RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C2CD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000157617

Ensembl transcript IDs: ENST00000329623.11, ENST00000380486.4, ENST00000449165.5, ENST00000467074.6, ENST00000478372.1, ENST00000482084.5, ENST00000482186.5, ENST00000490479.1

Found 705 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGCAAGACAAGCGGGGCATCTGGACATCCGGCGGACACACTGGCTaGGTCCTGGTGAGGGTAGTTAACATGGGTGCACGTCTTCTGGCT +
Preference number: 1 (lower is better)
Translates to: QQDKRGIWTSGGHTG*VLVRVVNMGARLLA
Trigger: AGCCAGAAGACGTGCACCCATGTTAACTACCCTCACCAGGACGCAGCCAGTGTGTCCGCCGGATGTCCAGATGCCCCGCTTGTCTTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR GCA 90 bp ACCCAAGTTAACCTGAGTTTGCTCTGCAGGATTCCGCGGGGGCCTTaGCCTGTGCAGGCTGCTTTGGTCTTCGTGTCTAGGCCGGTTTGG +
Preference number: 1 (lower is better)
Translates to: TQVNLSLLCRIPRGP*PVQAALVFVSRPVW
Trigger: CCAAACCGGCCTAGACACGAAGACCAAAGCAGCCTGCACAGGGCAAGGCCCCCGCGGAATCCTGCAGAGCAAACTCAGGTTAACTTGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CCA 90 bp ATGACGAGATGGTTGGAAGAAACCCAGCAAGACAAGCGGGGCATCTaGACATCCGGCGGACACACTGGCTGCGTCCTGGTGAGGGTAGTT +
Preference number: 1 (lower is better)
Translates to: MTRWLEETQQDKRGI*TSGGHTGCVLVRVV
Trigger: AACTACCCTCACCAGGACGCAGCCAGTGTGTCCGCCGGATGTCCAGATGCCCCGCTTGTCTTGCTGGGTTTCTTCCAACCATCTCGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR GCA 90 bp TTCGAATGCAAACGGTCATGGACCCAAGTTAACCTGAGTTTGCTCTaGAGGATTCCGCGGGGGCCTTGCCCTGTGCAGGCTGCTTTGGTC +
Preference number: 1 (lower is better)
Translates to: FECKRSWTQVNLSLL*RIPRGPCPVQAALV
Trigger: GACCAAAGCAGCCTGCACAGGGCAAGGCCCCCGCGGAATCCTGCAGAGCAAACTCAGGTTAACTTGGGTCCATGACCGTTTGCATTCGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR TCA 90 bp GTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTAACCTaGGTTTGCTCTGCAGGATTCCGCGGGGGCCTTGCCCTGTGCAGG +
Preference number: 1 (lower is better)
Translates to: VYCVSNANGHGPKLT*VCSAGFRGGLALCR
Trigger: CCTGCACAGGGCAAGGCCCCCGCGGAATCCTGCAGAGCAAACTCAGGTTAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR TCA 90 bp CCAGTAAAACCCAAGCAAAAATCTAAACGGGCACCAGGTGGCCACTaGGTGGCGACTGGTCGAGTAGCAGTTGGTCATAAGGGATCAGGG +
Preference number: 1 (lower is better)
Translates to: PVKPKQKSKRAPGGH*VATGRVAVGHKGSG
Trigger: CCCTGATCCCTTATGACCAACTGCTACTCGACCAGTCGCCACTCAGTGGCCACCTGGTGCCCGTTTAGATTTTTGCTTGGGTTTTACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CCA 90 bp CTGAGAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATaGACCCAAGTTAACCTGAGTTTGCTCTGCAGGATTCCGCGGGGG +
Preference number: 1 (lower is better)
Translates to: LRERGSVLCFECKRS*TQVNLSLLCRIPRG
Trigger: CCCCCGCGGAATCCTGCAGAGCAAACTCAGGTTAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR TCA 90 bp GGGCACCCCAACCTGTGTCCAAGAGGACTGTTCACAGCAAAATTCTaGAGCGCTCATAGAAGGAATGTCCTGCGAGTTTGGCCCATTTGT +
Preference number: 1 (lower is better)
Translates to: GHPNLCPRGLFTAKF*SAHRRNVLRVWPIC
Trigger: ACAAATGGGCCAAACTCGCAGGACATTCCTTCTATGAGCGCTTCAGAATTTTGCTGTGAACAGTCCTCTTGGACACAGGTTGGGGTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CCA 90 bp ATCCATGTATGTGTTTGGTTACTGTGTTCTACGAGCGGTCACGTATaGCTCCTGACTTCATCTGACAGGCCCGCTGTGCTCTTGTTTAGC +
Preference number: 1 (lower is better)
Translates to: IHVCVWLLCSTSGHV*LLTSSDRPAVLLFS
Trigger: GCTAAACAAGAGCACAGCGGGCCTGTCAGATGAAGTCAGGAGCCATACGTGACCGCTCGTAGAACACAGTAACCAAACACATACATGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CCA 90 bp TGGAGACAACGTGTGCGTGTCTACAGGAAGCAGAGCCCTAGACCTTaGTATTCAACAGTAAGCAGCGCTCATGGGATTCATCTGGAAATG +
Preference number: 1 (lower is better)
Translates to: WRQRVRVYRKQSPRP*YSTVSSAHGIHLEM
Trigger: CATTTCCAGATGAATCCCATGAGCGCTGCTTACTGTTGAATACCAAGGTCTAGGGCTCTGCTTCCTGTAGACACGCACACGTTGTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CCA 90 bp GTTCATCACCGCACTCCAGCGTCAGGCCAAACCTTTCCGTGGACCTaGAAAACCTGCCACTTTCTTCTCTTTTTACAATGCAGTTTCGAC +
Preference number: 1 (lower is better)
Translates to: VHHRTPASGQTFPWT*KTCHFLLFLQCSFD
Trigger: GTCGAAACTGCATTGTAAAAAGAGAAGAAAGTGGCAGGTTTTCCAGGTCCACGGAAAGGTTTGGCCTGACGCTGGAGTGCGGTGATGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR TCA 90 bp TATGTGTTTGGTTACTGTGTTCTACGAGCGGTCACGTATGGCTCCTaGCTTCATCTGACAGGCCCGCTGTGCTCTTGTTTAGCAAGTATG +
Preference number: 1 (lower is better)
Translates to: YVFGYCVLRAVTYGS*LHLTGPLCSCLASM
Trigger: CATACTTGCTAAACAAGAGCACAGCGGGCCTGTCAGATGAAGTCAGGAGCCATACGTGACCGCTCGTAGAACACAGTAACCAAACACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR GCA 90 bp CGCACTCCAGCGTCAGGCCAAACCTTTCCGTGGACCTGGAAAACCTaGCACTTTCTTCTCTTTTTACAATGCAGTTTCGACATAACATTG +
Preference number: 1 (lower is better)
Translates to: RTPASGQTFPWTWKT*HFLLFLQCSFDITL
Trigger: CAATGTTATGTCGAAACTGCATTGTAAAAAGAGAAGAAAGTGGCAGGTTTTCCAGGTCCACGGAAAGGTTTGGCCTGACGCTGGAGTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR TCA 90 bp ACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATTTGTACTCTaGAGTTTCCAGATCAAGAGCCGTGAGATTACTACCCAGGAAACA +
Preference number: 1 (lower is better)
Translates to: TEIRVLPSTIHQFVL*SFQIKSREITTQET
Trigger: TGTTTCCTGGGTAGTAATCTCACGGCTCTTGATCTGGAAACTTCAGAGTACAAATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR GCA 90 bp TGGAAAACAAACATTCACAGTATCAATACAGCCCATTTCTCACGGTaGTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCA +
Preference number: 1 (lower is better)
Translates to: WKTNIHSINTAHFSR*YPEASRRVAFAFAS
Trigger: TGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACCGTGAGAAATGGGCTGTATTGATACTGTGAATGTTTGTTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CCA 90 bp TTGTTTTGGCTACTGGCAGCACTTGGCAAAATCCATGTATGTGTTTaGTTACTGTGTTCTACGAGCGGTCACGTATGGCTCCTGACTTCA +
Preference number: 1 (lower is better)
Translates to: LFWLLAALGKIHVCV*LLCSTSGHVWLLTS
Trigger: TGAAGTCAGGAGCCATACGTGACCGCTCGTAGAACACAGTAACCAAACACATACATGGATTTTGCCAAGTGCTGCCAGTAGCCAAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR TCA 90 bp ATATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTaGCCAGCATGTCTACTGGAAGTGGCACATTCAGAAGTGAGATCT +
Preference number: 1 (lower is better)
Translates to: ILNCQEHFTPMMTAL*PACLLEVAHSEVRS
Trigger: AGATCTCACTTCTGAATGTGCCACTTCCAGTAGACATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR GCA 90 bp GACTGTTCACAGCAAAATTCTGAAGCGCTCATAGAAGGAATGTCCTaGGAGTTTGGCCCATTTGTTATTAAACTTCCATTCCTAAGACTG +
Preference number: 1 (lower is better)
Translates to: DCSQQNSEALIEGMS*EFGPFVIKLPFLRL
Trigger: CAGTCTTAGGAATGGAAGTTTAATAACAAATGGGCCAAACTCGCAGGACATTCCTTCTATGAGCGCTTCAGAATTTTGCTGTGAACAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR GCA 90 bp GATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTaGCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAACAAGGG +
Preference number: 1 (lower is better)
Translates to: DEESDWNDIRDIQMV*QVCDVFHQNKPKQG
Trigger: CCCTTGTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR GCA 90 bp GTGAATCATATTAAACTGTCAAGAACACTTCACCCCAATGATGACTaGTCTTTGACCAGCATGTCTACTGGAAGTGGCACATTCAGAAGT +
Preference number: 1 (lower is better)
Translates to: VNHIKLSRTLHPNDD*SLTSMSTGSGTFRS
Trigger: ACTTCTGAATGTGCCACTTCCAGTAGACATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAATATGATTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR TCA 90 bp AAACAAAGCAAACGGGGAAGGGTTGCAAGCTCATTAAAACCAACATaGGCACCCAGTTCCAGAGATACAGACACAATTAATCTTAGTGTT +
Preference number: 1 (lower is better)
Translates to: KQSKRGRVASSLKPT*APSSRDTDTINLSV
Trigger: AACACTAAGATTAATTGTGTCTGTATCTCTGGAACTGGGTGCTCATGTTGGTTTTAATGAGCTTGCAACCCTTCCCCGTTTGCTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CCA 90 bp CAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATaGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAAC +
Preference number: 1 (lower is better)
Translates to: QLMRKATGMILGIFK*CARFVMFSTKTNPN
Trigger: GTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGGGCAGGAGAATCGCTTaGACCAGGAGGTGGAGGTTG +
Preference number: 2 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTGRRIA*TRRWRL
Trigger: CAACCTCCACCTCCTGGTTCAAGCGATTCTCCTGCC...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGGGCACCTCCTTTTTGTaGCATGGTCCAGGCATGGAC +
Preference number: 2 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTGTSFL*HGPGMD
Trigger: GTCCATGCCTGGACCATGTCACAAAAAGGAGGTGCC...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGGACAAGCGGGGCATCTaGACATCCGGCGGACACACT +
Preference number: 2 (lower is better)
Translates to: IKSREITTQETPAFGGQQDKRGI*TSGGHT
Trigger: AGTGTGTCCGCCGGATGTCCAGATGCCCCGCTTGTC...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CAA 90 bp TTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTAACCTGAGTTaGCTCTGCAGGATTCCGCGGGGGCCTTGCCCTGTGCAGGCTGCT +
Preference number: 2 (lower is better)
Translates to: LCFECKRSWTQVNLS*LCRIPRGPCPVQAA
Trigger: AGCAGCCTGCACAGGGCAAGGCCCCCGCGGAATCCTGCAGAGCAAACTCAGGTTAACTTGGGTCCATGACCGTTTGCATTCGAAACACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR GCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGGATGGAGACAACGTGTaGGTGTCTACAGGAAGCAGA +
Preference number: 2 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTDGDNV*VSTGSR
Trigger: TCTGCTTCCTGTAGACACGCACACGTTGTCTCCATC...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp GGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCGACAAGCGGGGCATCTaGACATCCGGCGGACACACT +
Preference number: 2 (lower is better)
Translates to: GATLKLADVLPLPLLHKLDKRGI*TSGGHT
Trigger: AGTGTGTCCGCCGGATGTCCAGATGCCCCGCTTGTC...GAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGCCACTGAGTGGCGACTaGTCGAGTAGCAGTTGGTCA +
Preference number: 2 (lower is better)
Translates to: IKSREITTQETPAFGGQQPLSGD*SSSSWS
Trigger: TGACCAACTGCTACTCGACCAGTCGCCACTCAGTGG...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR GCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCACCAGGAGGTGGAGGTTaGAGTAAGCTGCCATTGCAC +
Preference number: 2 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPPGGGG*SKLPLH
Trigger: GTGCAATGGCAGCTTACTGCAACCTCCACCTCCTGG...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR GCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAGCCCATTTCTCACGGTaGTACCCTGAAGCTAGCCGA +
Preference number: 2 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPAHFSR*YPEASR
Trigger: TCGGCTAGCTTCAGGGTAGCACCGTGAGAAATGGGC...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAATCCGGCGGACACACTaGCTGCGTCCTGGTGAGGGT +
Preference number: 2 (lower is better)
Translates to: STKNRGTSLNKANGEGLQIRRTH*LRPGEG
Trigger: ACCCTCACCAGGACGCAGCCAGTGTGTCCGCCGGAT...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGCTGGGAGAAGCCTCCTaGCTGGAGACTCAGATTTTG +
Preference number: 2 (lower is better)
Translates to: IKSREITTQETPAFGGQQLGEAS*LETQIL
Trigger: CAAAATCTGAGTCTCCAGCCAGGAGGCTTCTCCCAG...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTAGTGTCTAGGCCGGTTTaGGGCAGTGGGGAGAGGGCC +
Preference number: 2 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLVSRPV*GSGERA
Trigger: GGCCCTCTCCCCACTGCCCCAAACCGGCCTAGACAC...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGGCAGATGAAGAGAGGTaGCCCATCCTTTCCATTCAC +
Preference number: 2 (lower is better)
Translates to: IKSREITTQETPAFGGQQADEER*PILSIH
Trigger: GTGAATGGAAAGGATGGGTCACCTCTCTTCATCTGC...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCGTCACGTATGGCTCCTaGCTTCATCTGACAGGCCCG +
Preference number: 2 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASVTYGS*LHLTGP
Trigger: CGGGCCTGTCAGATGAAGTCAGGAGCCATACGTGAC...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGATGATGACTGCTCTTTaGCCAGCATGTCTACTGGAA +
Preference number: 2 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTMMTAL*PACLLE
Trigger: TTCCAGTAGACATGCTGGTCAAAGAGCAGTCATCAT...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR GCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATGCCCATTTCTCACGGTaGTACCCTGAAGCTAGCCGA +
Preference number: 2 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNAHFSR*YPEASR
Trigger: TCGGCTAGCTTCAGGGTAGCACCGTGAGAAATGGGC...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTAATCCGGCGGACACACTaGCTGCGTCCTGGTGAGGGT +
Preference number: 2 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLIRRTH*LRPGEG
Trigger: ACCCTCACCAGGACGCAGCCAGTGTGTCCGCCGGAT...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATCCACTGAGTGGCGACTaGTCGAGTAGCAGTTGGTCA +
Preference number: 2 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNPLSGD*SSSSWS
Trigger: TGACCAACTGCTACTCGACCAGTCGCCACTCAGTGG...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGTCACGTATGGCTCCTaGCTTCATCTGACAGGCCCG +
Preference number: 2 (lower is better)
Translates to: STKNRGTSLNKANGEGLQVTYGS*LHLTGP
Trigger: CGGGCCTGTCAGATGAAGTCAGGAGCCATACGTGAC...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACGACAAGCGGGGCATCTaGACATCCGGCGGACACACT +
Preference number: 2 (lower is better)
Translates to: SPQATKACRRGEAIKVIYDKRGI*TSGGHT
Trigger: AGTGTGTCCGCCGGATGTCCAGATGCCCCGCTTGTC...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGGCACCTCCTTTTTGTaGCATGGTCCAGGCATGGAC +
Preference number: 2 (lower is better)
Translates to: STKNRGTSLNKANGEGLQGTSFL*HGPGMD
Trigger: GTCCATGCCTGGACCATGTCACAAAAAGGAGGTGCC...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATATTCCAAGCAGCAGATaGAGAGAGGTGACCCATCCT +
Preference number: 2 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNIPSSR*REVTHP
Trigger: AGGATGGGTCACCTCTCTTCATCTGCTGCTTGGAAT...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACGCTCCTGACTTCATCTaGCAGGCCCGCTGTGCTCTT +
Preference number: 2 (lower is better)
Translates to: SPQATKACRRGEAIKVIYAPDFI*QARCAL
Trigger: AAGAGCACAGCGGGCCTGTCAGATGAAGTCAGGAGC...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGATGATGACTGCTCTTTaGCCAGCATGTCTACTGGAA +
Preference number: 2 (lower is better)
Translates to: IKSREITTQETPAFGGQQMMTAL*PACLLE
Trigger: TTCCAGTAGACATGCTGGTCAAAGAGCAGTCATCAT...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATCCATTTCCGTCTCCATaGCAGAAGCCAAGCTTTCGT +
Preference number: 2 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNPFPSP*QKPSFR
