEADTGAGLSGDLREVWGGCPG*CYGRYC
Trigger: GCAATACCTCCCATAGCAGCAGCCGGGACAGCCACC...CCACACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp TCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCGGCTCCGGGAGGGCTaGGTGCGCAGAGCTGACACT +
Preference number: 4 (lower is better)
Translates to: SSSPNTQRCSLAWLHHHSRLREG*VRRADT
Trigger: AGTGTCAGCTCTGCGCACGCAGCCCTCCCGGAGCCG...ACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648610.2
CDS-3UTR CCA 90 bp ACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGGAAGCTCCACTGCCATaGTGGCTGCTGGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TFSEADTGAGLSGDLREVEAPLP*WLLVPG
Trigger: CCCTGGGACCAGCAGCCACCATGGCAGTGGAGCTTC...CACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp GGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCCGGAGTGGAGTGGAGGAGGTaGGAGTACCCAGGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: GPGSAGGKCFWGIPTHAGVEWRR*EYPGSG
Trigger: CCCGGAACCTGGGTACTCCCACCTCCTCCACTCCAC...TCCGGCATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CTCATGTGCTTCCCGTTCCAAGTATCCTTCCAACCGGCCCCATGGCCCAGGGTGATACGGGGCCGGGACTaGACAGTGGTGACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: LMCFPFQVSFQPAPWPRVIRGRD*TVVTVV
Trigger: CACCACAGTCACCACTGTCCAGTCCCGGCCCCGTAT...CACCCTGGGCCATGGGGCCGGTTGGAAGGATACTTGGAACGGGAAGCACATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp TTTCGGACACTGGGCGTGGCCGTTGCGTTGGAGAGGTCATCGTGTGATTGGCTCTGGTGGGTGTCTTCTTaGCCACCCGCCCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: FRTLGVAVALERSSCDWLWWVSS*PPAHWA
Trigger: AGCCCAGTGGGCGGGTGGCCAAGAAGACACCCACCA...GAGCCAATCACACGATGACCTCTCCAACGCAACGGCCACGCCCAGTGTCCGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR CCA 90 bp CTTGATAAGGCGGCGAGAAAAGCTGCCGGCCTTCTTTCGGACACTGGGCGTGGCGAGTGCTGCGCTTGGTaGGTGTCTTCTTGGCCACCC +
Preference number: 4 (lower is better)
Translates to: LDKAARKAAGLLSDTGRGECCAW*VSSWPP
Trigger: GGGTGGCCAAGAAGACACCCACCAAGCGCAGCACTC...GCCACGCCCAGTGTCCGAAAGAAGGCCGGCAGCTTTTCTCGCCGCCTTATCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR CCA 90 bp TTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGTGGCTCAGAGCTGGGGGCTaGGGTTACCATTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: FSEADTGAGLSGDLREVWLRAGG*GYHWPW
Trigger: CCAAGGCCAATGGTAACCCCAGCCCCCAGCTCTGAG...CCACACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp TTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGTGGTGGTGCTGGTCTGAGTaGGGACCTGAGGGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: FSEADTGAGLSGDLREVWWCWSE*GPEGGV
Trigger: CACACCTCCCTCAGGTCCCCACTCAGACCAGCACCA...CCACACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR TCA 90 bp CTCATGTGCTTCCCGTTCCAAGTATCCTTCCAACCGGCCCCATGGCCCAGGGTGGTGGCAGTGTCAGAGTaGCGTGGTAGGTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: LMCFPFQVSFQPAPWPRVVAVSE*RGRSPW
Trigger: CCATGGAGACCTACCACGTCACTCTGACACTGCCAC...CACCCTGGGCCATGGGGCCGGTTGGAAGGATACTTGGAACGGGAAGCACATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp TTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGTGGGTGGCAGTGTCAGAGTaGCGTGGTAGGTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: FSEADTGAGLSGDLREVWVAVSE*RGRSPW
Trigger: CCATGGAGACCTACCACGTCACTCTGACACTGCCAC...CCACACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp ATAAGGGAAGAAGGGTCAGCTGAAGAGCTGAGCACCCTGGGACTCCGCTCAGGGTGCTCCTCAGCACTTTaGGGGTCAGCTCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: IREEGSAEELSTLGLRSGCSSAL*GSAPGS
Trigger: AGAGCCGGGAGCTGACCCTCAAAGTGCTGAGGAGCA...CCCTGAGCGGAGTCCCAGGGTGCTCAGCTCTTCAGCTGACCCTTCTTCCCTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR TCA 90 bp GTGGGGAATGGGCTGAGAGAACTCGTGCCCTTTCAGAGCTGGGTCCTCAGAGCTTGCTCCTCAGCACTTTaGGGGTCAGCTCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: VGNGLRELVPFQSWVLRACSSAL*GSAPGS
Trigger: AGAGCCGGGAGCTGACCCTCAAAGTGCTGAGGAGCA...AGCTCTGAGGACCCAGCTCTGAAAGGGCACGAGTTCTCTCAGCCCATTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR TCA 90 bp CTCATGTGCTTCCCGTTCCAAGTATCCTTCCAACCGGCCCCATGGCCCAGGGTGTGGTGCCATCGGGCATaGTGGTCCGGTCAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: LMCFPFQVSFQPAPWPRVWCHRA*WSGQAQ
Trigger: TTGAGCTTGACCGGACCATCATGCCCGATGGCACCA...CACCCTGGGCCATGGGGCCGGTTGGAAGGATACTTGGAACGGGAAGCACATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR TCA 90 bp GGAGGTGGGGAATGGGCTGAGAGAACTCGTGCCCTTTCAGAGCTGGGTCCTCAGAGCGCCAACTCGTCCTaGGCAATGGGCACCTTGGAA +
Preference number: 4 (lower is better)
Translates to: GGGEWAERTRALSELGPQSANSS*AMGTLE
Trigger: TTCCAAGGTGCCCATTGCTCAGGACGAGTTGGCGCT...CTGAGGACCCAGCTCTGAAAGGGCACGAGTTCTCTCAGCCCATTCCCCACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR TCA 90 bp TTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGTGGAGGTGGGGAATGGGCTaGGAGAACTCGTGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: FSEADTGAGLSGDLREVWRWGMG*ENSCPF
Trigger: GAAAGGGCACGAGTTCTCTCAGCCCATTCCCCACCT...CCACACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR TCA 90 bp CATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCGGTCAGCTGAAGAGCTaGGCACCCTGGGACTCCGCT +
Preference number: 4 (lower is better)
Translates to: HRLPTHRGAALRGSIITVGQLKS*APWDSA
Trigger: AGCGGAGTCCCAGGGTGCTCAGCTCTTCAGCTGACC...GACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR TCA 90 bp GTGGGGAATGGGCTGAGAGAACTCGTGCCCTTTCAGAGCTGGGTCCTCAGAGCTGGAAGAAGGGTCAGCTaGAGAGCTGAGCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: VGNGLRELVPFQSWVLRAGRRVS*RAEHPG
Trigger: CCCAGGGTGCTCAGCTCTTCAGCTGACCCTTCTTCC...AGCTCTGAGGACCCAGCTCTGAAAGGGCACGAGTTCTCTCAGCCCATTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR TCA 90 bp TTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGTGGCGGCCCTGCTCTCTGTaGGCTGCCAACATTCTCAGA +
Preference number: 4 (lower is better)
Translates to: FSEADTGAGLSGDLREVWRPCSL*AANILR
Trigger: TCTGAGAATGTTGGCAGCTCACAGAGAGCAGGGCCG...CCACACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp ACAGAAAAGAAGGGTCACCTGGGAGAGATGCCCTCTATCATCTGTTCACGGAGGCAGCCCACGTCCCGCTaGCCCCAGCCCGGATCCATG +
Preference number: 4 (lower is better)
Translates to: TEKKGHLGEMPSIICSRRQPTSR*PQPGSM
Trigger: CATGGATCCGGGCTGGGGGCAGCGGGACGTGGGCTG...CCTCCGTGAACAGATGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp GAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGATAGTGAAGCTCCACTaGCATGGTGGCTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: EGGVGAPSQRELPTLLGQIVKLH*HGGCWS
Trigger: GGACCAGCAGCCACCATGGCAGTGGAGCTTCACTAT...CTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp ATAAGGGAAGAAGGGTCAGCTGAAGAGCTGAGCACCCTGGGACTCCGCTCAGGGGGCGGCGAGAAAAGCTaGCGGCCTTCTTTCGGACAC +
Preference number: 4 (lower is better)
Translates to: IREEGSAEELSTLGLRSGGGEKS*RPSFGH
Trigger: GTGTCCGAAAGAAGGCCGGCAGCTTTTCTCGCCGCC...CCCTGAGCGGAGTCCCAGGGTGCTCAGCTCTTCAGCTGACCCTTCTTCCCTTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp CTTGATAAGGCGGCGAGAAAAGCTGCCGGCCTTCTTTCGGACACTGGGCGTGGCAGAGGCAGACACTGGTaGTGGTCTGAGTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: LDKAARKAAGLLSDTGRGRGRHW*WSEWGP
Trigger: AGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCT...GCCACGCCCAGTGTCCGAAAGAAGGCCGGCAGCTTTTCTCGCCGCCTTATCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR GCA 90 bp ACAGAAAAGAAGGGTCACCTGGGAGAGATGCCCTCTATCATCTGTTCACGGAGGAAGGTGGGGAGTACCTaGCCCCCATCCCGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: TEKKGHLGEMPSIICSRRKVGST*PPSRAG
Trigger: GCCGGCCCGGGATGGGGGGCAGGTACTCCCCACCTT...CCTCCGTGAACAGATGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp GGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCCGGACTGGGTCACAGAGACTaGGAACCGCACCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GPGSAGGKCFWGIPTHAGLGHRD*EPHLLS
Trigger: GCTGAGGAGGTGCGGTTCCCAGTCTCTGTGACCCAG...TCCGGCATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp CTCATGTGCTTCCCGTTCCAAGTATCCTTCCAACCGGCCCCATGGCCCAGGGTGCTGGGGCATCATGGGTaGCTTCTCACTGGGTACCAG +
Preference number: 4 (lower is better)
Translates to: LMCFPFQVSFQPAPWPRVLGHHG*LLTGYQ
Trigger: CTGGTACCCAGTGAGAAGCCACCCATGATGCCCCAG...CACCCTGGGCCATGGGGCCGGTTGGAAGGATACTTGGAACGGGAAGCACATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CTCAGGGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCAGCCCTCGCGGGCTTaGTCCACTTCTGCTGCATGG +
Preference number: 4 (lower is better)
Translates to: LRDQAQQEANASGEYPHMQPSRA*STSAAW
Trigger: CCATGCAGCAGAAGTGGACCAAGCCCGCGAGGGCTG...CATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp TTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGTGGACAGGCAGTGTGGCCTaGCCTAGGAGTTCGGTGTCT +
Preference number: 4 (lower is better)
Translates to: FSEADTGAGLSGDLREVWTGSVA*PRSSVS
Trigger: AGACACCGAACTCCTAGGCCAGGCCACACTGCCTGT...CCACACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCAGCCCACAGGCAGTGTaGCCTGGCCTAGGAGTTCGG +
Preference number: 4 (lower is better)
Translates to: HRLPTHRGAALRGSIITVSPQAV*PGLGVR
Trigger: CCGAACTCCTAGGCCAGGCCACACTGCCTGTGGGCT...GACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp ACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGTTCGAGACAGTGGTCTaGAGGGGGAGCCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: TFSEADTGAGLSGDLREVFETVV*RGSPQA
Trigger: TGCCTGTGGGCTCCCCCTCCAGACCACTGTCTCGAA...CACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp ACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGCTGTCTTCGAGACAGTaGTCTGGAGGGGGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: TFSEADTGAGLSGDLREVLSSRQ*SGGGAH
Trigger: GTGGGCTCCCCCTCCAGACCACTGTCTCGAAGACAG...CACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CTCTGTGAGCTGCCAACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGGCTTTCCCTGGCCCTaGGGTGAGTGGGCACAACTG +
Preference number: 4 (lower is better)
Translates to: LCELPTFSEADTGAGLSGGFPWP*GEWAQL
Trigger: CAGTTGTGCCCACTCACCCCAGGGCCAGGGAAAGCC...CCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGTTGGCAGCTCACAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CTCTGTGAGCTGCCAACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGAAGCTCCACTGCCATaGTGGCTGCTGGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LCELPTFSEADTGAGLSGEAPLP*WLLVPG
Trigger: CCCTGGGACCAGCAGCCACCATGGCAGTGGAGCTTC...CCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGTTGGCAGCTCACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp GCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGAAAAGAAGGGTCACCGTGGAGTGGAGGAGGTaGGAGTACCCAGGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: APSQRELPTLLGQKRRVTVEWRR*EYPGSG
Trigger: CCCGGAACCTGGGTACTCCCACCTCCTCCACTCCAC...GGTGACCCTTCTTTTCTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp ATAAGGGAAGAAGGGTCAGCTGAAGAGCTGAGCACCCTGGGACTCCGCTCAGGGCAGGGTCCAAGCCGTTaGAAAGGTGGCTGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: IREEGSAEELSTLGLRSGQGPSR*KGGCPL
Trigger: CAGGGGACAGCCACCTTTCCAACGGCTTGGACCCTG...CCCTGAGCGGAGTCCCAGGGTGCTCAGCTCTTCAGCTGACCCTTCTTCCCTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336702.7
CDS-3UTR CCA 90 bp GCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGAAAAGAAGGGTCACCGCGGTCCTGGAGACATaGCTGGTGGGTCTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: APSQRELPTLLGQKRRVTAVLET*LVGLRE
Trigger: CTCCCTCAGACCCACCAGCCATGTCTCCAGGACCGC...GGTGACCCTTCTTTTCTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CTCTGTGAGCTGCCAACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGCGGTCCTGGAGACATaGCTGGTGGGTCTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LCELPTFSEADTGAGLSGAVLET*LVGLRE
Trigger: CTCCCTCAGACCCACCAGCCATGTCTCCAGGACCGC...CCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGTTGGCAGCTCACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp TTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGTGGTCTCCAGGGCACCAGTaGACCCCGTTTCCGACTCAA +
Preference number: 4 (lower is better)
Translates to: FSEADTGAGLSGDLREVWSPGHQ*TPFPTQ
Trigger: TTGAGTCGGAAACGGGGTCCACTGGTGCCCTGGAGA...CCACACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CTCAGGGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGGACCTGAGGGAGGTGTaGGAGCCCCATCCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: LRDQAQQEANASGEYPHMDLREV*EPHPKG
Trigger: CCCTTTGGGATGGGGCTCCCACACCTCCCTCAGGTC...CATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp GACCTGAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGCTAAAGCCATCTCTCTaGGGAAGGCTTCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: DLREVWEPHPKGNYPPSWLKPSL*GRLPTR
Trigger: CCTGGTGGGAAGCCTTCCCCAGAGAGATGGCTTTAG...CCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CTCTGTGAGCTGCCAACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGCAGGGTCCAAGCCGTTaGAAAGGTGGCTGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: LCELPTFSEADTGAGLSGQGPSR*KGGCPG
Trigger: GCCGGGACAGCCACCTTTCCAACGGCTTGGACCCTG...CCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGTTGGCAGCTCACAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528586.2
ENST00000648610.2
CDS-3UTR TCA 90 bp GAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGAGGAAACTCACTTTGTaGTCCTTGAGGCTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: EGGVGAPSQRELPTLLGQRKLTL*SLRLRV
Trigger: GACCCGCAGCCTCAAGGATCACAAAGTGAGTTTCCT...CTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp ATAAGGGAAGAAGGGTCAGCTGAAGAGCTGAGCACCCTGGGACTCCGCTCAGGGGGAGAGGTCATCGTGTaGTTGGCTCAGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: IREEGSAEELSTLGLRSGGEVIV*LAQASF
Trigger: GAAGCTGGCCTGAGCCAATCACACGATGACCTCTCC...CCCTGAGCGGAGTCCCAGGGTGCTCAGCTCTTCAGCTGACCCTTCTTCCCTTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR TCA 90 bp TTTCGGACACTGGGCGTGGCCGTTGCGTTGGAGAGGTCATCGTGTGATTGGCTCGGAGAGGTCATCGTGTaGTTGGCTCAGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FRTLGVAVALERSSCDWLGEVIV*LAQASF
Trigger: GAAGCTGGCCTGAGCCAATCACACGATGACCTCTCC...GAGCCAATCACACGATGACCTCTCCAACGCAACGGCCACGCCCAGTGTCCGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR GCA 90 bp GCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGAAAAGAAGGGTCACCAAGCCCCGGGCATATTaGAGCAGCCAGGCGAACACC +
Preference number: 4 (lower is better)
Translates to: APSQRELPTLLGQKRRVTKPRAY*SSQANT
Trigger: GGTGTTCGCCTGGCTGCTGCAATATGCCCGGGGCTT...GGTGACCCTTCTTTTCTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp CATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCTGGAGCTCCCGTTTCTaGAGGCCTGCTCGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: HRLPTHRGAALRGSIITVWSSRF*RPARSA
Trigger: CGCTGAACGAGCAGGCCTGCAGAAACGGGAGCTCCA...GACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp CTCAGGGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGGGGGCCCAGATCCAGTaGCAGGTCTTCTGTCCACTC +
Preference number: 4 (lower is better)
Translates to: LRDQAQQEANASGEYPHMGAQIQ*QVFCPL
Trigger: GAGTGGACAGAAGACCTGGCACTGGATCTGGGCCCC...CATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp GGAGGTGGGGAATGGGCTGAGAGAACTCGTGCCCTTTCAGAGCTGGGTCCTCAGTGCTATGGGAGGTATTaGTGGGGCCACTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: GGGEWAERTRALSELGPQCYGRY*WGHCSH
Trigger: GTGAGAGCAGTGGCCCCAGCAATACCTCCCATAGCA...CTGAGGACCCAGCTCTGAAAGGGCACGAGTTCTCTCAGCCCATTCCCCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR GCA 90 bp CTCAGGGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGGGCTGTCCCCTGGGCTaGTGCTATGGGAGGTATTGC +
Preference number: 4 (lower is better)
Translates to: LRDQAQQEANASGEYPHMGCPLG*CYGRYC
Trigger: GCAATACCTCCCATAGCAGCAGCCCAGGGGACAGCC...CATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336702.7
CDS-3UTR GCA 90 bp CTCTGTGAGCTGCCAACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGGCGGCGAGAAAAGCTaGCGGCCTTCTTTCGGACAC +
Preference number: 4 (lower is better)
Translates to: LCELPTFSEADTGAGLSGGGEKS*RPSFGH
Trigger: GTGTCCGAAAGAAGGCCGGCAGCTTTTCTCGCCGCC...CCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGTTGGCAGCTCACAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp CATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCGGCGGCGAGAAAAGCTaGCGGCCTTCTTTCGGACAC +
Preference number: 4 (lower is better)
Translates to: HRLPTHRGAALRGSIITVGGEKS*RPSFGH
Trigger: GTGTCCGAAAGAAGGCCGGCAGCTTTTCTCGCCGCC...GACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp ATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGGTCCTCGGCACCGGGTaGCCACCTCTCATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: IIVSQHTEVQPCVAPSSQVLGTG*PPLMCF
Trigger: GAAGCACATGAGAGGTGGGCACCCGGTGCCGAGGAC...CTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp TTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTAAGGTGGGGAGTACCTaGCCCCCATCCCGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: FLLPGPAFCPISCSSLPGKVGST*PPSRAG
Trigger: GCCGGCCCGGGATGGGGGGCAGGTACTCCCCACCTT...ACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAGGAAGCAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp GGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCCGGACCCAACACACAGAGGTaGAGCCTTGCGTGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: GPGSAGGKCFWGIPTHAGPNTQR*SLAWLH
Trigger: ATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGG...TCCGGCATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp ACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGCCCAACACACAGAGGTaGAGCCTTGCGTGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: TFSEADTGAGLSGDLREVPNTQR*SLAWLH
Trigger: ATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGG...CACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp GTCACAGCCTGGCTGCCTACTGCCTTTCAAAGGATAACCAGTTGTCCAGTTTATGGTCTGCAGAGACGCTaGGGCTCGCGGGCCGGCACC +
Preference number: 4 (lower is better)
Translates to: VTAWLPTAFQRITSCPVYGLQRR*GSRAGT
Trigger: GGTGCCGGCCCGCGAGCCCCAGCGTCTCTGCAGACC...ATAAACTGGACAACTGGTTATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp CTCAGGGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCTGGGTCACAGAGACTaGGAACCGCACCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LRDQAQQEANASGEYPHMLGHRD*EPHLLS
Trigger: GCTGAGGAGGTGCGGTTCCCAGTCTCTGTGACCCAG...CATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp TCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTTGGGTGGCTTCTCACTaGGTACCAGGCCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SSSPNTQRCSLAWLHHHSWVASH*VPGLLG
Trigger: CCCCAGGAGGCCTGGTACCCAGTGAGAAGCCACCCA...ACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CTCTGTGAGCTGCCAACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGCTGTCTTCGAGACAGTaGTCTGGAGGGGGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: LCELPTFSEADTGAGLSGLSSRQ*SGGGAH
Trigger: GTGGGCTCCCCCTCCAGACCACTGTCTCGAAGACAG...CCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGTTGGCAGCTCACAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp GCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGAAAAGAAGGGTCACCTGTGATGCTGGGGCGTaGAGTGGAGGAGGTGGGAGT +
Preference number: 4 (lower is better)
Translates to: APSQRELPTLLGQKRRVTCDAGA*SGGGGS
Trigger: ACTCCCACCTCCTCCACTCCACGCCCCAGCATCACA...GGTGACCCTTCTTTTCTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CTCAGGGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGTGTGATGCTGGGGCGTaGAGTGGAGGAGGTGGGAGT +
Preference number: 4 (lower is better)
Translates to: LRDQAQQEANASGEYPHMCDAGA*SGGGGS
Trigger: ACTCCCACCTCCTCCACTCCACGCCCCAGCATCACA...CATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp GACCTGAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGAGGTCATCGTGTGATTaGCTCAGGCCAGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: DLREVWEPHPKGNYPPSWRSSCD*LRPASF
Trigger: GAAGGAAGCTGGCCTGAGCCAATCACACGATGACCT...CCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CTCATGTGCTTCCCGTTCCAAGTATCCTTCCAACCGGCCCCATGGCCCAGGGTGGCGTGGCCGTTGCGTTaGAGAGGTCATCGTGTGATT +
Preference number: 4 (lower is better)
Translates to: LMCFPFQVSFQPAPWPRVAWPLR*RGHRVI
Trigger: AATCACACGATGACCTCTCCAACGCAACGGCCACGC...CACCCTGGGCCATGGGGCCGGTTGGAAGGATACTTGGAACGGGAAGCACATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CTCTGTGAGCTGCCAACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGTTCGGACACTGGGCGTaGCCGTTGCGTTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: LCELPTFSEADTGAGLSGFGHWA*PLRWRG
Trigger: ACCTCTCCAACGCAACGGCCACGCCCAGTGTCCGAA...CCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGTTGGCAGCTCACAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCCCTTCTTTCGGACACTaGGCGTGGCCGTTGCGTTGG +
Preference number: 4 (lower is better)
Translates to: HRLPTHRGAALRGSIITVPSFGH*AWPLRW
Trigger: CCAACGCAACGGCCACGCCCAGTGTCCGAAAGAAGG...GACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp ATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGGTGCCCTTTCAGAGCTaGGTCCTCAGAGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: IIVSQHTEVQPCVAPSSQVPFQS*VLRAGG
Trigger: GCCCCCAGCTCTGAGGACCCAGCTCTGAAAGGGCAC...CTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CTCTGTGAGCTGCCAACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGTGGTGCTGGTCTGAGTaGGGACCTGAGGGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: LCELPTFSEADTGAGLSGWCWSE*GPEGGV
Trigger: CACACCTCCCTCAGGTCCCCACTCAGACCAGCACCA...CCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGTTGGCAGCTCACAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp ATAAGGGAAGAAGGGTCAGCTGAAGAGCTGAGCACCCTGGGACTCCGCTCAGGGAAGCCGTTGGAAAGGTaGCTGTCCCGGCTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: IREEGSAEELSTLGLRSGKPLER*LSRLLL
Trigger: TAGCAGCAGCCGGGACAGCCACCTTTCCAACGGCTT...CCCTGAGCGGAGTCCCAGGGTGCTCAGCTCTTCAGCTGACCCTTCTTCCCTTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528586.2
ENST00000648610.2
CDS-3UTR TCA 90 bp GTGGGGAATGGGCTGAGAGAACTCGTGCCCTTTCAGAGCTGGGTCCTCAGAGCTAGCTCATTTCCCAAGTaGGATGCCCGAAGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: VGNGLRELVPFQSWVLRASSFPK*DARSCR