Trigger: ACGAAAGCTTGGCTTCTGTCATGGAGACGGAAATGG...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACGGCAGGAGAATCGCTTaGACCAGGAGGTGGAGGTTG +
Preference number: 2 (lower is better)
Translates to: SPQATKACRRGEAIKVIYGRRIA*TRRWRL
Trigger: CAACCTCCACCTCCTGGTTCAAGCGATTCTCCTGCC...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCACTCCTTTTTGTGACATaGTCCAGGCATGGACCCAAA +
Preference number: 2 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPLLFVT*SRHGPK
Trigger: TTTGGGTCCATGCCTGGACCATGTCACAAAAAGGAG...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGGCTGGAACAAGGAGATaGCTACTTTTTGTTATTGCT +
Preference number: 2 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTAGTRR*LLFVIA
Trigger: AGCAATAACAAAAAGTAGCCATCTCCTTGTTCCAGC...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CAA 90 bp CCCATTTCTCACGGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTaGCCTTTGCTTCATAAACTCCCTCCCATGTTGGTGTTTTCTGTA +
Preference number: 2 (lower is better)
Translates to: PISHGATLKLADVLP*PLLHKLPPMLVFSV
Trigger: TACAGAAAACACCAACATGGGAGGGAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACCGTGAGAAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CAA 90 bp ATACAGCCCATTTCTCACGGTGCTACCCTGAAGCTAGCCGACGTGTaGCCTTTGCCTTTGCTTCATAAACTCCCTCCCATGTTGGTGTTT +
Preference number: 2 (lower is better)
Translates to: IQPISHGATLKLADV*PLPLLHKLPPMLVF
Trigger: AAACACCAACATGGGAGGGAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACCGTGAGAAATGGGCTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAGGTGTGCCAGGTTTGTaGTGTTTTCCACCAAAACAA +
Preference number: 2 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPGVPGL*CFPPKQ
Trigger: TTGTTTTGGTGGAAAACATCACAAACCTGGCACACC...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR GCA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACCCAGGAGGTGGAGGTTaGAGTAAGCTGCCATTGCAC +
Preference number: 2 (lower is better)
Translates to: SPQATKACRRGEAIKVIYPGGGG*SKLPLH
Trigger: GTGCAATGGCAGCTTACTGCAACCTCCACCTCCTGG...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACTGGGTGCACGTCTTCTaGCTTGGAGGTGATGACCTC +
Preference number: 2 (lower is better)
Translates to: SPQATKACRRGEAIKVIYWVHVF*LGGDDL
Trigger: GAGGTCATCACCTCCAAGCCAGAAGACGTGCACCCA...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp TGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAACAAGGGCACCACGAGCGGTCACGTATaGCTCCTGACTTCATCTGAC +
Preference number: 2 (lower is better)
Translates to: WCARFVMFSTKTNPNKGTTSGHV*LLTSSD
Trigger: GTCAGATGAAGTCAGGAGCCATACGTGACCGCTCGT...GGTGCCCTTGTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGGATGAGGAAAGCGACTaGAATGATATTAGGGATATT +
Preference number: 2 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTDEESD*NDIRDI
Trigger: AATATCCCTAATATCATTCCAGTCGCTTTCCTCATC...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCGAAAAGGCCATTGGATaGAGACAACGTGTGCGTGTC +
Preference number: 2 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASEKAIG*RQRVRV
Trigger: GACACGCACACGTTGTCTCCATCCAATGGCCTTTTC...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp GGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCTTCAGAAAAGGCCATTaGATGGAGACAACGTGTGCG +
Preference number: 2 (lower is better)
Translates to: GATLKLADVLPLPLLHKLFRKGH*METTCA
Trigger: CGCACACGTTGTCTCCATCCAATGGCCTTTTCTGAA...GAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CAA 90 bp TCTCACGGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTaGCTTCATAAACTCCCTCCCATGTTGGTGTTTTCTGTAACTTCA +
Preference number: 2 (lower is better)
Translates to: SHGATLKLADVLPLP*LHKLPPMLVFSVTS
Trigger: TGAAGTTACAGAAAACACCAACATGGGAGGGAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACCGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CAA 90 bp TCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATTaGTACTCTGAAGTTTCCAGATCAAGAGCCGTGAGATTACTACCC +
Preference number: 2 (lower is better)
Translates to: SVRQRYVSCLPPSTN*YSEVSRSRAVRLLP
Trigger: GGGTAGTAATCTCACGGCTCTTGATCTGGAAACTTCAGAGTACAAATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp TGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAACAAGGGCACCGCAGATGAAGAGAGGTaGCCCATCCTTTCCATTCAC +
Preference number: 2 (lower is better)
Translates to: WCARFVMFSTKTNPNKGTADEER*PILSIH
Trigger: GTGAATGGAAAGGATGGGTCACCTCTCTTCATCTGC...GGTGCCCTTGTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGGCTCCTGACTTCATCTaGCAGGCCCGCTGTGCTCTT +
Preference number: 2 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMAPDFI*QARCAL
Trigger: AAGAGCACAGCGGGCCTGTCAGATGAAGTCAGGAGC...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp GGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCATGATGACTGCTCTTTaGCCAGCATGTCTACTGGAA +
Preference number: 2 (lower is better)
Translates to: GATLKLADVLPLPLLHKLMMTAL*PACLLE
Trigger: TTCCAGTAGACATGCTGGTCAAAGAGCAGTCATCAT...GAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp GGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCACTAACAGTGATGCCTaGCTTTGGGGACAGAAACTT +
Preference number: 2 (lower is better)
Translates to: GATLKLADVLPLPLLHKLTNSDA*LWGQKL
Trigger: AAGTTTCTGTCCCCAAAGTCAGGCATCACTGTTAGT...GAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR GCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATAGAAGGAATGTCCTaGGAGTTTGGCCCATTTGTT +
Preference number: 2 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPIEGMS*EFGPFV
Trigger: AACAAATGGGCCAAACTCGCAGGACATTCCTTCTAT...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR GCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATCAAACGGGGAAGGGTTaGAAGCTCATTAAAACCAAC +
Preference number: 2 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNQTGKG*KLIKTN
Trigger: GTTGGTTTTAATGAGCTTGCAACCCTTCCCCGTTTG...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTACTGGGAGAAGCCTCCTaGCTGGAGACTCAGATTTTG +
Preference number: 2 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLLGEAS*LETQIL
Trigger: CAAAATCTGAGTCTCCAGCCAGGAGGCTTCTCCCAG...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTAACGAGCGGTCACGTATaGCTCCTGACTTCATCTGAC +
Preference number: 2 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLTSGHV*LLTSSD
Trigger: GTCAGATGAAGTCAGGAGCCATACGTGACCGCTCGT...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACACGAGCGGTCACGTATaGCTCCTGACTTCATCTGAC +
Preference number: 2 (lower is better)
Translates to: SPQATKACRRGEAIKVIYTSGHV*LLTSSD
Trigger: GTCAGATGAAGTCAGGAGCCATACGTGACCGCTCGT...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAAAAAAGACTTTGTTTTaGCTACTGGCAGCACTTGGC +
Preference number: 2 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPKKTLF*LLAALG
Trigger: GCCAAGTGCTGCCAGTAGCCAAAACAAAGTCTTTTT...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAGTTTTTACTCACCAGTaGCTCTATTACCCCCGAAAT +
Preference number: 2 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPVFTHQ*LYYPRN
Trigger: ATTTCGGGGGTAATAGAGCCACTGGTGAGTAAAAAC...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR GCA 90 bp GGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCATAGAAGGAATGTCCTaGGAGTTTGGCCCATTTGTT +
Preference number: 2 (lower is better)
Translates to: GATLKLADVLPLPLLHKLIEGMS*EFGPFV
Trigger: AACAAATGGGCCAAACTCGCAGGACATTCCTTCTAT...GAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR GCA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGGATATTCAAATGGTGTaGCAGGTTTGTGATGTTTTC +
Preference number: 2 (lower is better)
Translates to: IKSREITTQETPAFGGQQDIQMV*QVCDVF
Trigger: GAAAACATCACAAACCTGGCACACCATTTGAATATC...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR GCA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACGATGGAGACAACGTGTaGGTGTCTACAGGAAGCAGA +
Preference number: 2 (lower is better)
Translates to: SPQATKACRRGEAIKVIYDGDNV*VSTGSR
Trigger: TCTGCTTCCTGTAGACACGCACACGTTGTCTCCATC...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCTGGGTGCACGTCTTCTaGCTTGGAGGTGATGACCTC +
Preference number: 2 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPWVHVF*LGGDDL
Trigger: GAGGTCATCACCTCCAAGCCAGAAGACGTGCACCCA...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATGTCTCATTTAGCATCTaGTGGCAAGTTGGGCTTTTT +
Preference number: 2 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNVSFSI*WQVGLF
Trigger: AAAAAGCCCAACTTGCCACCAGATGCTAAATGAGAC...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp GGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCGTTTTTACTCACCAGTaGCTCTATTACCCCCGAAAT +
Preference number: 2 (lower is better)
Translates to: GATLKLADVLPLPLLHKLVFTHQ*LYYPRN
Trigger: ATTTCGGGGGTAATAGAGCCACTGGTGAGTAAAAAC...GAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CAA 90 bp TTTGTTTTGGCTACTGGCAGCACTTGGCAAAATCCATGTATGTGTTaGGTTACTGTGTTCTACGAGCGGTCACGTATGGCTCCTGACTTC +
Preference number: 2 (lower is better)
Translates to: FVLATGSTWQNPCMC*VTVFYERSRMAPDF
Trigger: GAAGTCAGGAGCCATACGTGACCGCTCGTAGAACACAGTAACCAAACACATACATGGATTTTGCCAAGTGCTGCCAGTAGCCAAAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CAA 90 bp GCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCCCTCCCATGTaGGTGTTTTCTGTAACTTCAGAAAAGGCCATTGGATGGAGACAA +
Preference number: 2 (lower is better)
Translates to: ADVLPLPLLHKLPPM*VFSVTSEKAIGWRQ
Trigger: TTGTCTCCATCCAATGGCCTTTTCTGAAGTTACAGAAAACACCAACATGGGAGGGAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTGGCACCTCCTTTTTGTaGCATGGTCCAGGCATGGAC +
Preference number: 2 (lower is better)
Translates to: RQLMRKATGMILGIFKWCGTSFL*HGPGMD
Trigger: GTCCATGCCTGGACCATGTCACAAAAAGGAGGTGCC...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp GGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCTTCACAGCAAAATTCTaGAGCGCTCATAGAAGGAAT +
Preference number: 2 (lower is better)
Translates to: GATLKLADVLPLPLLHKLFTAKF*SAHRRN
Trigger: ATTCCTTCTATGAGCGCTTCAGAATTTTGCTGTGAA...GAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAACTAACAGTGATGCCTaGCTTTGGGGACAGAAACTT +
Preference number: 2 (lower is better)
Translates to: STKNRGTSLNKANGEGLQTNSDA*LWGQKL
Trigger: AAGTTTCTGTCCCCAAAGTCAGGCATCACTGTTAGT...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAAGTAAAACATTAAAGTaGACATCTGTCCCATCTGTC +
Preference number: 2 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPSKTLK*TSVPSV
Trigger: GACAGATGGGACAGATGTTCACTTTAATGTTTTACT...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR GCA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACCCGACGTGTTGCCTTTaGCTTTGCTTCATAAACTCC +
Preference number: 2 (lower is better)
Translates to: SPQATKACRRGEAIKVIYPTCCL*LCFINS
Trigger: GGAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGG...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACCTCCTTTTTGTGACATaGTCCAGGCATGGACCCAAA +
Preference number: 2 (lower is better)
Translates to: SPQATKACRRGEAIKVIYLLFVT*SRHGPK
Trigger: TTTGGGTCCATGCCTGGACCATGTCACAAAAAGGAG...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp TGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAACAAGGGCACCGCTACTGGCAGCACTTaGCAAAATCCATGTATGTGT +
Preference number: 2 (lower is better)
Translates to: WCARFVMFSTKTNPNKGTATGST*QNPCMC
Trigger: ACACATACATGGATTTTGCCAAGTGCTGCCAGTAGC...GGTGCCCTTGTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATTTAGGGATATTCAAATaGTGTGCCAGGTTTGTGATG +
Preference number: 2 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNLGIFK*CARFVM
Trigger: CATCACAAACCTGGCACACCATTTGAATATCCCTAA...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTATTCAGAAAAGGCCATTaGATGGAGACAACGTGTGCG +
Preference number: 2 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLFRKGH*METTCA
Trigger: CGCACACGTTGTCTCCATCCAATGGCCTTTTCTGAA...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CAA 90 bp GCGACTGGTCGAGTAGCAGTTGGTCATAAGGGATCAGGGCTGGTTTaGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAA +
Preference number: 2 (lower is better)
Translates to: ATGRVAVGHKGSGLV*NSDLKLDENKVLCQ
Trigger: TTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAAAACCAGCCCTGATCCCTTATGACCAACTGCTACTCGACCAGTCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACGCTCCTGACTTCATCTaGCAGGCCCGCTGTGCTCTT +
Preference number: 2 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHAPDFI*QARCAL
Trigger: AAGAGCACAGCGGGCCTGTCAGATGAAGTCAGGAGC...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCTTCACAGCAAAATTCTaGAGCGCTCATAGAAGGAAT +
Preference number: 2 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASFTAKF*SAHRRN
Trigger: ATTCCTTCTATGAGCGCTTCAGAATTTTGCTGTGAA...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTAGGTGTGCCAGGTTTGTaGTGTTTTCCACCAAAACAA +
Preference number: 2 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLGVPGL*CFPPKQ
Trigger: TTGTTTTGGTGGAAAACATCACAAACCTGGCACACC...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACGGCAGGAGAATCGCTTaGACCAGGAGGTGGAGGTTG +
Preference number: 2 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHGRRIA*TRRWRL
Trigger: CAACCTCCACCTCCTGGTTCAAGCGATTCTCCTGCC...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAATCATTAAAACCAACATaGGCACCCAGTTCCAGAGAT +
Preference number: 2 (lower is better)
Translates to: STKNRGTSLNKANGEGLQSLKPT*APSSRD
Trigger: ATCTCTGGAACTGGGTGCTCATGTTGGTTTTAATGA...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR GCA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCCCAGGAGGTGGAGGTTaGAGTAAGCTGCCATTGCAC +
Preference number: 2 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSPGGGG*SKLPLH
Trigger: GTGCAATGGCAGCTTACTGCAACCTCCACCTCCTGG...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACGCTACTGGCAGCACTTaGCAAAATCCATGTATGTGT +
Preference number: 2 (lower is better)
Translates to: SPQATKACRRGEAIKVIYATGST*QNPCMC
Trigger: ACACATACATGGATTTTGCCAAGTGCTGCCAGTAGC...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCTTAGGGATATTCAAATaGTGTGCCAGGTTTGTGATG +
Preference number: 2 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASLGIFK*CARFVM
Trigger: CATCACAAACCTGGCACACCATTTGAATATCCCTAA...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp GGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCGATGAGGAAAGCGACTaGAATGATATTAGGGATATT +