Trigger: ACGGCAGCTTCGGGCATCTCACTTGGGAAATGAGCT...AGCTCTGAGGACCCAGCTCTGAAAGGGCACGAGTTCTCTCAGCCCATTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR TCA 90 bp CATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCTCACTTTGTGATCCTTaGGGCTGCGGGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: HRLPTHRGAALRGSIITVSLCDP*GCGSPG
Trigger: CCCTGGAGACCCGCAGCCTCAAGGATCACAAAGTGA...GACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp CTCAGGGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCGGCCCTGCTCTCTGTaGGCTGCCAACATTCTCAGA +
Preference number: 4 (lower is better)
Translates to: LRDQAQQEANASGEYPHMRPCSL*AANILR
Trigger: TCTGAGAATGTTGGCAGCTCACAGAGAGCAGGGCCG...CATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp AGATCACTTGGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCACCCAGCCCGGATCCATaGTCCGCGCGGGCTCCGATC +
Preference number: 4 (lower is better)
Translates to: RSLGLSVADSVFLLPGPAPSPDP*SARAPI
Trigger: GATCGGAGCCCGCGCGGAGCATGGATCCGGGCTGGG...TGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAGTGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp ATCATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACGCACCCAAGCCCGCTaGCAGTTCTCCCGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: IIIVSQHTEVQPCVAPSSRTQAR*QFSRKD
Trigger: GTCTTTCCGGGAGAACTGGCAGCGGGCTTGGGTGCG...TGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp CTCATGTGCTTCCCGTTCCAAGTATCCTTCCAACCGGCCCCATGGCCCAGGGTGAGCACAGTTCCTCGGTaGCTTCCAGCTCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: LMCFPFQVSFQPAPWPRVSTVPR*LPAHFP
Trigger: TGGGAAATGAGCTGGAAGGCACCGAGGAACTGTGCT...CACCCTGGGCCATGGGGCCGGTTGGAAGGATACTTGGAACGGGAAGCACATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp ATCATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACACTGCCATGGTGGCTaGTGGTCCCAGGGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: IIIVSQHTEVQPCVAPSSHCHGG*WSQGFP
Trigger: GGGAAAGCCCTGGGACCAGCAGCCACCATGGCAGTG...TGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp CATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCAGGGGGAGTCTAATTTaGCGTCTATACGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: HRLPTHRGAALRGSIITVRGSLI*RLYGAG
Trigger: CCCGGCCCCGTATAGACGGCAAATTAGACTCCCCCT...GACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp GGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCCGGAGTCCCTGCATCATCCTaGACTGAGGCTTCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: GPGSAGGKCFWGIPTHAGVPASS*TEASRD
Trigger: ATCCCTGGAAGCCTCAGTGCAGGATGATGCAGGGAC...TCCGGCATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp TTTCGGACACTGGGCGTGGCCGTTGCGTTGGAGAGGTCATCGTGTGATTGGCTCACGGGTTGTCTCGTCTaGTTCCTGGACACTTGTGGG +
Preference number: 4 (lower is better)
Translates to: FRTLGVAVALERSSCDWLTGCLV*FLDTCG
Trigger: CCCACAAGTGTCCAGGAAGCAGACGAGACAACCCGT...GAGCCAATCACACGATGACCTCTCCAACGCAACGGCCACGCCCAGTGTCCGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR CCA 90 bp CTCATGTGCTTCCCGTTCCAAGTATCCTTCCAACCGGCCCCATGGCCCAGGGTGCAAAGGCGATTTGGATaGAGCTCCCGTTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LMCFPFQVSFQPAPWPRVQRRFG*SSRFCR
Trigger: CCTGCAGAAACGGGAGCTCCATCCAAATCGCCTTTG...CACCCTGGGCCATGGGGCCGGTTGGAAGGATACTTGGAACGGGAAGCACATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp TCCTCCCACACCATCCATGTCACAGCCTGGCTGCCTACTGCCTTTCAAAGGATAGATGCTGGCTCTGGGTaGGAGTTGGGGCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: SSHTIHVTAWLPTAFQRIDAGSG*ELGHLL
Trigger: GAGGAGGTGCCCCAACTCCCACCCAGAGCCAGCATC...TATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGACATGGATGGTGTGGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp TCCTCCCACACCATCCATGTCACAGCCTGGCTGCCTACTGCCTTTCAAAGGATACGTGGTAGGTCTCCATaGAGACGGCAGCGGGGGACT +
Preference number: 4 (lower is better)
Translates to: SSHTIHVTAWLPTAFQRIRGRSP*RRQRGT
Trigger: AGTCCCCCGCTGCCGTCTCCATGGAGACCTACCACG...TATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGACATGGATGGTGTGGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp GGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCCGGACTTCACCTCTCTCCCTaGCCTGAAGCTTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: GPGSAGGKCFWGIPTHAGLHLSP*PEAWEA
Trigger: TGCTTCCCAAGCTTCAGGCCAGGGAGAGAGGTGAAG...TCCGGCATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp ATCATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCATGGGTGGCTTCTCACTaGGTACCAGGCCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: IIIVSQHTEVQPCVAPSSWVASH*VPGLLG
Trigger: CCCCAGGAGGCCTGGTACCCAGTGAGAAGCCACCCA...TGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CTCAGGGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCTGGGGCATCATGGGTaGCTTCTCACTGGGTACCAG +
Preference number: 4 (lower is better)
Translates to: LRDQAQQEANASGEYPHMLGHHG*LLTGYQ
Trigger: CTGGTACCCAGTGAGAAGCCACCCATGATGCCCCAG...CATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CTCAGGGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGGAGCCTGGGGCATCATaGGTGGCTTCTCACTGGGTA +
Preference number: 4 (lower is better)
Translates to: LRDQAQQEANASGEYPHMEPGAS*VASHWV
Trigger: TACCCAGTGAGAAGCCACCCATGATGCCCCAGGCTC...CATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CTCTGTGAGCTGCCAACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGTGGCCCTGGGGTGAGTaGGCACAACTGTCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: LCELPTFSEADTGAGLSGWPWGE*AQLSSR
Trigger: TCTCGAAGACAGTTGTGCCCACTCACCCCAGGGCCA...CCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGTTGGCAGCTCACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp ATCATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCATGCCATGGTGGCTGCTaGTCCCAGGGCTTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: IIIVSQHTEVQPCVAPSSCHGGC*SQGFPW
Trigger: CCAGGGAAAGCCCTGGGACCAGCAGCCACCATGGCA...TGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp ATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGATACGGGGCCGGGACTaGACAGTGGTGACTGTGGTG +
Preference number: 4 (lower is better)
Translates to: IIVSQHTEVQPCVAPSSQIRGRD*TVVTVV
Trigger: CACCACAGTCACCACTGTCCAGTCCCGGCCCCGTAT...CTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CTCTGTGAGCTGCCAACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGCTGGGCTCTGTCAGCTaGCGAATCGCTGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LCELPTFSEADTGAGLSGLGSVS*RIAVSA
Trigger: AGCAGAGACAGCGATTCGCCAGCTGACAGAGCCCAG...CCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGTTGGCAGCTCACAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp TCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTGAGTGCTGCGCTTGGTaGGTGTCTTCTTGGCCACCC +
Preference number: 4 (lower is better)
Translates to: SSSPNTQRCSLAWLHHHSECCAW*VSSWPP
Trigger: GGGTGGCCAAGAAGACACCCACCAAGCGCAGCACTC...ACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp TCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTTTCGGACACTGGGCGTaGCCGTTGCGTTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SSSPNTQRCSLAWLHHHSFGHWA*PLRWRG
Trigger: ACCTCTCCAACGCAACGGCCACGCCCAGTGTCCGAA...ACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp TCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCTCAGAGCTGGGGGCTaGGGTTACCATTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SSSPNTQRCSLAWLHHHSLRAGG*GYHWPW
Trigger: CCAAGGCCAATGGTAACCCCAGCCCCCAGCTCTGAG...ACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp TGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATCCCCATGGCCCAGGGTaGACGGGGCTTCCCGGAACC +
Preference number: 4 (lower is better)
Translates to: CLWQTQFSCFLVLHSAQYPHGPG*TGLPGT
Trigger: GGTTCCGGGAAGCCCCGTCCACCCTGGGCCATGGGG...ATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp GGCGAGAAAAGCTGCCGGCCTTCTTTCGGACACTGGGCGTGGCCGTTGCGTTGGAAAAGAAGGGTCACCTaGGAGAGATGCCCTCTATCA +
Preference number: 4 (lower is better)
Translates to: GEKSCRPSFGHWAWPLRWKRRVT*ERCPLS
Trigger: TGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTT...CCAACGCAACGGCCACGCCCAGTGTCCGAAAGAAGGCCGGCAGCTTTTCTCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR TCA 90 bp TCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTTGGTGCCATCGGGCATaGTGGTCCGGTCAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: SSSPNTQRCSLAWLHHHSWCHRA*WSGQAQ
Trigger: TTGAGCTTGACCGGACCATCATGCCCGATGGCACCA...ACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR TCA 90 bp ATCATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCAGGAAGAAGGGTCAGCTaGAGAGCTGAGCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: IIIVSQHTEVQPCVAPSSGRRVS*RAEHPG
Trigger: CCCAGGGTGCTCAGCTCTTCAGCTGACCCTTCTTCC...TGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR TCA 90 bp TCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCGGCCCTGCTCTCTGTaGGCTGCCAACATTCTCAGA +
Preference number: 4 (lower is better)
Translates to: SSSPNTQRCSLAWLHHHSRPCSL*AANILR
Trigger: TCTGAGAATGTTGGCAGCTCACAGAGAGCAGGGCCG...ACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR TCA 90 bp CCTCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCAGATAGCCATGATGATTaGAGTTCCCATTTTACAGAT +
Preference number: 4 (lower is better)
Translates to: PLPPSHQSLVHVLGTGCPDSHDD*SSHFTD
Trigger: ATCTGTAAAATGGGAACTTCAATCATCATGGCTATC...TGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp TATGAGGAAACTGAGGTCCCCAAAGGAGAAGTTGCCTGCTCAAGATCACTTGGTTTAGTCGCCGGCCAGTaGCCGACTCCTCCCACCGCG +
Preference number: 4 (lower is better)
Translates to: YEETEVPKGEVACSRSLGLVAGQ*PTPPTA
Trigger: CGCGGTGGGAGGAGTCGGGCACTGGCCGGCGACTAA...ACCAAGTGATCTTGAGCAGGCAACTTCTCCTTTGGGGACCTCAGTTTCCTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp ACAGAAAAGAAGGGTCACCTGGGAGAGATGCCCTCTATCATCTGTTCACGGAGGCCGTTTCTGCAGGCCTaGTCGTTCAGCGCTCGCACC +
Preference number: 4 (lower is better)
Translates to: TEKKGHLGEMPSIICSRRPFLQA*SFSART
Trigger: GGTGCGAGCGCTGAACGAGCAGGCCTGCAGAAACGG...CCTCCGTGAACAGATGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp GGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCCGGACGCAGCACCATGGTATaGTCAGATTGGTCTACGCAG +
Preference number: 4 (lower is better)
Translates to: GPGSAGGKCFWGIPTHAGRSTMV*SDWSTQ
Trigger: CTGCGTAGACCAATCTGAGCATACCATGGTGCTGCG...TCCGGCATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp CTCTGTGAGCTGCCAACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGTGCTATGGGAGGTATTaGTGGGGCCACTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: LCELPTFSEADTGAGLSGCYGRY*WGHCSH
Trigger: GTGAGAGCAGTGGCCCCAGCAATACCTCCCATAGCA...CCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGTTGGCAGCTCACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp ATCATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCAGGGAATACCCACACATaGCGGACAGGGCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: IIIVSQHTEVQPCVAPSSGNTHT*RTGPSS
Trigger: AGAGGAGGGCCCTGTCCGGCATGTGTGGGTATTCCC...TGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp GGTTTGGATTTGAAGGAAAAGCGCTTGATAAGGCGGCGAGAAAAGCTGCCGGCCGGTGGCTGTCCCGGCTaGTGCTATGGGAGGTATTGC +
Preference number: 4 (lower is better)
Translates to: GLDLKEKRLIRRREKLPAGGCPG*CYGRYC
Trigger: GCAATACCTCCCATAGCAGCAGCCGGGACAGCCACC...GGCCGGCAGCTTTTCTCGCCGCCTTATCAAGCGCTTTTCCTTCAAATCCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR GCA 90 bp TCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTGCGCAGGAAACTCACTaGAGGGGAAGAGGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: SSSPNTQRCSLAWLHHHSAQETH*RGRGEA
Trigger: AGCTTCCCCTCTTCCCCTGCAGTGAGTTTCCTGCGC...ACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR CCA 90 bp CCCCTTCTTCCCTGCAGGAACTTCTTAGCAGATCCACAATGTGTGTCATCTACCGACCCTGGAGGGGACTaGTCTGCAGAGACGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PLLPCRNFLADPQCVSSTDPGGD*SAETLG
Trigger: CCCCAGCGTCTCTGCAGACCAGTCCCCTCCAGGGTC...GGTAGATGACACACATTGTGGATCTGCTAAGAAGTTCCTGCAGGGAAGAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp TCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTGGGTCTCTCCTAGCTTaGTCAGCAGTCGGACCCGTT +
Preference number: 4 (lower is better)
Translates to: SSSPNTQRCSLAWLHHHSGSLLA*SAVGPV
Trigger: AACGGGTCCGACTGCTGACCAAGCTAGGAGAGACCC...ACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp CATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCGTTGACCATCATGGCTaGCTGGGTGCTGACTATGGC +
Preference number: 4 (lower is better)
Translates to: HRLPTHRGAALRGSIITVVDHHG*LGADYG
Trigger: GCCATAGTCAGCACCCAGCCAGCCATGATGGTCAAC...GACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp ATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGGAGCCTGGGGCATCATaGGTGGCTTCTCACTGGGTA +
Preference number: 4 (lower is better)
Translates to: IIVSQHTEVQPCVAPSSQEPGAS*VASHWV
Trigger: TACCCAGTGAGAAGCCACCCATGATGCCCCAGGCTC...CTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp TCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTTGGCCCTGGGGTGAGTaGGCACAACTGTCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: SSSPNTQRCSLAWLHHHSWPWGE*AQLSSR
Trigger: TCTCGAAGACAGTTGTGCCCACTCACCCCAGGGCCA...ACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp TCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCTGGGCTCTGTCAGCTaGCGAATCGCTGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SSSPNTQRCSLAWLHHHSLGSVS*RIAVSA
Trigger: AGCAGAGACAGCGATTCGCCAGCTGACAGAGCCCAG...ACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp ACAGAAAAGAAGGGTCACCTGGGAGAGATGCCCTCTATCATCTGTTCACGGAGGGCGGTCCTGGAGACATaGCTGGTGGGTCTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: TEKKGHLGEMPSIICSRRAVLET*LVGLRE
Trigger: CTCCCTCAGACCCACCAGCCATGTCTCCAGGACCGC...CCTCCGTGAACAGATGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp GGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCCGGAGTCTCGTCTGCTTCCTaGACACTTGTGGGACTAGAG +
Preference number: 4 (lower is better)
Translates to: GPGSAGGKCFWGIPTHAGVSSAS*TLVGLE
Trigger: CTCTAGTCCCACAAGTGTCCAGGAAGCAGACGAGAC...TCCGGCATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp ATAAGGGAAGAAGGGTCAGCTGAAGAGCTGAGCACCCTGGGACTCCGCTCAGGGAGGTCATCGTGTGATTaGCTCAGGCCAGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: IREEGSAEELSTLGLRSGRSSCD*LRPASF
Trigger: GAAGGAAGCTGGCCTGAGCCAATCACACGATGACCT...CCCTGAGCGGAGTCCCAGGGTGCTCAGCTCTTCAGCTGACCCTTCTTCCCTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp ATCATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACCTTCTTTCGGACACTaGGCGTGGCCGTTGCGTTGG +
Preference number: 4 (lower is better)
Translates to: IIIVSQHTEVQPCVAPSSPSFGH*AWPLRW
Trigger: CCAACGCAACGGCCACGCCCAGTGTCCGAAAGAAGG...TGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp TCCTCCCACACCATCCATGTCACAGCCTGGCTGCCTACTGCCTTTCAAAGGATACTCAGAGCTGGGGGCTaGGGTTACCATTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SSHTIHVTAWLPTAFQRILRAGG*GYHWPW
Trigger: CCAAGGCCAATGGTAACCCCAGCCCCCAGCTCTGAG...TATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGACATGGATGGTGTGGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp CTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGCCCAGAGGGCTTTCCTaGCCCAGGCACTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: LVLHSAQYPVAAYLVQVLPRGLS*PRHWRS
Trigger: GGATCTCCAGTGCCTGGGCCAGGAAAGCCCTCTGGG...CAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp TTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGTGGATCCATGTCACAGCCTaGCTGCCTACTGCCTTTCAA +
Preference number: 4 (lower is better)
Translates to: FSEADTGAGLSGDLREVWIHVTA*LPTAFQ
Trigger: TTGAAAGGCAGTAGGCAGCCAGGCTGTGACATGGAT...CCACACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp AGATCACTTGGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCACTTGAAGGCGAAGAGTaGCGCCAGGAGGCCCCGGAC +
Preference number: 4 (lower is better)
Translates to: RSLGLSVADSVFLLPGPALEGEE*RQEAPD
Trigger: GTCCGGGGCCTCCTGGCGTCACTCTTCGCCTTCAAG...TGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAGTGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp TCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTAGCTCATTTCCCAAGTaGGATGCCCGAAGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: SSSPNTQRCSLAWLHHHSSSFPK*DARSCR
Trigger: ACGGCAGCTTCGGGCATCTCACTTGGGAAATGAGCT...ACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR TCA 90 bp GGTTTGGATTTGAAGGAAAAGCGCTTGATAAGGCGGCGAGAAAAGCTGCCGGCCTGGTGCCATCGGGCATaGTGGTCCGGTCAAGCTCAA +
Preference number: 4 (lower is better)
Translates to: GLDLKEKRLIRRREKLPAWCHRA*WSGQAQ
Trigger: TTGAGCTTGACCGGACCATCATGCCCGATGGCACCA...GGCCGGCAGCTTTTCTCGCCGCCTTATCAAGCGCTTTTCCTTCAAATCCAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR TCA 90 bp GACCTGAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGACAGGGTCCAAGCTTTaGTCTCCATTACATCCTAGA +
Preference number: 4 (lower is better)
Translates to: DLREVWEPHPKGNYPPSWTGSKL*SPLHPR
Trigger: TCTAGGATGTAATGGAGATCAAAGCTTGGACCCTGT...CCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTCAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp GAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGACAGGGTCCAAGCTTTaGTCTCCATTACATCCTAGA +
Preference number: 4 (lower is better)
Translates to: EGGVGAPSQRELPTLLGQTGSKL*SPLHPR
Trigger: TCTAGGATGTAATGGAGATCAAAGCTTGGACCCTGT...CTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp CATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCCGCAGCACCATGGTATaGTCAGATTGGTCTACGCAG +
Preference number: 4 (lower is better)
Translates to: HRLPTHRGAALRGSIITVRSTMV*SDWSTQ
Trigger: CTGCGTAGACCAATCTGAGCATACCATGGTGCTGCG...GACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp TGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATACGGCAGCGGGGGACTaGTGGGTCACAGAGACTGGG +
Preference number: 4 (lower is better)
Translates to: CLWQTQFSCFLVLHSAQYTAAGD*WVTETG
Trigger: CCCAGTCTCTGTGACCCAGCAGTCCCCCGCTGCCGT...ATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp TTTCGGACACTGGGCGTGGCCGTTGCGTTGGAGAGGTCATCGTGTGATTGGCTCTTGGTCCACTTCTGCTaGATGGGGTTGTCGAGTTCA +
Preference number: 4 (lower is better)
Translates to: FRTLGVAVALERSSCDWLLVHFC*MGLSSS
Trigger: TGAACTCGACAACCCCATGCAGCAGAAGTGGACCAA...GAGCCAATCACACGATGACCTCTCCAACGCAACGGCCACGCCCAGTGTCCGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR GCA 90 bp ATCATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCAAGGGGGAGTCTAATTTaGCGTCTATACGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: IIIVSQHTEVQPCVAPSSRGSLI*RLYGAG
Trigger: CCCGGCCCCGTATAGACGGCAAATTAGACTCCCCCT...TGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGATGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp TCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTGTCCCTGCATCATCCTaGACTGAGGCTTCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: SSSPNTQRCSLAWLHHHSVPASS*TEASRD
Trigger: ATCCCTGGAAGCCTCAGTGCAGGATGATGCAGGGAC...ACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp ATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGACGGGTTGTCTCGTCTaGTTCCTGGACACTTGTGGG +
Preference number: 4 (lower is better)
Translates to: IIVSQHTEVQPCVAPSSQTGCLV*FLDTCG
Trigger: CCCACAAGTGTCCAGGAAGCAGACGAGACAACCCGT...CTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp ATAAGGGAAGAAGGGTCAGCTGAAGAGCTGAGCACCCTGGGACTCCGCTCAGGGTCAGCAGGAGGCAAATaGTTCTGGGGAATACCCACA +
Preference number: 4 (lower is better)
Translates to: IREEGSAEELSTLGLRSGSAGGK*FWGIPT
Trigger: TGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGA...CCCTGAGCGGAGTCCCAGGGTGCTCAGCTCTTCAGCTGACCCTTCTTCCCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp ATCATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCAAGAGGCAGACACTGGTaGTGGTCTGAGTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: IIIVSQHTEVQPCVAPSSRGRHW*WSEWGP
Trigger: AGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCT...TGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp GGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCCGGAATGTCACAGCCTGGCTaGCTACTGCCTTTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: GPGSAGGKCFWGIPTHAGMSQPG*LLPFKG
Trigger: TCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGACAT...TCCGGCATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp GACCTGAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGCAGACTCAGTTTTCTTaGTTCCTGGTCCTGCATTCT +
Preference number: 4 (lower is better)
Translates to: DLREVWEPHPKGNYPPSWQTQFS*FLVLHS
Trigger: AGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTG...CCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTCAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp GGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCCGGAGGCAACGCAGCACCATaGTATGCTCAGATTGGTCTA +
Preference number: 4 (lower is better)
Translates to: GPGSAGGKCFWGIPTHAGGNAAP*YAQIGL
Trigger: TAGACCAATCTGAGCATACCATGGTGCTGCGTTGCC...TCCGGCATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp CTTGGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCGTGGTAGGTCTCCATaGAGACGGCAGCGGGGGACT +
Preference number: 4 (lower is better)
Translates to: LGLSVADSVFLLPGPAFCRGRSP*RRQRGT
Trigger: AGTCCCCCGCTGCCGTCTCCATGGAGACCTACCACG...GCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp ATCATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACTGGGGCATCATGGGTaGCTTCTCACTGGGTACCAG +
Preference number: 4 (lower is better)
Translates to: IIIVSQHTEVQPCVAPSSLGHHG*LLTGYQ
Trigger: CTGGTACCCAGTGAGAAGCCACCCATGATGCCCCAG...TGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp TCCTCCCACACCATCCATGTCACAGCCTGGCTGCCTACTGCCTTTCAAAGGATAGAGCCTGGGGCATCATaGGTGGCTTCTCACTGGGTA +
Preference number: 4 (lower is better)
Translates to: SSHTIHVTAWLPTAFQRIEPGAS*VASHWV
Trigger: TACCCAGTGAGAAGCCACCCATGATGCCCCAGGCTC...TATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGACATGGATGGTGTGGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp TTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTCAGCCCTCGCGGGCTTaGTCCACTTCTGCTGCATGG +
Preference number: 4 (lower is better)
Translates to: FLLPGPAFCPISCSSLPGQPSRA*STSAAW
Trigger: CCATGCAGCAGAAGTGGACCAAGCCCGCGAGGGCTG...ACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAGGAAGCAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp ACAGAAAAGAAGGGTCACCTGGGAGAGATGCCCTCTATCATCTGTTCACGGAGGTTCGAGACAGTGGTCTaGAGGGGGAGCCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: TEKKGHLGEMPSIICSRRFETVV*RGSPQA
Trigger: TGCCTGTGGGCTCCCCCTCCAGACCACTGTCTCGAA...CCTCCGTGAACAGATGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp ACCATTGGCCTTGGGTTTGGATTTGAAGGAAAAGCGCTTGATAAGGCGGCGAGATGCCATGGTGGCTGCTaGTCCCAGGGCTTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TIGLGFGFEGKALDKAARCHGGC*SQGFPW
Trigger: CCAGGGAAAGCCCTGGGACCAGCAGCCACCATGGCA...TCTCGCCGCCTTATCAAGCGCTTTTCCTTCAAATCCAAACCCAAGGCCAATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR CCA 90 bp GTCACAGCCTGGCTGCCTACTGCCTTTCAAAGGATAACCAGTTGTCCAGTTTATTGGCCACCCGCCCACTaGGCTCTGTCAGCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: VTAWLPTAFQRITSCPVYWPPAH*ALSAGE
Trigger: TTCGCCAGCTGACAGAGCCCAGTGGGCGGGTGGCCA...ATAAACTGGACAACTGGTTATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp CATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCACTCGTCCTGAGCAATaGGCACCTTGGAAACACCAG +
Preference number: 4 (lower is better)
Translates to: HRLPTHRGAALRGSIITVTRPEQ*APWKHQ
Trigger: CTGGTGTTTCCAAGGTGCCCATTGCTCAGGACGAGT...GACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp CTTGGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCCAGAGGGCTTTCCTaGCCCAGGCACTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: LGLSVADSVFLLPGPAFCPRGLS*PRHWRS
Trigger: GGATCTCCAGTGCCTGGGCCAGGAAAGCCCTCTGGG...GCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp CATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCAGGTGCAGCCTTGCGTaGCTCCATCATCACAGTCTT +
Preference number: 4 (lower is better)
Translates to: HRLPTHRGAALRGSIITVRCSLA*LHHHSL
Trigger: AAGACTGTGATGATGGAGCCACGCAAGGCTGCACCT...GACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp TCCTCCCACACCATCCATGTCACAGCCTGGCTGCCTACTGCCTTTCAAAGGATAAAGCCGTTGGAAAGGTaGCTGTCCCGGCTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: SSHTIHVTAWLPTAFQRIKPLER*LSRLLL
Trigger: TAGCAGCAGCCGGGACAGCCACCTTTCCAACGGCTT...TATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGACATGGATGGTGTGGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648610.2
CDS-3UTR CCA 90 bp CCCCTTCTTCCCTGCAGGAACTTCTTAGCAGATCCACAATGTGTGTCATCTACCCAGGGTCCAAGCCGTTaGAAAGGTGGCTGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: PLLPCRNFLADPQCVSSTQGPSR*KGGCPG
Trigger: GCCGGGACAGCCACCTTTCCAACGGCTTGGACCCTG...GGTAGATGACACACATTGTGGATCTGCTAAGAAGTTCCTGCAGGGAAGAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648610.2
CDS-3UTR TCA 90 bp TCCTCCCACACCATCCATGTCACAGCCTGGCTGCCTACTGCCTTTCAAAGGATATCTCCCGGAAAGACTTaGAGGCGAAGAGTGACGCCA +
Preference number: 4 (lower is better)
Translates to: SSHTIHVTAWLPTAFQRISPGKT*RRRVTP
Trigger: TGGCGTCACTCTTCGCCTTCAAGTCTTTCCGGGAGA...TATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGACATGGATGGTGTGGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp ACAGAAAAGAAGGGTCACCTGGGAGAGATGCCCTCTATCATCTGTTCACGGAGGTCACTTTGTGATCCTTaGGGCTGCGGGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TEKKGHLGEMPSIICSRRSLCDP*GCGSPG
Trigger: CCCTGGAGACCCGCAGCCTCAAGGATCACAAAGTGA...CCTCCGTGAACAGATGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp TTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTGGAAGAAGGGTCAGCTaGAGAGCTGAGCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: FLLPGPAFCPISCSSLPGGRRVS*RAEHPG
Trigger: CCCAGGGTGCTCAGCTCTTCAGCTGACCCTTCTTCC...ACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAGGAAGCAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp ACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGGAGGAGGGTGAGGGTTaGAAAACTACCTATTGGGTA +
Preference number: 4 (lower is better)
Translates to: TFSEADTGAGLSGDLREVEEGEG*KTTYWV
Trigger: TACCCAATAGGTAGTTTTTCAACCCTCACCCTCCTC...CACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp CATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCAAGGTGGGAGGAGGGTaGGGGTTGAAAAACTACCTA +
Preference number: 4 (lower is better)
Translates to: HRLPTHRGAALRGSIITVKVGGG*GLKNYL
Trigger: TAGGTAGTTTTTCAACCCTCACCCTCCTCCCACCTT...GACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp ATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGAGCACAGTTCCTCGGTaGCTTCCAGCTCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: IIVSQHTEVQPCVAPSSQSTVPR*LPAHFP
Trigger: TGGGAAATGAGCTGGAAGGCACCGAGGAACTGTGCT...CTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp ACAGAAAAGAAGGGTCACCTGGGAGAGATGCCCTCTATCATCTGTTCACGGAGGAGGGGGAGTCTAATTTaGCGTCTATACGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: TEKKGHLGEMPSIICSRRRGSLI*RLYGAG
Trigger: CCCGGCCCCGTATAGACGGCAAATTAGACTCCCCCT...CCTCCGTGAACAGATGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp TCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTTATTGCTGGGGCCACTaGTCTCACTCAGCACAGTTG +
Preference number: 4 (lower is better)
Translates to: SSSPNTQRCSLAWLHHHSYCWGH*SHSAQL
Trigger: CAACTGTGCTGAGTGAGAGCAGTGGCCCCAGCAATA...ACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp ATCATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCATGCTATGGGAGGTATTaGTGGGGCCACTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: IIIVSQHTEVQPCVAPSSCYGRY*WGHCSH
Trigger: GTGAGAGCAGTGGCCCCAGCAATACCTCCCATAGCA...TGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp ACCATTGGCCTTGGGTTTGGATTTGAAGGAAAAGCGCTTGATAAGGCGGCGAGAACTGGGCGTGGCCGTTaGGTTGGAGAGGTCATCGTG +
Preference number: 4 (lower is better)
Translates to: TIGLGFGFEGKALDKAARTGRGR*VGEVIV
Trigger: CACGATGACCTCTCCAACGCAACGGCCACGCCCAGT...TCTCGCCGCCTTATCAAGCGCTTTTCCTTCAAATCCAAACCCAAGGCCAATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR GCA 90 bp CTTGGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCACTGGGCGTGGCCGTTaGGTTGGAGAGGTCATCGTG +
Preference number: 4 (lower is better)
Translates to: LGLSVADSVFLLPGPAFCTGRGR*VGEVIV
Trigger: CACGATGACCTCTCCAACGCAACGGCCACGCCCAGT...GCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp TATGAGGAAACTGAGGTCCCCAAAGGAGAAGTTGCCTGCTCAAGATCACTTGGTGTCCTCGGCACCGGGTaGCCACCTCTCATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: YEETEVPKGEVACSRSLGVLGTG*PPLMCF
Trigger: GAAGCACATGAGAGGTGGGCACCCGGTGCCGAGGAC...ACCAAGTGATCTTGAGCAGGCAACTTCTCCTTTGGGGACCTCAGTTTCCTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp TCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCTGCTCTCTGTGAGCTaGCAACATTCTCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SSSPNTQRCSLAWLHHHSLLSVS*QHSQRQ
Trigger: CTGCCTCTGAGAATGTTGGCAGCTCACAGAGAGCAG...ACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp CTCTGTGAGCTGCCAACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGATGTCACAGCCTGGCTaGCTACTGCCTTTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: LCELPTFSEADTGAGLSGMSQPG*LLPFKG
Trigger: TCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGACAT...CCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGTTGGCAGCTCACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp ATAAGGGAAGAAGGGTCAGCTGAAGAGCTGAGCACCCTGGGACTCCGCTCAGGGCTACCCAAAGGCATGTaGCCTAAACACCCTGAGATA +
Preference number: 4 (lower is better)
Translates to: IREEGSAEELSTLGLRSGLPKGM*PKHPEI
Trigger: TATCTCAGGGTGTTTAGGGCACATGCCTTTGGGTAG...CCCTGAGCGGAGTCCCAGGGTGCTCAGCTCTTCAGCTGACCCTTCTTCCCTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp GTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGTATTCCGGGAGGGCTGCGTaGGCAGAGCTGACACTGACA +
Preference number: 4 (lower is better)
Translates to: VLHSAQYPVAAYLVQVLYSGRAA*AELTLT
Trigger: TGTCAGTGTCAGCTCTGCGCACGCAGCCCTCCCGGA...ATACAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648610.2
CDS-3UTR CCA 90 bp TGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATGCTCTGGGTGGGAGTTaGGGCACCTCCTCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: CLWQTQFSCFLVLHSAQYALGGS*GTSSKA
Trigger: CGCCTTTGAGGAGGTGCCCCAACTCCCACCCAGAGC...ATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp GTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGTATGATGCTGGCTCTGGGTaGGAGTTGGGGCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: VLHSAQYPVAAYLVQVLYDAGSG*ELGHLL
Trigger: GAGGAGGTGCCCCAACTCCCACCCAGAGCCAGCATC...ATACAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp GCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGAAAAGAAGGGTCACCGGCAACGCAGCACCATaGTATGCTCAGATTGGTCTA +
Preference number: 4 (lower is better)
Translates to: APSQRELPTLLGQKRRVTGNAAP*YAQIGL
Trigger: TAGACCAATCTGAGCATACCATGGTGCTGCGTTGCC...GGTGACCCTTCTTTTCTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp GCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGAAAAGAAGGGTCACCGACTTCCAACTGTGTTaGTGGCAGTGTCAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: APSQRELPTLLGQKRRVTDFQLC*WQCQSD
Trigger: GTCACTCTGACACTGCCACCAACACAGTTGGAAGTC...GGTGACCCTTCTTTTCTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp CAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACTGGGTGGCTTCTCACTaGGTACCAGGCCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QFSCFLVLHSAQYPVAAYWVASH*VPGLLG
Trigger: CCCCAGGAGGCCTGGTACCCAGTGAGAAGCCACCCA...GTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp GCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGAAAAGAAGGGTCACCTCCACTTCTGCTGCATaGGGTTGTCGAGTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: APSQRELPTLLGQKRRVTSTSAA*GCRVQL
Trigger: TAGCTGAACTCGACAACCCCATGCAGCAGAAGTGGA...GGTGACCCTTCTTTTCTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp GATCTCCATTACATCCTAGAAGGAGCAGCCTGTTCCAGAAAGGGGAATGAAGACGAAGCTCCACTGCCATaGTGGCTGCTGGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: DLHYILEGAACSRKGNEDEAPLP*WLLVPG
Trigger: CCCTGGGACCAGCAGCCACCATGGCAGTGGAGCTTC...GTCTTCATTCCCCTTTCTGGAACAGGCTGCTCCTTCTAGGATGTAATGGAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp ATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTATGGGAGGTATTGCTaGGGCCACTGCTCTCACTCA +
Preference number: 4 (lower is better)
Translates to: IIVSQHTEVQPCVAPSSQYGRYC*GHCSHS
Trigger: TGAGTGAGAGCAGTGGCCCCAGCAATACCTCCCATA...CTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp GTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGTATTGGTGGGTGTCTTCTTaGCCACCCGCCCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: VLHSAQYPVAAYLVQVLYWWVSS*PPAHWA
Trigger: AGCCCAGTGGGCGGGTGGCCAAGAAGACACCCACCA...ATACAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp CCCCTTCTTCCCTGCAGGAACTTCTTAGCAGATCCACAATGTGTGTCATCTACCGAGTGCTGCGCTTGGTaGGTGTCTTCTTGGCCACCC +
Preference number: 4 (lower is better)
Translates to: PLLPCRNFLADPQCVSSTECCAW*VSSWPP
Trigger: GGGTGGCCAAGAAGACACCCACCAAGCGCAGCACTC...GGTAGATGACACACATTGTGGATCTGCTAAGAAGTTCCTGCAGGGAAGAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp CTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGTCTCCAGGGCACCAGTaGACCCCGTTTCCGACTCAA +
Preference number: 4 (lower is better)
Translates to: LVLHSAQYPVAAYLVQVLSPGHQ*TPFPTQ
Trigger: TTGAGTCGGAAACGGGGTCCACTGGTGCCCTGGAGA...CAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp TCCTCCCACACCATCCATGTCACAGCCTGGCTGCCTACTGCCTTTCAAAGGATAGCGTGGCCGTTGCGTTaGAGAGGTCATCGTGTGATT +
Preference number: 4 (lower is better)
Translates to: SSHTIHVTAWLPTAFQRIAWPLR*RGHRVI
Trigger: AATCACACGATGACCTCTCCAACGCAACGGCCACGC...TATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGACATGGATGGTGTGGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp CTTGGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCTTCGGACACTGGGCGTaGCCGTTGCGTTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: LGLSVADSVFLLPGPAFCFGHWA*PLRWRG
Trigger: ACCTCTCCAACGCAACGGCCACGCCCAGTGTCCGAA...GCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp ACCATTGGCCTTGGGTTTGGATTTGAAGGAAAAGCGCTTGATAAGGCGGCGAGACCTTCTTTCGGACACTaGGCGTGGCCGTTGCGTTGG +
Preference number: 4 (lower is better)
Translates to: TIGLGFGFEGKALDKAARPSFGH*AWPLRW
Trigger: CCAACGCAACGGCCACGCCCAGTGTCCGAAAGAAGG...TCTCGCCGCCTTATCAAGCGCTTTTCCTTCAAATCCAAACCCAAGGCCAATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR CCA 90 bp AGATCACTTGGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCAGACCTGAGGGAGGTGTaGGAGCCCCATCCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: RSLGLSVADSVFLLPGPADLREV*EPHPKG
Trigger: CCCTTTGGGATGGGGCTCCCACACCTCCCTCAGGTC...TGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAGTGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp TCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTAGGTGCAGCCTTGCGTaGCTCCATCATCACAGTCTT +
Preference number: 4 (lower is better)
Translates to: SSSPNTQRCSLAWLHHHSRCSLA*LHHHSL
Trigger: AAGACTGTGATGATGGAGCCACGCAAGGCTGCACCT...ACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR TCA 90 bp AGATCACTTGGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCACGCAGGTCACATGACTaGTGCTGGCTCTGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: RSLGLSVADSVFLLPGPARRSHD*CWLWVG
Trigger: TCCCACCCAGAGCCAGCATCAGTCATGTGACCTGCG...TGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAGTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp TTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTAGCGCCAACTCGTCCTaGGCAATGGGCACCTTGGAA +
Preference number: 4 (lower is better)
Translates to: FLLPGPAFCPISCSSLPGSANSS*AMGTLE
Trigger: TTCCAAGGTGCCCATTGCTCAGGACGAGTTGGCGCT...ACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAGGAAGCAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp GTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGTATTGCATCATCCTGCACTaGGGCTTCCAGGGATGCCGC +
Preference number: 4 (lower is better)
Translates to: VLHSAQYPVAAYLVQVLYCIILH*GFQGCR
Trigger: GCGGCATCCCTGGAAGCCTCAGTGCAGGATGATGCA...ATACAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp TTGGCCTTGGGTTTGGATTTGAAGGAAAAGCGCTTGATAAGGCGGCGAGAAAAGTGCATCATCCTGCACTaGGGCTTCCAGGGATGCCGC +
Preference number: 4 (lower is better)
Translates to: LALGLDLKEKRLIRRREKCIILH*GFQGCR
Trigger: GCGGCATCCCTGGAAGCCTCAGTGCAGGATGATGCA...CTTTTCTCGCCGCCTTATCAAGCGCTTTTCCTTCAAATCCAAACCCAAGGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR TCA 90 bp AGATCACTTGGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATGCATCATCCTGCACTaGGGCTTCCAGGGATGCCGC +
Preference number: 4 (lower is better)
Translates to: RSLGLSVADSVFLLPGPACIILH*GFQGCR
Trigger: GCGGCATCCCTGGAAGCCTCAGTGCAGGATGATGCA...TGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAGTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp CCCCTTCTTCCCTGCAGGAACTTCTTAGCAGATCCACAATGTGTGTCATCTACCGGAGAGGTCATCGTGTaGTTGGCTCAGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PLLPCRNFLADPQCVSSTGEVIV*LAQASF
Trigger: GAAGCTGGCCTGAGCCAATCACACGATGACCTCTCC...GGTAGATGACACACATTGTGGATCTGCTAAGAAGTTCCTGCAGGGAAGAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp ATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGAGGCTGGAAGTGACCTaGATGTTTATCCAGGTCACC +
Preference number: 4 (lower is better)
Translates to: IIVSQHTEVQPCVAPSSQRLEVT*MFIQVT
Trigger: GGTGACCTGGATAAACATTCAGGTCACTTCCAGCCT...CTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp CATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCGAGGAGGGTGAGGGTTaGAAAACTACCTATTGGGTA +
Preference number: 4 (lower is better)
Translates to: HRLPTHRGAALRGSIITVEEGEG*KTTYWV
Trigger: TACCCAATAGGTAGTTTTTCAACCCTCACCCTCCTC...GACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp TATGAGGAAACTGAGGTCCCCAAAGGAGAAGTTGCCTGCTCAAGATCACTTGGTTGGAGCTCCCGTTTCTaGAGGCCTGCTCGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: YEETEVPKGEVACSRSLGWSSRF*RPARSA
Trigger: CGCTGAACGAGCAGGCCTGCAGAAACGGGAGCTCCA...ACCAAGTGATCTTGAGCAGGCAACTTCTCCTTTGGGGACCTCAGTTTCCTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp ACAGAAAAGAAGGGTCACCTGGGAGAGATGCCCTCTATCATCTGTTCACGGAGGGGCTTGGTCCACTTCTaGTGCATGGGGTTGTCGAGT +
Preference number: 4 (lower is better)
Translates to: TEKKGHLGEMPSIICSRRGLVHF*CMGLSS
Trigger: ACTCGACAACCCCATGCAGCAGAAGTGGACCAAGCC...CCTCCGTGAACAGATGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp ACAGAAAAGAAGGGTCACCTGGGAGAGATGCCCTCTATCATCTGTTCACGGAGGATAGTGAAGCTCCACTaGCATGGTGGCTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: TEKKGHLGEMPSIICSRRIVKLH*HGGCWS
Trigger: GGACCAGCAGCCACCATGGCAGTGGAGCTTCACTAT...CCTCCGTGAACAGATGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp AGATCACTTGGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCAACTGGGCGTGGCCGTTaGGTTGGAGAGGTCATCGTG +
Preference number: 4 (lower is better)
Translates to: RSLGLSVADSVFLLPGPATGRGR*VGEVIV
Trigger: CACGATGACCTCTCCAACGCAACGGCCACGCCCAGT...TGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAGTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp ATCATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCATGCCCACCTCTCATGTaGTTCCCGTTCCAAGTATCC +
Preference number: 4 (lower is better)
Translates to: IIIVSQHTEVQPCVAPSSCPPLM*FPFQVS
Trigger: GGATACTTGGAACGGGAAGCACATGAGAGGTGGGCA...TGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp TCCTCCCACACCATCCATGTCACAGCCTGGCTGCCTACTGCCTTTCAAAGGATATGCCCACCTCTCATGTaGTTCCCGTTCCAAGTATCC +
Preference number: 4 (lower is better)
Translates to: SSHTIHVTAWLPTAFQRICPPLM*FPFQVS
Trigger: GGATACTTGGAACGGGAAGCACATGAGAGGTGGGCA...TATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGACATGGATGGTGTGGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp ATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCAGCAGGAGGCAAATaGTTCTGGGGAATACCCACA +
Preference number: 4 (lower is better)
Translates to: IIVSQHTEVQPCVAPSSQSAGGK*FWGIPT
Trigger: TGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGA...CTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp TATGAGGAAACTGAGGTCCCCAAAGGAGAAGTTGCCTGCTCAAGATCACTTGGTGGCTGTCCCGGCTGCTaGTATGGGAGGTATTGCTGG +
Preference number: 4 (lower is better)
Translates to: YEETEVPKGEVACSRSLGGCPGC*YGRYCW
Trigger: CCAGCAATACCTCCCATAGCAGCAGCCGGGACAGCC...ACCAAGTGATCTTGAGCAGGCAACTTCTCCTTTGGGGACCTCAGTTTCCTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648610.2
CDS-3UTR CCA 90 bp CTTGGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCGGGTCTCTCCTAGCTTaGTCAGCAGTCGGACCCGTT +
Preference number: 4 (lower is better)
Translates to: LGLSVADSVFLLPGPAFCGSLLA*SAVGPV
Trigger: AACGGGTCCGACTGCTGACCAAGCTAGGAGAGACCC...GCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp ATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCCTCAAAGGCGATTTaGATGGAGCTCCCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: IIVSQHTEVQPCVAPSSQSSKAI*MELPFL
Trigger: CAGAAACGGGAGCTCCATCCAAATCGCCTTTGAGGA...CTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp ATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTTCCAACTGTGTTGGTaGCAGTGTCAGAGTGACGTG +
Preference number: 4 (lower is better)
Translates to: IIVSQHTEVQPCVAPSSQFQLCW*QCQSDV
Trigger: CACGTCACTCTGACACTGCCACCAACACAGTTGGAA...CTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp CTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGGTTGACCATCATGGCTaGCTGGGTGCTGACTATGGC +
Preference number: 4 (lower is better)
Translates to: LVLHSAQYPVAAYLVQVLVDHHG*LGADYG
Trigger: GCCATAGTCAGCACCCAGCCAGCCATGATGGTCAAC...CAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp ACCATTGGCCTTGGGTTTGGATTTGAAGGAAAAGCGCTTGATAAGGCGGCGAGAACAGGCAGTGTGGCCTaGCCTAGGAGTTCGGTGTCT +
Preference number: 4 (lower is better)
Translates to: TIGLGFGFEGKALDKAARTGSVA*PRSSVS
Trigger: AGACACCGAACTCCTAGGCCAGGCCACACTGCCTGT...TCTCGCCGCCTTATCAAGCGCTTTTCCTTCAAATCCAAACCCAAGGCCAATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR CCA 90 bp AGATCACTTGGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCGAGACAGTGGTCTaGAGGGGGAGCCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: RSLGLSVADSVFLLPGPAFETVV*RGSPQA
Trigger: TGCCTGTGGGCTCCCCCTCCAGACCACTGTCTCGAA...TGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAGTGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp GATCTCCATTACATCCTAGAAGGAGCAGCCTGTTCCAGAAAGGGGAATGAAGACCTGTCTTCGAGACAGTaGTCTGGAGGGGGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: DLHYILEGAACSRKGNEDLSSRQ*SGGGAH
Trigger: GTGGGCTCCCCCTCCAGACCACTGTCTCGAAGACAG...GTCTTCATTCCCCTTTCTGGAACAGGCTGCTCCTTCTAGGATGTAATGGAGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp ATCATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCAGTCTCGTCTGCTTCCTaGACACTTGTGGGACTAGAG +
Preference number: 4 (lower is better)
Translates to: IIIVSQHTEVQPCVAPSSVSSAS*TLVGLE
Trigger: CTCTAGTCCCACAAGTGTCCAGGAAGCAGACGAGAC...TGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp GGTTTGGATTTGAAGGAAAAGCGCTTGATAAGGCGGCGAGAAAAGCTGCCGGCCAGGTCATCGTGTGATTaGCTCAGGCCAGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: GLDLKEKRLIRRREKLPARSSCD*LRPASF
Trigger: GAAGGAAGCTGGCCTGAGCCAATCACACGATGACCT...GGCCGGCAGCTTTTCTCGCCGCCTTATCAAGCGCTTTTCCTTCAAATCCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR CCA 90 bp GCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGAAAAGAAGGGTCACCAAAAGAAGGGTCACCTaGGAGAGATGCCCTCTATCA +
Preference number: 4 (lower is better)
Translates to: APSQRELPTLLGQKRRVTKRRVT*ERCPLS
Trigger: TGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTT...GGTGACCCTTCTTTTCTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp ACAGAAAAGAAGGGTCACCTGGGAGAGATGCCCTCTATCATCTGTTCACGGAGGCTAAAGCCATCTCTCTaGGGAAGGCTTCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: TEKKGHLGEMPSIICSRRLKPSL*GRLPTR
Trigger: CCTGGTGGGAAGCCTTCCCCAGAGAGATGGCTTTAG...CCTCCGTGAACAGATGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp ACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGAGTTTTCTTGCTTCCTaGTCCTGCATTCTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: TFSEADTGAGLSGDLREVSFLAS*SCILPN
Trigger: ATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACT...CACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp CTTGGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCTCTCCCGGAAAGACTTaGAGGCGAAGAGTGACGCCA +