Preference number: 2 (lower is better)
Translates to: GATLKLADVLPLPLLHKLDEESD*NDIRDI
Trigger: AATATCCCTAATATCATTCCAGTCGCTTTCCTCATC...GAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CAA 90 bp GGCCAGCAGTGTAAATTAATCTTTCCCTCTCTGCTCAAAGCAACTTaGCAACTCTCGTCTATAGAGGTGGCCAGTAAAACCCAAGCAAAA +
Preference number: 2 (lower is better)
Translates to: GQQCKLIFPSLLKAT*QLSSIEVASKTQAK
Trigger: TTTTGCTTGGGTTTTACTGGCCACCTCTATAGACGAGAGTTGCAAAGTTGCTTTGAGCAGAGAGGGAAAGATTAATTTACACTGCTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTATTCCAAGCAGCAGATaGAGAGAGGTGACCCATCCT +
Preference number: 2 (lower is better)
Translates to: RQLMRKATGMILGIFKWCIPSSR*REVTHP
Trigger: AGGATGGGTCACCTCTCTTCATCTGCTGCTTGGAAT...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCAATATCAAAGGTAGATaGCTTCCTACATCTGTCGTA +
Preference number: 2 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASNIKGR*LPTSVV
Trigger: TACGACAGATGTAGGAAGTCATCTACCTTTGATATT...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCAGTAAAACATTAAAGTaGACATCTGTCCCATCTGTC +
Preference number: 2 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASSKTLK*TSVPSV
Trigger: GACAGATGGGACAGATGTTCACTTTAATGTTTTACT...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR GCA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACACCCTGGATGTCAACTaGTCCACTAGCATTATTAGA +
Preference number: 2 (lower is better)
Translates to: SPQATKACRRGEAIKVIYTLDVN*STSIIR
Trigger: TCTAATAATGCTAGTGGAGCAGTTGACATCCAGGGT...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR GCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGATACCCAGGAAACACCTaGCTTCGGTGGCCAGCAGTG +
Preference number: 2 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGYPGNT*LRWPAV
Trigger: CACTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTA...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CAA 90 bp CATATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTaGACCAGCATGTCTACTGGAAGTGGCACATTCAGAAGTGAGATC +
Preference number: 2 (lower is better)
Translates to: HIKLSRTLHPNDDCS*TSMSTGSGTFRSEI
Trigger: GATCTCACTTCTGAATGTGCCACTTCCAGTAGACATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp TGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAACAAGGGCACCAATATCAAAGGTAGATaGCTTCCTACATCTGTCGTA +
Preference number: 2 (lower is better)
Translates to: WCARFVMFSTKTNPNKGTNIKGR*LPTSVV
Trigger: TACGACAGATGTAGGAAGTCATCTACCTTTGATATT...GGTGCCCTTGTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGATGGGTGCACGTCTTCTaGCTTGGAGGTGATGACCTC +
Preference number: 2 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGWVHVF*LGGDDL
Trigger: GAGGTCATCACCTCCAAGCCAGAAGACGTGCACCCA...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCGCTACTGGCAGCACTTaGCAAAATCCATGTATGTGT +
Preference number: 2 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPATGST*QNPCMC
Trigger: ACACATACATGGATTTTGCCAAGTGCTGCCAGTAGC...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCGAAAAGGCCATTGGATaGAGACAACGTGTGCGTGTC +
Preference number: 2 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSEKAIG*RQRVRV
Trigger: GACACGCACACGTTGTCTCCATCCAATGGCCTTTTC...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAGGCCAAACCTTTCCGTaGACCTGGAAAACCTGCCAC +
Preference number: 2 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGGQTFP*TWKTCH
Trigger: GTGGCAGGTTTTCCAGGTCCACGGAAAGGTTTGGCC...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACATTCCAAGCAGCAGATaGAGAGAGGTGACCCATCCT +
Preference number: 2 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHIPSSR*REVTHP
Trigger: AGGATGGGTCACCTCTCTTCATCTGCTGCTTGGAAT...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACCCATTTCCGTCTCCATaGCAGAAGCCAAGCTTTCGT +
Preference number: 2 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHPFPSP*QKPSFR
Trigger: ACGAAAGCTTGGCTTCTGTCATGGAGACGGAAATGG...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTAAGTAAAACATTAAAGTaGACATCTGTCCCATCTGTC +
Preference number: 2 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLSKTLK*TSVPSV
Trigger: GACAGATGGGACAGATGTTCACTTTAATGTTTTACT...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCGTCTCATTTAGCATCTaGTGGCAAGTTGGGCTTTTT +
Preference number: 2 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPVSFSI*WQVGLF
Trigger: AAAAAGCCCAACTTGCCACCAGATGCTAAATGAGAC...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCGACATGGTCCAGGCATaGACCCAAAACAACACTTGT +
Preference number: 2 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSDMVQA*TQNNTC
Trigger: ACAAGTGTTGTTTTGGGTCCATGCCTGGACCATGTC...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCCTCCTTTTTGTGACATaGTCCAGGCATGGACCCAAA +
Preference number: 2 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSLLFVT*SRHGPK
Trigger: TTTGGGTCCATGCCTGGACCATGTCACAAAAAGGAG...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACGAAAAGGCCATTGGATaGAGACAACGTGTGCGTGTC +
Preference number: 2 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHEKAIG*RQRVRV
Trigger: GACACGCACACGTTGTCTCCATCCAATGGCCTTTTC...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCTTCAGAAAAGGCCATTaGATGGAGACAACGTGTGCG +
Preference number: 2 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSFRKGH*METTCA
Trigger: CGCACACGTTGTCTCCATCCAATGGCCTTTTCTGAA...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGTTCACAGCAAAATTCTaGAGCGCTCATAGAAGGAAT +
Preference number: 2 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMFTAKF*SAHRRN
Trigger: ATTCCTTCTATGAGCGCTTCAGAATTTTGCTGTGAA...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR GCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTATAGAAGGAATGTCCTaGGAGTTTGGCCCATTTGTT +
Preference number: 2 (lower is better)
Translates to: RQLMRKATGMILGIFKWCIEGMS*EFGPFV
Trigger: AACAAATGGGCCAAACTCGCAGGACATTCCTTCTAT...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAATATCAAAGGTAGATaGCTTCCTACATCTGTCGTA +
Preference number: 2 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPNIKGR*LPTSVV
Trigger: TACGACAGATGTAGGAAGTCATCTACCTTTGATATT...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAGACATGGTCCAGGCATaGACCCAAAACAACACTTGT +
Preference number: 2 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGDMVQA*TQNNTC
Trigger: ACAAGTGTTGTTTTGGGTCCATGCCTGGACCATGTC...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGACAGAGCCCTAGACCTTaGTATTCAACAGTAAGCAGC +
Preference number: 2 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGQSPRP*YSTVSS
Trigger: GCTGCTTACTGTTGAATACCAAGGTCTAGGGCTCTG...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCGCTGGAACAAGGAGATaGCTACTTTTTGTTATTGCT +
Preference number: 2 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSAGTRR*LLFVIA
Trigger: AGCAATAACAAAAAGTAGCCATCTCCTTGTTCCAGC...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAGAATGCAAACGGTCATaGACCCAAGTTAACCTGAGT +
Preference number: 2 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGECKRS*TQVNLS
Trigger: ACTCAGGTTAACTTGGGTCCATGACCGTTTGCATTC...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAGTCTCATTTAGCATCTaGTGGCAAGTTGGGCTTTTT +
Preference number: 2 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGVSFSI*WQVGLF
Trigger: AAAAAGCCCAACTTGCCACCAGATGCTAAATGAGAC...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAAAAAAGACTTTGTTTTaGCTACTGGCAGCACTTGGC +
Preference number: 2 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGKKTLF*LLAALG
Trigger: GCCAAGTGCTGCCAGTAGCCAAAACAAAGTCTTTTT...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR TCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGACGTTTAAAGTGCTACTaGGGAATACAATCATTGTCA +
Preference number: 2 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGRLKCY*GIQSLS
Trigger: TGACAATGATTGTATTCCTCAGTAGCACTTTAAACG...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CCA 72 bp TGGTTGGAAGAAACCCAGCAAGACAAGCGGGGCATCTaGACATCCGGCGGACACACTGGCTGCGTCCTGGTG +
Preference number: 3 (lower is better)
Translates to: WLEETQQDKRGI*TSGGHTGCVLV
Trigger: CACCAGGACGCAGCCAGTGTGTCCGCCGGATGTCCAGATGCCCCGCTTGTCTTGCTGGGTTTCTTCCAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGTGCACGTCTTCTGGCTaGGAGGTGATGACCTCAGGC +
Preference number: 3 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTCTSSG*EVMTSG
Trigger: GCCTGAGGTCATCACCTCCAAGCCAGAAGACGTGCA...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR GCA 72 bp AAACGGTCATGGACCCAAGTTAACCTGAGTTTGCTCTaGAGGATTCCGCGGGGGCCTTGCCCTGTGCAGGCT +
Preference number: 3 (lower is better)
Translates to: KRSWTQVNLSLL*RIPRGPCPVQA
Trigger: AGCCTGCACAGGGCAAGGCCCCCGCGGAATCCTGCAGAGCAAACTCAGGTTAACTTGGGTCCATGACCGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR GCA 72 bp CCACATCTTCTCCAAAGGAACCCACCCAAGCCCGTGTaGAGGCTTGCTGCAGGGCTGTCTTCGGCGTTTAAA +
Preference number: 3 (lower is better)
Translates to: PHLLQRNPPKPV*RLAAGLSSAFK
Trigger: TTTAAACGCCGAAGACAGCCCTGCAGCAAGCCTGCACACGGGCTTGGGTGGGTTCCTTTGGAGAAGATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR TCA 72 bp GTTTCGAATGCAAACGGTCATGGACCCAAGTTAACCTaGGTTTGCTCTGCAGGATTCCGCGGGGGCCTTGCC +
Preference number: 3 (lower is better)
Translates to: VSNANGHGPKLT*VCSAGFRGGLA
Trigger: GGCAAGGCCCCCGCGGAATCCTGCAGAGCAAACTCAGGTTAACTTGGGTCCATGACCGTTTGCATTCGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp GGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCTGCACGTCTTCTGGCTaGGAGGTGATGACCTCAGGC +
Preference number: 3 (lower is better)
Translates to: GATLKLADVLPLPLLHKLCTSSG*EVMTSG
Trigger: GCCTGAGGTCATCACCTCCAAGCCAGAAGACGTGCA...GAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR TCA 72 bp CCCAAGCAAAAATCTAAACGGGCACCAGGTGGCCACTaGGTGGCGACTGGTCGAGTAGCAGTTGGTCATAAG +
Preference number: 3 (lower is better)
Translates to: PKQKSKRAPGGH*VATGRVAVGHK
Trigger: CTTATGACCAACTGCTACTCGACCAGTCGCCACTCAGTGGCCACCTGGTGCCCGTTTAGATTTTTGCTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CCA 72 bp TGTGTTTGGTTACTGTGTTCTACGAGCGGTCACGTATaGCTCCTGACTTCATCTGACAGGCCCGCTGTGCTC +
Preference number: 3 (lower is better)
Translates to: CVWLLCSTSGHV*LLTSSDRPAVL
Trigger: GAGCACAGCGGGCCTGTCAGATGAAGTCAGGAGCCATACGTGACCGCTCGTAGAACACAGTAACCAAACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGCTTCAGAAAAGGCCATaGGATGGAGACAACGTGTGC +
Preference number: 3 (lower is better)
Translates to: IKSREITTQETPAFGGQQLQKRP*DGDNVC
Trigger: GCACACGTTGTCTCCATCCAATGGCCTTTTCTGAAG...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGGTGTTGCCTTTGCCTTaGCTTCATAAACTCCCTCCC +
Preference number: 3 (lower is better)
Translates to: IKSREITTQETPAFGGQQVLPLP*LHKLPP
Trigger: GGGAGGGAGTTTATGAAGCAAAGGCAAAGGCAACAC...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR TCA 72 bp GGTTACTGTGTTCTACGAGCGGTCACGTATGGCTCCTaGCTTCATCTGACAGGCCCGCTGTGCTCTTGTTTA +
Preference number: 3 (lower is better)
Translates to: GYCVLRAVTYGS*LHLTGPLCSCL
Trigger: TAAACAAGAGCACAGCGGGCCTGTCAGATGAAGTCAGGAGCCATACGTGACCGCTCGTAGAACACAGTAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCGCTACGGAAGGAAGCTaGCCCATTTCCGTCTCCATG +
Preference number: 3 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASATEGS*PISVSM
Trigger: CATGGAGACGGAAATGGGCAAGCTTCCTTCCGTAGC...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTACCTGTGCAGGCTGCTTaGGTCTTCGTGTCTAGGCCG +
Preference number: 3 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLPVQAA*VFVSRP
Trigger: CGGCCTAGACACGAAGACCAAAGCAGCCTGCACAGG...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGAAACTTCTGATATCCTaGCACTTGAATAGAGTGCAC +
Preference number: 3 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTKLLIS*HLNRVH
Trigger: GTGCACTCTATTCAAGTGCAAGGATATCAGAAGTTT...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATCTTCAGAAAAGGCCATaGGATGGAGACAACGTGTGC +
Preference number: 3 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNLQKRP*DGDNVC
Trigger: GCACACGTTGTCTCCATCCAATGGCCTTTTCTGAAG...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATAAGCTAGCCGACGTGTaGCCTTTGCCTTTGCTTCAT +
Preference number: 3 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNKLADV*PLPLLH
Trigger: ATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTT...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CCA 72 bp CGTGTGCGTGTCTACAGGAAGCAGAGCCCTAGACCTTaGTATTCAACAGTAAGCAGCGCTCATGGGATTCAT +
Preference number: 3 (lower is better)
Translates to: RVRVYRKQSPRP*YSTVSSAHGIH
Trigger: ATGAATCCCATGAGCGCTGCTTACTGTTGAATACCAAGGTCTAGGGCTCTGCTTCCTGTAGACACGCACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CCA 72 bp CGCACTCCAGCGTCAGGCCAAACCTTTCCGTGGACCTaGAAAACCTGCCACTTTCTTCTCTTTTTACAATGC +
Preference number: 3 (lower is better)
Translates to: RTPASGQTFPWT*KTCHFLLFLQC
Trigger: GCATTGTAAAAAGAGAAGAAAGTGGCAGGTTTTCCAGGTCCACGGAAAGGTTTGGCCTGACGCTGGAGTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCAAGTTGGGCTTTTTaGTCCTCTCTGGGAGAAGCC +
Preference number: 3 (lower is better)
Translates to: STKNRGTSLNKANGEGLQASWAF*SSLGEA
Trigger: GGCTTCTCCCAGAGAGGACAAAAAAGCCCAACTTGC...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCGTGTTGCCTTTGCCTTaGCTTCATAAACTCCCTCCC +
Preference number: 3 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASVLPLP*LHKLPP
Trigger: GGGAGGGAGTTTATGAAGCAAAGGCAAAGGCAACAC...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR GCA 72 bp AACATTCACAGTATCAATACAGCCCATTTCTCACGGTaGTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCC +
Preference number: 3 (lower is better)
Translates to: NIHSINTAHFSR*YPEASRRVAFA
Trigger: GGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACCGTGAGAAATGGGCTGTATTGATACTGTGAATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTAAGGCCCGCTGTGCTCTaGTTTAGCAAGTATGACAGG +
Preference number: 3 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLRPAVL*FSKYDR
Trigger: CCTGTCATACTTGCTAAACAAGAGCACAGCGGGCCT...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGAATCCATGTATGTGTTaGGTTACTGTGTTCTACGAG +
Preference number: 3 (lower is better)
Translates to: IKSREITTQETPAFGGQQNPCMC*VTVFYE
Trigger: CTCGTAGAACACAGTAACCAAACACATACATGGATT...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp TGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAACAAGGGCACCGGCTACTGGCAGCACTaGGCAAAATCCATGTATGTG +
Preference number: 3 (lower is better)
Translates to: WCARFVMFSTKTNPNKGTGYWQH*AKSMYV
Trigger: CACATACATGGATTTTGCCAAGTGCTGCCAGTAGCC...GGTGCCCTTGTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp GGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCTGCCCTAAAAAGACTTaGTTTTGGCTACTGGCAGCA +
Preference number: 3 (lower is better)
Translates to: GATLKLADVLPLPLLHKLCPKKT*FWLLAA
Trigger: TGCTGCCAGTAGCCAAAACAAAGTCTTTTTAGGGCA...GAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATGGATCAGGGCTGGTTTaGAACTCAGACTTGAAACTT +
Preference number: 3 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNGSGLV*NSDLKL
Trigger: AAGTTTCAAGTCTGAGTTCAAAACCAGCCCTGATCC...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR TCA 72 bp AGGCTACGGAAGGAAGCTTGCCCATTTCCGTCTCCATaGCAGAAGCCAAGCTTTCGTAACAGCCTTTTACAT +
Preference number: 3 (lower is better)
Translates to: RLRKEACPFPSP*QKPSFRNSLLH
Trigger: ATGTAAAAGGCTGTTACGAAAGCTTGGCTTCTGTCATGGAGACGGAAATGGGCAAGCTTCCTTCCGTAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR TCA 72 bp CCAATTTGTACTCTGAAGTTTCCAGATCAAGAGCCGTaGGATTACTACCCAGGAAACACCTGCCTTCGGTGG +
Preference number: 3 (lower is better)
Translates to: PICTLKFPDQEP*DYYPGNTCLRW
Trigger: CCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGATCTGGAAACTTCAGAGTACAAATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR TCA 72 bp CGTGTCCTGCCTTCCACCATCCACCAATTTGTACTCTaGAGTTTCCAGATCAAGAGCCGTGAGATTACTACC +
Preference number: 3 (lower is better)
Translates to: RVLPSTIHQFVL*SFQIKSREITT
Trigger: GGTAGTAATCTCACGGCTCTTGATCTGGAAACTTCAGAGTACAAATTGGTGGATGGTGGAAGGCAGGACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR GCA 72 bp AGTAAACAACAAACCACAAGCCTAAATGATGAATGGTaGGCTGCTGCCCAGCTGCTAACTGAGAGAACGAGG +
Preference number: 3 (lower is better)
Translates to: SKQQTTSLNDEW*AAAQLLTERTR
Trigger: CCTCGTTCTCTCAGTTAGCAGCTGGGCAGCAGCGCACCATTCATCATTTAGGCTTGTGGTTTGTTGTTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR GCA 72 bp GCGTCAGGCCAAACCTTTCCGTGGACCTGGAAAACCTaGCACTTTCTTCTCTTTTTACAATGCAGTTTCGAC +
Preference number: 3 (lower is better)
Translates to: ASGQTFPWTWKT*HFLLFLQCSFD
Trigger: GTCGAAACTGCATTGTAAAAAGAGAAGAAAGTGGCAGGTTTTCCAGGTCCACGGAAAGGTTTGGCCTGACGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACGGCTACTGGCAGCACTaGGCAAAATCCATGTATGTG +
Preference number: 3 (lower is better)
Translates to: SPQATKACRRGEAIKVIYGYWQH*AKSMYV
Trigger: CACATACATGGATTTTGCCAAGTGCTGCCAGTAGCC...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGTTTGGGGACAGAAACTaGGTAGTATTCACATGTTTT +
Preference number: 3 (lower is better)
Translates to: IKSREITTQETPAFGGQQFGDRN*VVFTCF
Trigger: AAAACATGTGAATACTACCAAGTTTCTGTCCCCAAA...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAAGCCCGTGTGCAGGCTaGCTGCAGGGCTGTCTTCGG +
Preference number: 3 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGSPCAG*LQGCLR
Trigger: CCGAAGACAGCCCTGCAGCAAGCCTGCACACGGGCT...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCGCAAGTTGGGCTTTTTaGTCCTCTCTGGGAGAAGCC +
Preference number: 3 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPASWAF*SSLGEA
Trigger: GGCTTCTCCCAGAGAGGACAAAAAAGCCCAACTTGC...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR TCA 72 bp AACCTGTGTCCAAGAGGACTGTTCACAGCAAAATTCTaGAGCGCTCATAGAAGGAATGTCCTGCGAGTTTGG +
Preference number: 3 (lower is better)
Translates to: NLCPRGLFTAKF*SAHRRNVLRVW
Trigger: CCAAACTCGCAGGACATTCCTTCTATGAGCGCTTCAGAATTTTGCTGTGAACAGTCCTCTTGGACACAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CCA 72 bp CGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATaGACCCAAGTTAACCTGAGTTTGCTCTGCAGGATT +
Preference number: 3 (lower is better)
Translates to: RGSVLCFECKRS*TQVNLSLLCRI
Trigger: AATCCTGCAGAGCAAACTCAGGTTAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTAAATGATGACTGCTCTTaGACCAGCATGTCTACTGGA +
Preference number: 3 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLNDDCS*TSMSTG
Trigger: TCCAGTAGACATGCTGGTCAAAGAGCAGTCATCATT...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTAGGATCAGGGCTGGTTTaGAACTCAGACTTGAAACTT +
Preference number: 3 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLGSGLV*NSDLKL
Trigger: AAGTTTCAAGTCTGAGTTCAAAACCAGCCCTGATCC...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR TCA 72 bp TGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTaGCCAGCATGTCTACTGGAAGTGGCACATTCAGAA +
Preference number: 3 (lower is better)
Translates to: CQEHFTPMMTAL*PACLLEVAHSE
Trigger: TTCTGAATGTGCCACTTCCAGTAGACATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR TCA 72 bp CTGTCCCATCTGTCCCAAAAGACTAACAGTGATGCCTaGCTTTGGGGACAGAAACTTGGTAGTATTCACATG +
Preference number: 3 (lower is better)
Translates to: LSHLSQKTNSDA*LWGQKLGSIHM
Trigger: CATGTGAATACTACCAAGTTTCTGTCCCCAAAGTCAGGCATCACTGTTAGTCTTTTGGGACAGATGGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR TCA 72 bp TTGCTGCAGGGCTGTCTTCGGCGTTTAAAGTGCTACTaGGGAATACAATCATTGTCACGTAAGTTCATCACC +
Preference number: 3 (lower is better)
Translates to: LLQGCLRRLKCY*GIQSLSRKFIT
Trigger: GGTGATGAACTTACGTGACAATGATTGTATTCCTCAGTAGCACTTTAAACGCCGAAGACAGCCCTGCAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGATGCACGTCTTCTGGCTaGGAGGTGATGACCTCAGGC +
Preference number: 3 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGCTSSG*EVMTSG
Trigger: GCCTGAGGTCATCACCTCCAAGCCAGAAGACGTGCA...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACGAATGTCCTGCGAGTTaGGCCCATTTGTTATTAAAC +
Preference number: 3 (lower is better)
Translates to: SPQATKACRRGEAIKVIYECPAS*AHLLLN
Trigger: GTTTAATAACAAATGGGCCAAACTCGCAGGACATTC...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR GCA 72 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTaGTCTTTGACCAGCATGTCTACTGGAAGTGGCACA +
Preference number: 3 (lower is better)
Translates to: IKLSRTLHPNDD*SLTSMSTGSGT
Trigger: TGTGCCACTTCCAGTAGACATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGGCCCGCTGTGCTCTaGTTTAGCAAGTATGACAGG +
Preference number: 3 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHRPAVL*FSKYDR
Trigger: CCTGTCATACTTGCTAAACAAGAGCACAGCGGGCCT...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCTGCCCTAAAAAGACTTaGTTTTGGCTACTGGCAGCA +
Preference number: 3 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPCPKKT*FWLLAA
Trigger: TGCTGCCAGTAGCCAAAACAAAGTCTTTTTAGGGCA...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAGCTACGGAAGGAAGCTaGCCCATTTCCGTCTCCATG +
Preference number: 3 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGATEGS*PISVSM
Trigger: CATGGAGACGGAAATGGGCAAGCTTCCTTCCGTAGC...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTAAAACTTCTGATATCCTaGCACTTGAATAGAGTGCAC +
Preference number: 3 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLKLLIS*HLNRVH
Trigger: GTGCACTCTATTCAAGTGCAAGGATATCAGAAGTTT...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR TCA 72 bp AAACGGGGAAGGGTTGCAAGCTCATTAAAACCAACATaGGCACCCAGTTCCAGAGATACAGACACAATTAAT +
Preference number: 3 (lower is better)
Translates to: KRGRVASSLKPT*APSSRDTDTIN
Trigger: ATTAATTGTGTCTGTATCTCTGGAACTGGGTGCTCATGTTGGTTTTAATGAGCTTGCAACCCTTCCCCGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CCA 72 bp AACTCTCACAGCAGGTTTTCAGCTGGAACAAGGAGATaGCTACTTTTTGTTATTGCTACAATAACACACGCG +
Preference number: 3 (lower is better)
Translates to: NSHSRFSAGTRR*LLFVIATITHA
Trigger: CGCGTGTGTTATTGTAGCAATAACAAAAAGTAGCCATCTCCTTGTTCCAGCTGAAAACCTGCTGTGAGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAAGGCCCGCTGTGCTCTaGTTTAGCAAGTATGACAGG +
Preference number: 3 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGRPAVL*FSKYDR
Trigger: CCTGTCATACTTGCTAAACAAGAGCACAGCGGGCCT...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACGGCTACTGGCAGCACTaGGCAAAATCCATGTATGTG +
Preference number: 3 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHGYWQH*AKSMYV
Trigger: CACATACATGGATTTTGCCAAGTGCTGCCAGTAGCC...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR GCA 72 bp TTCAGCTGGAACAAGGAGATGGCTACTTTTTGTTATTaGTACAATAACACACGCGTGTGTGCAAACACACAT +
Preference number: 3 (lower is better)
Translates to: FSWNKEMATFCY*YNNTRVCANTH
Trigger: ATGTGTGTTTGCACACACGCGTGTGTTATTGTAGCAATAACAAAAAGTAGCCATCTCCTTGTTCCAGCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAAAGCTAGCCGACGTGTaGCCTTTGCCTTTGCTTCAT +
Preference number: 3 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGKLADV*PLPLLH
Trigger: ATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTT...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTAATCCATGTATGTGTTaGGTTACTGTGTTCTACGAG +
Preference number: 3 (lower is better)
Translates to: RQLMRKATGMILGIFKWCNPCMC*VTVFYE
Trigger: CTCGTAGAACACAGTAACCAAACACATACATGGATT...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CCA 72 bp AGGAAAGCGACTGGAATGATATTAGGGATATTCAAATaGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACA +
Preference number: 3 (lower is better)
Translates to: RKATGMILGIFK*CARFVMFSTKT
Trigger: TGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAAATGATGACTGCTCTTaGACCAGCATGTCTACTGGA +
Preference number: 3 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGNDDCS*TSMSTG
Trigger: TCCAGTAGACATGCTGGTCAAAGAGCAGTCATCATT...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAGAATGTCCTGCGAGTTaGGCCCATTTGTTATTAAAC +
Preference number: 3 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGECPAS*AHLLLN
Trigger: GTTTAATAACAAATGGGCCAAACTCGCAGGACATTC...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR-3UTR CAA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAAACTTCTGATATCCTaGCACTTGAATAGAGTGCAC +
Preference number: 3 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHKLLIS*HLNRVH
Trigger: GTGCACTCTATTCAAGTGCAAGGATATCAGAAGTTT...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CAA 72 bp AGGATTCCGCGGGGGCCTTGCCCTGTGCAGGCTGCTTaGGTCTTCGTGTCTAGGCCGGTTTGGGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RIPRGPCPVQAA*VFVSRPVWGSG
Trigger: CCCACTGCCCCAAACCGGCCTAGACACGAAGACCAAAGCAGCCTGCACAGGGCAAGGCCCCCGCGGAATCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGCAAGCCCCGCACACCTaGGGAACAGGGGCGCGAGCG +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTQAPHT*GTGARA
Trigger: CGCTCGCGCCCCTGTTCCGCAGGTGTGCGGGGCTTG...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS-3UTR CCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGGGGTCCAGCAGGACCTaGCTGCTCCATGCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTGSSRT*LLHAAA
Trigger: GGCCGCGGCATGGAGCAGCCAGGTCCTGCTGGACCC...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGCGTCTGGGAAGTTCCTaGGCCGCTGCGGGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTRLGSS*AAAGRA
Trigger: AGCGCGGCCCGCAGCGGCCCAGGAACTTCCCAGACG...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS-3UTR GCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGCTGGCCAGCGCCCACTaGGCCAGGTACAGGCCTACC +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTLASAH*ARYRPT
Trigger: GGTAGGCCTGTACCTGGCGCAGTGGGCGCTGGCCAG...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS-3UTR GCA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGACCAGCGCGAGCCACTaGGCCTCCCCGAGCCACGAG +
Preference number: 4 (lower is better)
Translates to: IKSREITTQETPAFGGQQTSASH*ASPSHE
Trigger: CTCGTGGCTCGGGGAGGCGCAGTGGCTCGCGCTGGT...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS-3UTR CCA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGGCCGCCCTCTCCGGATaGGATGGGGCGTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: IKSREITTQETPAFGGQQAALSG*DGASSW
Trigger: CCAGGAGGACGCCCCATCCCATCCGGAGAGGGCGGC...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp CACACTGGCTGCGTCCTGGTGAGGGTAGTTAACATGGGTGCACGTCTTCTGGCTGCCTGGCCCACCACGTaGCAGACCACCACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: HTGCVLVRVVNMGARLLAAWPTT*QTTTFS
Trigger: GGAGAAGGTGGTGGTCTGTCACGTGGTGGGCCAGGC...AGCCAGAAGACGTGCACCCATGTTAACTACCCTCACCAGGACGCAGCCAGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS-3UTR GCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAAGCCCAGCACCGAGCTaGCGCAGGCAGACCCGCTGG +
Preference number: 4 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPSPAPS*RRQTRW
Trigger: CCAGCGGGTCTGCCTGCGGCAGCTCGGTGCTGGGCT...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR GCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGCGTCCTCCTGGTGGGTaGTGTCCACAGAGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTRPPGG*CPQRPC
Trigger: ACACGGCCTCTGTGGACAGCACCCACCAGGAGGACG...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCATGGCGGGGCAGAGGCTaGCGCCCTCTCCGGATGGGA +
Preference number: 4 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPWRGRG*RPLRMG
Trigger: TCCCATCCGGAGAGGGCGGCAGCCTCTGCCCCGCCA...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGCGCTGCGGCAGGCGATaGCCTGGACAGAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTRCGRR*PGQRCP
Trigger: AGGACATCTCTGTCCAGGCCATCGCCTGCCGCAGCG...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGCCATGCCGCGGCCTGTaGCTCCTTCTCCAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTPCRGL*LLLQVP
Trigger: TGGGACTTGGAGAAGGAGCCACAGGCCGCGGCATGG...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGCCTGGGTCTTTCTGTTaGTGCCGCCGGCGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTPGSFC*CRRRKN
Trigger: GTTCTTCCGCCGGCGGCATCAACAGAAAGACCCAGG...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATTGGCGGGGCAGAGGCTaGCGCCCTCTCCGGATGGGA +
Preference number: 4 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNWRGRG*RPLRMG
Trigger: TCCCATCCGGAGAGGGCGGCAGCCTCTGCCCCGCCA...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAACCTCAGGCCCTACGTaGAGGGCTCCACGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPTSGPT*RAPRGH
Trigger: GTGCCCCCGTGGAGCCCTGCACGTAGGGCCTGAGGT...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGCGTGTGCAGGCTTGCTaGAGGGCTGTCTTCGGCGTT +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTRVQAC*RAVFGV