Preference number: 4 (lower is better)
Translates to: LGLSVADSVFLLPGPAFCSPGKT*RRRVTP
Trigger: TGGCGTCACTCTTCGCCTTCAAGTCTTTCCGGGAGA...GCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp CAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACAGCGCCAACTCGTCCTaGGCAATGGGCACCTTGGAA +
Preference number: 4 (lower is better)
Translates to: QFSCFLVLHSAQYPVAAYSANSS*AMGTLE
Trigger: TTCCAAGGTGCCCATTGCTCAGGACGAGTTGGCGCT...GTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp GGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCCGGAGGATCTATCAATCCCTaGAATTTGCCCACATTTCAG +
Preference number: 4 (lower is better)
Translates to: GPGSAGGKCFWGIPTHAGGSINP*NLPTFQ
Trigger: CTGAAATGTGGGCAAATTTCAGGGATTGATAGATCC...TCCGGCATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp ATCATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCAAGGCTGGAAGTGACCTaGATGTTTATCCAGGTCACC +
Preference number: 4 (lower is better)
Translates to: IIIVSQHTEVQPCVAPSSRLEVT*MFIQVT
Trigger: GGTGACCTGGATAAACATTCAGGTCACTTCCAGCCT...TGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp TTGGCCTTGGGTTTGGATTTGAAGGAAAAGCGCTTGATAAGGCGGCGAGAAAAGAAGCTTTGTGATCCTTaGGGCTGCGGGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LALGLDLKEKRLIRRREKKLCDP*GCGSPG
Trigger: CCCTGGAGACCCGCAGCCTCAAGGATCACAAAGCTT...CTTTTCTCGCCGCCTTATCAAGCGCTTTTCCTTCAAATCCAAACCCAAGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR GCA 90 bp GATCTCCATTACATCCTAGAAGGAGCAGCCTGTTCCAGAAAGGGGAATGAAGACTGTCCCCTGGGCTGCTaGTATGGGAGGTATTGCTGG +
Preference number: 4 (lower is better)
Translates to: DLHYILEGAACSRKGNEDCPLGC*YGRYCW
Trigger: CCAGCAATACCTCCCATAGCAGCAGCCCAGGGGACA...GTCTTCATTCCCCTTTCTGGAACAGGCTGCTCCTTCTAGGATGTAATGGAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336702.7
CDS-3UTR GCA 90 bp ACCATTGGCCTTGGGTTTGGATTTGAAGGAAAAGCGCTTGATAAGGCGGCGAGAGCGAATCGCTGTCTCTaGTACAGGGTCCAAGCCGTT +
Preference number: 4 (lower is better)
Translates to: TIGLGFGFEGKALDKAARANRCL*YRVQAV
Trigger: AACGGCTTGGACCCTGTAGCAGAGACAGCGATTCGC...TCTCGCCGCCTTATCAAGCGCTTTTCCTTCAAATCCAAACCCAAGGCCAATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR GCA 90 bp TTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTGCGAATCGCTGTCTCTaGTACAGGGTCCAAGCCGTT +
Preference number: 4 (lower is better)
Translates to: FLLPGPAFCPISCSSLPGANRCL*YRVQAV
Trigger: AACGGCTTGGACCCTGTAGCAGAGACAGCGATTCGC...ACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAGGAAGCAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp CTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGTGCCCACCTCTCATGTaGTTCCCGTTCCAAGTATCC +
Preference number: 4 (lower is better)
Translates to: LVLHSAQYPVAAYLVQVLCPPLM*FPFQVS
Trigger: GGATACTTGGAACGGGAAGCACATGAGAGGTGGGCA...CAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp GATCTCCATTACATCCTAGAAGGAGCAGCCTGTTCCAGAAAGGGGAATGAAGACAGAGGCAGACACTGGTaGTGGTCTGAGTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: DLHYILEGAACSRKGNEDRGRHW*WSEWGP
Trigger: AGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCT...GTCTTCATTCCCCTTTCTGGAACAGGCTGCTCCTTCTAGGATGTAATGGAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp ACAGAAAAGAAGGGTCACCTGGGAGAGATGCCCTCTATCATCTGTTCACGGAGGCTGCTCTCTGTGAGCTaGCAACATTCTCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TEKKGHLGEMPSIICSRRLLSVS*QHSQRQ
Trigger: CTGCCTCTGAGAATGTTGGCAGCTCACAGAGAGCAG...CCTCCGTGAACAGATGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR GCA 90 bp ATCATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCAAGCCTGGCTGCCTACTaGCTTTCAAAGGATAACCAG +
Preference number: 4 (lower is better)
Translates to: IIIVSQHTEVQPCVAPSSSLAAY*LSKDNQ
Trigger: CTGGTTATCCTTTGAAAGGCAGTAGGCAGCCAGGCT...TGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp CTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGCTTCCATCCTTTCTCTaGACACCCCTTCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LVLHSAQYPVAAYLVQVLLPSFL*TPLLPC
Trigger: GCAGGGAAGAAGGGGTGTGCAGAGAAAGGATGGAAG...CAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp CTCATGTGCTTCCCGTTCCAAGTATCCTTCCAACCGGCCCCATGGCCCAGGGTGGTAACAATTTCCACATaGTATCTACCCAAAGGCATG +
Preference number: 4 (lower is better)
Translates to: LMCFPFQVSFQPAPWPRVVTIST*YLPKGM
Trigger: CATGCCTTTGGGTAGATAGCATGTGGAAATTGTTAC...CACCCTGGGCCATGGGGCCGGTTGGAAGGATACTTGGAACGGGAAGCACATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp TATGAGGAAACTGAGGTCCCCAAAGGAGAAGTTGCCTGCTCAAGATCACTTGGTACAGGCAGTGTGGCCTaGCCTAGGAGTTCGGTGTCT +
Preference number: 4 (lower is better)
Translates to: YEETEVPKGEVACSRSLGTGSVA*PRSSVS
Trigger: AGACACCGAACTCCTAGGCCAGGCCACACTGCCTGT...ACCAAGTGATCTTGAGCAGGCAACTTCTCCTTTGGGGACCTCAGTTTCCTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp TCTTCCCTGCAGGAACTTCTTAGCAGATCCACAATGTGTGTCATCTACCCAACCCTGGGCTCTGTCAGCTaGCGAATCGCTGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SSLQELLSRSTMCVIYPTLGSVS*RIAVSA
Trigger: AGCAGAGACAGCGATTCGCCAGCTGACAGAGCCCAG...GGTTGGGTAGATGACACACATTGTGGATCTGCTAAGAAGTTCCTGCAGGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp TATGAGGAAACTGAGGTCCCCAAAGGAGAAGTTGCCTGCTCAAGATCACTTGGTTCTCCAGGGCACCAGTaGACCCCGTTTCCGACTCAA +
Preference number: 4 (lower is better)
Translates to: YEETEVPKGEVACSRSLGSPGHQ*TPFPTQ
Trigger: TTGAGTCGGAAACGGGGTCCACTGGTGCCCTGGAGA...ACCAAGTGATCTTGAGCAGGCAACTTCTCCTTTGGGGACCTCAGTTTCCTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp GTCACAGCCTGGCTGCCTACTGCCTTTCAAAGGATAACCAGTTGTCCAGTTTATAGCTCATTTCCCAAGTaGGATGCCCGAAGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: VTAWLPTAFQRITSCPVYSSFPK*DARSCR
Trigger: ACGGCAGCTTCGGGCATCTCACTTGGGAAATGAGCT...ATAAACTGGACAACTGGTTATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp CTCTGTGAGCTGCCAACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGGATCTATCAATCCCTaGAATTTGCCCACATTTCAG +
Preference number: 4 (lower is better)
Translates to: LCELPTFSEADTGAGLSGGSINP*NLPTFQ
Trigger: CTGAAATGTGGGCAAATTTCAGGGATTGATAGATCC...CCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGTTGGCAGCTCACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp CCCCTTCTTCCCTGCAGGAACTTCTTAGCAGATCCACAATGTGTGTCATCTACCTATTGCTGGGGCCACTaGTCTCACTCAGCACAGTTG +
Preference number: 4 (lower is better)
Translates to: PLLPCRNFLADPQCVSSTYCWGH*SHSAQL
Trigger: CAACTGTGCTGAGTGAGAGCAGTGGCCCCAGCAATA...GGTAGATGACACACATTGTGGATCTGCTAAGAAGTTCCTGCAGGGAAGAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp CAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACGCGAATCGCTGTCTCTaGTACAGGGTCCAAGCCGTT +
Preference number: 4 (lower is better)
Translates to: QFSCFLVLHSAQYPVAAYANRCL*YRVQAV
Trigger: AACGGCTTGGACCCTGTAGCAGAGACAGCGATTCGC...GTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp GATCTCCATTACATCCTAGAAGGAGCAGCCTGTTCCAGAAAGGGGAATGAAGACACGGGTTGTCTCGTCTaGTTCCTGGACACTTGTGGG +
Preference number: 4 (lower is better)
Translates to: DLHYILEGAACSRKGNEDTGCLV*FLDTCG
Trigger: CCCACAAGTGTCCAGGAAGCAGACGAGACAACCCGT...GTCTTCATTCCCCTTTCTGGAACAGGCTGCTCCTTCTAGGATGTAATGGAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp TTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGTGGCAGACTTCACCTCTATaGATGCAATATATGCATGTA +
Preference number: 4 (lower is better)
Translates to: FSEADTGAGLSGDLREVWQTSPL*MQYMHV
Trigger: TACATGCATATATTGCATGCATAGAGGTGAAGTCTG...CCACACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp GTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGTATTCCTCAGCAGAGAGCTaGCAACGCAGCACCATGGTA +
Preference number: 4 (lower is better)
Translates to: VLHSAQYPVAAYLVQVLYSSAES*QRSTMV
Trigger: TACCATGGTGCTGCGTTGCCAGCTCTCTGCTGAGGA...ATACAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp TGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATTCCTCAGCAGAGAGCTaGCAACGCAGCACCATGGTA +
Preference number: 4 (lower is better)
Translates to: CLWQTQFSCFLVLHSAQYSSAES*QRSTMV
Trigger: TACCATGGTGCTGCGTTGCCAGCTCTCTGCTGAGGA...ATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp ACAGAAAAGAAGGGTCACCTGGGAGAGATGCCCTCTATCATCTGTTCACGGAGGGACTTCCAACTGTGTTaGTGGCAGTGTCAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: TEKKGHLGEMPSIICSRRDFQLC*WQCQSD
Trigger: GTCACTCTGACACTGCCACCAACACAGTTGGAAGTC...CCTCCGTGAACAGATGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp TGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATCTTCACCTCTCTCCCTaGCCTGAAGCTTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: CLWQTQFSCFLVLHSAQYLHLSP*PEAWEA
Trigger: TGCTTCCCAAGCTTCAGGCCAGGGAGAGAGGTGAAG...ATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp CATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCTCAGTTCCTCAATTGTaGAGAGCTCCACTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: HRLPTHRGAALRGSIITVSVPQL*RAPLVL
Trigger: AAGAACAAGTGGAGCTCTCCACAATTGAGGAACTGA...GACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp TGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATGTTGACCATCATGGCTaGCTGGGTGCTGACTATGGC +
Preference number: 4 (lower is better)
Translates to: CLWQTQFSCFLVLHSAQYVDHHG*LGADYG
Trigger: GCCATAGTCAGCACCCAGCCAGCCATGATGGTCAAC...ATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp ACAGAAAAGAAGGGTCACCTGGGAGAGATGCCCTCTATCATCTGTTCACGGAGGTCCACTTCTGCTGCATaGGGTTGTCGAGTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: TEKKGHLGEMPSIICSRRSTSAA*GCRVQL
Trigger: TAGCTGAACTCGACAACCCCATGCAGCAGAAGTGGA...CCTCCGTGAACAGATGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp TTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTATGGGAGGTATTGCTaGGGCCACTGCTCTCACTCA +
Preference number: 4 (lower is better)
Translates to: FLLPGPAFCPISCSSLPGYGRYC*GHCSHS
Trigger: TGAGTGAGAGCAGTGGCCCCAGCAATACCTCCCATA...ACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAGGAAGCAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp ACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGAATATCATCCACAGATaGCCTCTCAGAAATATCCGA +
Preference number: 4 (lower is better)
Translates to: TFSEADTGAGLSGDLREVNIIHR*PLRNIR
Trigger: TCGGATATTTCTGAGAGGCCATCTGTGGATGATATT...CACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp GTGGGGAATGGGCTGAGAGAACTCGTGCCCTTTCAGAGCTGGGTCCTCAGAGCTAATATCATCCACAGATaGCCTCTCAGAAATATCCGA +
Preference number: 4 (lower is better)
Translates to: VGNGLRELVPFQSWVLRANIIHR*PLRNIR
Trigger: TCGGATATTTCTGAGAGGCCATCTGTGGATGATATT...AGCTCTGAGGACCCAGCTCTGAAAGGGCACGAGTTCTCTCAGCCCATTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR CCA 90 bp GATCTCCATTACATCCTAGAAGGAGCAGCCTGTTCCAGAAAGGGGAATGAAGACGCGTGGCCGTTGCGTTaGAGAGGTCATCGTGTGATT +
Preference number: 4 (lower is better)
Translates to: DLHYILEGAACSRKGNEDAWPLR*RGHRVI
Trigger: AATCACACGATGACCTCTCCAACGCAACGGCCACGC...GTCTTCATTCCCCTTTCTGGAACAGGCTGCTCCTTCTAGGATGTAATGGAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp ATCATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCAAATTACCCACCCTCCTaGGACAGAAAAGAAGGGTCA +
Preference number: 4 (lower is better)
Translates to: IIIVSQHTEVQPCVAPSSNYPPS*DRKEGS
Trigger: TGACCCTTCTTTTCTGTCCCAGGAGGGTGGGTAATT...TGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CCA 90 bp TCCTCCCACACCATCCATGTCACAGCCTGGCTGCCTACTGCCTTTCAAAGGATAAATTACCCACCCTCCTaGGACAGAAAAGAAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SSHTIHVTAWLPTAFQRINYPPS*DRKEGS
Trigger: TGACCCTTCTTTTCTGTCCCAGGAGGGTGGGTAATT...TATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGACATGGATGGTGTGGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp TCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTAGTTTTCTTGCTTCCTaGTCCTGCATTCTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: SSSPNTQRCSLAWLHHHSSFLAS*SCILPN
Trigger: ATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACT...ACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp TCTTCCCTGCAGGAACTTCTTAGCAGATCCACAATGTGTGTCATCTACCCAACCAGGAAACTCACTTTGTaGTCCTTGAGGCTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: SSLQELLSRSTMCVIYPTRKLTL*SLRLRV
Trigger: GACCCGCAGCCTCAAGGATCACAAAGTGAGTTTCCT...GGTTGGGTAGATGACACACATTGTGGATCTGCTAAGAAGTTCCTGCAGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp TCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTTTCCAGAAAGGGGAATaGAGACTAACCTGTACTAGT +
Preference number: 4 (lower is better)
Translates to: SSSPNTQRCSLAWLHHHSFQKGE*RLTCTS
Trigger: ACTAGTACAGGTTAGTCTTCATTCCCCTTTCTGGAA...ACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp GGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCCGGAGATAGCCATGATGATTaGAGTTCCCATTTTACAGAT +
Preference number: 4 (lower is better)
Translates to: GPGSAGGKCFWGIPTHAGDSHDD*SSHFTD
Trigger: ATCTGTAAAATGGGAACTTCAATCATCATGGCTATC...TCCGGCATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp TCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTATATCTCATATTTGGTaGGTAGTGTGGACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SSSPNTQRCSLAWLHHHSISHIW*VVWTGA
Trigger: TGCTCCTGTCCACACTACTCACCAAATATGAGATAT...ACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp CCCCTTCTTCCCTGCAGGAACTTCTTAGCAGATCCACAATGTGTGTCATCTACCAAGGTGGGAGGAGGGTaGGGGTTGAAAAACTACCTA +
Preference number: 4 (lower is better)
Translates to: PLLPCRNFLADPQCVSSTKVGGG*GLKNYL
Trigger: TAGGTAGTTTTTCAACCCTCACCCTCCTCCCACCTT...GGTAGATGACACACATTGTGGATCTGCTAAGAAGTTCCTGCAGGGAAGAAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp TGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATAGCACAGTTCCTCGGTaGCTTCCAGCTCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: CLWQTQFSCFLVLHSAQYSTVPR*LPAHFP
Trigger: TGGGAAATGAGCTGGAAGGCACCGAGGAACTGTGCT...ATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp GTCACAGCCTGGCTGCCTACTGCCTTTCAAAGGATAACCAGTTGTCCAGTTTATCTGCTCTCTGTGAGCTaGCAACATTCTCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VTAWLPTAFQRITSCPVYLLSVS*QHSQRQ
Trigger: CTGCCTCTGAGAATGTTGGCAGCTCACAGAGAGCAG...ATAAACTGGACAACTGGTTATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp TTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTAGCCTGGCTGCCTACTaGCTTTCAAAGGATAACCAG +
Preference number: 4 (lower is better)
Translates to: FLLPGPAFCPISCSSLPGSLAAY*LSKDNQ
Trigger: CTGGTTATCCTTTGAAAGGCAGTAGGCAGCCAGGCT...ACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAGGAAGCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp CTCAGGGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGGTAACAATTTCCACATaGTATCTACCCAAAGGCATG +
Preference number: 4 (lower is better)
Translates to: LRDQAQQEANASGEYPHMVTIST*YLPKGM
Trigger: CATGCCTTTGGGTAGATAGCATGTGGAAATTGTTAC...CATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp TTGGCCTTGGGTTTGGATTTGAAGGAAAAGCGCTTGATAAGGCGGCGAGAAAAGTATGGGAGGTATTGCTaGGGCCACTGCTCTCACTCA +
Preference number: 4 (lower is better)
Translates to: LALGLDLKEKRLIRRREKYGRYC*GHCSHS
Trigger: TGAGTGAGAGCAGTGGCCCCAGCAATACCTCCCATA...CTTTTCTCGCCGCCTTATCAAGCGCTTTTCCTTCAAATCCAAACCCAAGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR CCA 90 bp TCTTCCCTGCAGGAACTTCTTAGCAGATCCACAATGTGTGTCATCTACCCAACCACTCGTCCTGAGCAATaGGCACCTTGGAAACACCAG +
Preference number: 4 (lower is better)
Translates to: SSLQELLSRSTMCVIYPTTRPEQ*APWKHQ
Trigger: CTGGTGTTTCCAAGGTGCCCATTGCTCAGGACGAGT...GGTTGGGTAGATGACACACATTGTGGATCTGCTAAGAAGTTCCTGCAGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp GTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGTATACTCGTCCTGAGCAATaGGCACCTTGGAAACACCAG +
Preference number: 4 (lower is better)
Translates to: VLHSAQYPVAAYLVQVLYTRPEQ*APWKHQ
Trigger: CTGGTGTTTCCAAGGTGCCCATTGCTCAGGACGAGT...ATACAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp GATCTCCATTACATCCTAGAAGGAGCAGCCTGTTCCAGAAAGGGGAATGAAGACGTCTCGTCTGCTTCCTaGACACTTGTGGGACTAGAG +
Preference number: 4 (lower is better)
Translates to: DLHYILEGAACSRKGNEDVSSAS*TLVGLE
Trigger: CTCTAGTCCCACAAGTGTCCAGGAAGCAGACGAGAC...GTCTTCATTCCCCTTTCTGGAACAGGCTGCTCCTTCTAGGATGTAATGGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp GATCTCCATTACATCCTAGAAGGAGCAGCCTGTTCCAGAAAGGGGAATGAAGACGGAGGCAAATGCTTCTaGGGAATACCCACACATGCC +
Preference number: 4 (lower is better)
Translates to: DLHYILEGAACSRKGNEDGGKCF*GIPTHA
Trigger: GGCATGTGTGGGTATTCCCCAGAAGCATTTGCCTCC...GTCTTCATTCCCCTTTCTGGAACAGGCTGCTCCTTCTAGGATGTAATGGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp TATGAGGAAACTGAGGTCCCCAAAGGAGAAGTTGCCTGCTCAAGATCACTTGGTGGAGGCAAATGCTTCTaGGGAATACCCACACATGCC +
Preference number: 4 (lower is better)
Translates to: YEETEVPKGEVACSRSLGGGKCF*GIPTHA
Trigger: GGCATGTGTGGGTATTCCCCAGAAGCATTTGCCTCC...ACCAAGTGATCTTGAGCAGGCAACTTCTCCTTTGGGGACCTCAGTTTCCTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp TGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATAGGTGCAGCCTTGCGTaGCTCCATCATCACAGTCTT +
Preference number: 4 (lower is better)
Translates to: CLWQTQFSCFLVLHSAQYRCSLA*LHHHSL
Trigger: AAGACTGTGATGATGGAGCCACGCAAGGCTGCACCT...ATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp TTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTATCCATGTCACAGCCTaGCTGCCTACTGCCTTTCAA +
Preference number: 4 (lower is better)
Translates to: FLLPGPAFCPISCSSLPGIHVTA*LPTAFQ
Trigger: TTGAAAGGCAGTAGGCAGCCAGGCTGTGACATGGAT...ACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAGGAAGCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp TCCTCCCACACCATCCATGTCACAGCCTGGCTGCCTACTGCCTTTCAAAGGATAATATCTCATATTTGGTaGGTAGTGTGGACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SSHTIHVTAWLPTAFQRIISHIW*VVWTGA
Trigger: TGCTCCTGTCCACACTACTCACCAAATATGAGATAT...TATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGACATGGATGGTGTGGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp ATCATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCAGGCCATTATCCTCGGTaGAATAACTCAGAAACAAAG +
Preference number: 4 (lower is better)
Translates to: IIIVSQHTEVQPCVAPSSGHYPR*NNSETK
Trigger: CTTTGTTTCTGAGTTATTTCACCGAGGATAATGGCC...TGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp TGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATTTGGTCCACTTCTGCTaGATGGGGTTGTCGAGTTCA +
Preference number: 4 (lower is better)
Translates to: CLWQTQFSCFLVLHSAQYLVHFC*MGLSSS
Trigger: TGAACTCGACAACCCCATGCAGCAGAAGTGGACCAA...ATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp GTCACAGCCTGGCTGCCTACTGCCTTTCAAAGGATAACCAGTTGTCCAGTTTATTCAGCAGGAGGCAAATaGTTCTGGGGAATACCCACA +
Preference number: 4 (lower is better)
Translates to: VTAWLPTAFQRITSCPVYSAGGK*FWGIPT
Trigger: TGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGA...ATAAACTGGACAACTGGTTATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp TTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTACACCCCTTCTTCCCTaGAGGAACTTCTTAGCAGAT +
Preference number: 4 (lower is better)
Translates to: FLLPGPAFCPISCSSLPGTPLLP*RNFLAD
Trigger: ATCTGCTAAGAAGTTCCTGCAGGGAAGAAGGGGTGT...ACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAGGAAGCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp CCCCTTCTTCCCTGCAGGAACTTCTTAGCAGATCCACAATGTGTGTCATCTACCACACCCCTTCTTCCCTaGAGGAACTTCTTAGCAGAT +
Preference number: 4 (lower is better)
Translates to: PLLPCRNFLADPQCVSSTTPLLP*RNFLAD
Trigger: ATCTGCTAAGAAGTTCCTGCAGGGAAGAAGGGGTGT...GGTAGATGACACACATTGTGGATCTGCTAAGAAGTTCCTGCAGGGAAGAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp AGATCACTTGGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCACCCCAAAGGAGAAGTTaGCTGCTCAAGATCACTTGG +
Preference number: 4 (lower is better)
Translates to: RSLGLSVADSVFLLPGPAPQRRS*LLKITW
Trigger: CCAAGTGATCTTGAGCAGGCAACTTCTCCTTTGGGG...TGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAGTGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp CTCAGGGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCAGACTTCACCTCTATaGATGCAATATATGCATGTA +
Preference number: 4 (lower is better)
Translates to: LRDQAQQEANASGEYPHMQTSPL*MQYMHV
Trigger: TACATGCATATATTGCATGCATAGAGGTGAAGTCTG...CATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp GTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGTATTCCTCAAAGGCGATTTaGATGGAGCTCCCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: VLHSAQYPVAAYLVQVLYSSKAI*MELPFL
Trigger: CAGAAACGGGAGCTCCATCCAAATCGCCTTTGAGGA...ATACAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp AGATCACTTGGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCCAACTGTGTTGGTaGCAGTGTCAGAGTGACGTG +
Preference number: 4 (lower is better)
Translates to: RSLGLSVADSVFLLPGPAFQLCW*QCQSDV
Trigger: CACGTCACTCTGACACTGCCACCAACACAGTTGGAA...TGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAGTGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp TCCTCCCACACCATCCATGTCACAGCCTGGCTGCCTACTGCCTTTCAAAGGATATCAGTTCCTCAATTGTaGAGAGCTCCACTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: SSHTIHVTAWLPTAFQRISVPQL*RAPLVL
Trigger: AAGAACAAGTGGAGCTCTCCACAATTGAGGAACTGA...TATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGACATGGATGGTGTGGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp GTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGTATTCCACTTCTGCTGCATaGGGTTGTCGAGTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: VLHSAQYPVAAYLVQVLYSTSAA*GCRVQL
Trigger: TAGCTGAACTCGACAACCCCATGCAGCAGAAGTGGA...ATACAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR CAA 72 bp CCCAAAGGAGAAGTTGCCTGCTCAAGATCACTTGGTTaGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: PKGEVACSRSLG*SVADSVFLLPG
Trigger: ACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAGTGATCTTGAGCAGGCAACTTCTCCTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
3UTR CAA 72 bp AGGTCCCCAAAGGAGAAGTTGCCTGCTCAAGATCACTaGGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: RSPKEKLPAQDH*VCLWQTQFSCF
Trigger: GAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAGTGATCTTGAGCAGGCAACTTCTCCTTTGGGGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp GTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGTATCTACCCAAAGGCATGTaGCCTAAACACCCTGAGATA +
Preference number: 4 (lower is better)