Trigger: AACGCCGAAGACAGCCCTGCAGCAAGCCTGCACACG...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGCGGCAGGCGATGGCCTaGACAGAGATGTCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTRQAMA*TEMSFS
Trigger: CGAGAAGGACATCTCTGTCCAGGCCATCGCCTGCCG...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATGCCGCCCTCTCCGGATaGGATGGGGCGTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNAALSG*DGASSW
Trigger: CCAGGAGGACGCCCCATCCCATCCGGAGAGGGCGGC...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp CACACTGGCTGCGTCCTGGTGAGGGTAGTTAACATGGGTGCACGTCTTCTGGCTCCATGCCGCGGCCTGTaGCTCCTTCTCCAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: HTGCVLVRVVNMGARLLAPCRGL*LLLQVP
Trigger: TGGGACTTGGAGAAGGAGCCACAGGCCGCGGCATGG...AGCCAGAAGACGTGCACCCATGTTAACTACCCTCACCAGGACGCAGCCAGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATGGGTCCAGCAGGACCTaGCTGCTCCATGCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNGSSRT*LLHAAA
Trigger: GGCCGCGGCATGGAGCAGCCAGGTCCTGCTGGACCC...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGGCAGCGTCGTGGTCCTaGGATAGTGAGGTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTAASWS*DSEVLE
Trigger: CTCCAAGACCTCACTATCTCAGGACCACGACGCTGC...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp CACACTGGCTGCGTCCTGGTGAGGGTAGTTAACATGGGTGCACGTCTTCTGGCTCCTGGGTCTTTCTGTTaGTGCCGCCGGCGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: HTGCVLVRVVNMGARLLAPGSFC*CRRRKN
Trigger: GTTCTTCCGCCGGCGGCATCAACAGAAAGACCCAGG...AGCCAGAAGACGTGCACCCATGTTAACTACCCTCACCAGGACGCAGCCAGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGGCTCCTGACTTCATCTaGCAGGCCCGCTGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTAPDFI*QARCAL
Trigger: AAGAGCACAGCGGGCCTGTCAGATGAAGTCAGGAGC...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGGTCACGTATGGCTCCTaGCTTCATCTGACAGGCCCG +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTVTYGS*LHLTGP
Trigger: CGGGCCTGTCAGATGAAGTCAGGAGCCATACGTGAC...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp CACACTGGCTGCGTCCTGGTGAGGGTAGTTAACATGGGTGCACGTCTTCTGGCTACTCATGGAGCTCTCTaGCAGCTCATCACCGTCGGG +
Preference number: 4 (lower is better)
Translates to: HTGCVLVRVVNMGARLLATHGAL*QLITVG
Trigger: CCCGACGGTGATGAGCTGTCAGAGAGCTCCATGAGT...AGCCAGAAGACGTGCACCCATGTTAACTACCCTCACCAGGACGCAGCCAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCACCTCAGGCCCTACGTaGAGGGCTCCACGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASTSGPT*RAPRGH
Trigger: GTGCCCCCGTGGAGCCCTGCACGTAGGGCCTGAGGT...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCCCACCCAAGCCCGTGTaGAGGCTTGCTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GATLKLADVLPLPLLHKLPPKPV*RLAAGL
Trigger: CAGCCCTGCAGCAAGCCTGCACACGGGCTTGGGTGG...GAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCGTCACCCAGGCCGCCTaGCACTGGCTCCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASVTQAA*HWLLQL
Trigger: CAGCTGGAGGAGCCAGTGGCAGGCGGCCTGGGTGAC...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS-3UTR CCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATCCTCTCCGGATGGGATaGGGCGTCCTCCTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNPLRMG*GVLLVG
Trigger: ACCCACCAGGAGGACGCCCCATCCCATCCGGAGAGG...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATCCGGCGGACACACTaGCTGCGTCCTGGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPIRRTH*LRPGEG
Trigger: ACCCTCACCAGGACGCAGCCAGTGTGTCCGCCGGAT...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGGGCCAAACCTTTCCGTaGACCTGGAAAACCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTGQTFP*TWKTCH
Trigger: GTGGCAGGTTTTCCAGGTCCACGGAAAGGTTTGGCC...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATAGGCACCGGGCTCGCTaGGCAGCAAGACGTGGATGT +
Preference number: 4 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNRHRAR*AARRGC
Trigger: ACATCCACGTCTTGCTGCTCAGCGAGCCCGGTGCCT...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGGCTCCTGACTTCATCTaGCAGGCCCGCTGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: IKSREITTQETPAFGGQQAPDFI*QARCAL
Trigger: AAGAGCACAGCGGGCCTGTCAGATGAAGTCAGGAGC...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp GGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCGCACCAGGTGGCCACTaGGTGGCGACTGGTCGAGTA +
Preference number: 4 (lower is better)
Translates to: GATLKLADVLPLPLLHKLAPGGH*VATGRV
Trigger: TACTCGACCAGTCGCCACTCAGTGGCCACCTGGTGC...GAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGTGCCCAGCTGCTAACTaGGAGAACGAGGCAGTGTAT +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTCPAAN*ENEAVY
Trigger: ATACACTGCCTCGTTCTCTCAGTTAGCAGCTGGGCA...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTAAGCCCAGCACCGAGCTaGCGCAGGCAGACCCGCTGG +
Preference number: 4 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLSPAPS*RRQTRW
Trigger: CCAGCGGGTCTGCCTGCGGCAGCTCGGTGCTGGGCT...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR GCA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAAAGTTCCTGGGCCGCTaGGGGCCGCGCTTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: STKNRGTSLNKANGEGLQKFLGR*GPRFLL
Trigger: CAGGAGGAAGCGCGGCCCGCAGCGGCCCAGGAACTT...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS-3UTR GCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATACGCTGGAGACCTCCTaGACCACCAGCTCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNTLETS*TTSSSA
Trigger: GGCACTGGAGCTGGTGGTGCAGGAGGTCTCCAGCGT...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS-3UTR CCA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGCTTGTCTCAGCCACCTaGTCCTCCCCCAGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: IKSREITTQETPAFGGQQLVSAT*SSPSAL
Trigger: CAAAGCACTGGGGGAGGACCAGGTGGCTGAGACAAG...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CCA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACGCCGCCCTCTCCGGATaGGATGGGGCGTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SPQATKACRRGEAIKVIYAALSG*DGASSW
Trigger: CCAGGAGGACGCCCCATCCCATCCGGAGAGGGCGGC...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCGGTACAGGCCTACCGTaGCCAGGGCCGCGACGAAGA +
Preference number: 4 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASGTGLP*PGPRRR
Trigger: TCTTCGTCGCGGCCCTGGCCACGGTAGGCCTGTACC...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380486.4
3UTR CAA 72 bp GAATGCAAACGGTCATGGACCCAAGTTAACCTGAGTTaGCTCTGCAGGATTCCGCGGGGGCCTTGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: ECKRSWTQVNLS*LCRIPRGPCPV
Trigger: CACAGGGCAAGGCCCCCGCGGAATCCTGCAGAGCAAACTCAGGTTAACTTGGGTCCATGACCGTTTGCATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CAA 72 bp TTCTCCAAAGGAACCCACCCAAGCCCGTGTGCAGGCTaGCTGCAGGGCTGTCTTCGGCGTTTAAAGTGCTAC +
Preference number: 4 (lower is better)
Translates to: FSKGTHPSPCAG*LQGCLRRLKCY
Trigger: GTAGCACTTTAAACGCCGAAGACAGCCCTGCAGCAAGCCTGCACACGGGCTTGGGTGGGTTCCTTTGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCGCCTGGCCCACCACGTaGCAGACCACCACCTATGCA +
Preference number: 4 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASAWPTT*QTTTYA
Trigger: TGCATAGGTGGTGGTCTGTCACGTGGTGGGCCAGGC...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329623.11
CDS-3UTR TCA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGGTGCTGGAGAACCTCTaGACAGGATCGTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: IKSREITTQETPAFGGQQVLENL*TGSFSC
Trigger: GCAGCTGAACGATCCTGTTCAGAGGTTCTCCAGCAC...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGCGATCACCTTCACCTTaGTGGGAGTCTTCACCGGAG +
Preference number: 4 (lower is better)
Translates to: IKSREITTQETPAFGGQQRSPSP*WESSPE
Trigger: CTCCGGTGAAGACTCCCATCAAGGTGAAGGTGATCG...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAACTCATGGAGCTCTCTaGCAGCTCATCACCGTCGGG +
Preference number: 4 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPTHGAL*QLITVG
Trigger: CCCGACGGTGATGAGCTGTCAGAGAGCTCCATGAGT...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATCCTGGGTCTTTCTGTTaGTGCCGCCGGCGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNPGSFC*CRRRKN
Trigger: GTTCTTCCGCCGGCGGCATCAACAGAAAGACCCAGG...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCGCACCAGGTGGCCACTaGGTGGCGACTGGTCGAGTA +
Preference number: 4 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASAPGGH*VATGRV
Trigger: TACTCGACCAGTCGCCACTCAGTGGCCACCTGGTGC...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGCCAGATCAAGAGCCGTaGGATTACTACCCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTPDQEP*DYYPGN
Trigger: GTTTCCTGGGTAGTAATCTCACGGCTCTTGATCTGG...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGACCTGGCTGCTCCATaGCGCGGCCTGTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: STKNRGTSLNKANGEGLQDLAAP*RGLWLL
Trigger: AAGGAGCCACAGGCCGCGGCATGGAGCAGCCAGGTC...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTACCAGCAGGACCTGGCTaGTCCATGCCGCGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLPAGPG*SMPRPV
Trigger: CACAGGCCGCGGCATGGAGCAGCCAGGTCCTGCTGG...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACCCAGCAGGACCTGGCTaGTCCATGCCGCGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SPQATKACRRGEAIKVIYPAGPG*SMPRPV
Trigger: CACAGGCCGCGGCATGGAGCAGCCAGGTCCTGCTGG...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp TGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAACAAGGGCACCGCCCGTGTGCAGGCTTaGTGCAGGGCTGTCTTCGGC +
Preference number: 4 (lower is better)
Translates to: WCARFVMFSTKTNPNKGTARVQA*CRAVFG
Trigger: GCCGAAGACAGCCCTGCAGCAAGCCTGCACACGGGC...GGTGCCCTTGTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCACACACTGCATTAATGTaGCCTGAGGCACCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPHTALM*PEAPGS
Trigger: CGAGCCCGGTGCCTCAGGCCACATTAATGCAGTGTG...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CCA 90 bp CACACTGGCTGCGTCCTGGTGAGGGTAGTTAACATGGGTGCACGTCTTCTGGCTGAACAGGGGGAGGGATaGGCCAGGATTTCAATTCAC +
Preference number: 4 (lower is better)
Translates to: HTGCVLVRVVNMGARLLAEQGEG*ARISIH
Trigger: GTGAATTGAAATCCTGGCCCATCCCTCCCCCTGTTC...AGCCAGAAGACGTGCACCCATGTTAACTACCCTCACCAGGACGCAGCCAGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGCTCCTTTATGCTTTTTaGCAGTGCCCGGCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTLLYAF*QCPAPR
Trigger: TCTTGGAGCCGGGCACTGCCAAAAAGCATAAAGGAG...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGTGTCTAGGCCGGTTTaGGGCAGTGGGGAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: STKNRGTSLNKANGEGLQVSRPV*GSGERA
Trigger: GGCCCTCTCCCCACTGCCCCAAACCGGCCTAGACAC...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAGTGCTGGAGAACCTCTaGACAGGATCGTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPVLENL*TGSFSC
Trigger: GCAGCTGAACGATCCTGTTCAGAGGTTCTCCAGCAC...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTAAAGGGATGCCTGGGCTaGCTCGGCTTCCTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLKGCLG*LGFLWR
Trigger: CCGCCAGAGGAAGCCGAGTCAGCCCAGGCATCCCTT...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp CACACTGGCTGCGTCCTGGTGAGGGTAGTTAACATGGGTGCACGTCTTCTGGCTCCATTTCCGTCTCCATaGCAGAAGCCAAGCTTTCGT +
Preference number: 4 (lower is better)
Translates to: HTGCVLVRVVNMGARLLAPFPSP*QKPSFR
Trigger: ACGAAAGCTTGGCTTCTGTCATGGAGACGGAAATGG...AGCCAGAAGACGTGCACCCATGTTAACTACCCTCACCAGGACGCAGCCAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp TGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAACAAGGGCACCGCACCAGGTGGCCACTaGGTGGCGACTGGTCGAGTA +
Preference number: 4 (lower is better)
Translates to: WCARFVMFSTKTNPNKGTAPGGH*VATGRV
Trigger: TACTCGACCAGTCGCCACTCAGTGGCCACCTGGTGC...GGTGCCCTTGTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGAGAATTCCTCCTTTATaGTTTTTGGCAGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTRIPPL*FLAVPG
Trigger: GCCGGGCACTGCCAAAAAGCATAAAGGAGGAATTCT...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATCGGGAACCCTCTGGCTaGTCCAGGAACACAAGGTCA +
Preference number: 4 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNREPSG*SRNTRS
Trigger: TGACCTTGTGTTCCTGGAGCAGCCAGAGGGTTCCCG...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCTACCCAGGAAACACCTaGCTTCGGTGGCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: GATLKLADVLPLPLLHKLYPGNT*LRWPAV
Trigger: CACTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTA...GAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGGGCCACTTCAGCCACTaGATCCGAACCATTCAACAC +
Preference number: 4 (lower is better)
Translates to: IKSREITTQETPAFGGQQGHFSH*IRTIQH
Trigger: GTGTTGAATGGTTCGGATCCAGTGGCTGAAGTGGCC...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CCA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGGGGCAAGGGATGCCTaGGCTGACTCGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: STKNRGTSLNKANGEGLQGARDA*ADSASS
Trigger: AGAGGAAGCCGAGTCAGCCCAGGCATCCCTTGCCCC...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGGGGTCCAGCAGGACCTaGCTGCTCCATGCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMGSSRT*LLHAAA
Trigger: GGCCGCGGCATGGAGCAGCCAGGTCCTGCTGGACCC...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGGACATGGTCCAGGCATaGACCCAAAACAACACTTGT +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTDMVQA*TQNNTC
Trigger: ACAAGTGTTGTTTTGGGTCCATGCCTGGACCATGTC...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGCTCCTTTTTGTGACATaGTCCAGGCATGGACCCAAA +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTLLFVT*SRHGPK
Trigger: TTTGGGTCCATGCCTGGACCATGTCACAAAAAGGAG...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGTTCAGAAAAGGCCATTaGATGGAGACAACGTGTGCG +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTFRKGH*METTCA
Trigger: CGCACACGTTGTCTCCATCCAATGGCCTTTTCTGAA...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCCAGGCCGCCTGCCACTaGCTCCTCCAGCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPQAACH*LLQLPS
Trigger: GCTGGGCAGCTGGAGGAGCCAGTGGCAGGCGGCCTG...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380486.4
3UTR CAA 72 bp CACGGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTaGCCTTTGCTTCATAAACTCCCTCCCATGTTGGTG +
Preference number: 4 (lower is better)
Translates to: HGATLKLADVLP*PLLHKLPPMLV
Trigger: CACCAACATGGGAGGGAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTAACCCGCTGGTCAGCGTaGAGCTCTGTGGCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLTRWSA*SSVAQK
Trigger: CTTCTGGGCCACAGAGCTTCACGCTGACCAGCGGGT...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTAAAGAGAACTCTGCCGTaGCCGAGCCCAGCACCGAGC +
Preference number: 4 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLKRTLP*PSPAPS
Trigger: GCTCGGTGCTGGGCTCGGTCACGGCAGAGTTCTCTT...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTAAAGAGAGTGTTTTGCTaGCGGGGGCGCTGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLKRVFC*RGRCGR
Trigger: CCTGCCGCAGCGCCCCCGTCAGCAAAACACTCTCTT...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGAGGTCATTGTGTGACTaGCTCATGCCTGGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: IKSREITTQETPAFGGQQRSLCD*LMPGSF
Trigger: GAAAGACCCAGGCATGAGTCAGTCACACAATGACCT...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATGGCACCTCCTTTTTGTaGCATGGTCCAGGCATGGAC +
Preference number: 4 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNGTSFL*HGPGMD
Trigger: GTCCATGCCTGGACCATGTCACAAAAAGGAGGTGCC...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGCCATTTCCGTCTCCATaGCAGAAGCCAAGCTTTCGT +
Preference number: 4 (lower is better)
Translates to: IKSREITTQETPAFGGQQPFPSP*QKPSFR
Trigger: ACGAAAGCTTGGCTTCTGTCATGGAGACGGAAATGG...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGCCAGATCAAGAGCCGTaGGATTACTACCCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: IKSREITTQETPAFGGQQPDQEP*DYYPGN
Trigger: GTTTCCTGGGTAGTAATCTCACGGCTCTTGATCTGG...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGGGACCCAAGTTAACCTaGGTTTGCTCTGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: IKSREITTQETPAFGGQQGPKLT*VCSAGF
Trigger: GAATCCTGCAGAGCAAACTCAGGTTAACTTGGGTCC...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTTGGCGGGGCAGAGGCTaGCGCCCTCTCCGGATGGGA +
Preference number: 4 (lower is better)
Translates to: RQLMRKATGMILGIFKWCWRGRG*RPLRMG
Trigger: TCCCATCCGGAGAGGGCGGCAGCCTCTGCCCCGCCA...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGCCAGCAGGACCTGGCTaGTCCATGCCGCGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMPAGPG*SMPRPV
Trigger: CACAGGCCGCGGCATGGAGCAGCCAGGTCCTGCTGG...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCCGGGAACCCTCTGGCTaGTCCAGGAACACAAGGTCA +
Preference number: 4 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASREPSG*SRNTRS
Trigger: TGACCTTGTGTTCCTGGAGCAGCCAGAGGGTTCCCG...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGCAGAGATACGTGTCCTaGCTTCCACCATCCACCAAT +
Preference number: 4 (lower is better)
Translates to: IKSREITTQETPAFGGQQQRYVS*LPPSTN
Trigger: ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTG...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAACGTGTGCAGGCTTGCTaGAGGGCTGTCTTCGGCGTT +
Preference number: 4 (lower is better)
Translates to: STKNRGTSLNKANGEGLQRVQAC*RAVFGV
Trigger: AACGCCGAAGACAGCCCTGCAGCAAGCCTGCACACG...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATCAGCTCGTGAGCCCTTaGAGGTTTAGGAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNQLVSP*RFRRTG
Trigger: TCCTGTCCTCCTAAACCTCCAAGGGCTCACGAGCTG...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGGGGGCGTCCTCCTGGTaGGTGCTGTCCACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMGASSW*VLSTEA
Trigger: GGCCTCTGTGGACAGCACCCACCAGGAGGACGCCCC...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACGATGGGGCGTCCTCCTaGTGGGTGCTGTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: SPQATKACRRGEAIKVIYDGASS*WVLSTE
Trigger: CTCTGTGGACAGCACCCACCAGGAGGACGCCCCATC...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACGGGGCAAGGGATGCCTaGGCTGACTCGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SPQATKACRRGEAIKVIYGARDA*ADSASS
Trigger: AGAGGAAGCCGAGTCAGCCCAGGCATCCCTTGCCCC...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAACGAGCGGTCACGTATaGCTCCTGACTTCATCTGAC +
Preference number: 4 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPTSGHV*LLTSSD
Trigger: GTCAGATGAAGTCAGGAGCCATACGTGACCGCTCGT...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCCTGTGCAGGCTGCTTTaGTCTTCGTGTCTAGGCCGG +
Preference number: 4 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASLCRLL*SSCLGR
Trigger: CCGGCCTAGACACGAAGACCAAAGCAGCCTGCACAG...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGGAATGCAAACGGTCATaGACCCAAGTTAACCTGAGT +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTECKRS*TQVNLS
Trigger: ACTCAGGTTAACTTGGGTCCATGACCGTTTGCATTC...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp CACACTGGCTGCGTCCTGGTGAGGGTAGTTAACATGGGTGCACGTCTTCTGGCTACCTTTCCGTGGACCTaGAAAACCTGCCACTTTCTT +
Preference number: 4 (lower is better)
Translates to: HTGCVLVRVVNMGARLLATFPWT*KTCHFL
Trigger: AAGAAAGTGGCAGGTTTTCCAGGTCCACGGAAAGGT...AGCCAGAAGACGTGCACCCATGTTAACTACCCTCACCAGGACGCAGCCAGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATTCCTCTTCCCACATaGGGTCCGGAGTGTTTTTCG +
Preference number: 4 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPIPLPT*GPECFS
Trigger: CGAAAAACACTCCGGACCTCATGTGGGAAGAGGAAT...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp TGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAACAAGGGCACCGCAGCGTCGTGGTCCTaGGATAGTGAGGTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: WCARFVMFSTKTNPNKGTAASWS*DSEVLE
Trigger: CTCCAAGACCTCACTATCTCAGGACCACGACGCTGC...GGTGCCCTTGTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAGGGATGCCTGGGCTaGCTCGGCTTCCTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPKGCLG*LGFLWR
Trigger: CCGCCAGAGGAAGCCGAGTCAGCCCAGGCATCCCTT...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGAAGGGATGCCTGGGCTaGCTCGGCTTCCTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMKGCLG*LGFLWR
Trigger: CCGCCAGAGGAAGCCGAGTCAGCCCAGGCATCCCTT...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAAGGTCATTGTGTGACTaGCTCATGCCTGGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPRSLCD*LMPGSF
Trigger: GAAAGACCCAGGCATGAGTCAGTCACACAATGACCT...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp GGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCCACAAGGTCATTGTGTaGCTGACTCATGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: GATLKLADVLPLPLLHKLHKVIV*LTHAWV
Trigger: GACCCAGGCATGAGTCAGTCACACAATGACCTTGTG...GAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGCACCAATTTGTACTCTaGAGTTTCCAGATCAAGAGC +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTHQFVL*SFQIKS
Trigger: GCTCTTGATCTGGAAACTTCAGAGTACAAATTGGTG...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAGGACCCAAGTTAACCTaGGTTTGCTCTGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPGPKLT*VCSAGF
Trigger: GAATCCTGCAGAGCAAACTCAGGTTAACTTGGGTCC...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCATATGCTTTTTGGCAGTaGCCGGCTCCAAGACACTCA +
Preference number: 4 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPYAFWQ*PAPRHS
Trigger: TGAGTGTCTTGGAGCCGGGCACTGCCAAAAAGCATA...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp CACACTGGCTGCGTCCTGGTGAGGGTAGTTAACATGGGTGCACGTCTTCTGGCTTGTGTGACTGACTCATaGCTGGGTCTTTCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: HTGCVLVRVVNMGARLLACVTDS*LGLSVD
Trigger: ATCAACAGAAAGACCCAGGCATGAGTCAGTCACACA...AGCCAGAAGACGTGCACCCATGTTAACTACCCTCACCAGGACGCAGCCAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCGCCCATTTCTCACGGTaGTACCCTGAAGCTAGCCGA +
Preference number: 4 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASAHFSR*YPEASR
Trigger: TCGGCTAGCTTCAGGGTAGCACCGTGAGAAATGGGC...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp CACACTGGCTGCGTCCTGGTGAGGGTAGTTAACATGGGTGCACGTCTTCTGGCTCAAACGGGGAAGGGTTaGAAGCTCATTAAAACCAAC +
Preference number: 4 (lower is better)
Translates to: HTGCVLVRVVNMGARLLAQTGKG*KLIKTN
Trigger: GTTGGTTTTAATGAGCTTGCAACCCTTCCCCGTTTG...AGCCAGAAGACGTGCACCCATGTTAACTACCCTCACCAGGACGCAGCCAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp TGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAACAAGGGCACCTACCCAGGAAACACCTaGCTTCGGTGGCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: WCARFVMFSTKTNPNKGTYPGNT*LRWPAV
Trigger: CACTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTA...GGTGCCCTTGTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGGTATTGTGTTTCGAATaGAAACGGTCATGGACCCAA +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTVLCFE*KRSWTQ
Trigger: TTGGGTCCATGACCGTTTGCATTCGAAACACAATAC...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAAACTCCAGCTGTAAATaGAAAGGGGAGAGCCGCATG +
Preference number: 4 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPNSSCK*KGESRM
Trigger: CATGCGGCTCTCCCCTTTCCATTTACAGCTGGAGTT...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CCA 90 bp CACACTGGCTGCGTCCTGGTGAGGGTAGTTAACATGGGTGCACGTCTTCTGGCTCTCTTCTCCTTCATGTaGAACTCCAGCTGTAAATGG +
Preference number: 4 (lower is better)
Translates to: HTGCVLVRVVNMGARLLALFSFM*NSSCKW
Trigger: CCATTTACAGCTGGAGTTCCACATGAAGGAGAAGAG...AGCCAGAAGACGTGCACCCATGTTAACTACCCTCACCAGGACGCAGCCAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CCA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGAAAGACCAGCTAATCTaGAGGTCCTCTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: IKSREITTQETPAFGGQQKDQLI*RSSLFS
Trigger: GGAGAAGAGAGAGGACCTCCAGATTAGCTGGTCTTT...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CCA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAACACACTGCATTAATGTaGCCTGAGGCACCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: STKNRGTSLNKANGEGLQHTALM*PEAPGS
Trigger: CGAGCCCGGTGCCTCAGGCCACATTAATGCAGTGTG...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATGAACAGGGGGAGGGATaGGCCAGGATTTCAATTCAC +
Preference number: 4 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNEQGEG*ARISIH
Trigger: GTGAATTGAAATCCTGGCCCATCCCTCCCCCTGTTC...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CCA 90 bp CACACTGGCTGCGTCCTGGTGAGGGTAGTTAACATGGGTGCACGTCTTCTGGCTAGTGCTTTTCTTCCGTaGCGACTTGAGTTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: HTGCVLVRVVNMGARLLASAFLP*RLEFQL
Trigger: AAGCTGAAACTCAAGTCGCCACGGAAGAAAAGCACT...AGCCAGAAGACGTGCACCCATGTTAACTACCCTCACCAGGACGCAGCCAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTGGGGCGTCCTCCTGGTaGGTGCTGTCCACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: RQLMRKATGMILGIFKWCGASSW*VLSTEA
Trigger: GGCCTCTGTGGACAGCACCCACCAGGAGGACGCCCC...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCACTCCTTTATGCTTTTTaGCAGTGCCCGGCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPLLYAF*QCPAPR
Trigger: TCTTGGAGCCGGGCACTGCCAAAAAGCATAAAGGAG...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGGTCTCATTTAGCATCTaGTGGCAAGTTGGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTVSFSI*WQVGLF
Trigger: AAAAAGCCCAACTTGCCACCAGATGCTAAATGAGAC...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATACGAGCGGTCACGTATaGCTCCTGACTTCATCTGAC +
Preference number: 4 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNTSGHV*LLTSSD
Trigger: GTCAGATGAAGTCAGGAGCCATACGTGACCGCTCGT...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGTTCAGAAAAGGCCATTaGATGGAGACAACGTGTGCG +
Preference number: 4 (lower is better)
Translates to: IKSREITTQETPAFGGQQFRKGH*METTCA
Trigger: CGCACACGTTGTCTCCATCCAATGGCCTTTTCTGAA...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAACTGTGCAGGCTGCTTTaGTCTTCGTGTCTAGGCCGG +
Preference number: 4 (lower is better)
Translates to: STKNRGTSLNKANGEGLQLCRLL*SSCLGR
Trigger: CCGGCCTAGACACGAAGACCAAAGCAGCCTGCACAG...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGTCCCGACTCGGCGTCTaGGAAGTTCCTGGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMSRLGV*EVPGPL
Trigger: CAGCGGCCCAGGAACTTCCCAGACGCCGAGTCGGGA...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS-3UTR TCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATATTCCTCTTCCCACATaGGGTCCGGAGTGTTTTTCG +
Preference number: 4 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNIPLPT*GPECFS
Trigger: CGAAAAACACTCCGGACCTCATGTGGGAAGAGGAAT...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATGCAGATGAAGAGAGGTaGCCCATCCTTTCCATTCAC +
Preference number: 4 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNADEER*PILSIH
Trigger: GTGAATGGAAAGGATGGGTCACCTCTCTTCATCTGC...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp GGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCCCATTTCCGTCTCCATaGCAGAAGCCAAGCTTTCGT +
Preference number: 4 (lower is better)
Translates to: GATLKLADVLPLPLLHKLPFPSP*QKPSFR
Trigger: ACGAAAGCTTGGCTTCTGTCATGGAGACGGAAATGG...GAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTAGGCAGGAGAATCGCTTaGACCAGGAGGTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLGRRIA*TRRWRL
Trigger: CAACCTCCACCTCCTGGTTCAAGCGATTCTCCTGCC...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp CACACTGGCTGCGTCCTGGTGAGGGTAGTTAACATGGGTGCACGTCTTCTGGCTCACCAATTTGTACTCTaGAGTTTCCAGATCAAGAGC +
Preference number: 4 (lower is better)
Translates to: HTGCVLVRVVNMGARLLAHQFVL*SFQIKS
Trigger: GCTCTTGATCTGGAAACTTCAGAGTACAAATTGGTG...AGCCAGAAGACGTGCACCCATGTTAACTACCCTCACCAGGACGCAGCCAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAACAGACCACCACCTATaGAAACAGCGCTTATCTGGA +
Preference number: 4 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPTDHHL*KQRLSG
Trigger: TCCAGATAAGCGCTGTTTGCATAGGTGGTGGTCTGT...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329623.11
CDS-3UTR GCA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCCTGGTCCTCCCCCAGTaGTTTGGGCTGGATATTAAC +
Preference number: 4 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASLVLPQ*FGLDIN
Trigger: GTTAATATCCAGCCCAAAGCACTGGGGGAGGACCAG...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR GCA 90 bp GGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCACAGGATCGTTCAGCTaGACGACGCACACTGCATTA +
Preference number: 4 (lower is better)
Translates to: GATLKLADVLPLPLLHKLTGSFS*TTHTAL
Trigger: TAATGCAGTGTGCGTCGTGCAGCTGAACGATCCTGT...GAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR GCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATTATGCTTTTTGGCAGTaGCCGGCTCCAAGACACTCA +
Preference number: 4 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNYAFWQ*PAPRHS