Translates to: VLHSAQYPVAAYLVQVLYLPKGM*PKHPEI
Trigger: TATCTCAGGGTGTTTAGGGCACATGCCTTTGGGTAG...ATACAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp AGATCACTTGGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCAAAAAGAAGGGTCACCTaGGAGAGATGCCCTCTATCA +
Preference number: 4 (lower is better)
Translates to: RSLGLSVADSVFLLPGPAKRRVT*ERCPLS
Trigger: TGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTT...TGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAGTGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp GTCACAGCCTGGCTGCCTACTGCCTTTCAAAGGATAACCAGTTGTCCAGTTTATCTGCTCAAGATCACTTaGTTTGTCTGTGGCAGACTC +
Preference number: 4 (lower is better)
Translates to: VTAWLPTAFQRITSCPVYLLKIT*FVCGRL
Trigger: GAGTCTGCCACAGACAAACCAAGTGATCTTGAGCAG...ATAAACTGGACAACTGGTTATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp GATCTCCATTACATCCTAGAAGGAGCAGCCTGTTCCAGAAAGGGGAATGAAGACCTGCTCAAGATCACTTaGTTTGTCTGTGGCAGACTC +
Preference number: 4 (lower is better)
Translates to: DLHYILEGAACSRKGNEDLLKIT*FVCGRL
Trigger: GAGTCTGCCACAGACAAACCAAGTGATCTTGAGCAG...GTCTTCATTCCCCTTTCTGGAACAGGCTGCTCCTTCTAGGATGTAATGGAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR GCA 90 bp TCTTCCCTGCAGGAACTTCTTAGCAGATCCACAATGTGTGTCATCTACCCAACCCAGACTCAGTTTTCTTaGTTCCTGGTCCTGCATTCT +
Preference number: 4 (lower is better)
Translates to: SSLQELLSRSTMCVIYPTQTQFS*FLVLHS
Trigger: AGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTG...GGTTGGGTAGATGACACACATTGTGGATCTGCTAAGAAGTTCCTGCAGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp TTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAGTTCCTCAATTGTaGAGAGCTCCACTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: FLLPGPAFCPISCSSLPGSVPQL*RAPLVL
Trigger: AAGAACAAGTGGAGCTCTCCACAATTGAGGAACTGA...ACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAGGAAGCAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp TGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATTTCCAGAAAGGGGAATaGAGACTAACCTGTACTAGT +
Preference number: 4 (lower is better)
Translates to: CLWQTQFSCFLVLHSAQYFQKGE*RLTCTS
Trigger: ACTAGTACAGGTTAGTCTTCATTCCCCTTTCTGGAA...ATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR TCA 90 bp TCTTCCCTGCAGGAACTTCTTAGCAGATCCACAATGTGTGTCATCTACCCAACCGGCCATTATCCTCGGTaGAATAACTCAGAAACAAAG +
Preference number: 4 (lower is better)
Translates to: SSLQELLSRSTMCVIYPTGHYPR*NNSETK
Trigger: CTTTGTTTCTGAGTTATTTCACCGAGGATAATGGCC...GGTTGGGTAGATGACACACATTGTGGATCTGCTAAGAAGTTCCTGCAGGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CCA 90 bp GTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGTATAATATCATCCACAGATaGCCTCTCAGAAATATCCGA +
Preference number: 4 (lower is better)
Translates to: VLHSAQYPVAAYLVQVLYNIIHR*PLRNIR
Trigger: TCGGATATTTCTGAGAGGCCATCTGTGGATGATATT...ATACAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS CCA 90 bp CGCGGGCCCCGCCGGACCCTGGAGGGGACTGGTCTGCAGAGACGCTaGGGCTCGCGGGCCGGCACCGGCTCCGGGAGGGCTGCGTGCGCA +
Preference number: 5 (lower is better)
Translates to: RGPRRTLEGTGLQRR*GSRAGTGSGRAACA
Trigger: TGCGCACGCAGCCCTCCCGGAGCCGGTGCCGGCCCGCGAGCCCCAGCGTCTCTGCAGACCAGTCCCCTCCAGGGTCCGGCGGGGCCCGCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000528271.1
ENST00000529600.1
ENST00000648610.2
CDS GCA 90 bp GCAAGGCCGCCCAGCCCACGTCCCGCTGCCCCCAGCCCGGATCCATaGTCCGCGCGGGCTCCGATCCCGGTCCCGGCTGGGGCTCACCCG +
Preference number: 5 (lower is better)
Translates to: ARPPSPRPAAPSPDP*SARAPIPVPAGAHP
Trigger: CGGGTGAGCCCCAGCCGGGACCGGGATCGGAGCCCGCGCGGAGCATGGATCCGGGCTGGGGGCAGCGGGACGTGGGCTGGGCGGCCTTGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS CCA 90 bp CGCGGGCCCCGCCGGACCCTGGAGGGGACTGGTCTGCAGAGACGCTaGGGCTCGCGGGCCGGCACCGGCTCCGGGAGGGCTTGGCTTCCG +
Preference number: 5 (lower is better)
Translates to: RGPRRTLEGTGLQRR*GSRAGTGSGRAWLP
Trigger: CGGAAGCCAAGCCCTCCCGGAGCCGGTGCCGGCCCGCGAGCCCCAGCGTCTCTGCAGACCAGTCCCCTCCAGGGTCCGGCGGGGCCCGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534024.1
CDS GCA 90 bp GCAGAGACGCTGGGGCTCGCGGGCCGGCACCGGCTCCGGGAGGGCTaGGTGCGCAGAGCTGACACTGACAACACCGCCGGCGCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: AETLGLAGRHRLREG*VRRADTDNTAGAPP
Trigger: GGGCGGGGCGCCGGCGGTGTTGTCAGTGTCAGCTCTGCGCACGCAGCCCTCCCGGAGCCGGTGCCGGCCCGCGAGCCCCAGCGTCTCTGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528271.1
ENST00000529600.1
CDS CCA 90 bp CGCGGGCCCCGCCGGACCCTGGAGGGGACTGGTCTGCAGAGACGCTaGGGCTCGCGGGCCGGCACCGGCTCCGGGAGGGCTAAGATGCTG +
Preference number: 5 (lower is better)
Translates to: RGPRRTLEGTGLQRR*GSRAGTGSGRAKML
Trigger: CAGCATCTTAGCCCTCCCGGAGCCGGTGCCGGCCCGCGAGCCCCAGCGTCTCTGCAGACCAGTCCCCTCCAGGGTCCGGCGGGGCCCGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527854.1
CDS GCA 90 bp GAGGCGGCGAAGAGGATCAGCAAGGCCGCCCAGCCCACGTCCCGCTaGCCCCAGCCCGGATCCATGCTCCGCGCGGGCTCCGATCCCGGT +
Preference number: 5 (lower is better)
Translates to: EAAKRISKAAQPTSR*PQPGSMLRAGSDPG
Trigger: ACCGGGATCGGAGCCCGCGCGGAGCATGGATCCGGGCTGGGGGCAGCGGGACGTGGGCTGGGCGGCCTTGCTGATCCTCTTCGCCGCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS TCA 90 bp CCAGCCACAAGCCCCGGGCATATTGCAGCAGCCAGGCGAACACCGTaGGCAGCGAGGCGGCGAAGAGGATCAGCAAGGCCGCCCAGCCCA +
Preference number: 5 (lower is better)
Translates to: PATSPGHIAAARRTP*AARRRRGSARPPSP
Trigger: TGGGCTGGGCGGCCTTGCTGATCCTCTTCGCCGCCTCGCTGCTCACGGTGTTCGCCTGGCTGCTGCAATATGCCCGGGGCTTGTGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS CCA 90 bp GCGATGCCGGGGTCTCTGTCTCCGTGGTCCGGGTCTCTCCTAGCTTaGTCAGCAGTCGGACCCGTTAGTCGCCGGCCAGTGCCCGACTCC +
Preference number: 5 (lower is better)
Translates to: AMPGSLSPWSGSLLA*SAVGPVSRRPVPDS
Trigger: GGAGTCGGGCACTGGCCGGCGACTAACGGGTCCGACTGCTGACCAAGCTAGGAGAGACCCGGACCACGGAGACAGAGACCCCGGCATCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336702.7
ENST00000527854.1
ENST00000529600.1
ENST00000534024.1
ENST00000648610.2
CDS TCA 90 bp TCAGCGCTCGCACCCAAGCCCGCTGCCAGTTCTCCCGGAAAGACTTaGAGGCGAAGAGTGACGCCAGGAGGCCCCGGACTCCTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: SALAPKPAASSPGKT*RRRVTPGGPGLLAP
Trigger: AGGAGCCAGGAGTCCGGGGCCTCCTGGCGTCACTCTTCGCCTTCAAGTCTTTCCGGGAGAACTGGCAGCGGGCTTGGGTGCGAGCGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS GCA 90 bp GGCCACCCGCCCACTGGGCTCTGTCAGCTGGCGAATCGCTGTCTCTaGTACAGGGTCCAAGCCGTTGGAAAGGTGGCTGTCCCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: GHPPTGLCQLANRCL*YRVQAVGKVAVPWA
Trigger: AGCCCAGGGGACAGCCACCTTTCCAACGGCTTGGACCCTGTAGCAGAGACAGCGATTCGCCAGCTGACAGAGCCCAGTGGGCGGGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336702.7
CDS GCA 90 bp GGCCACCCGCCCACTGGGCTCTGTCAGCTGGCGAATCGCTGTCTCTaGTACAGGGTCCAAGCCGTTGGAAAGGTGGCTGTCCCGGCTGCT +
Preference number: 5 (lower is better)
Translates to: GHPPTGLCQLANRCL*YRVQAVGKVAVPAA
Trigger: AGCAGCCGGGACAGCCACCTTTCCAACGGCTTGGACCCTGTAGCAGAGACAGCGATTCGCCAGCTGACAGAGCCCAGTGGGCGGGTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528586.2
ENST00000529874.5
ENST00000648610.2
CDS CCA 90 bp GAGAGGAGGTCCTCGGGGGTCGCGATGCCGGGGTCTCTGTCTCCGTaGTCCGGGTCTCTCCTAGCTTGGTCAGCAGTCGGACCCGTTAGT +
Preference number: 5 (lower is better)
Translates to: ERRSSGVAMPGSLSP*SGSLLAWSAVGPVS
Trigger: ACTAACGGGTCCGACTGCTGACCAAGCTAGGAGAGACCCGGACCACGGAGACAGAGACCCCGGCATCGCGACCCCCGAGGACCTCCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336702.7
ENST00000527854.1
ENST00000529600.1
ENST00000534024.1
ENST00000648610.2
CDS-3UTR CAA 90 bp CTCATGTGCTTCCCGTTCCAAGTATCCTTCCAACCGGCCCCATGGCCCAGGGTGTCGGTCACCTCCACCTaGGACGGGGAGCGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: LMCFPFQVSFQPAPWPRVSVTST*DGEREG
Trigger: CCCCTCCCGCTCCCCGTCCAAGGTGGAGGTGACCGA...CACCCTGGGCCATGGGGCCGGTTGGAAGGATACTTGGAACGGGAAGCACATGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS TCA 90 bp GGCCTAGGAGTTCGGTGTCTCCACAGCTGCTGCTCCTCAGCACTTTaGGGGTCAGCTCCCGGCTCTGGGGGCCCAGATCCAGTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: GLGVRCLHSCCSSAL*GSAPGSGGPDPVPG
Trigger: ACCTGGCACTGGATCTGGGCCCCCAGAGCCGGGAGCTGACCCTCAAAGTGCTGAGGAGCAGCAGCTGTGGAGACACCGAACTCCTAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS TCA 90 bp CTCGGTCACCTCCACTGTCTCCACAGCTGCTGCTCCTCAGCACTTTaGGGGTCAGCTCCCGGCTCTGGGGGCCCAGATCCAGTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: LGHLHCLHSCCSSAL*GSAPGSGGPDPVPG
Trigger: ACCTGGCACTGGATCTGGGCCCCCAGAGCCGGGAGCTGACCCTCAAAGTGCTGAGGAGCAGCAGCTGTGGAGACAGTGGAGGTGACCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529874.5
CDS TCA 90 bp GGCCTAGGAGTTCGGTGTCTCCACAGCTGCTGCTCCTCAGCACTTTaGGGGTCAGCTCCCGGCTCTGGGGGCCCAGATCCCTGTGGGACA +
Preference number: 5 (lower is better)
Translates to: GLGVRCLHSCCSSAL*GSAPGSGGPDPCGT
Trigger: TGTCCCACAGGGATCTGGGCCCCCAGAGCCGGGAGCTGACCCTCAAAGTGCTGAGGAGCAGCAGCTGTGGAGACACCGAACTCCTAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS CCA 90 bp GGTCTCCATGGAGACGGCAGCGGGGGACTGCTGGGTCACAGAGACTaGGAACCGCACCTCCTCAGCAGAGAGCTGGCAACGCAGCACCAT +
Preference number: 5 (lower is better)
Translates to: GLHGDGSGGLLGHRD*EPHLLSRELATQHH
Trigger: ATGGTGCTGCGTTGCCAGCTCTCTGCTGAGGAGGTGCGGTTCCCAGTCTCTGTGACCCAGCAGTCCCCCGCTGCCGTCTCCATGGAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000529874.5
ENST00000648610.2
CDS-3UTR CAA 90 bp GACCTGAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGTTGGTGGGTGTCTTCTaGGCCACCCGCCCACTGGGC +
Preference number: 5 (lower is better)
Translates to: DLREVWEPHPKGNYPPSWLVGVF*ATRPLG
Trigger: GCCCAGTGGGCGGGTGGCCAAGAAGACACCCACCAA...CCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTCAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp TCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCACCGGGCTGGGGTTACCATaGGCCTTGGGTTTGGATTTG +
Preference number: 5 (lower is better)
Translates to: SPSQPPVPRPCPRHRVPTGLGLP*ALGLDL
Trigger: CAAATCCAAACCCAAGGCCAATGGTAACCCCAGCCC...GGTGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp CCTCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCAGGGCTGGGGTTACCATaGGCCTTGGGTTTGGATTTG +
Preference number: 5 (lower is better)
Translates to: PLPPSHQSLVHVLGTGCPGLGLP*ALGLDL
Trigger: CAAATCCAAACCCAAGGCCAATGGTAACCCCAGCCC...TGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS GCA 90 bp CCGTTTCTGCAGGCCTGCTCGTTCAGCGCTCGCACCCAAGCCCGCTaGCAGTTCTCCCGGAAAGACTTGAAGGCGAAGAGTGACGCCAGG +
Preference number: 5 (lower is better)
Translates to: PFLQACSFSARTQAR*QFSRKDLKAKSDAR
Trigger: CCTGGCGTCACTCTTCGCCTTCAAGTCTTTCCGGGAGAACTGGCAGCGGGCTTGGGTGCGAGCGCTGAACGAGCAGGCCTGCAGAAACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS GCA 90 bp TCTCTGCTCTGGAGCATGGGGTCGGGGCAGGGTTACTCCTTACAGTaGCAGGTCTTCTGTCCACTCCACCTCGGATCCAGCCCTCGCGGG +
Preference number: 5 (lower is better)
Translates to: SLLWSMGSGQGYSLQ*QVFCPLHLGSSPRG
Trigger: CCCGCGAGGGCTGGATCCGAGGTGGAGTGGACAGAAGACCTGGCACTGTAAGGAGTAACCCTGCCCCGACCCCATGCTCCAGAGCAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1
CDS-3UTR CAA 90 bp CTCAGGGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGTCGGTCACCTCCACCTaGGACGGGGAGCGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: LRDQAQQEANASGEYPHMSVTST*DGEREG
Trigger: CCCCTCCCGCTCCCCGTCCAAGGTGGAGGTGACCGA...CATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS GCA 90 bp GCTCCGGGAGGGCTTGGCTTCCGACTATGTTGGCAACAGGTTTCCTaGAAGAAACAGGCGCGTCTCCACACCCTCGTCCCTCCTCCCCAC +
Preference number: 5 (lower is better)
Translates to: APGGLGFRLCWQQVS*KKQARLHTLVPPPH
Trigger: GTGGGGAGGAGGGACGAGGGTGTGGAGACGCGCCTGTTTCTTGCAGGAAACCTGTTGCCAACATAGTCGGAAGCCAAGCCCTCCCGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534024.1
CDS-3UTR CAA 90 bp TCTCCCTCCCAGCCACCAGTCCCTCGTCCATGTCCTCGGCACCGGGTGCCCACCGGGATTTCCTCCAGGTaGACTTCCAACTGTGTTGGT +
Preference number: 5 (lower is better)
Translates to: SPSQPPVPRPCPRHRVPTGISSR*TSNCVG
Trigger: ACCAACACAGTTGGAAGTCAACCTGGAGGAAATCCC...GGTGGGCACCCGGTGCCGAGGACATGGACGAGGGACTGGTGGCTGGGAGGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp GAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGGAGCAAGCCCTGAGGTaGACCATCATGGCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: EGGVGAPSQRELPTLLGQEQALR*TIMAGW
Trigger: CCAGCCAGCCATGATGGTCAACCTCAGGGCTTGCTC...CTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp GGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCCGGACCAGCCCTCGCGGGCTaGGTCCACTTCTGCTGCATG +
Preference number: 5 (lower is better)
Translates to: GPGSAGGKCFWGIPTHAGPALAG*VHFCCM
Trigger: CATGCAGCAGAAGTGGACCAAGCCCGCGAGGGCTGG...TCCGGCATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp ATAAGGGAAGAAGGGTCAGCTGAAGAGCTGAGCACCCTGGGACTCCGCTCAGGGCCAGCCCTCGCGGGCTaGGTCCACTTCTGCTGCATG +
Preference number: 5 (lower is better)
Translates to: IREEGSAEELSTLGLRSGPALAG*VHFCCM
Trigger: CATGCAGCAGAAGTGGACCAAGCCCGCGAGGGCTGG...CCCTGAGCGGAGTCCCAGGGTGCTCAGCTCTTCAGCTGACCCTTCTTCCCTTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp ACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGTTGGTGGGTGTCTTCTaGGCCACCCGCCCACTGGGC +
Preference number: 5 (lower is better)
Translates to: TFSEADTGAGLSGDLREVLVGVF*ATRPLG
Trigger: GCCCAGTGGGCGGGTGGCCAAGAAGACACCCACCAA...CACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp GAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGGGCGTGGCCGTTGCGTaGGAGAGGTCATCGTGTGAT +
Preference number: 5 (lower is better)
Translates to: EGGVGAPSQRELPTLLGQGVAVA*ERSSCD
Trigger: ATCACACGATGACCTCTCCAACGCAACGGCCACGCC...CTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp CTTGATAAGGCGGCGAGAAAAGCTGCCGGCCTTCTTTCGGACACTGGGCGTGGCACAGGGTCCAAGCCGTaGGAAAGGTGGCTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: LDKAARKAAGLLSDTGRGTGSKP*ERWLSR
Trigger: CCGGGACAGCCACCTTTCCAACGGCTTGGACCCTGT...GCCACGCCCAGTGTCCGAAAGAAGGCCGGCAGCTTTTCTCGCCGCCTTATCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS TCA 90 bp CGAAGCTGCCGTAGGAATAACCGGTTAGGTCTGGGGATGGCTGGCTaGGCCTGGGGCATCATGGGTGGCTTCTCACTGGGTACCAGGCCT +
Preference number: 5 (lower is better)
Translates to: RSCRRNNRLGLGMAG*AWGIMGGFSLGTRP
Trigger: AGGCCTGGTACCCAGTGAGAAGCCACCCATGATGCCCCAGGCTCAGCCAGCCATCCCCAGACCTAACCGGTTATTCCTACGGCAGCTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000529874.5
ENST00000648610.2
CDS GCA 90 bp CACTCCACCTCGGATCCAGCCCTCGCGGGCTTGGTCCACTTCTGCTaGATGGGGTTGTCGAGTTCAGCTACACAGCACAGTTCCTCGGTG +
Preference number: 5 (lower is better)
Translates to: HSTSDPALAGLVHFC*MGLSSSATQHSSSV
Trigger: CACCGAGGAACTGTGCTGTGTAGCTGAACTCGACAACCCCATGCAGCAGAAGTGGACCAAGCCCGCGAGGGCTGGATCCGAGGTGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000529874.5
ENST00000648610.2
CDS GCA 90 bp GTCCACTCCACCTCGGATCCAGCCCTCGCGGGCTTGGTCCACTTCTaGTGCATGGGGTTGTCGAGTTCAGCTACACAGCACAGTTCCTCG +
Preference number: 5 (lower is better)
Translates to: VHSTSDPALAGLVHF*CMGLSSSATQHSSS
Trigger: CGAGGAACTGTGCTGTGTAGCTGAACTCGACAACCCCATGCAGCAGAAGTGGACCAAGCCCGCGAGGGCTGGATCCGAGGTGGAGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000529874.5
ENST00000648610.2
CDS GCA 90 bp GGCTGTCCCCTGGGCTGCTGCTATGGGAGGTATTGCTGGGGCCACTaGTCTCACTCAGCACAGTTGTCGTCTTCTCGGTCACCTCCACCT +
Preference number: 5 (lower is better)
Translates to: GCPLGCCYGRYCWGH*SHSAQLSSSRSPPP
Trigger: AGGTGGAGGTGACCGAGAAGACGACAACTGTGCTGAGTGAGAGCAGTGGCCCCAGCAATACCTCCCATAGCAGCAGCCCAGGGGACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336702.7
CDS GCA 90 bp GGTGGCTGTCCCGGCTGCTGCTATGGGAGGTATTGCTGGGGCCACTaGTCTCACTCAGCACAGTTGTCGTCTTCTCGGTCACCTCCACTG +
Preference number: 5 (lower is better)
Translates to: GGCPGCCYGRYCWGH*SHSAQLSSSRSPPL
Trigger: CAGTGGAGGTGACCGAGAAGACGACAACTGTGCTGAGTGAGAGCAGTGGCCCCAGCAATACCTCCCATAGCAGCAGCCGGGACAGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529874.5
CDS GCA 90 bp GGTGGCTGTCCCGGCTGCTGCTATGGGAGGTATTGCTGGGGCCACTaGTCTCACTCAGCACAGTTGTCGTCTTCTCGGTCACCTCCACCT +
Preference number: 5 (lower is better)
Translates to: GGCPGCCYGRYCWGH*SHSAQLSSSRSPPP
Trigger: AGGTGGAGGTGACCGAGAAGACGACAACTGTGCTGAGTGAGAGCAGTGGCCCCAGCAATACCTCCCATAGCAGCAGCCGGGACAGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528586.2
ENST00000648610.2
CDS CCA 90 bp CCACCTCGGATCCAGCCCTCGCGGGCTTGGTCCACTTCTGCTGCATaGGGTTGTCGAGTTCAGCTACACAGCACAGTTCCTCGGTGCCTT +
Preference number: 5 (lower is better)
Translates to: PPRIQPSRAWSTSAA*GCRVQLHSTVPRCL
Trigger: AAGGCACCGAGGAACTGTGCTGTGTAGCTGAACTCGACAACCCCATGCAGCAGAAGTGGACCAAGCCCGCGAGGGCTGGATCCGAGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000529874.5
ENST00000648610.2
CDS CCA 90 bp CCAGGTCTTCTGTCCACTCCACCTCGGATCCAGCCCTCGCGGGCTTaGTCCACTTCTGCTGCATGGGGTTGTCGAGTTCAGCTACACAGC +
Preference number: 5 (lower is better)
Translates to: PGLLSTPPRIQPSRA*STSAAWGCRVQLHS
Trigger: GCTGTGTAGCTGAACTCGACAACCCCATGCAGCAGAAGTGGACCAAGCCCGCGAGGGCTGGATCCGAGGTGGAGTGGACAGAAGACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000529874.5
ENST00000648610.2
CDS CCA 90 bp TTGGTGGGTGTCTTCTTGGCCACCCGCCCACTGGGCTCTGTCAGCTaGCGAATCGCTGTCTCTGCTACAGGGTCCAAGCCGTTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: LVGVFLATRPLGSVS*RIAVSATGSKPLER
Trigger: CCTTTCCAACGGCTTGGACCCTGTAGCAGAGACAGCGATTCGCCAGCTGACAGAGCCCAGTGGGCGGGTGGCCAAGAAGACACCCACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000529874.5
ENST00000648610.2
CDS-3UTR CAA 90 bp CATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCCCAGCCCTCGCGGGCTaGGTCCACTTCTGCTGCATG +
Preference number: 5 (lower is better)
Translates to: HRLPTHRGAALRGSIITVPALAG*VHFCCM
Trigger: CATGCAGCAGAAGTGGACCAAGCCCGCGAGGGCTGG...GACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp GAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGATGAGAGTGCTGCGCTaGGTGGGTGTCTTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: EGGVGAPSQRELPTLLGQMRVLR*VGVFLA
Trigger: GGCCAAGAAGACACCCACCAAGCGCAGCACTCTCAT...CTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp ACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGACAGGGTCCAAGCCGTaGGAAAGGTGGCTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: TFSEADTGAGLSGDLREVTGSKP*ERWLSR
Trigger: CCGGGACAGCCACCTTTCCAACGGCTTGGACCCTGT...CACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528586.2
ENST00000648610.2
CDS TCA 90 bp AGTTTCCCACATCCCCTTCTACCTGTGTTGGTGGCAGTGTCAGAGTaGCGTGGTAGGTCTCCATGGAGACGGCAGCGGGGGACTGCTGGG +
Preference number: 5 (lower is better)
Translates to: SFPHPLLPVLVAVSE*RGRSPWRRQRGTAG
Trigger: CCCAGCAGTCCCCCGCTGCCGTCTCCATGGAGACCTACCACGTCACTCTGACACTGCCACCAACACAGGTAGAAGGGGATGTGGGAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS GCA 90 bp CGTTGGAAAGGTGGCTGTCCCCTGGGCTGCTGCTATGGGAGGTATTaGTGGGGCCACTGCTCTCACTCAGCACAGTTGTCGTCTTCTCGG +
Preference number: 5 (lower is better)
Translates to: RWKGGCPLGCCYGRY*WGHCSHSAQLSSSR
Trigger: CCGAGAAGACGACAACTGTGCTGAGTGAGAGCAGTGGCCCCAGCAATACCTCCCATAGCAGCAGCCCAGGGGACAGCCACCTTTCCAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336702.7
CDS CCA 90 bp GAGCGGGAGGGGGAGTCTAATTTGCCGTCTATACGGGGCCGGGACTaGACAGTGGTGACTGTGGTGACAATGGTGCCATCGGGCATGATG +
Preference number: 5 (lower is better)
Translates to: EREGESNLPSIRGRD*TVVTVVTMVPSGMM
Trigger: CATCATGCCCGATGGCACCATTGTCACCACAGTCACCACTGTCCAGTCCCGGCCCCGTATAGACGGCAAATTAGACTCCCCCTCCCGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS CCA 90 bp CCGCCCCTGCCCAACTCAGTTTCCCACATCCCCTTCTACCTGTGTTaGTGGCAGTGTCAGAGTGACGTGGTAGGTCTCCATGGAGACGGC +
Preference number: 5 (lower is better)
Translates to: PPLPNSVSHIPFYLC*WQCQSDVVGLHGDG
Trigger: GCCGTCTCCATGGAGACCTACCACGTCACTCTGACACTGCCACCAACACAGGTAGAAGGGGATGTGGGAAACTGAGTTGGGCAGGGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS-3UTR CAA 90 bp GGCGAGAAAAGCTGCCGGCCTTCTTTCGGACACTGGGCGTGGCCGTTGCGTTGGTCTCACTCAGCACAGTaGTCGTCTTCTCGGTCACCT +
Preference number: 5 (lower is better)
Translates to: GEKSCRPSFGHWAWPLRWSHSAQ*SSSRSP
Trigger: AGGTGACCGAGAAGACGACAACTGTGCTGAGTGAGA...CCAACGCAACGGCCACGCCCAGTGTCCGAAAGAAGGCCGGCAGCTTTTCTCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR CAA 90 bp CTCTGTGAGCTGCCAACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGCACTGGGCGTGGCCGTaGCGTTGGAGAGGTCATCGT +
Preference number: 5 (lower is better)
Translates to: LCELPTFSEADTGAGLSGHWAWP*RWRGHR
Trigger: ACGATGACCTCTCCAACGCAACGGCCACGCCCAGTG...CCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGTTGGCAGCTCACAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp TTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGTGGCACAGAGGTGCAGCCTaGCGTGGCTCCATCATCACA +
Preference number: 5 (lower is better)
Translates to: FSEADTGAGLSGDLREVWHRGAA*RGSIIT
Trigger: TGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTG...CCACACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS GCA 90 bp TTCCCCACTCACGGCTGCTGCTATGGGAGGTATTGCTGGGGCCACTaGTCTCACTCAGCACAGTTGTCGTCTTCTCGGTCACCTCCACCT +
Preference number: 5 (lower is better)
Translates to: FPTHGCCYGRYCWGH*SHSAQLSSSRSPPP
Trigger: AGGTGGAGGTGACCGAGAAGACGACAACTGTGCTGAGTGAGAGCAGTGGCCCCAGCAATACCTCCCATAGCAGCAGCCGTGAGTGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS CCA 90 bp TGCTCTCACTCAGCACAGTTGTCGTCTTCTCGGTCACCTCCACCTTaGACGGGGAGCGGGAGGGGGAGTCTAATTTGCCGTCTATACGGG +
Preference number: 5 (lower is better)
Translates to: CSHSAQLSSSRSPPP*TGSGRGSLICRLYG
Trigger: CCCGTATAGACGGCAAATTAGACTCCCCCTCCCGCTCCCCGTCCAAGGTGGAGGTGACCGAGAAGACGACAACTGTGCTGAGTGAGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS CCA 90 bp CCCCTGCCCAACTCAGTTTCCCACATCCCCTTCTACCTGTGTTGGTaGCAGTGTCAGAGTGACGTGGTAGGTCTCCATGGAGACGGCAGC +
Preference number: 5 (lower is better)
Translates to: PLPNSVSHIPFYLCW*QCQSDVVGLHGDGS
Trigger: GCTGCCGTCTCCATGGAGACCTACCACGTCACTCTGACACTGCCACCAACACAGGTAGAAGGGGATGTGGGAAACTGAGTTGGGCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS CCA 90 bp TCTCCTCTTTCACTGTCCTGCCTTGGGTCTGCAGTCCCGGGCCCCTaGCTAGAGCTGGGCTCCCAGGCTCCTTCTCTTTACCTAATTTGC +
Preference number: 5 (lower is better)
Translates to: SPLSLSCLGSAVPGP*LELGSQAPSLYLIC
Trigger: GCAAATTAGGTAAAGAGAAGGAGCCTGGGAGCCCAGCTCTAGCCAGGGGCCCGGGACTGCAGACCCAAGGCAGGACAGTGAAAGAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1