Trigger: TGAGTGTCTTGGAGCCGGGCACTGCCAAAAAGCATA...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAAGAATTCCTCCTTTATaGTTTTTGGCAGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPRIPPL*FLAVPG
Trigger: GCCGGGCACTGCCAAAAAGCATAAAGGAGGAATTCT...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAACCAGGAGGTGGAGGTTaGAGTAAGCTGCCATTGCAC +
Preference number: 4 (lower is better)
Translates to: STKNRGTSLNKANGEGLQPGGGG*SKLPLH
Trigger: GTGCAATGGCAGCTTACTGCAACCTCCACCTCCTGG...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTAAACCTGAGTTTGCTCTaGAGGATTCCGCGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLNLSLL*RIPRGP
Trigger: AGGCCCCCGCGGAATCCTGCAGAGCAAACTCAGGTT...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATCTAAATGATGAATGGTaGGCTGCTGCCCAGCTGCTA +
Preference number: 4 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNLNDEW*AAAQLL
Trigger: TAGCAGCTGGGCAGCAGCGCACCATTCATCATTTAG...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGTGGACCTGGAAAACCTaGCACTTTCTTCTCTTTTTA +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTWTWKT*HFLLFL
Trigger: TAAAAAGAGAAGAAAGTGGCAGGTTTTCCAGGTCCA...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAAGGACACGCGCTGGCTaGGGCCACAGCGCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGRTRAG*GHSALG
Trigger: CCCCAGCGCGCTGTGGCCGCAGCCAGCGCGTGTCCT...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS-3UTR GCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGACTGGCTCCTCCAGCTaGCCAGCGTCAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMTGSSS*PASGSR
Trigger: CCTGGATCCTGACGCTGGGCAGCTGGAGGAGCCAGT...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS-3UTR GCA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAGCTCCAGTGCCTGCTaGCGCGGGTCCTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPSSSAC*RGSSSK
Trigger: CTTTGAGGAGGACCCGCGGCAGCAGGCACTGGAGCT...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS-3UTR GCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTACCAGCTCCAGTGCCTaGTGCCGCGGGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RQLMRKATGMILGIFKWCTSSSA*CRGSSS
Trigger: TGAGGAGGACCCGCGGCAGCAGGCACTGGAGCTGGT...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS-3UTR CCA 90 bp TGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAACAAGGGCACCCAGCTCGTGAGCCCTTaGAGGTTTAGGAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: WCARFVMFSTKTNPNKGTQLVSP*RFRRTG
Trigger: TCCTGTCCTCCTAAACCTCCAAGGGCTCACGAGCTG...GGTGCCCTTGTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGCGCTGCGGCAGGCGATaGCCTGGACAGAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMRCGRR*PGQRCP
Trigger: AGGACATCTCTGTCCAGGCCATCGCCTGCCGCAGCG...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGGATGGGGCGTCCTCCTaGTGGGTGCTGTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMDGASS*WVLSTE
Trigger: CTCTGTGGACAGCACCCACCAGGAGGACGCCCCATC...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGCCATGCCGCGGCCTGTaGCTCCTTCTCCAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMPCRGL*LLLQVP
Trigger: TGGGACTTGGAGAAGGAGCCACAGGCCGCGGCATGG...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp TGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAACAAGGGCACCCGGGGGCACCGTTCATaGTGTTCTTGTTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: WCARFVMFSTKTNPNKGTRGHRS*CSCFCA
Trigger: GGCACAGAAACAAGAACACCATGAACGGTGCCCCCG...GGTGCCCTTGTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCCTGGGAGAAGCCTCCTaGCTGGAGACTCAGATTTTG +
Preference number: 4 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASLGEAS*LETQIL
Trigger: CAAAATCTGAGTCTCCAGCCAGGAGGCTTCTCCCAG...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGTTAGGGATATTCAAATaGTGTGCCAGGTTTGTGATG +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTLGIFK*CARFVM
Trigger: CATCACAAACCTGGCACACCATTTGAATATCCCTAA...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCATTCAGAAAAGGCCATTaGATGGAGACAACGTGTGCG +
Preference number: 4 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPFRKGH*METTCA
Trigger: CGCACACGTTGTCTCCATCCAATGGCCTTTTCTGAA...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp TGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAACAAGGGCACCCCACTGAGTGGCGACTaGTCGAGTAGCAGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: WCARFVMFSTKTNPNKGTPLSGD*SSSSWS
Trigger: TGACCAACTGCTACTCGACCAGTCGCCACTCAGTGG...GGTGCCCTTGTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTGTGTCTAGGCCGGTTTaGGGCAGTGGGGAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: RQLMRKATGMILGIFKWCVSRPV*GSGERA
Trigger: GGCCCTCTCCCCACTGCCCCAAACCGGCCTAGACAC...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGGCCAAACCTTTCCGTaGACCTGGAAAACCTGCCAC +
Preference number: 4 (lower is better)
Translates to: STKNRGTSLNKANGEGLQGQTFP*TWKTCH
Trigger: GTGGCAGGTTTTCCAGGTCCACGGAAAGGTTTGGCC...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCACTCAGGACACGCGCTaGCTGCGGCCACAGCGCGCT +
Preference number: 4 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSTQDTR*LRPQRA
Trigger: AGCGCGCTGTGGCCGCAGCCAGCGCGTGTCCTGAGT...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS-3UTR TCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTAGGCACCGGGCTCGCTaGGCAGCAAGACGTGGATGT +
Preference number: 4 (lower is better)
Translates to: RQLMRKATGMILGIFKWCRHRAR*AARRGC
Trigger: ACATCCACGTCTTGCTGCTCAGCGAGCCCGGTGCCT...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTAAGAGAACTCTGCCGTaGCCGAGCCCAGCACCGAGC +
Preference number: 4 (lower is better)
Translates to: RQLMRKATGMILGIFKWCKRTLP*PSPAPS
Trigger: GCTCGGTGCTGGGCTCGGTCACGGCAGAGTTCTCTT...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAACACAAGGTCATTGTGTaGCTGACTCATGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: STKNRGTSLNKANGEGLQHKVIV*LTHAWV
Trigger: GACCCAGGCATGAGTCAGTCACACAATGACCTTGTG...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGCGTTTAAAGTGCTACTaGGGAATACAATCATTGTCA +
Preference number: 4 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTRLKCY*GIQSLS
Trigger: TGACAATGATTGTATTCCTCAGTAGCACTTTAAACG...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCTGTTTTTCGTCAGGGTaGTGGAGAACCTCTGAACAG +
Preference number: 4 (lower is better)
Translates to: GATLKLADVLPLPLLHKLCFSSG*WRTSEQ
Trigger: CTGTTCAGAGGTTCTCCAGCACCCTGACGAAAAACA...GAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR GCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTACATGTAAGAGAACTCTaGCGTGACCGAGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLHVREL*RDRAQH
Trigger: GTGCTGGGCTCGGTCACGGCAGAGTTCTCTTACATG...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR GCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTCGTCCTCCTGGTGGGTaGTGTCCACAGAGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: RQLMRKATGMILGIFKWCRPPGG*CPQRPC
Trigger: ACACGGCCTCTGTGGACAGCACCCACCAGGAGGACG...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCATGTGTGACTGACTCATaGCTGGGTCTTTCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPCVTDS*LGLSVD
Trigger: ATCAACAGAAAGACCCAGGCATGAGTCAGTCACACA...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTACCAGGAGGTGGAGGTTaGAGTAAGCTGCCATTGCAC +
Preference number: 4 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLPGGGG*SKLPLH
Trigger: GTGCAATGGCAGCTTACTGCAACCTCCACCTCCTGG...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCGATGGAGACAACGTGTaGGTGTCTACAGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASDGDNV*VSTGSR
Trigger: TCTGCTTCCTGTAGACACGCACACGTTGTCTCCATC...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCCGTGTGCAGGCTTGCTaGAGGGCTGTCTTCGGCGTT +
Preference number: 4 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPRVQAC*RAVFGV
Trigger: AACGCCGAAGACAGCCCTGCAGCAAGCCTGCACACG...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCCCACCCAAGCCCGTGTaGAGGCTTGCTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSPPKPV*RLAAGL
Trigger: CAGCCCTGCAGCAAGCCTGCACACGGGCTTGGGTGG...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCACTCTTCTCCTTCATGTaGAACTCCAGCTGTAAATGG +
Preference number: 4 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPLFSFM*NSSCKW
Trigger: CCATTTACAGCTGGAGTTCCACATGAAGGAGAAGAG...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CCA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGGCCACTTCAGCCACTaGATCCGAACCATTCAACAC +
Preference number: 4 (lower is better)
Translates to: STKNRGTSLNKANGEGLQGHFSH*IRTIQH
Trigger: GTGTTGAATGGTTCGGATCCAGTGGCTGAAGTGGCC...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTGATGGGGCGTCCTCCTaGTGGGTGCTGTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: RQLMRKATGMILGIFKWCDGASS*WVLSTE
Trigger: CTCTGTGGACAGCACCCACCAGGAGGACGCCCCATC...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCCCTCTCCGGATGGGATaGGGCGTCCTCCTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSPLRMG*GVLLVG
Trigger: ACCCACCAGGAGGACGCCCCATCCCATCCGGAGAGG...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTATCCGGCGGACACACTaGCTGCGTCCTGGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: RQLMRKATGMILGIFKWCIRRTH*LRPGEG
Trigger: ACCCTCACCAGGACGCAGCCAGTGTGTCCGCCGGAT...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATGACATGGTCCAGGCATaGACCCAAAACAACACTTGT +
Preference number: 4 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNDMVQA*TQNNTC
Trigger: ACAAGTGTTGTTTTGGGTCCATGCCTGGACCATGTC...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATCTCCTTTTTGTGACATaGTCCAGGCATGGACCCAAA +
Preference number: 4 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNLLFVT*SRHGPK
Trigger: TTTGGGTCCATGCCTGGACCATGTCACAAAAAGGAG...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp CACACTGGCTGCGTCCTGGTGAGGGTAGTTAACATGGGTGCACGTCTTCTGGCTTTAGGGATATTCAAATaGTGTGCCAGGTTTGTGATG +
Preference number: 4 (lower is better)
Translates to: HTGCVLVRVVNMGARLLALGIFK*CARFVM
Trigger: CATCACAAACCTGGCACACCATTTGAATATCCCTAA...AGCCAGAAGACGTGCACCCATGTTAACTACCCTCACCAGGACGCAGCCAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGGTTTTTACTCACCAGTaGCTCTATTACCCCCGAAAT +
Preference number: 4 (lower is better)
Translates to: IKSREITTQETPAFGGQQVFTHQ*LYYPRN
Trigger: ATTTCGGGGGTAATAGAGCCACTGGTGAGTAAAAAC...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCCAGAGCCCTAGACCTTaGTATTCAACAGTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GATLKLADVLPLPLLHKLQSPRP*YSTVSS
Trigger: GCTGCTTACTGTTGAATACCAAGGTCTAGGGCTCTG...GAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACCCACTGAGTGGCGACTaGTCGAGTAGCAGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: SPQATKACRRGEAIKVIYPLSGD*SSSSWS
Trigger: TGACCAACTGCTACTCGACCAGTCGCCACTCAGTGG...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CAA 72 bp GCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTaGCTTCATAAACTCCCTCCCATGTTGGTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: ATLKLADVLPLP*LHKLPPMLVFS
Trigger: AGAAAACACCAACATGGGAGGGAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCGCTTTGAAGATTCACTaGGCTGTCGAATGGCCACTT +
Preference number: 4 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASALKIH*AVEWPL
Trigger: AAGTGGCCATTCGACAGCTCAGTGAATCTTCAAAGC...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGACTCATGGAGCTCTCTaGCAGCTCATCACCGTCGGG +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMTHGAL*QLITVG
Trigger: CCCGACGGTGATGAGCTGTCAGAGAGCTCCATGAGT...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTACACAAGGTCATTGTGTaGCTGACTCATGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLHKVIV*LTHAWV
Trigger: GACCCAGGCATGAGTCAGTCACACAATGACCTTGTG...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCGCTCCTGACTTCATCTaGCAGGCCCGCTGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPAPDFI*QARCAL
Trigger: AAGAGCACAGCGGGCCTGTCAGATGAAGTCAGGAGC...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGGGCAGGAGAATCGCTTaGACCAGGAGGTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMGRRIA*TRRWRL
Trigger: CAACCTCCACCTCCTGGTTCAAGCGATTCTCCTGCC...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp TGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAACAAGGGCACCCCAGCCTCTGAAATCTaGAGGTGTAACTCCTTCGAC +
Preference number: 4 (lower is better)
Translates to: WCARFVMFSTKTNPNKGTPASEI*RCNSFD
Trigger: GTCGAAGGAGTTACACCTGCAGATTTCAGAGGCTGG...GGTGCCCTTGTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR GCA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACGACCTGGCTGCTCCATaGCGCGGCCTGTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHDLAAP*RGLWLL
Trigger: AAGGAGCCACAGGCCGCGGCATGGAGCAGCCAGGTC...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCCCGACGTGTTGCCTTTaGCTTTGCTTCATAAACTCC +
Preference number: 4 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASPTCCL*LCFINS
Trigger: GGAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGG...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGTACCCAGGAAACACCTaGCTTCGGTGGCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMYPGNT*LRWPAV
Trigger: CACTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTA...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAGTATTGTGTTTCGAATaGAAACGGTCATGGACCCAA +
Preference number: 4 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPVLCFE*KRSWTQ
Trigger: TTGGGTCCATGACCGTTTGCATTCGAAACACAATAC...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp TGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAACAAGGGCACCCTAAATGATGAATGGTaGGCTGCTGCCCAGCTGCTA +
Preference number: 4 (lower is better)
Translates to: WCARFVMFSTKTNPNKGTLNDEW*AAAQLL
Trigger: TAGCAGCTGGGCAGCAGCGCACCATTCATCATTTAG...GGTGCCCTTGTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACGCCCGTGTGCAGGCTTaGTGCAGGGCTGTCTTCGGC +
Preference number: 4 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHARVQA*CRAVFG
Trigger: GCCGAAGACAGCCCTGCAGCAAGCCTGCACACGGGC...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACCTGAGCAGCAAGACGTaGATGTTCCTCACCAGTAGC +
Preference number: 4 (lower is better)
Translates to: SPQATKACRRGEAIKVIYLSSKT*MFLTSS