CDS-3UTR CAA 90 bp ATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGCAAGCCCCGGGCATATaGCAGCAGCCAGGCGAACAC +
Preference number: 5 (lower is better)
Translates to: IIVSQHTEVQPCVAPSSQQAPGI*QQPGEH
Trigger: GTGTTCGCCTGGCTGCTGCAATATGCCCGGGGCTTG...CTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp ATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGCTGCTCCTCAGCACTTaGAGGGTCAGCTCCCGGCTC +
Preference number: 5 (lower is better)
Translates to: IIVSQHTEVQPCVAPSSQLLLST*RVSSRL
Trigger: GAGCCGGGAGCTGACCCTCAAAGTGCTGAGGAGCAG...CTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp CATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCGAGGGGGAGTCTAATTaGCCGTCTATACGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: HRLPTHRGAALRGSIITVEGESN*PSIRGR
Trigger: CCGGCCCCGTATAGACGGCAAATTAGACTCCCCCTC...GACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp CTCAGGGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGGAGGGGGAGTCTAATTaGCCGTCTATACGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: LRDQAQQEANASGEYPHMEGESN*PSIRGR
Trigger: CCGGCCCCGTATAGACGGCAAATTAGACTCCCCCTC...CATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp GAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGTCTCACTCAGCACAGTaGTCGTCTTCTCGGTCACCT +
Preference number: 5 (lower is better)
Translates to: EGGVGAPSQRELPTLLGQSHSAQ*SSSRSP
Trigger: AGGTGACCGAGAAGACGACAACTGTGCTGAGTGAGA...CTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS GCA 90 bp GAAATGCCACAGAGGCCTCTGGGTTTGTTGGAGGACCCCAGGGGGTaGTGGAGGGCTGAGGGTAGCAGGATGGACAATTATAGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: EMPQRPLGLLEDPRG*WRAEGSRMDNYSQL
Trigger: CAGCTGACTATAATTGTCCATCCTGCTACCCTCAGCCCTCCAGCACCCCCTGGGGTCCTCCAACAAACCCAGAGGCCTCTGTGGCATTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1
CDS CCA 90 bp CAGCCCCTCACCAGGGATTTCCTCCAGGTTGACTTCCAACTGTGTTaGTGGCAGTGTCAGAGTGACGTGGTAGGTCTCCATGGAGACGGC +
Preference number: 5 (lower is better)
Translates to: QPLTRDFLQVDFQLC*WQCQSDVVGLHGDG
Trigger: GCCGTCTCCATGGAGACCTACCACGTCACTCTGACACTGCCACCAACACAGTTGGAAGTCAACCTGGAGGAAATCCCTGGTGAGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000529874.5
ENST00000648610.2
CDS-3UTR CAA 90 bp ATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGGAGCAAGCCCTGAGGTaGACCATCATGGCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: IIVSQHTEVQPCVAPSSQEQALR*TIMAGW
Trigger: CCAGCCAGCCATGATGGTCAACCTCAGGGCTTGCTC...CTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp TTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGTGGTTCTGCTGCATGGGGTaGTCGAGTTCAGCTACACAG +
Preference number: 5 (lower is better)
Translates to: FSEADTGAGLSGDLREVWFCCMG*SSSATQ
Trigger: CTGTGTAGCTGAACTCGACAACCCCATGCAGCAGAA...CCACACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp GTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGTATTCGGTCACCTCCACCTaGGACGGGGAGCGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: VLHSAQYPVAAYLVQVLYSVTST*DGEREG
Trigger: CCCCTCCCGCTCCCCGTCCAAGGTGGAGGTGACCGA...ATACAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp ATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGGGCGTGGCCGTTGCGTaGGAGAGGTCATCGTGTGAT +
Preference number: 5 (lower is better)
Translates to: IIVSQHTEVQPCVAPSSQGVAVA*ERSSCD
Trigger: ATCACACGATGACCTCTCCAACGCAACGGCCACGCC...CTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp CATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCCACAGAGGTGCAGCCTaGCGTGGCTCCATCATCACA +
Preference number: 5 (lower is better)
Translates to: HRLPTHRGAALRGSIITVHRGAA*RGSIIT
Trigger: TGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTG...GACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS CCA 90 bp CCTCCTGGGGCAGAGCAAGCCCTGAGGTTGACCATCATGGCTGGCTaGGTGCTGACTATGGCATCCTTGATCAGTTCCTCAATTGTGGAG +
Preference number: 5 (lower is better)
Translates to: PPGAEQALRLTIMAG*VLTMASLISSSIVE
Trigger: CTCCACAATTGAGGAACTGATCAAGGATGCCATAGTCAGCACCCAGCCAGCCATGATGGTCAACCTCAGGGCTTGCTCTGCCCCAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000529874.5
ENST00000648610.2
CDS CCA 90 bp CAGGCCTCCTGGGGCAGAGCAAGCCCTGAGGTTGACCATCATGGCTaGCTGGGTGCTGACTATGGCATCCTTGATCAGTTCCTCAATTGT +
Preference number: 5 (lower is better)
Translates to: QASWGRASPEVDHHG*LGADYGILDQFLNC
Trigger: ACAATTGAGGAACTGATCAAGGATGCCATAGTCAGCACCCAGCCAGCCATGATGGTCAACCTCAGGGCTTGCTCTGCCCCAGGAGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000529874.5
ENST00000648610.2
CDS-3UTR CAA 90 bp ACAGAAAAGAAGGGTCACCTGGGAGAGATGCCCTCTATCATCTGTTCACGGAGGCGGGTCTCTCCTAGCTaGGTCAGCAGTCGGACCCGT +
Preference number: 5 (lower is better)
Translates to: TEKKGHLGEMPSIICSRRRVSPS*VSSRTR
Trigger: ACGGGTCCGACTGCTGACCAAGCTAGGAGAGACCCG...CCTCCGTGAACAGATGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp ACAGAAAAGAAGGGTCACCTGGGAGAGATGCCCTCTATCATCTGTTCACGGAGGCAAGCCCCGGGCATATaGCAGCAGCCAGGCGAACAC +
Preference number: 5 (lower is better)
Translates to: TEKKGHLGEMPSIICSRRQAPGI*QQPGEH
Trigger: GTGTTCGCCTGGCTGCTGCAATATGCCCGGGGCTTG...CCTCCGTGAACAGATGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp ACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGTGTGGAGAGCTCCACTaGTTCTTCACCTCTCTCCCT +
Preference number: 5 (lower is better)
Translates to: TFSEADTGAGLSGDLREVCGELH*FFTSLP
Trigger: AGGGAGAGAGGTGAAGAACAAGTGGAGCTCTCCACA...CACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp ACATTCTCAGAGGCAGACACTGGTGCTGGTCTGAGTGGGGACCTGAGGGAGGTGTTCTGCTGCATGGGGTaGTCGAGTTCAGCTACACAG +
Preference number: 5 (lower is better)
Translates to: TFSEADTGAGLSGDLREVFCCMG*SSSATQ
Trigger: CTGTGTAGCTGAACTCGACAACCCCATGCAGCAGAA...CACCTCCCTCAGGTCCCCACTCAGACCAGCACCAGTGTCTGCCTCTGAGAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp ATCATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCAGAGGGGGAGTCTAATTaGCCGTCTATACGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: IIIVSQHTEVQPCVAPSSEGESN*PSIRGR
Trigger: CCGGCCCCGTATAGACGGCAAATTAGACTCCCCCTC...TGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp ACAGAAAAGAAGGGTCACCTGGGAGAGATGCCCTCTATCATCTGTTCACGGAGGCACTGGGCGTGGCCGTaGCGTTGGAGAGGTCATCGT +
Preference number: 5 (lower is better)
Translates to: TEKKGHLGEMPSIICSRRHWAWP*RWRGHR
Trigger: ACGATGACCTCTCCAACGCAACGGCCACGCCCAGTG...CCTCCGTGAACAGATGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp GAGGGAGGTGTGGGAGCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGCCGGATATCTCATATTaGGTGAGTAGTGTGGACAGG +
Preference number: 5 (lower is better)
Translates to: EGGVGAPSQRELPTLLGQPDISY*VSSVDR
Trigger: CCTGTCCACACTACTCACCAAATATGAGATATCCGG...CTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGCTCCCACACCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS CCA 90 bp GATGGCCTCTCAGAAATATCCGAACGGGTTGTCTCGTCTGCTTCCTaGACACTTGTGGGACTAGAGAGGGCATCTAGCGGTCCTGGAGAC +
Preference number: 5 (lower is better)
Translates to: DGLSEISERVVSSAS*TLVGLERASSGPGD
Trigger: GTCTCCAGGACCGCTAGATGCCCTCTCTAGTCCCACAAGTGTCCAGGAAGCAGACGAGACAACCCGTTCGGATATTTCTGAGAGGCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000648610.2
CDS CCA 90 bp GGCTCCTTCTCTTTACCTAATTTGCCGTCTATACGGGGCCGGGACTaGACAGTGGTGACTGTGGTGACAATGGTGCCATCGGGCATGATG +
Preference number: 5 (lower is better)
Translates to: GSFSLPNLPSIRGRD*TVVTVVTMVPSGMM
Trigger: CATCATGCCCGATGGCACCATTGTCACCACAGTCACCACTGTCCAGTCCCGGCCCCGTATAGACGGCAAATTAGGTAAAGAGAAGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1
CDS-3UTR CAA 90 bp GCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGAAAAGAAGGGTCACCCTCCTCAAAGGCGATTaGGATGGAGCTCCCGTTTCT +
Preference number: 5 (lower is better)
Translates to: APSQRELPTLLGQKRRVTLLKGD*DGAPVS
Trigger: AGAAACGGGAGCTCCATCCAAATCGCCTTTGAGGAG...GGTGACCCTTCTTTTCTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp CTCAGGGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCTCCTCAAAGGCGATTaGGATGGAGCTCCCGTTTCT +
Preference number: 5 (lower is better)
Translates to: LRDQAQQEANASGEYPHMLLKGD*DGAPVS
Trigger: AGAAACGGGAGCTCCATCCAAATCGCCTTTGAGGAG...CATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp GGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCCGGAGGGATTTCCTCCAGGTaGACTTCCAACTGTGTTGGT +
Preference number: 5 (lower is better)
Translates to: GPGSAGGKCFWGIPTHAGGISSR*TSNCVG
Trigger: ACCAACACAGTTGGAAGTCAACCTGGAGGAAATCCC...TCCGGCATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp CATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCTGTGGAGAGCTCCACTaGTTCTTCACCTCTCTCCCT +
Preference number: 5 (lower is better)
Translates to: HRLPTHRGAALRGSIITVCGELH*FFTSLP
Trigger: AGGGAGAGAGGTGAAGAACAAGTGGAGCTCTCCACA...GACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp ACCATTGGCCTTGGGTTTGGATTTGAAGGAAAAGCGCTTGATAAGGCGGCGAGACTGCTCCTCAGCACTTaGAGGGTCAGCTCCCGGCTC +
Preference number: 5 (lower is better)
Translates to: TIGLGFGFEGKALDKAARLLLST*RVSSRL
Trigger: GAGCCGGGAGCTGACCCTCAAAGTGCTGAGGAGCAG...TCTCGCCGCCTTATCAAGCGCTTTTCCTTCAAATCCAAACCCAAGGCCAATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR CAA 90 bp TTTCGGACACTGGGCGTGGCCGTTGCGTTGGAGAGGTCATCGTGTGATTGGCTCAAATATCCGAACGGGTaGTCTCGTCTGCTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: FRTLGVAVALERSSCDWLKYPNG*SRLLPG
Trigger: TCCAGGAAGCAGACGAGACAACCCGTTCGGATATTT...GAGCCAATCACACGATGACCTCTCCAACGCAACGGCCACGCCCAGTGTCCGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR CAA 90 bp GGAGGTGGGGAATGGGCTGAGAGAACTCGTGCCCTTTCAGAGCTGGGTCCTCAGTTGAAGGAAAAGCGCTaGATAAGGCGGCGAGAAAAG +
Preference number: 5 (lower is better)
Translates to: GGGEWAERTRALSELGPQLKEKR*IRRREK
Trigger: CTTTTCTCGCCGCCTTATCAAGCGCTTTTCCTTCAA...CTGAGGACCCAGCTCTGAAAGGGCACGAGTTCTCTCAGCCCATTCCCCACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR CAA 90 bp GTGGGGAATGGGCTGAGAGAACTCGTGCCCTTTCAGAGCTGGGTCCTCAGAGCTCCATTGGCCTTGGGTTaGGATTTGAAGGAAAAGCGC +
Preference number: 5 (lower is better)
Translates to: VGNGLRELVPFQSWVLRAPLALG*DLKEKR
Trigger: GCGCTTTTCCTTCAAATCCAAACCCAAGGCCAATGG...AGCTCTGAGGACCCAGCTCTGAAAGGGCACGAGTTCTCTCAGCCCATTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR CAA 90 bp ATCATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACACAGAGGTGCAGCCTaGCGTGGCTCCATCATCACA +
Preference number: 5 (lower is better)
Translates to: IIIVSQHTEVQPCVAPSSHRGAA*RGSIIT
Trigger: TGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTG...TGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS CCA 90 bp CAGGGCACCAGTGGACCCCGTTTCCGACTCAATATCATCCACAGATaGCCTCTCAGAAATATCCGAACGGGTTGTCTCGTCTGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: QGTSGPRFRLNIIHR*PLRNIRTGCLVCFL
Trigger: CAGGAAGCAGACGAGACAACCCGTTCGGATATTTCTGAGAGGCCATCTGTGGATGATATTGAGTCGGAAACGGGGTCCACTGGTGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp GTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGTATCGGGTCTCTCCTAGCTaGGTCAGCAGTCGGACCCGT +
Preference number: 5 (lower is better)
Translates to: VLHSAQYPVAAYLVQVLYRVSPS*VSSRTR
Trigger: ACGGGTCCGACTGCTGACCAAGCTAGGAGAGACCCG...ATACAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp GTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGTATCTGCTCCTCAGCACTTaGAGGGTCAGCTCCCGGCTC +
Preference number: 5 (lower is better)
Translates to: VLHSAQYPVAAYLVQVLYLLLST*RVSSRL
Trigger: GAGCCGGGAGCTGACCCTCAAAGTGCTGAGGAGCAG...ATACAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp TTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTGGCGTGGCCGTTGCGTaGGAGAGGTCATCGTGTGAT +
Preference number: 5 (lower is better)
Translates to: FLLPGPAFCPISCSSLPGGVAVA*ERSSCD
Trigger: ATCACACGATGACCTCTCCAACGCAACGGCCACGCC...ACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAGGAAGCAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp GTCACAGCCTGGCTGCCTACTGCCTTTCAAAGGATAACCAGTTGTCCAGTTTATCACTGGGCGTGGCCGTaGCGTTGGAGAGGTCATCGT +
Preference number: 5 (lower is better)
Translates to: VTAWLPTAFQRITSCPVYHWAWP*RWRGHR
Trigger: ACGATGACCTCTCCAACGCAACGGCCACGCCCAGTG...ATAAACTGGACAACTGGTTATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS GCA 90 bp TCTCTCTCGTCCCAAGAGAAAGGGACAGGGCCTGAGTGGAAACCATaGTTCTCAGCTATGCATTCAAATCCTCCCTGGTCCTGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: SLSSQEKGTGPEWKP*FSAMHSNPPWSCSS
Trigger: GGAAGAGCAGGACCAGGGAGGATTTGAATGCATAGCTGAGAAGCATGGTTTCCACTCAGGCCCTGTCCCTTTCTCTTGGGACGAGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1
CDS CCA 90 bp TTATGTACACCTGTCTCTGCCTCAAGCTTGTCATTGACCCAGGGGTaGGGGCTGTATCTTGGTCAAGTCTGTATCCCTAAGACCCACGCC +
Preference number: 5 (lower is better)
Translates to: LCTPVSASSLSLTQG*GLYLGQVCIPKTHA
Trigger: GGCGTGGGTCTTAGGGATACAGACTTGACCAAGATACAGCCCCCACCCCTGGGTCAATGACAAGCTTGAGGCAGAGACAGGTGTACATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1
CDS-3UTR CAA 90 bp GTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGTATGAGCAAGCCCTGAGGTaGACCATCATGGCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: VLHSAQYPVAAYLVQVLYEQALR*TIMAGW
Trigger: CCAGCCAGCCATGATGGTCAACCTCAGGGCTTGCTC...ATACAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp ACCATTGGCCTTGGGTTTGGATTTGAAGGAAAAGCGCTTGATAAGGCGGCGAGACTGCTATGGGAGGTATaGCTGGGGCCACTGCTCTCA +
Preference number: 5 (lower is better)
Translates to: TIGLGFGFEGKALDKAARLLWEV*LGPLLS
Trigger: TGAGAGCAGTGGCCCCAGCAATACCTCCCATAGCAG...TCTCGCCGCCTTATCAAGCGCTTTTCCTTCAAATCCAAACCCAAGGCCAATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528586.2
CDS-3UTR CAA 90 bp CCCCTTCTTCCCTGCAGGAACTTCTTAGCAGATCCACAATGTGTGTCATCTACCCTGCTATGGGAGGTATaGCTGGGGCCACTGCTCTCA +
Preference number: 5 (lower is better)
Translates to: PLLPCRNFLADPQCVSSTLLWEV*LGPLLS
Trigger: TGAGAGCAGTGGCCCCAGCAATACCTCCCATAGCAG...GGTAGATGACACACATTGTGGATCTGCTAAGAAGTTCCTGCAGGGAAGAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp TGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATACAGGGTCCAAGCCGTaGGAAAGGTGGCTGTCCCCT +
Preference number: 5 (lower is better)
Translates to: CLWQTQFSCFLVLHSAQYTGSKP*ERWLSP
Trigger: AGGGGACAGCCACCTTTCCAACGGCTTGGACCCTGT...ATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336702.7
CDS-3UTR CAA 90 bp ATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGCCATTGGCCTTGGGTTaGGATTTGAAGGAAAAGCGC +
Preference number: 5 (lower is better)
Translates to: IIVSQHTEVQPCVAPSSQPLALG*DLKEKR
Trigger: GCGCTTTTCCTTCAAATCCAAACCCAAGGCCAATGG...CTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp CTCAGGGACCAGGCTCAGCAGGAGGCAAATGCTTCTGGGGAATACCCACACATGCCGGATATCTCATATTaGGTGAGTAGTGTGGACAGG +
Preference number: 5 (lower is better)
Translates to: LRDQAQQEANASGEYPHMPDISY*VSSVDR
Trigger: CCTGTCCACACTACTCACCAAATATGAGATATCCGG...CATGTGTGGGTATTCCCCAGAAGCATTTGCCTCCTGCTGAGCCTGGTCCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS CCA 90 bp TGTCCCCTGCTAGGGGTGCAGAGAATGAATAACCTGACTTCTCCCTaGCTCTTTCTTGGATTGGAACTCCTCCTATCCCACCCAGAGTAC +
Preference number: 5 (lower is better)
Translates to: CPLLGVQRMNNLTSP*LFLGLELLLSHPEY
Trigger: GTACTCTGGGTGGGATAGGAGGAGTTCCAATCCAAGAAAGAGCCAGGGAGAAGTCAGGTTATTCATTCTCTGCACCCCTAGCAGGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS-3UTR CAA 90 bp CATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGTCCTGACTATGGCATCCTaGATCAGTTCCTCAATTGTG +
Preference number: 5 (lower is better)
Translates to: HRLPTHRGAALRGSIITVLTMAS*ISSSIV
Trigger: CACAATTGAGGAACTGATCAAGGATGCCATAGTCAG...GACTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp TGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATCTGCTATGGGAGGTATaGCTGGGGCCACTGCTCTCA +
Preference number: 5 (lower is better)
Translates to: CLWQTQFSCFLVLHSAQYLLWEV*LGPLLS
Trigger: TGAGAGCAGTGGCCCCAGCAATACCTCCCATAGCAG...ATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp TATGAGGAAACTGAGGTCCCCAAAGGAGAAGTTGCCTGCTCAAGATCACTTGGTATGAGAGTGCTGCGCTaGGTGGGTGTCTTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: YEETEVPKGEVACSRSLGMRVLR*VGVFLA
Trigger: GGCCAAGAAGACACCCACCAAGCGCAGCACTCTCAT...ACCAAGTGATCTTGAGCAGGCAACTTCTCCTTTGGGGACCTCAGTTTCCTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp GATCTCCATTACATCCTAGAAGGAGCAGCCTGTTCCAGAAAGGGGAATGAAGACATGAGAGTGCTGCGCTaGGTGGGTGTCTTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: DLHYILEGAACSRKGNEDMRVLR*VGVFLA
Trigger: GGCCAAGAAGACACCCACCAAGCGCAGCACTCTCAT...GTCTTCATTCCCCTTTCTGGAACAGGCTGCTCCTTCTAGGATGTAATGGAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp GCCCCATCCCAAAGGGAATTACCCACCCTCCTGGGACAGAAAAGAAGGGTCACCGCCTTGGGTTTGGATTaGAAGGAAAAGCGCTTGATA +
Preference number: 5 (lower is better)
Translates to: APSQRELPTLLGQKRRVTALGLD*KEKRLI
Trigger: TATCAAGCGCTTTTCCTTCAAATCCAAACCCAAGGC...GGTGACCCTTCTTTTCTGTCCCAGGAGGGTGGGTAATTCCCTTTGGGATGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp ATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACAGGGGTTACCATTGGCCTaGGGTTTGGATTTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: IIVSQHTEVQPCVAPSSQGLPLA*GLDLKE
Trigger: TTCCTTCAAATCCAAACCCAAGGCCAATGGTAACCC...CTGTGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp CTTGGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCGGGCTGGGGTTACCATaGGCCTTGGGTTTGGATTTG +
Preference number: 5 (lower is better)
Translates to: LGLSVADSVFLLPGPAFCGLGLP*ALGLDL
Trigger: CAAATCCAAACCCAAGGCCAATGGTAACCCCAGCCC...GCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp ATCATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCACCTGCTCAAGATCACTaGGTTTGTCTGTGGCAGACT +
Preference number: 5 (lower is better)
Translates to: IIIVSQHTEVQPCVAPSSPAQDH*VCLWQT
Trigger: AGTCTGCCACAGACAAACCAAGTGATCTTGAGCAGG...TGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp TCCTCCCACACCATCCATGTCACAGCCTGGCTGCCTACTGCCTTTCAAAGGATATCCCCAAAGGAGAAGTaGCCTGCTCAAGATCACTTG +
Preference number: 5 (lower is better)
Translates to: SSHTIHVTAWLPTAFQRISPKEK*PAQDHL
Trigger: CAAGTGATCTTGAGCAGGCAACTTCTCCTTTGGGGA...TATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGACATGGATGGTGTGGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS CCA 90 bp CCGCAAAAGAGATATCACGGAGCTGGCCGCTTTGTGAGGACAAACTaGGATTGGGCCTCTTTCCTATGGGAAGACAAAAGCTACCAGAAG +
Preference number: 5 (lower is better)
Translates to: PQKRYHGAGRFVRTN*DWASFLWEDKSYQK
Trigger: CTTCTGGTAGCTTTTGTCTTCCCATAGGAAAGAGGCCCAATCCCAGTTTGTCCTCACAAAGCGGCCAGCTCCGTGATATCTCTTTTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS-3UTR CAA 90 bp GTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGTATTTCTCCCGGAAAGACTaGAAGGCGAAGAGTGACGCC +
Preference number: 5 (lower is better)
Translates to: VLHSAQYPVAAYLVQVLYFSRKD*KAKSDA
Trigger: GGCGTCACTCTTCGCCTTCAAGTCTTTCCGGGAGAA...ATACAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp ATCATCATCGTCTCCCAACACACAGAGGTGCAGCCTTGCGTGGCTCCATCATCAGGGTTACCATTGGCCTaGGGTTTGGATTTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: IIIVSQHTEVQPCVAPSSGLPLA*GLDLKE
Trigger: TTCCTTCAAATCCAAACCCAAGGCCAATGGTAACCC...TGATGATGGAGCCACGCAAGGCTGCACCTCTGTGTGTTGGGAGACGATGATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp CTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGTCCCCAAAGGAGAAGTaGCCTGCTCAAGATCACTTG +
Preference number: 5 (lower is better)
Translates to: LVLHSAQYPVAAYLVQVLSPKEK*PAQDHL
Trigger: CAAGTGATCTTGAGCAGGCAACTTCTCCTTTGGGGA...CAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS TCA 90 bp CTTAACTCTGCCCGCAAAAGAGATATCACGGAGCTGGCCGCTTTGTaGGGACAAACTGGGATTGGGCCTCTTTCCTATGGGAAGACAAAA +
Preference number: 5 (lower is better)
Translates to: LNSARKRDITELAAL*GQTGIGPLSYGKTK
Trigger: TTTTGTCTTCCCATAGGAAAGAGGCCCAATCCCAGTTTGTCCTCACAAAGCGGCCAGCTCCGTGATATCTCTTTTGCGGGCAGAGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS CCA 90 bp AAGAGATATCACGGAGCTGGCCGCTTTGTGAGGACAAACTGGGATTaGGCCTCTTTCCTATGGGAAGACAAAAGCTACCAGAAGGTACTC +
Preference number: 5 (lower is better)
Translates to: KRYHGAGRFVRTNWD*ASFLWEDKSYQKVL
Trigger: GAGTACCTTCTGGTAGCTTTTGTCTTCCCATAGGAAAGAGGCCCAATCCCAGTTTGTCCTCACAAAGCGGCCAGCTCCGTGATATCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS CCA 90 bp CTGTGTACAATCTTAACTCTGCCCGCAAAAGAGATATCACGGAGCTaGCCGCTTTGTGAGGACAAACTGGGATTGGGCCTCTTTCCTATG +
Preference number: 5 (lower is better)
Translates to: LCTILTLPAKEISRS*PLCEDKLGLGLFPM
Trigger: CATAGGAAAGAGGCCCAATCCCAGTTTGTCCTCACAAAGCGGCCAGCTCCGTGATATCTCTTTTGCGGGCAGAGTTAAGATTGTACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS-3UTR CAA 90 bp TGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATTTCTGCTGCATGGGGTaGTCGAGTTCAGCTACACAG +
Preference number: 5 (lower is better)
Translates to: CLWQTQFSCFLVLHSAQYFCCMG*SSSATQ
Trigger: CTGTGTAGCTGAACTCGACAACCCCATGCAGCAGAA...ATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp TCTTCCCTGCAGGAACTTCTTAGCAGATCCACAATGTGTGTCATCTACCCAACCTCTCACTCAGCACAGTaGTCGTCTTCTCGGTCACCT +
Preference number: 5 (lower is better)
Translates to: SSLQELLSRSTMCVIYPTSHSAQ*SSSRSP
Trigger: AGGTGACCGAGAAGACGACAACTGTGCTGAGTGAGA...GGTTGGGTAGATGACACACATTGTGGATCTGCTAAGAAGTTCCTGCAGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp TTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTCCATTGGCCTTGGGTTaGGATTTGAAGGAAAAGCGC +
Preference number: 5 (lower is better)
Translates to: FLLPGPAFCPISCSSLPGPLALG*DLKEKR
Trigger: GCGCTTTTCCTTCAAATCCAAACCCAAGGCCAATGG...ACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAGGAAGCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp ACAGAAAAGAAGGGTCACCTGGGAGAGATGCCCTCTATCATCTGTTCACGGAGGAACCAGGGACACAGTTaGCTAGGATCTATCAATCCC +
Preference number: 5 (lower is better)
Translates to: TEKKGHLGEMPSIICSRRNQGHS*LGSINP
Trigger: GGGATTGATAGATCCTAGCAAACTGTGTCCCTGGTT...CCTCCGTGAACAGATGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS GCA 90 bp TCAGCTCAAGGCAAGAGTAACTTCACTTACCTAAGATGCTGCCTTTaGTTTCCCCTATGCTTGTTAGATTTCCACAGGTCGGACGCCTCC +
Preference number: 5 (lower is better)
Translates to: SAQGKSNFTYLRCCL*FPLCLLDFHRSDAS
Trigger: GGAGGCGTCCGACCTGTGGAAATCTAACAAGCATAGGGGAAAGCAAAGGCAGCATCTTAGGTAAGTGAAGTTACTCTTGCCTTGAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528271.1
CDS-3UTR CAA 90 bp GTCACAGCCTGGCTGCCTACTGCCTTTCAAAGGATAACCAGTTGTCCAGTTTATCATGGTATGCTCAGATaGGTCTACGCAGGTCACATG +
Preference number: 5 (lower is better)
Translates to: VTAWLPTAFQRITSCPVYHGMLR*VYAGHM
Trigger: CATGTGACCTGCGTAGACCAATCTGAGCATACCATG...ATAAACTGGACAACTGGTTATCCTTTGAAAGGCAGTAGGCAGCCAGGCTGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp CAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCATGGTATGCTCAGATaGGTCTACGCAGGTCACATG +
Preference number: 5 (lower is better)
Translates to: QFSCFLVLHSAQYPVAAYHGMLR*VYAGHM
Trigger: CATGTGACCTGCGTAGACCAATCTGAGCATACCATG...GTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp ACAGAAAAGAAGGGTCACCTGGGAGAGATGCCCTCTATCATCTGTTCACGGAGGCTGACTATGGCATCCTaGATCAGTTCCTCAATTGTG +
Preference number: 5 (lower is better)
Translates to: TEKKGHLGEMPSIICSRRLTMAS*ISSSIV
Trigger: CACAATTGAGGAACTGATCAAGGATGCCATAGTCAG...CCTCCGTGAACAGATGATAGAGGGCATCTCTCCCAGGTGACCCTTCTTTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS-3UTR CAA 90 bp CAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACAAATATCCGAACGGGTaGTCTCGTCTGCTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: QFSCFLVLHSAQYPVAAYKYPNG*SRLLPG
Trigger: TCCAGGAAGCAGACGAGACAACCCGTTCGGATATTT...GTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp TGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATAAATATCCGAACGGGTaGTCTCGTCTGCTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: CLWQTQFSCFLVLHSAQYKYPNG*SRLLPG
Trigger: TCCAGGAAGCAGACGAGACAACCCGTTCGGATATTT...ATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp CTTGGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCAACCAGGGACACAGTTaGCTAGGATCTATCAATCCC +
Preference number: 5 (lower is better)
Translates to: LGLSVADSVFLLPGPAFCNQGHS*LGSINP
Trigger: GGGATTGATAGATCCTAGCAAACTGTGTCCCTGGTT...GCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp CAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACGCAGACTCAGTTTTCTaGCTTCCTGGTCCTGCATTC +
Preference number: 5 (lower is better)
Translates to: QFSCFLVLHSAQYPVAAYADSVF*LPGPAF
Trigger: GAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGC...GTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp GATCTCCATTACATCCTAGAAGGAGCAGCCTGTTCCAGAAAGGGGAATGAAGACGCAGACTCAGTTTTCTaGCTTCCTGGTCCTGCATTC +
Preference number: 5 (lower is better)
Translates to: DLHYILEGAACSRKGNEDADSVF*LPGPAF
Trigger: GAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGC...GTCTTCATTCCCCTTTCTGGAACAGGCTGCTCCTTCTAGGATGTAATGGAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp GATCTCCATTACATCCTAGAAGGAGCAGCCTGTTCCAGAAAGGGGAATGAAGACCCTGCTCAAGATCACTaGGTTTGTCTGTGGCAGACT +
Preference number: 5 (lower is better)
Translates to: DLHYILEGAACSRKGNEDPAQDH*VCLWQT
Trigger: AGTCTGCCACAGACAAACCAAGTGATCTTGAGCAGG...GTCTTCATTCCCCTTTCTGGAACAGGCTGCTCCTTCTAGGATGTAATGGAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS GCA 90 bp CCACACTCAGCTCAAGGCAAGAGTAACTTCACTTACCTAAGATGCTaGCTTTGCTTTCCCCTATGCTTGTTAGATTTCCACAGGTCGGAC +
Preference number: 5 (lower is better)
Translates to: PHSAQGKSNFTYLRC*LCFPLCLLDFHRSD
Trigger: GTCCGACCTGTGGAAATCTAACAAGCATAGGGGAAAGCAAAGGCAGCATCTTAGGTAAGTGAAGTTACTCTTGCCTTGAGCTGAGTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528271.1
ENST00000529600.1
CDS GCA 90 bp CTCAGTTGCAAGCCACCCTCTTTCATTTGCTCCAGCTCTTCCCTCTaGCGAGAATACTTTCACACTCTGATGAAATCCTACTCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: LSCKPPSFICSSSSL*REYFHTLMKSYSCS
Trigger: AGAGCAAGAGTAGGATTTCATCAGAGTGTGAAAGTATTCTCGGCAGAGGGAAGAGCTGGAGCAAATGAAAGAGGGTGGCTTGCAACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1
CDS CCA 90 bp GCTGGCCGCTTTGTGAGGACAAACTGGGATTGGGCCTCTTTCCTATaGGAAGACAAAAGCTACCAGAAGGTACTCCCAAAAGTCTATAAA +
Preference number: 5 (lower is better)
Translates to: AGRFVRTNWDWASFL*EDKSYQKVLPKVYK
Trigger: TTTATAGACTTTTGGGAGTACCTTCTGGTAGCTTTTGTCTTCCCATAGGAAAGAGGCCCAATCCCAGTTTGTCCTCACAAAGCGGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS-3UTR CAA 90 bp GATCTCCATTACATCCTAGAAGGAGCAGCCTGTTCCAGAAAGGGGAATGAAGACTTGAAGGAAAAGCGCTaGATAAGGCGGCGAGAAAAG +
Preference number: 5 (lower is better)
Translates to: DLHYILEGAACSRKGNEDLKEKR*IRRREK
Trigger: CTTTTCTCGCCGCCTTATCAAGCGCTTTTCCTTCAA...GTCTTCATTCCCCTTTCTGGAACAGGCTGCTCCTTCTAGGATGTAATGGAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp TCTTCCCTGCAGGAACTTCTTAGCAGATCCACAATGTGTGTCATCTACCCAACCTTGAAGGAAAAGCGCTaGATAAGGCGGCGAGAAAAG +
Preference number: 5 (lower is better)
Translates to: SSLQELLSRSTMCVIYPTLKEKR*IRRREK
Trigger: CTTTTCTCGCCGCCTTATCAAGCGCTTTTCCTTCAA...GGTTGGGTAGATGACACACATTGTGGATCTGCTAAGAAGTTCCTGCAGGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp CTTGGTTTGTCTGTGGCAGACTCAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCGCCTTGGGTTTGGATTaGAAGGAAAAGCGCTTGATA +
Preference number: 5 (lower is better)
Translates to: LGLSVADSVFLLPGPAFCALGLD*KEKRLI
Trigger: TATCAAGCGCTTTTCCTTCAAATCCAAACCCAAGGC...GCAGAATGCAGGACCAGGAAGCAAGAAAACTGAGTCTGCCACAGACAAACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS-3UTR CAA 90 bp GTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGGTTCAAGTCCTGTATGGGTTACCATTGGCCTaGGGTTTGGATTTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: VLHSAQYPVAAYLVQVLYGLPLA*GLDLKE
Trigger: TTCCTTCAAATCCAAACCCAAGGCCAATGGTAACCC...ATACAGGACTTGAACCAGGTAAGCTGCTACAGGATATTGGGCAGAATGCAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS TCA 90 bp GACAAAGATTGGGAGGAAGATGTGGTAGGACTGGAATGGAATGTCTaGAAACAGGGGGAGTTGGAATTAAGGCTCTCTCCTCTTTCACTG +
Preference number: 5 (lower is better)
Translates to: DKDWEEDVVGLEWNV*KQGELELRLSPLSL
Trigger: CAGTGAAAGAGGAGAGAGCCTTAATTCCAACTCCCCCTGTTTTCAGACATTCCATTCCAGTCCTACCACATCTTCCTCCCAATCTTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1
CDS-3UTR CAA 90 bp CAGTTTTCTTGCTTCCTGGTCCTGCATTCTGCCCAATATCCTGTAGCAGCTTACCTGACTATGGCATCCTaGATCAGTTCCTCAATTGTG +
Preference number: 5 (lower is better)
Translates to: QFSCFLVLHSAQYPVAAYLTMAS*ISSSIV
Trigger: CACAATTGAGGAACTGATCAAGGATGCCATAGTCAG...GTAAGCTGCTACAGGATATTGGGCAGAATGCAGGACCAGGAAGCAAGAAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS TCA 90 bp AGATGCAGACTTTGGGTGACTCAGAGGGCAAGAATGATTAAAGGGTaGTTAATCACAAGGGTGATTAGGAAGATGCCGTGGGGACTAAAA +
Preference number: 5 (lower is better)
Translates to: RCRLWVTQRARMIKG*LITRVIRKMPWGLK
Trigger: TTTTAGTCCCCACGGCATCTTCCTAATCACCCTTGTGATTAATCACCCTTTAATCATTCTTGCCCTCTGAGTCACCCAAAGTCTGCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS GCA 90 bp AGCCTCTCATCTTTTAAAGTTAGAAGAACTACCACCACTGGTCACTaGCTGTCTTGCTGCCAGATGGATAATCCAAGGGTAGGATTTCTT +
Preference number: 5 (lower is better)
Translates to: SLSSFKVRRTTTTGH*LSCCQMDNPRVGFL
Trigger: AAGAAATCCTACCCTTGGATTATCCATCTGGCAGCAAGACAGGCAGTGACCAGTGGTGGTAGTTCTTCTAACTTTAAAAGATGAGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS GCA 90 bp TCCCTCTGCCGAGAATACTTTCACACTCTGATGAAATCCTACTCTTaGTCTAAAGTGTGGTTTAAATGTCATCTCCTCCATGAAGCCTAC +
Preference number: 5 (lower is better)
Translates to: SLCREYFHTLMKSYS*SKVWFKCHLLHEAY
Trigger: GTAGGCTTCATGGAGGAGATGACATTTAAACCACACTTTAGAGCAAGAGTAGGATTTCATCAGAGTGTGAAAGTATTCTCGGCAGAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1
CDS GCA 90 bp TTTAAAGTTAGAAGAACTACCACCACTGGTCACTGCCTGTCTTGCTaGCAGATGGATAATCCAAGGGTAGGATTTCTTATACTCATTGGG +
Preference number: 5 (lower is better)
Translates to: FKVRRTTTTGHCLSC*QMDNPRVGFLILIG
Trigger: CCCAATGAGTATAAGAAATCCTACCCTTGGATTATCCATCTGGCAGCAAGACAGGCAGTGACCAGTGGTGGTAGTTCTTCTAACTTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS CCA 90 bp CAAACATGTGCTTTATCCTTCCTGAGGCAAAAATCGTGGTACTTGTaGGGATCTGTGTACAATCTTAACTCTGCCCGCAAAAGAGATATC +
Preference number: 5 (lower is better)
Translates to: QTCALSFLRQKSWYL*GSVYNLNSARKRDI
Trigger: GATATCTCTTTTGCGGGCAGAGTTAAGATTGTACACAGATCCCCACAAGTACCACGATTTTTGCCTCAGGAAGGATAAAGCACATGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS GCA 90 bp TCTTTTAAAGTTAGAAGAACTACCACCACTGGTCACTGCCTGTCTTaGTGCCAGATGGATAATCCAAGGGTAGGATTTCTTATACTCATT +
Preference number: 5 (lower is better)
Translates to: SFKVRRTTTTGHCLS*CQMDNPRVGFLILI
Trigger: AATGAGTATAAGAAATCCTACCCTTGGATTATCCATCTGGCAGCAAGACAGGCAGTGACCAGTGGTGGTAGTTCTTCTAACTTTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS GCA 72 bp GGCTCGCGGGCCGGCACCGGCTCCGGGAGGGCTGCGTaGGCAGAGCTGACACTGACAACACCGCCGGCGCCC +
Preference number: 6 (lower is better)
Translates to: GSRAGTGSGRAA*AELTLTTPPAP
Trigger: GGGCGCCGGCGGTGTTGTCAGTGTCAGCTCTGCGCACGCAGCCCTCCCGGAGCCGGTGCCGGCCCGCGAGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528271.1
ENST00000529600.1
CDS CCA 72 bp CGCCGGACCCTGGAGGGGACTGGTCTGCAGAGACGCTaGGGCTCGCGGGCCGGCACCGGCTCCGGGAGGGCT +
Preference number: 6 (lower is better)
Translates to: RRTLEGTGLQRR*GSRAGTGSGRA
Trigger: AGCCCTCCCGGAGCCGGTGCCGGCCCGCGAGCCCCAGCGTCTCTGCAGACCAGTCCCCTCCAGGGTCCGGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527854.1
ENST00000528271.1
ENST00000529600.1
ENST00000534024.1
ENST00000648610.2
CDS CCA 72 bp GCCGGGCGGGGCCAGGACAGCCTGGCGCTCCCTCGCTaGAGGAGGGCGGGAGGGCTAGCAGCGAGCGGAGGA +
Preference number: 6 (lower is better)
Translates to: AGRGQDSLALPR*RRAGGLAASGG
Trigger: TCCTCCGCTCGCTGCTAGCCCTCCCGCCCTCCTCCAGCGAGGGAGCGCCAGGCTGTCCTGGCCCCGCCCGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528271.1
ENST00000529600.1
CDS GCA 72 bp CTGGGGCTCGCGGGCCGGCACCGGCTCCGGGAGGGCTaGGTGCGCAGAGCTGACACTGACAACACCGCCGGC +
Preference number: 6 (lower is better)
Translates to: LGLAGRHRLREG*VRRADTDNTAG
Trigger: GCCGGCGGTGTTGTCAGTGTCAGCTCTGCGCACGCAGCCCTCCCGGAGCCGGTGCCGGCCCGCGAGCCCCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528271.1
ENST00000529600.1
CDS GCA 72 bp CTTGGTCAGCAGTCGGACCCGTTAGTCGCCGGCCAGTaGCCGACTCCTCCCACCGCGCGGGCCCCGCCGGAC +
Preference number: 6 (lower is better)
Translates to: LGQQSDPLVAGQ*PTPPTARAPPD
Trigger: GTCCGGCGGGGCCCGCGCGGTGGGAGGAGTCGGGCACTGGCCGGCGACTAACGGGTCCGACTGCTGACCAAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336702.7
ENST00000527854.1
ENST00000528271.1
ENST00000529600.1
ENST00000534024.1
ENST00000648610.2
CDS GCA 72 bp CCGCGGGCCCGCGCCAGCCACAAGCCCCGGGCATATTaGAGCAGCCAGGCGAACACCGTGAGCAGCGAGGCG +
Preference number: 6 (lower is better)
Translates to: PRARASHKPRAY*SSQANTVSSEA
Trigger: CGCCTCGCTGCTCACGGTGTTCGCCTGGCTGCTGCAATATGCCCGGGGCTTGTGGCTGGCGCGGGCCCGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS CAA 72 bp CCCGCGGGCCCGCGCCAGCCACAAGCCCCGGGCATATaGCAGCAGCCAGGCGAACACCGTGAGCAGCGAGGC +
Preference number: 6 (lower is better)
Translates to: PAGPRQPQAPGI*QQPGEHREQRG
Trigger: GCCTCGCTGCTCACGGTGTTCGCCTGGCTGCTGCAATATGCCCGGGGCTTGTGGCTGGCGCGGGCCCGCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS TCA 72 bp AGCCCCGGGCATATTGCAGCAGCCAGGCGAACACCGTaGGCAGCGAGGCGGCGAAGAGGATCAGCAAGGCCG +
Preference number: 6 (lower is better)
Translates to: SPGHIAAARRTP*AARRRRGSARP
Trigger: CGGCCTTGCTGATCCTCTTCGCCGCCTCGCTGCTCACGGTGTTCGCCTGGCTGCTGCAATATGCCCGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS TCA 72 bp GGCACCCTGCCAACGTCCCCCTACCTTTGTGATCCTTaGGGCTGCGGGTCTCCAGGGCACCAGTGGACCCCG +
Preference number: 6 (lower is better)
Translates to: GTLPTSPYLCDP*GCGSPGHQWTP
Trigger: CGGGGTCCACTGGTGCCCTGGAGACCCGCAGCCTCAAGGATCACAAAGGTAGGGGGACGTTGGCAGGGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS CCA 72 bp TCCTCGGGGGTCGCGATGCCGGGGTCTCTGTCTCCGTaGTCCGGGTCTCTCCTAGCTTGGTCAGCAGTCGGA +
Preference number: 6 (lower is better)
Translates to: SSGVAMPGSLSP*SGSLLAWSAVG
Trigger: TCCGACTGCTGACCAAGCTAGGAGAGACCCGGACCACGGAGACAGAGACCCCGGCATCGCGACCCCCGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000336702.7
ENST00000527854.1
ENST00000529600.1
ENST00000534024.1
ENST00000648610.2
CDS CCA 72 bp GGAGACGGCAGCGGGGGACTGCTGGGTCACAGAGACTaGGAACCGCACCTCCTCAGCAGAGAGCTGGCAACG +
Preference number: 6 (lower is better)
Translates to: GDGSGGLLGHRD*EPHLLSRELAT
Trigger: CGTTGCCAGCTCTCTGCTGAGGAGGTGCGGTTCCCAGTCTCTGTGACCCAGCAGTCCCCCGCTGCCGTCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000529874.5
ENST00000648610.2
CDS TCA 72 bp GCACCCAAGCCCGCTGCCAGTTCTCCCGGAAAGACTTaGAGGCGAAGAGTGACGCCAGGAGGCCCCGGACTC +
Preference number: 6 (lower is better)
Translates to: APKPAASSPGKT*RRRVTPGGPGL
Trigger: GAGTCCGGGGCCTCCTGGCGTCACTCTTCGCCTTCAAGTCTTTCCGGGAGAACTGGCAGCGGGCTTGGGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS GCA 72 bp GCCCTCCTCATAGTGAAGCTCCACTGCCATGGTGGCTaGTGGTCCCAGGGCTTTCCCTGGCCCTGGGGTGAG +
Preference number: 6 (lower is better)
Translates to: ALLIVKLHCHGG*WSQGFPWPWGE
Trigger: CTCACCCCAGGGCCAGGGAAAGCCCTGGGACCAGCAGCCACCATGGCAGTGGAGCTTCACTATGAGGAGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000533458.1
ENST00000648610.2
CDS CCA 72 bp CTGGTGGGTCTGAGGGAGGTGAAGAGGGGCCTCCGCTaGTCCCTGCATCATCCTGCACTGAGGCTTCCAGGG +
Preference number: 6 (lower is better)
Translates to: LVGLREVKRGLR*SLHHPALRLPG
Trigger: CCCTGGAAGCCTCAGTGCAGGATGATGCAGGGACCAGCGGAGGCCCCTCTTCACCTCCCTCAGACCCACCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000648610.2
CDS CCA 72 bp TCAGCACAGTTGTCGTCTTCTCGGTCACCTCCACCTTaGACGGGGAGCGGGAGGGGGAGTCTGGTGGGTGGG +
Preference number: 6 (lower is better)
Translates to: SAQLSSSRSPPP*TGSGRGSLVGG
Trigger: CCCACCCACCAGACTCCCCCTCCCGCTCCCCGTCCAAGGTGGAGGTGACCGAGAAGACGACAACTGTGCTGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS CAA 90 bp TGGCCTAGGAGTTCGGTGTCTCCACAGCTGCTGCTCCTCAGCACTTaGAGGGTCAGCTCCCGGCTCTGGGGGCCCAGATCCAGTGCCAGG +
Preference number: 6 (lower is better)
Translates to: WPRSSVSPQLLLLST*RVSSRLWGPRSSAR
Trigger: CCTGGCACTGGATCTGGGCCCCCAGAGCCGGGAGCTGACCCTCAAAGTGCTGAGGAGCAGCAGCTGTGGAGACACCGAACTCCTAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS CAA 90 bp TCTCGGTCACCTCCACTGTCTCCACAGCTGCTGCTCCTCAGCACTTaGAGGGTCAGCTCCCGGCTCTGGGGGCCCAGATCCAGTGCCAGG +
Preference number: 6 (lower is better)
Translates to: SRSPPLSPQLLLLST*RVSSRLWGPRSSAR
Trigger: CCTGGCACTGGATCTGGGCCCCCAGAGCCGGGAGCTGACCCTCAAAGTGCTGAGGAGCAGCAGCTGTGGAGACAGTGGAGGTGACCGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529874.5
CDS CAA 90 bp TGGCCTAGGAGTTCGGTGTCTCCACAGCTGCTGCTCCTCAGCACTTaGAGGGTCAGCTCCCGGCTCTGGGGGCCCAGATCCCTGTGGGAC +
Preference number: 6 (lower is better)
Translates to: WPRSSVSPQLLLLST*RVSSRLWGPRSLWD
Trigger: GTCCCACAGGGATCTGGGCCCCCAGAGCCGGGAGCTGACCCTCAAAGTGCTGAGGAGCAGCAGCTGTGGAGACACCGAACTCCTAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS GCA 72 bp AAGGCGATTTGGATGGAGCTCCCGTTTCTGCAGGCCTaGTCGTTCAGCGCTCGCACCCAAGCCCGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: KAIWMELPFLQA*SFSARTQARCQ
Trigger: CTGGCAGCGGGCTTGGGTGCGAGCGCTGAACGAGCAGGCCTGCAGAAACGGGAGCTCCATCCAAATCGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS CCA 72 bp GTCTTCTTGGCCACCCGCCCACTGGGCTCTGTCAGCTaGCGAATCGCTGTCTCTGCTACAGGGTCCAAGCCG +
Preference number: 6 (lower is better)
Translates to: VFLATRPLGSVS*RIAVSATGSKP
Trigger: CGGCTTGGACCCTGTAGCAGAGACAGCGATTCGCCAGCTGACAGAGCCCAGTGGGCGGGTGGCCAAGAAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000529874.5
ENST00000648610.2
CDS CCA 72 bp CTGCTCCTCAGCACTTTGAGGGTCAGCTCCCGGCTCTaGGGGCCCAGATCCCTGTGGGACAAGAGGAGATGG +
Preference number: 6 (lower is better)
Translates to: LLLSTLRVSSRL*GPRSLWDKRRW
Trigger: CCATCTCCTCTTGTCCCACAGGGATCTGGGCCCCCAGAGCCGGGAGCTGACCCTCAAAGTGCTGAGGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1
CDS GCA 72 bp CAGGCCTGCTCGTTCAGCGCTCGCACCCAAGCCCGCTaGCAGTTCTCCCGGAAAGACTTGAAGGCGAAGAGT +
Preference number: 6 (lower is better)
Translates to: QACSFSARTQAR*QFSRKDLKAKS
Trigger: ACTCTTCGCCTTCAAGTCTTTCCGGGAGAACTGGCAGCGGGCTTGGGTGCGAGCGCTGAACGAGCAGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS CCA 72 bp GGCGAATCGCTGTCTCTGCTACAGGGTCCAAGCCGTTaGAAAGGTGGCTGTCCCCTGGGCTGCTGCTATGGG +
Preference number: 6 (lower is better)
Translates to: GESLSLLQGPSR*KGGCPLGCCYG
Trigger: CCCATAGCAGCAGCCCAGGGGACAGCCACCTTTCCAACGGCTTGGACCCTGTAGCAGAGACAGCGATTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336702.7
CDS CCA 72 bp TGCGCTTGGTGGGTGTCTTCTTGGCCACCCGCCCACTaGGCTCTGTCAGCTGGCGAATCGCTGTCTCTGCTA +
Preference number: 6 (lower is better)
Translates to: CAWWVSSWPPAH*ALSAGESLSLL
Trigger: TAGCAGAGACAGCGATTCGCCAGCTGACAGAGCCCAGTGGGCGGGTGGCCAAGAAGACACCCACCAAGCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000529874.5
ENST00000648610.2
CDS CCA 72 bp GGCGAATCGCTGTCTCTGCTACAGGGTCCAAGCCGTTaGAAAGGTGGCTGTCCCGGCTGCTGCTATGGGAGG +
Preference number: 6 (lower is better)
Translates to: GESLSLLQGPSR*KGGCPGCCYGR
Trigger: CCTCCCATAGCAGCAGCCGGGACAGCCACCTTTCCAACGGCTTGGACCCTGTAGCAGAGACAGCGATTCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528586.2
ENST00000529874.5
ENST00000648610.2
CDS CCA 72 bp TCCTCGGGGGTCGCGATGCCGGGGTCTCTGTCTCCGTaGTCCGGGTCTCTCCTAAGATGCTGCCTTTGCTTT +
Preference number: 6 (lower is better)
Translates to: SSGVAMPGSLSP*SGSLLRCCLCF
Trigger: AAAGCAAAGGCAGCATCTTAGGAGAGACCCGGACCACGGAGACAGAGACCCCGGCATCGCGACCCCCGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529885.1
CDS CAA 72 bp GAGATGATGAGAGTGCTGCGCTTGGTGGGTGTCTTCTaGGCCACCCGCCCACTGGGCTCTGTCAGCTGGCGA +
Preference number: 6 (lower is better)
Translates to: EMMRVLRLVGVF*ATRPLGSVSWR
Trigger: TCGCCAGCTGACAGAGCCCAGTGGGCGGGTGGCCAAGAAGACACCCACCAAGCGCAGCACTCTCATCATCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000529874.5
ENST00000648610.2
CDS CAA 90 bp TCGGATCCAGCCCTCGCGGGCTTGGTCCACTTCTGCTGCATGGGGTaGTCGAGTTCAGCTACACAGCACAGTTCCTCGGTGCCTTCCAGC +
Preference number: 6 (lower is better)
Translates to: SDPALAGLVHFCCMG*SSSATQHSSSVPSS
Trigger: GCTGGAAGGCACCGAGGAACTGTGCTGTGTAGCTGAACTCGACAACCCCATGCAGCAGAAGTGGACCAAGCCCGCGAGGGCTGGATCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000529874.5
ENST00000648610.2
CDS CAA 90 bp GCCAGGTCTTCTGTCCACTCCACCTCGGATCCAGCCCTCGCGGGCTaGGTCCACTTCTGCTGCATGGGGTTGTCGAGTTCAGCTACACAG +
Preference number: 6 (lower is better)
Translates to: ARSSVHSTSDPALAG*VHFCCMGLSSSATQ
Trigger: CTGTGTAGCTGAACTCGACAACCCCATGCAGCAGAAGTGGACCAAGCCCGCGAGGGCTGGATCCGAGGTGGAGTGGACAGAAGACCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000529874.5
ENST00000648610.2
CDS CAA 90 bp TGCTATGGGAGGTATTGCTGGGGCCACTGCTCTCACTCAGCACAGTaGTCGTCTTCTCGGTCACCTCCACCTTGGACGGGGAGCGGGAGG +
Preference number: 6 (lower is better)
Translates to: CYGRYCWGHCSHSAQ*SSSRSPPPWTGSGR
Trigger: CCTCCCGCTCCCCGTCCAAGGTGGAGGTGACCGAGAAGACGACAACTGTGCTGAGTGAGAGCAGTGGCCCCAGCAATACCTCCCATAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000648610.2
CDS TCA 72 bp CATCCCCTTCTACCTGTGTTGGTGGCAGTGTCAGAGTaGCGTGGTAGGTCTCCATGGAGACGGCAGCGGGGG +
Preference number: 6 (lower is better)
Translates to: HPLLPVLVAVSE*RGRSPWRRQRG
Trigger: CCCCCGCTGCCGTCTCCATGGAGACCTACCACGTCACTCTGACACTGCCACCAACACAGGTAGAAGGGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS GCA 72 bp CCCACTGGGCTCTGTCAGCTGGCGAATCGCTGTCTCTaGTACAGGGTCCAAGCCGTTGGAAAGGTGGCTGTC +
Preference number: 6 (lower is better)
Translates to: PTGLCQLANRCL*YRVQAVGKVAV
Trigger: GACAGCCACCTTTCCAACGGCTTGGACCCTGTAGCAGAGACAGCGATTCGCCAGCTGACAGAGCCCAGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000529874.5
ENST00000648610.2
CDS GCA 72 bp TGGAGCATGGGGTCGGGGCAGGGTTACTCCTTACAGTaGCAGGTCTTCTGTCCACTCCACCTCGGATCCAGC +
Preference number: 6 (lower is better)
Translates to: WSMGSGQGYSLQ*QVFCPLHLGSS
Trigger: GCTGGATCCGAGGTGGAGTGGACAGAAGACCTGGCACTGTAAGGAGTAACCCTGCCCCGACCCCATGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1
CDS CAA 72 bp GCCCTCGCGGGCTTGGTCCACTTCTGCTGCATGGGGTaGTCGAGTTCAGCTACACAGCACAGTTCCTCGGTG +
Preference number: 6 (lower is better)
Translates to: ALAGLVHFCCMG*SSSATQHSSSV
Trigger: CACCGAGGAACTGTGCTGTGTAGCTGAACTCGACAACCCCATGCAGCAGAAGTGGACCAAGCCCGCGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000529874.5
ENST00000648610.2
CDS CAA 72 bp TCTGTCCACTCCACCTCGGATCCAGCCCTCGCGGGCTaGGTCCACTTCTGCTGCATGGGGTTGTCGAGTTCA +
Preference number: 6 (lower is better)
Translates to: SVHSTSDPALAG*VHFCCMGLSSS
Trigger: TGAACTCGACAACCCCATGCAGCAGAAGTGGACCAAGCCCGCGAGGGCTGGATCCGAGGTGGAGTGGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000529874.5
ENST00000648610.2
CDS CAA 72 bp TGGCGAATCGCTGTCTCTGCTACAGGGTCCAAGCCGTaGGAAAGGTGGCTGTCCCCTGGGCTGCTGCTATGG +
Preference number: 6 (lower is better)
Translates to: WRIAVSATGSKP*ERWLSPGLLLW
Trigger: CCATAGCAGCAGCCCAGGGGACAGCCACCTTTCCAACGGCTTGGACCCTGTAGCAGAGACAGCGATTCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336702.7
CDS CAA 72 bp TGGCGAATCGCTGTCTCTGCTACAGGGTCCAAGCCGTaGGAAAGGTGGCTGTCCCGGCTGCTGCTATGGGAG +
Preference number: 6 (lower is better)
Translates to: WRIAVSATGSKP*ERWLSRLLLWE
Trigger: CTCCCATAGCAGCAGCCGGGACAGCCACCTTTCCAACGGCTTGGACCCTGTAGCAGAGACAGCGATTCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528586.2
ENST00000529874.5
ENST00000648610.2
CDS CAA 90 bp GAAACACCAGAGATGATGAGAGTGCTGCGCTTGGTGGGTGTCTTCTaGGCCACCCGCCCACTGGGCTCTGTCAGCTGGCGAATCGCTGTC +
Preference number: 6 (lower is better)
Translates to: ETPEMMRVLRLVGVF*ATRPLGSVSWRIAV
Trigger: GACAGCGATTCGCCAGCTGACAGAGCCCAGTGGGCGGGTGGCCAAGAAGACACCCACCAAGCGCAGCACTCTCATCATCTCTGGTGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000529874.5
ENST00000648610.2
CDS TCA 72 bp CGTAGGAATAACCGGTTAGGTCTGGGGATGGCTGGCTaGGCCTGGGGCATCATGGGTGGCTTCTCACTGGGT +
Preference number: 6 (lower is better)
Translates to: RRNNRLGLGMAG*AWGIMGGFSLG
Trigger: ACCCAGTGAGAAGCCACCCATGATGCCCCAGGCTCAGCCAGCCATCCCCAGACCTAACCGGTTATTCCTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000529874.5
ENST00000648610.2
CDS TCA 72 bp TCCACAGGTCGGACGCCTGTGAGGTTAAGAAGGAGGTaGCCCCTGTGGAAATCACCGCCCCCTTCTCCCAAC +
Preference number: 6 (lower is better)
Translates to: STGRTPVRLRRR*PLWKSPPPSPN
Trigger: GTTGGGAGAAGGGGGCGGTGATTTCCACAGGGGTCACCTCCTTCTTAACCTCACAGGCGTCCGACCTGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527854.1
ENST00000529885.1
CDS GCA 72 bp CCCGGCTGCTGCTATGGGAGGTATTGCTGGGGCCACTaGTCTCACTCAGCACAGTTGTCGTCTTCTCGGTCA +
Preference number: 6 (lower is better)
Translates to: PGCCYGRYCWGH*SHSAQLSSSRS
Trigger: TGACCGAGAAGACGACAACTGTGCTGAGTGAGAGCAGTGGCCCCAGCAATACCTCCCATAGCAGCAGCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528586.2
ENST00000529874.5
ENST00000648610.2
CDS GCA 72 bp CAGAGGCCTCTGGGTTTGTTGGAGGACCCCAGGGGGTaGTGGAGGGCTGAGGGTAGCAGGATGGACAATTAT +
Preference number: 6 (lower is better)
Translates to: QRPLGLLEDPRG*WRAEGSRMDNY
Trigger: ATAATTGTCCATCCTGCTACCCTCAGCCCTCCAGCACCCCCTGGGGTCCTCCAACAAACCCAGAGGCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1
CDS CCA 72 bp TCAGCACAGTTGTCGTCTTCTCGGTCACCTCCACCTTaGACGGGGAGCGGGAGGGGGAGTCTAATTTGCCGT +
Preference number: 6 (lower is better)
Translates to: SAQLSSSRSPPP*TGSGRGSLICR
Trigger: ACGGCAAATTAGACTCCCCCTCCCGCTCCCCGTCCAAGGTGGAGGTGACCGAGAAGACGACAACTGTGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS CAA 72 bp TCTGGGTGGGAGTTGGGGCACCTCCTCAAAGGCGATTaGGATGGAGCTCCCGTTTCTGCAGGCCTGCTCGTT +
Preference number: 6 (lower is better)
Translates to: SGWELGHLLKGD*DGAPVSAGLLV
Trigger: AACGAGCAGGCCTGCAGAAACGGGAGCTCCATCCAAATCGCCTTTGAGGAGGTGCCCCAACTCCCACCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336702.7
ENST00000648610.2
CDS CAA 90 bp CTGCTCTCACTCAGCACAGTTGTCGTCTTCTCGGTCACCTCCACCTaGGACGGGGAGCGGGAGGGGGAGTCTAATTTGCCGTCTATACGG +
Preference number: 6 (lower is better)
Translates to: LLSLSTVVVFSVTST*DGEREGESNLPSIR
Trigger: CCGTATAGACGGCAAATTAGACTCCCCCTCCCGCTCCCCGTCCAAGGTGGAGGTGACCGAGAAGACGACAACTGTGCTGAGTGAGAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS CAA 90 bp TCTGTCAGCTGGCGAATCGCTGTCTCTGCTACAGGGTCCAAGCCGTaGGAAAGGTGGCTGTCCCCTGGGCTGCTGCTATGGGAGGTATTG +
Preference number: 6 (lower is better)
Translates to: SVSWRIAVSATGSKP*ERWLSPGLLLWEVL
Trigger: CAATACCTCCCATAGCAGCAGCCCAGGGGACAGCCACCTTTCCAACGGCTTGGACCCTGTAGCAGAGACAGCGATTCGCCAGCTGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336702.7
CDS CAA 90 bp GGGCTTTCTCCCCATCCCAGCTCCTCTCCCCAGAGCCCTGTTACCTaGGAAACACCAGAGATGATGAGAGTGCTGCGCTTGGTGGGTGTC +
Preference number: 6 (lower is better)
Translates to: GLSPHPSSSPQSPVT*ETPEMMRVLRLVGV
Trigger: GACACCCACCAAGCGCAGCACTCTCATCATCTCTGGTGTTTCCAAGGTAACAGGGCTCTGGGGAGAGGAGCTGGGATGGGGAGAAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529874.5
CDS GCA 72 bp CTGGGCTGCTGCTATGGGAGGTATTGCTGGGGCCACTaGTCTCACTCAGCACAGTTGTCGTCTTCTCGGTCA +
Preference number: 6 (lower is better)
Translates to: LGCCYGRYCWGH*SHSAQLSSSRS
Trigger: TGACCGAGAAGACGACAACTGTGCTGAGTGAGAGCAGTGGCCCCAGCAATACCTCCCATAGCAGCAGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336702.7
CDS GCA 72 bp CCGGCACCGGCTCCGGGAGGGCTAAGATGCTGCCTTTaGTTTCCCCTATGCTTGTTAGATTTCCACAGGTCG +
Preference number: 6 (lower is better)
Translates to: PAPAPGGLRCCL*FPLCLLDFHRS
Trigger: CGACCTGTGGAAATCTAACAAGCATAGGGGAAAGCAAAGGCAGCATCTTAGCCCTCCCGGAGCCGGTGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527854.1
CDS GCA 72 bp CACGGCTGCTGCTATGGGAGGTATTGCTGGGGCCACTaGTCTCACTCAGCACAGTTGTCGTCTTCTCGGTCA +
Preference number: 6 (lower is better)
Translates to: HGCCYGRYCWGH*SHSAQLSSSRS
Trigger: TGACCGAGAAGACGACAACTGTGCTGAGTGAGAGCAGTGGCCCCAGCAATACCTCCCATAGCAGCAGCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS GCA 72 bp GGGCTTGGCTTCCGACTATGTTGGCAACAGGTTTCCTaGAAGAAACAGGCGCGTCTCCACACCCTCGTCCCT +
Preference number: 6 (lower is better)
Translates to: GLGFRLCWQQVS*KKQARLHTLVP
Trigger: AGGGACGAGGGTGTGGAGACGCGCCTGTTTCTTGCAGGAAACCTGTTGCCAACATAGTCGGAAGCCAAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534024.1
CDS CCA 72 bp GGGGAGTCTAATTTGCCGTCTATACGGGGCCGGGACTaGACAGTGGTGACTGTGGTGACAATGGTGCCATCG +
Preference number: 6 (lower is better)
Translates to: GESNLPSIRGRD*TVVTVVTMVPS
Trigger: CGATGGCACCATTGTCACCACAGTCACCACTGTCCAGTCCCGGCCCCGTATAGACGGCAAATTAGACTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000528586.2
ENST00000648610.2
CDS CCA 72 bp GTGCTGGAAAGGTTTGATCCTCTCTGCTCTGGAGCATaGGGTCGGGGCAGGGTTACTCCTTACAGTGCCAGG +
Preference number: 6 (lower is better)
Translates to: VLERFDPLCSGA*GRGRVTPYSAR
Trigger: CCTGGCACTGTAAGGAGTAACCCTGCCCCGACCCCATGCTCCAGAGCAGAGAGGATCAAACCTTTCCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1
CDS CAA 72 bp GCCGGCACCGGCTCCGGGAGGGCTAAGATGCTGCCTTaGCTTTCCCCTATGCTTGTTAGATTTCCACAGGTC +
Preference number: 6 (lower is better)
Translates to: AGTGSGRAKMLP*LSPMLVRFPQV
Trigger: GACCTGTGGAAATCTAACAAGCATAGGGGAAAGCAAAGGCAGCATCTTAGCCCTCCCGGAGCCGGTGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527854.1
CDS TCA 72 bp TGGTATGCTCAGATTGGTCTACGCAGGTCACATGACTaGTGCTGGCTCTGGGTGGGAGTTGGGGCACCTCCT +
Preference number: 6 (lower is better)
Translates to: WYAQIGLRRSHD*CWLWVGVGAPP
Trigger: AGGAGGTGCCCCAACTCCCACCCAGAGCCAGCATCAGTCATGTGACCTGCGTAGACCAATCTGAGCATACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000529874.5
ENST00000648610.2
CDS TCA 72 bp AGAGCTGATTCCTGCAAGGACTGTGCTGGAAAGGTTTaGTCCTCTCTGCTCTGGAGCATGGGGTCGGGGCAG +
Preference number: 6 (lower is better)
Translates to: RADSCKDCAGKV*SSLLWSMGSGQ
Trigger: CTGCCCCGACCCCATGCTCCAGAGCAGAGAGGATCAAACCTTTCCAGCACAGTCCTTGCAGGAATCAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1
CDS CCA 72 bp ACAGAGACTGGGAACCGCACCTCCTCAGCAGAGAGCTaGCAACGCAGCACCATGGTATGCTCAGATTGGTCT +
Preference number: 6 (lower is better)
Translates to: TETGNRTSSAES*QRSTMVCSDWS
Trigger: AGACCAATCTGAGCATACCATGGTGCTGCGTTGCCAGCTCTCTGCTGAGGAGGTGCGGTTCCCAGTCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000529874.5
ENST00000648610.2
CDS CCA 72 bp TGGGGCAGAGCAAGCCCTGAGGTTGACCATCATGGCTaGCTGGGTGCTGACTATGGCATCCTTGATCAGTTC +
Preference number: 6 (lower is better)
Translates to: WGRASPEVDHHG*LGADYGILDQF
Trigger: GAACTGATCAAGGATGCCATAGTCAGCACCCAGCCAGCCATGATGGTCAACCTCAGGGCTTGCTCTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000529874.5
ENST00000648610.2
CDS CAA 90 bp CCGGCTCCGGGAGGGCTAAGATGCTGCCTTTGCTTTCCCCTATGCTaGTTAGATTTCCACAGGTCGGACGCCTGTGAGGTTAAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: PAPGGLRCCLCFPLC*LDFHRSDACEVKKE
Trigger: CTCCTTCTTAACCTCACAGGCGTCCGACCTGTGGAAATCTAACAAGCATAGGGGAAAGCAAAGGCAGCATCTTAGCCCTCCCGGAGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527854.1
CDS TCA 72 bp GCCCGCAAAAGAGATATCACGGAGCTGGCCGCTTTGTaGGGACAAACTGGGATTGGGCCTCTTTCCTATGGG +
Preference number: 6 (lower is better)
Translates to: ARKRDITELAAL*GQTGIGPLSYG
Trigger: CCCATAGGAAAGAGGCCCAATCCCAGTTTGTCCTCACAAAGCGGCCAGCTCCGTGATATCTCTTTTGCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS CAA 72 bp GGATTGGAACTCCTCCTATCCCACCCAGAGTACTTTTaGATGCTGGGGCACCAGGGCCAACCCACACTCATG +
Preference number: 6 (lower is better)
Translates to: GLELLLSHPEYF*MLGHQGQPTLM
Trigger: CATGAGTGTGGGTTGGCCCTGGTGCCCCAGCATCAAAAAGTACTCTGGGTGGGATAGGAGGAGTTCCAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS GCA 72 bp TGGCCTCTCAGAAATATCCGAACGGGTTGTCTCGTCTaGTTCCTGGACACTTGTGGGACTAGAGAGGGCATC +
Preference number: 6 (lower is better)
Translates to: WPLRNIRTGCLV*FLDTCGTREGI
Trigger: GATGCCCTCTCTAGTCCCACAAGTGTCCAGGAAGCAGACGAGACAACCCGTTCGGATATTTCTGAGAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000648610.2
CDS GCA 72 bp AAAATAGGCGGGATCTTTGATCACCTCGCCCCATCTTaGAATCGCGGTGCTCCCACACTCAGCTCAAGGCAA +
Preference number: 6 (lower is better)
Translates to: KIGGIFDHLAPS*NRGAPTLSSRQ
Trigger: TTGCCTTGAGCTGAGTGTGGGAGCACCGCGATTGCAAGATGGGGCGAGGTGATCAAAGATCCCGCCTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528271.1
ENST00000529600.1
CDS CCA 72 bp CCCAACTCAGTTTCCCACATCCCCTTCTACCTGTGTTaGTGGCAGTGTCAGAGTGACGTGGTAGGTCTCCAT +
Preference number: 6 (lower is better)
Translates to: PNSVSHIPFYLC*WQCQSDVVGLH
Trigger: ATGGAGACCTACCACGTCACTCTGACACTGCCACCAACACAGGTAGAAGGGGATGTGGGAAACTGAGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS CCA 72 bp CCTGTCTCTGCCTCAAGCTTGTCATTGACCCAGGGGTaGGGGCTGTATCTTGGTCAAGTCTGTATCCCTAAG +
Preference number: 6 (lower is better)
Translates to: PVSASSLSLTQG*GLYLGQVCIPK
Trigger: CTTAGGGATACAGACTTGACCAAGATACAGCCCCCACCCCTGGGTCAATGACAAGCTTGAGGCAGAGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1
CDS CCA 72 bp TCTTTACCTAATTTGCCGTCTATACGGGGCCGGGACTaGACAGTGGTGACTGTGGTGACAATGGTGCCATCG +
Preference number: 6 (lower is better)
Translates to: SLPNLPSIRGRD*TVVTVVTMVPS
Trigger: CGATGGCACCATTGTCACCACAGTCACCACTGTCCAGTCCCGGCCCCGTATAGACGGCAAATTAGGTAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1
CDS CCA 72 bp CACGGAGCTGGCCGCTTTGTGAGGACAAACTGGGATTaGGCCTCTTTCCTATGGGAAGACAAAAGCTACCAG +
Preference number: 6 (lower is better)
Translates to: HGAGRFVRTNWD*ASFLWEDKSYQ
Trigger: CTGGTAGCTTTTGTCTTCCCATAGGAAAGAGGCCCAATCCCAGTTTGTCCTCACAAAGCGGCCAGCTCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS CAA 72 bp AGAGAGCTGGCAACGCAGCACCATGGTATGCTCAGATaGGTCTACGCAGGTCACATGACTGATGCTGGCTCT +
Preference number: 6 (lower is better)
Translates to: RELATQHHGMLR*VYAGHMTDAGS
Trigger: AGAGCCAGCATCAGTCATGTGACCTGCGTAGACCAATCTGAGCATACCATGGTGCTGCGTTGCCAGCTCTCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000529874.5
ENST00000648610.2
CDS CAA 72 bp GATATGAGCAGCCCCTCACCAGGGATTTCCTCCAGGTaGACTTCCAACTGTGTTGGTGGCAGTGTCAGAGTG +
Preference number: 6 (lower is better)
Translates to: DMSSPSPGISSR*TSNCVGGSVRV
Trigger: CACTCTGACACTGCCACCAACACAGTTGGAAGTCAACCTGGAGGAAATCCCTGGTGAGGGGCTGCTCATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000529874.5
ENST00000648610.2
CDS CAA 72 bp GTTGCTTCAGAGTGGCCCCCACCCCTACTGTCTTTGTaGAGATGCAGACTTTGGGTGACTCAGAGGGCAAGA +
Preference number: 6 (lower is better)
Translates to: VASEWPPPLLSL*RCRLWVTQRAR
Trigger: TCTTGCCCTCTGAGTCACCCAAAGTCTGCATCTCAACAAAGACAGTAGGGGTGGGGGCCACTCTGAAGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS CAA 90 bp AAGGCCCAGGATATGAGCAGCCCCTCACCAGGGATTTCCTCCAGGTaGACTTCCAACTACAGACAGGAACAAAGTGACTGGGCTGACTTG +
Preference number: 6 (lower is better)
Translates to: KAQDMSSPSPGISSR*TSNYRQEQSDWADL
Trigger: CAAGTCAGCCCAGTCACTTTGTTCCTGTCTGTAGTTGGAAGTCAACCTGGAGGAAATCCCTGGTGAGGGGCTGCTCATATCCTGGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS GCA 72 bp TCTCCGTGGTCCGGGTCTCTCCTAAGATGCTGCCTTTaGTTTCCCCTATGCTTGTTAGATTTCCACAGGTCG +
Preference number: 6 (lower is better)
Translates to: SPWSGSLLRCCL*FPLCLLDFHRS
Trigger: CGACCTGTGGAAATCTAACAAGCATAGGGGAAAGCAAAGGCAGCATCTTAGGAGAGACCCGGACCACGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529885.1
CDS GCA 72 bp TCCCAAGAGAAAGGGACAGGGCCTGAGTGGAAACCATaGTTCTCAGCTATGCATTCAAATCCTCCCTGGTCC +
Preference number: 6 (lower is better)
Translates to: SQEKGTGPEWKP*FSAMHSNPPWS
Trigger: GGACCAGGGAGGATTTGAATGCATAGCTGAGAAGCATGGTTTCCACTCAGGCCCTGTCCCTTTCTCTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1
CDS CCA 72 bp ACCAGGGATTTCCTCCAGGTTGACTTCCAACTGTGTTaGTGGCAGTGTCAGAGTGACGTGGTAGGTCTCCAT +
Preference number: 6 (lower is better)
Translates to: TRDFLQVDFQLC*WQCQSDVVGLH
Trigger: ATGGAGACCTACCACGTCACTCTGACACTGCCACCAACACAGTTGGAAGTCAACCTGGAGGAAATCCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336702.7
ENST00000529874.5
ENST00000648610.2
CDS CCA 72 bp TCAGAAATATCCGAACGGGTTGTCTCGTCTGCTTCCTaGACACTTGTGGGACTAGAGAGGGCATCTAGCGGT +
Preference number: 6 (lower is better)
Translates to: SEISERVVSSAS*TLVGLERASSG
Trigger: ACCGCTAGATGCCCTCTCTAGTCCCACAAGTGTCCAGGAAGCAGACGAGACAACCCGTTCGGATATTTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000648610.2
CDS CCA 72 bp AACTCAGTTTCCCACATCCCCTTCTACCTGTGTTGGTaGCAGTGTCAGAGTGACGTGGTAGGTCTCCATGGA +
Preference number: 6 (lower is better)
Translates to: NSVSHIPFYLCW*QCQSDVVGLHG
Trigger: TCCATGGAGACCTACCACGTCACTCTGACACTGCCACCAACACAGGTAGAAGGGGATGTGGGAAACTGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS CCA 72 bp ATCTTAACTCTGCCCGCAAAAGAGATATCACGGAGCTaGCCGCTTTGTGAGGACAAACTGGGATTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: ILTLPAKEISRS*PLCEDKLGLGL
Trigger: GAGGCCCAATCCCAGTTTGTCCTCACAAAGCGGCCAGCTCCGTGATATCTCTTTTGCGGGCAGAGTTAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS CAA 72 bp GGAGGGCTAAGATGCTGCCTTTGCTTTCCCCTATGCTaGTTAGATTTCCACAGGTCGGACGCCTGTGAGGTT +
Preference number: 6 (lower is better)
Translates to: GGLRCCLCFPLC*LDFHRSDACEV
Trigger: AACCTCACAGGCGTCCGACCTGTGGAAATCTAACAAGCATAGGGGAAAGCAAAGGCAGCATCTTAGCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527854.1
CDS CAA 72 bp TCACGGAGCTGGCCGCTTTGTGAGGACAAACTGGGATaGGGCCTCTTTCCTATGGGAAGACAAAAGCTACCA +
Preference number: 6 (lower is better)
Translates to: SRSWPLCEDKLG*GLFPMGRQKLP
Trigger: TGGTAGCTTTTGTCTTCCCATAGGAAAGAGGCCCAATCCCAGTTTGTCCTCACAAAGCGGCCAGCTCCGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS CAA 90 bp TGGTCCGGGTCTCTCCTAAGATGCTGCCTTTGCTTTCCCCTATGCTaGTTAGATTTCCACAGGTCGGACGCCTGTGAGGTTAAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: WSGSLLRCCLCFPLC*LDFHRSDACEVKKE
Trigger: CTCCTTCTTAACCTCACAGGCGTCCGACCTGTGGAAATCTAACAAGCATAGGGGAAAGCAAAGGCAGCATCTTAGGAGAGACCCGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529885.1
CDS CAA 90 bp TCTCAGCTATGCATTCAAATCCTCCCTGGTCCTGCTCTTCCTGTCTaGCCAGTCTCTCAGTTGCAAGCCACCCTCTTTCATTTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: SQLCIQILPGPALPV*PVSQLQATLFHLLQ
Trigger: CTGGAGCAAATGAAAGAGGGTGGCTTGCAACTGAGAGACTGGCAAGACAGGAAGAGCAGGACCAGGGAGGATTTGAATGCATAGCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1
CDS GCA 72 bp TGCCAGTCTCTCAGTTGCAAGCCACCCTCTTTCATTTaGTCCAGCTCTTCCCTCTGCCGAGAATACTTTCAC +
Preference number: 6 (lower is better)
Translates to: CQSLSCKPPSFI*SSSSLCREYFH
Trigger: GTGAAAGTATTCTCGGCAGAGGGAAGAGCTGGAGCAAATGAAAGAGGGTGGCTTGCAACTGAGAGACTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1
CDS GCA 72 bp TCAGAGTGGCCCCCACCCCTACTGTCTTTGTTGAGATaGAGACTTTGGGTGACTCAGAGGGCAAGAATGATT +
Preference number: 6 (lower is better)
Translates to: SEWPPPLLSLLR*RLWVTQRARMI
Trigger: AATCATTCTTGCCCTCTGAGTCACCCAAAGTCTGCATCTCAACAAAGACAGTAGGGGTGGGGGCCACTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS CCA 72 bp AGTGGACCCCGTTTCCGACTCAATATCATCCACAGATaGCCTCTCAGAAATATCCGAACGGGTTGTCTCGTC +
Preference number: 6 (lower is better)
Translates to: SGPRFRLNIIHR*PLRNIRTGCLV
Trigger: GACGAGACAACCCGTTCGGATATTTCTGAGAGGCCATCTGTGGATGATATTGAGTCGGAAACGGGGTCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000528586.2
ENST00000648610.2
CDS CAA 72 bp ATCCTTGATCAGTTCCTCAATTGTGGAGAGCTCCACTaGTTCTTCACCTCTCTCCCTGGCCTGAAGCTTGGG +
Preference number: 6 (lower is better)
Translates to: ILDQFLNCGELH*FFTSLPGLKLG
Trigger: CCCAAGCTTCAGGCCAGGGAGAGAGGTGAAGAACAAGTGGAGCTCTCCACAATTGAGGAACTGATCAAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336702.7
ENST00000525598.1
ENST00000529874.5
ENST00000648610.2
CDS CAA 72 bp GATATGAGCAGCCCCTCACCAGGGATTTCCTCCAGGTaGACTTCCAACTACAGACAGGAACAAAGTGACTGG +
Preference number: 6 (lower is better)
Translates to: DMSSPSPGISSR*TSNYRQEQSDW
Trigger: CCAGTCACTTTGTTCCTGTCTGTAGTTGGAAGTCAACCTGGAGGAAATCCCTGGTGAGGGGCTGCTCATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS CAA 72 bp TCTTTATGTACACCTGTCTCTGCCTCAAGCTTGTCATaGACCCAGGGGTGGGGGCTGTATCTTGGTCAAGTC +
Preference number: 6 (lower is better)
Translates to: SLCTPVSASSLS*TQGWGLYLGQV
Trigger: GACTTGACCAAGATACAGCCCCCACCCCTGGGTCAATGACAAGCTTGAGGCAGAGACAGGTGTACATAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1
CDS CAA 72 bp CCATCTTCTTTATGTACACCTGTCTCTGCCTCAAGCTaGTCATTGACCCAGGGGTGGGGGCTGTATCTTGGT +
Preference number: 6 (lower is better)
Translates to: PSSLCTPVSASS*SLTQGWGLYLG
Trigger: ACCAAGATACAGCCCCCACCCCTGGGTCAATGACAAGCTTGAGGCAGAGACAGGTGTACATAAAGAAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1
CDS CAA 72 bp TGCATTCAAATCCTCCCTGGTCCTGCTCTTCCTGTCTaGCCAGTCTCTCAGTTGCAAGCCACCCTCTTTCAT +
Preference number: 6 (lower is better)
Translates to: CIQILPGPALPV*PVSQLQATLFH
Trigger: ATGAAAGAGGGTGGCTTGCAACTGAGAGACTGGCAAGACAGGAAGAGCAGGACCAGGGAGGATTTGAATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1
CDS CCA 72 bp CTAGGGGTGCAGAGAATGAATAACCTGACTTCTCCCTaGCTCTTTCTTGGATTGGAACTCCTCCTATCCCAC +
Preference number: 6 (lower is better)
Translates to: LGVQRMNNLTSP*LFLGLELLLSH
Trigger: GTGGGATAGGAGGAGTTCCAATCCAAGAAAGAGCCAGGGAGAAGTCAGGTTATTCATTCTCTGCACCCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS CAA 72 bp TCTCTCCTAAGATGCTGCCTTTGCTTTCCCCTATGCTaGTTAGATTTCCACAGGTCGGACGCCTGTGAGGTT +
Preference number: 6 (lower is better)
Translates to: SLLRCCLCFPLC*LDFHRSDACEV
Trigger: AACCTCACAGGCGTCCGACCTGTGGAAATCTAACAAGCATAGGGGAAAGCAAAGGCAGCATCTTAGGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529885.1
CDS CAA 72 bp ACTTACCTAAGATGCTGCCTTTGCTTTCCCCTATGCTaGTTAGATTTCCACAGGTCGGACGCCTCCTTGCTC +
Preference number: 6 (lower is better)
Translates to: TYLRCCLCFPLC*LDFHRSDASLL
Trigger: GAGCAAGGAGGCGTCCGACCTGTGGAAATCTAACAAGCATAGGGGAAAGCAAAGGCAGCATCTTAGGTAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528271.1
CDS CAA 90 bp GTGCAGAGAATGAATAACCTGACTTCTCCCTGGCTCTTTCTTGGATaGGAACTCCTCCTATCCCACCCAGAGTACTTTTTGATGCTGGGG +
Preference number: 6 (lower is better)
Translates to: VQRMNNLTSPWLFLG*ELLLSHPEYFLMLG
Trigger: CCCCAGCATCAAAAAGTACTCTGGGTGGGATAGGAGGAGTTCCAATCCAAGAAAGAGCCAGGGAGAAGTCAGGTTATTCATTCTCTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS CAA 90 bp AAAGAGATATCACGGAGCTGGCCGCTTTGTGAGGACAAACTGGGATaGGGCCTCTTTCCTATGGGAAGACAAAAGCTACCAGAAGGTACT +
Preference number: 6 (lower is better)
Translates to: KEISRSWPLCEDKLG*GLFPMGRQKLPEGT
Trigger: AGTACCTTCTGGTAGCTTTTGTCTTCCCATAGGAAAGAGGCCCAATCCCAGTTTGTCCTCACAAAGCGGCCAGCTCCGTGATATCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS TCA 72 bp TGGGAGGAAGATGTGGTAGGACTGGAATGGAATGTCTaGAAACAGGGGGAGTTGGAATTAAGGCTCTCTCCT +
Preference number: 6 (lower is better)
Translates to: WEEDVVGLEWNV*KQGELELRLSP
Trigger: AGGAGAGAGCCTTAATTCCAACTCCCCCTGTTTTCAGACATTCCATTCCAGTCCTACCACATCTTCCTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1
CDS GCA 72 bp AAGCCACCCTCTTTCATTTGCTCCAGCTCTTCCCTCTaGCGAGAATACTTTCACACTCTGATGAAATCCTAC +
Preference number: 6 (lower is better)
Translates to: KPPSFICSSSSL*REYFHTLMKSY
Trigger: GTAGGATTTCATCAGAGTGTGAAAGTATTCTCGGCAGAGGGAAGAGCTGGAGCAAATGAAAGAGGGTGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1
CDS GCA 72 bp GTTAGAAGAACTACCACCACTGGTCACTGCCTGTCTTaGTGCCAGATGGATAATCCAAGGGTAGGATTTCTT +
Preference number: 6 (lower is better)
Translates to: VRRTTTTGHCLS*CQMDNPRVGFL
Trigger: AAGAAATCCTACCCTTGGATTATCCATCTGGCAGCAAGACAGGCAGTGACCAGTGGTGGTAGTTCTTCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS CAA 72 bp TGTGCTTTATCCTTCCTGAGGCAAAAATCGTGGTACTaGTGGGGATCTGTGTACAATCTTAACTCTGCCCGC +
Preference number: 6 (lower is better)
Translates to: CALSFLRQKSWY*WGSVYNLNSAR
Trigger: GCGGGCAGAGTTAAGATTGTACACAGATCCCCACAAGTACCACGATTTTTGCCTCAGGAAGGATAAAGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS TCA 72 bp CTTTGGGTGACTCAGAGGGCAAGAATGATTAAAGGGTaGTTAATCACAAGGGTGATTAGGAAGATGCCGTGG +
Preference number: 6 (lower is better)
Translates to: LWVTQRARMIKG*LITRVIRKMPW
Trigger: CCACGGCATCTTCCTAATCACCCTTGTGATTAATCACCCTTTAATCATTCTTGCCCTCTGAGTCACCCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS CCA 72 bp TTTGTGAGGACAAACTGGGATTGGGCCTCTTTCCTATaGGAAGACAAAAGCTACCAGAAGGTACTCCCAAAA +
Preference number: 6 (lower is better)
Translates to: FVRTNWDWASFL*EDKSYQKVLPK
Trigger: TTTTGGGAGTACCTTCTGGTAGCTTTTGTCTTCCCATAGGAAAGAGGCCCAATCCCAGTTTGTCCTCACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS CCA 72 bp GCTTTATCCTTCCTGAGGCAAAAATCGTGGTACTTGTaGGGATCTGTGTACAATCTTAACTCTGCCCGCAAA +
Preference number: 6 (lower is better)
Translates to: ALSFLRQKSWYL*GSVYNLNSARK
Trigger: TTTGCGGGCAGAGTTAAGATTGTACACAGATCCCCACAAGTACCACGATTTTTGCCTCAGGAAGGATAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS CAA 72 bp ATGAATAACCTGACTTCTCCCTGGCTCTTTCTTGGATaGGAACTCCTCCTATCCCACCCAGAGTACTTTTTG +
Preference number: 6 (lower is better)
Translates to: MNNLTSPWLFLG*ELLLSHPEYFL
Trigger: CAAAAAGTACTCTGGGTGGGATAGGAGGAGTTCCAATCCAAGAAAGAGCCAGGGAGAAGTCAGGTTATTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS CAA 72 bp ACCAGTATAATGAGCAAGGTGCTCACCCAGCAGGCTTaGGAGGTAGAAACCTCATTATCTCAAGAAGTGATG +
Preference number: 6 (lower is better)
Translates to: TSIMSKVLTQQA*EVETSLSQEVM
Trigger: CATCACTTCTTGAGATAATGAGGTTTCTACCTCCAAAGCCTGCTGGGTGAGCACCTTGCTCATTATACTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS GCA 72 bp GCTCAAGGCAAGAGTAACTTCACTTACCTAAGATGCTaGCTTTGCTTTCCCCTATGCTTGTTAGATTTCCAC +
Preference number: 6 (lower is better)
Translates to: AQGKSNFTYLRC*LCFPLCLLDFH
Trigger: GTGGAAATCTAACAAGCATAGGGGAAAGCAAAGGCAGCATCTTAGGTAAGTGAAGTTACTCTTGCCTTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528271.1
ENST00000529600.1
CDS GCA 72 bp TCTTTTAAAGTTAGAAGAACTACCACCACTGGTCACTaGCTGTCTTGCTGCCAGATGGATAATCCAAGGGTA +
Preference number: 6 (lower is better)
Translates to: SFKVRRTTTTGH*LSCCQMDNPRV
Trigger: TACCCTTGGATTATCCATCTGGCAGCAAGACAGGCAGTGACCAGTGGTGGTAGTTCTTCTAACTTTAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS CCA 72 bp CTAGGCACTCTGACGGCACATTACATAAACCTCAACTaGAGCGGTTTTACCATCTTCTTTATGTACACCTGT +
Preference number: 6 (lower is better)
Translates to: LGTLTAHYINLN*SGFTIFFMYTC
Trigger: ACAGGTGTACATAAAGAAGATGGTAAAACCGCTCCAGTTGAGGTTTATGTAATGTGCCGTCAGAGTGCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1
CDS TCA 72 bp ATAGATCCATGGTTGATAGTCTCACTGGTAGAGGAATaGAGATGTTTTAGGGTGAGCCTCTCATCTTTTAAA +
Preference number: 6 (lower is better)
Translates to: IDPWLIVSLVEE*RCFRVSLSSFK
Trigger: TTTAAAAGATGAGAGGCTCACCCTAAAACATCTTCATTCCTCTACCAGTGAGACTATCAACCATGGATCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525598.1
CDS GCA 72 bp CGAGAATACTTTCACACTCTGATGAAATCCTACTCTTaGTCTAAAGTGTGGTTTAAATGTCATCTCCTCCAT +
Preference number: 6 (lower is better)
Translates to: REYFHTLMKSYS*SKVWFKCHLLH
Trigger: ATGGAGGAGATGACATTTAAACCACACTTTAGAGCAAGAGTAGGATTTCATCAGAGTGTGAAAGTATTCTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525598.1
ENST00000533458.1