Trigger: GCTACTGGTGAGGAACATCCACGTCTTGCTGCTCAG...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTACTGAGCAGCAAGACGTaGATGTTCCTCACCAGTAGC +
Preference number: 4 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLLSSKT*MFLTSS
Trigger: GCTACTGGTGAGGAACATCCACGTCTTGCTGCTCAG...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAGGGGCGTCCTCCTGGTaGGTGCTGTCCACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGGASSW*VLSTEA
Trigger: GGCCTCTGTGGACAGCACCCACCAGGAGGACGCCCC...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCGGGGCAAGGGATGCCTaGGCTGACTCGGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSGARDA*ADSASS
Trigger: AGAGGAAGCCGAGTCAGCCCAGGCATCCCTTGCCCC...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCTCTTGTTTCTGTGCCTaGAGAGCAGCTTCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: GATLKLADVLPLPLLHKLSCFCA*RAASCS
Trigger: TGAACAAGAAGCTGCTCTCCAGGCACAGAAACAAGA...GAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTGACAAGCGGGGCATCTaGACATCCGGCGGACACACT +
Preference number: 4 (lower is better)
Translates to: RQLMRKATGMILGIFKWCDKRGI*TSGGHT
Trigger: AGTGTGTCCGCCGGATGTCCAGATGCCCCGCTTGTC...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGTTAGGGATATTCAAATaGTGTGCCAGGTTTGTGATG +
Preference number: 4 (lower is better)
Translates to: IKSREITTQETPAFGGQQLGIFK*CARFVM
Trigger: CATCACAAACCTGGCACACCATTTGAATATCCCTAA...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGAAAGGACAGGAAAGGTaGGCCCCCTTTCCTCTCGGC +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMKGQER*APFPLG
Trigger: GCCGAGAGGAAAGGGGGCCCACCTTTCCTGTCCTTT...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380486.4
3UTR CAA 72 bp GCTACTGGCAGCACTTGGCAAAATCCATGTATGTGTTaGGTTACTGTGTTCTACGAGCGGTCACGTATGGCT +
Preference number: 4 (lower is better)
Translates to: ATGSTWQNPCMC*VTVFYERSRMA
Trigger: AGCCATACGTGACCGCTCGTAGAACACAGTAACCAAACACATACATGGATTTTGCCAAGTGCTGCCAGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CAA 72 bp CAGAGATACGTGTCCTGCCTTCCACCATCCACCAATTaGTACTCTGAAGTTTCCAGATCAAGAGCCGTGAGA +
Preference number: 4 (lower is better)
Translates to: QRYVSCLPPSTN*YSEVSRSRAVR
Trigger: TCTCACGGCTCTTGATCTGGAAACTTCAGAGTACAAATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACGCTTCAAGATGTCCTTaGGAACGTCAGACATCGCAC +
Preference number: 4 (lower is better)
Translates to: SPQATKACRRGEAIKVIYASRCP*ERQTSH
Trigger: GTGCGATGTCTGACGTTCTCAAGGACATCTTGAAGC...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACACCCGCTGGTCAGCGTaGAGCTCTGTGGCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHTRWSA*SSVAQK
Trigger: CTTCTGGGCCACAGAGCTTCACGCTGACCAGCGGGT...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCTCTTCCGTGGCGACTTaGGTTTCAGCTTTGAAGATT +
Preference number: 4 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASSSVAT*VSALKI
Trigger: AATCTTCAAAGCTGAAACTCAAGTCGCCACGGAAGA...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGGGCACCTCCTTTTTGTaGCATGGTCCAGGCATGGAC +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMGTSFL*HGPGMD
Trigger: GTCCATGCCTGGACCATGTCACAAAAAGGAGGTGCC...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTAATTCCAAGCAGCAGATaGAGAGAGGTGACCCATCCT +
Preference number: 4 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLIPSSR*REVTHP
Trigger: AGGATGGGTCACCTCTCTTCATCTGCTGCTTGGAAT...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACGGACCCAAGTTAACCTaGGTTTGCTCTGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: SPQATKACRRGEAIKVIYGPKLT*VCSAGF
Trigger: GAATCCTGCAGAGCAAACTCAGGTTAACTTGGGTCC...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTACCAGCCTCTGAAATCTaGAGGTGTAACTCCTTCGAC +
Preference number: 4 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLPASEI*RCNSFD
Trigger: GTCGAAGGAGTTACACCTGCAGATTTCAGAGGCTGG...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR GCA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCTGTGGCCCAGAAGGCTaGTTCTTAAATAAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASCGPEG*FLNKSR
Trigger: TCTGGACTTATTTAAGAAGCAGCCTTCTGGGCCACA...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR GCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATACCCTGGATGTCAACTaGTCCACTAGCATTATTAGA +
Preference number: 4 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNTLDVN*STSIIR
Trigger: TCTAATAATGCTAGTGGAGCAGTTGACATCCAGGGT...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCACCCTGGATGTCAACTaGTCCACTAGCATTATTAGA +
Preference number: 4 (lower is better)
Translates to: GATLKLADVLPLPLLHKLTLDVN*STSIIR
Trigger: TCTAATAATGCTAGTGGAGCAGTTGACATCCAGGGT...GAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp TGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAACAAGGGCACCCCGACGTGTTGCCTTTaGCTTTGCTTCATAAACTCC +
Preference number: 4 (lower is better)
Translates to: WCARFVMFSTKTNPNKGTPTCCL*LCFINS
Trigger: GGAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGG...GGTGCCCTTGTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTACAGAGATACGTGTCCTaGCTTCCACCATCCACCAAT +
Preference number: 4 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLQRYVS*LPPSTN
Trigger: ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTG...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTAACCTGAGTTTGCTCTaGAGGATTCCGCGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: RQLMRKATGMILGIFKWCNLSLL*RIPRGP
Trigger: AGGCCCCCGCGGAATCCTGCAGAGCAAACTCAGGTT...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCATGGACCTGGAAAACCTaGCACTTTCTTCTCTTTTTA +
Preference number: 4 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPWTWKT*HFLLFL
Trigger: TAAAAAGAGAAGAAAGTGGCAGGTTTTCCAGGTCCA...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAGCCCGTGTGCAGGCTTaGTGCAGGGCTGTCTTCGGC +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGARVQA*CRAVFG
Trigger: GCCGAAGACAGCCCTGCAGCAAGCCTGCACACGGGC...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGACCACCCAAGCCCGTGTaGAGGCTTGCTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGPPKPV*RLAAGL
Trigger: CAGCCCTGCAGCAAGCCTGCACACGGGCTTGGGTGG...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTCTTGTCTCAGCCACCTaGTCCTCCCCCAGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: RQLMRKATGMILGIFKWCLVSAT*SSPSAL
Trigger: CAAAGCACTGGGGGAGGACCAGGTGGCTGAGACAAG...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CCA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAATTTTCGTCAGGGTGCTaGAGAACCTCTGAACAGGAT +
Preference number: 4 (lower is better)
Translates to: STKNRGTSLNKANGEGLQFSSGC*RTSEQD
Trigger: ATCCTGTTCAGAGGTTCTCCAGCACCCTGACGAAAA...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CCA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACGCTCCAAGACACTCATaGAGCTCTCTGACAGCTCAT +
Preference number: 4 (lower is better)
Translates to: SPQATKACRRGEAIKVIYAPRHS*SSLTAH
Trigger: ATGAGCTGTCAGAGAGCTCCATGAGTGTCTTGGAGC...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGTGGGTGCACGTCTTCTaGCTTGGAGGTGATGACCTC +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMWVHVF*LGGDDL
Trigger: GAGGTCATCACCTCCAAGCCAGAAGACGTGCACCCA...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp TGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAACAAGGGCACCCAGAGCCCTAGACCTTaGTATTCAACAGTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: WCARFVMFSTKTNPNKGTQSPRP*YSTVSS
Trigger: GCTGCTTACTGTTGAATACCAAGGTCTAGGGCTCTG...GGTGCCCTTGTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAGTGTCTAGGCCGGTTTaGGGCAGTGGGGAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGVSRPV*GSGERA
Trigger: GGCCCTCTCCCCACTGCCCCAAACCGGCCTAGACAC...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGGGCCAAACCTTTCCGTaGACCTGGAAAACCTGCCAC +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMGQTFP*TWKTCH
Trigger: GTGGCAGGTTTTCCAGGTCCACGGAAAGGTTTGGCC...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGATCAGGGCAGCGTCGTaGTCCTTGGAGATCCCTGAT +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMIRAAS*SLEIPD
Trigger: ATCAGGGATCTCCAAGGACCACGACGCTGCCCTGAT...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449165.5
CDS-3UTR TCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGAGTAGCTTCAGCTCGTaGGCCCTTGGAGGTTTAGGA +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMSSFSS*ALGGLG
Trigger: TCCTAAACCTCCAAGGGCTCACGAGCTGAAGCTACT...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACGCTTTGAAGATTCACTaGGCTGTCGAATGGCCACTT +
Preference number: 4 (lower is better)
Translates to: SPQATKACRRGEAIKVIYALKIH*AVEWPL
Trigger: AAGTGGCCATTCGACAGCTCAGTGAATCTTCAAAGC...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATGGTCTTGGAGATCCCTaGTATGATAATAGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNGLGDP*YDNSAF
Trigger: AAAAGCACTATTATCATATCAGGGATCTCCAAGACC...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAAATATCAAAGGTAGATaGCTTCCTACATCTGTCGTA +
Preference number: 4 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPNIKGR*LPTSVV
Trigger: TACGACAGATGTAGGAAGTCATCTACCTTTGATATT...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATTTCACAGCAAAATTCTaGAGCGCTCATAGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNFTAKF*SAHRRN
Trigger: ATTCCTTCTATGAGCGCTTCAGAATTTTGCTGTGAA...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGGTGTGCCAGGTTTGTaGTGTTTTCCACCAAAACAA +
Preference number: 4 (lower is better)
Translates to: STKNRGTSLNKANGEGLQGVPGL*CFPPKQ
Trigger: TTGTTTTGGTGGAAAACATCACAAACCTGGCACACC...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCTCATTAAAACCAACATaGGCACCCAGTTCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASSLKPT*APSSRD
Trigger: ATCTCTGGAACTGGGTGCTCATGTTGGTTTTAATGA...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCTGCCCAGCTGCTAACTaGGAGAACGAGGCAGTGTAT +
Preference number: 4 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPCPAAN*ENEAVY
Trigger: ATACACTGCCTCGTTCTCTCAGTTAGCAGCTGGGCA...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCAGAACCAGCCAAATaGTTCAAGATGTCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: STKNRGTSLNKANGEGLQAEPAK*FKMSLR
Trigger: TCTCAAGGACATCTTGAAGCATTTGGCTGGTTCTGC...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR GCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTCATGTAAGAGAACTCTaGCGTGACCGAGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: RQLMRKATGMILGIFKWCHVREL*RDRAQH
Trigger: GTGCTGGGCTCGGTCACGGCAGAGTTCTCTTACATG...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR GCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTACACAGGGCATCACCGTaGGGTCCTTTTCTATTTTTG +
Preference number: 4 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLHRASP*GPFLFL
Trigger: CAAAAATAGAAAAGGACCGCACGGTGATGCCCTGTG...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR GCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGACGTCCTCCTGGTGGGTaGTGTCCACAGAGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGRPPGG*CPQRPC
Trigger: ACACGGCCTCTGTGGACAGCACCCACCAGGAGGACG...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAACAAACGGGGAAGGGTTaGAAGCTCATTAAAACCAAC +
Preference number: 4 (lower is better)
Translates to: STKNRGTSLNKANGEGLQQTGKG*KLIKTN
Trigger: GTTGGTTTTAATGAGCTTGCAACCCTTCCCCGTTTG...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCAACCTGAGTTTGCTCTaGAGGATTCCGCGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSNLSLL*RIPRGP
Trigger: AGGCCCCCGCGGAATCCTGCAGAGCAAACTCAGGTT...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTCGGGGGCACCGTTCATaGTGTTCTTGTTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: RQLMRKATGMILGIFKWCRGHRS*CSCFCA
Trigger: GGCACAGAAACAAGAACACCATGAACGGTGCCCCCG...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTTGGGTGCACGTCTTCTaGCTTGGAGGTGATGACCTC +
Preference number: 4 (lower is better)
Translates to: RQLMRKATGMILGIFKWCWVHVF*LGGDDL
Trigger: GAGGTCATCACCTCCAAGCCAGAAGACGTGCACCCA...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAATCCGGCGGACACACTaGCTGCGTCCTGGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGIRRTH*LRPGEG
Trigger: ACCCTCACCAGGACGCAGCCAGTGTGTCCGCCGGAT...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCCTGGGAGAAGCCTCCTaGCTGGAGACTCAGATTTTG +
Preference number: 4 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPLGEAS*LETQIL
Trigger: CAAAATCTGAGTCTCCAGCCAGGAGGCTTCTCCCAG...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCACGAGCGGTCACGTATaGCTCCTGACTTCATCTGAC +
Preference number: 4 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPTSGHV*LLTSSD
Trigger: GTCAGATGAAGTCAGGAGCCATACGTGACCGCTCGT...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCGCTGGAACAAGGAGATaGCTACTTTTTGTTATTGCT +
Preference number: 4 (lower is better)
Translates to: GATLKLADVLPLPLLHKLAGTRR*LLFVIA
Trigger: AGCAATAACAAAAAGTAGCCATCTCCTTGTTCCAGC...GAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAGCCTAAATGATGAATaGTGCGCTGCTGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPSLNDE*CAAAQL
Trigger: CAGCTGGGCAGCAGCGCACCATTCATCATTTAGGCT...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTAACCTTTCCGTGGACCTaGAAAACCTGCCACTTTCTT +
Preference number: 4 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLTFPWT*KTCHFL
Trigger: AAGAAAGTGGCAGGTTTTCCAGGTCCACGGAAAGGT...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
3UTR CAA 72 bp CTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTaGACCAGCATGTCTACTGGAAGTGGCACATTCAGA +
Preference number: 4 (lower is better)
Translates to: LSRTLHPNDDCS*TSMSTGSGTFR
Trigger: TCTGAATGTGCCACTTCCAGTAGACATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCCGATCACCTTCACCTTaGTGGGAGTCTTCACCGGAG +
Preference number: 4 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSRSPSP*WESSPE
Trigger: CTCCGGTGAAGACTCCCATCAAGGTGAAGGTGATCG...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACCTTGAGTTTCAGCTTTaGAGATTCACTGAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: SPQATKACRRGEAIKVIYLEFQL*RFTELS
Trigger: CGACAGCTCAGTGAATCTTCAAAGCTGAAACTCAAG...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGAGGTCATTGTGTGACTaGCTCATGCCTGGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMRSLCD*LMPGSF
Trigger: GAAAGACCCAGGCATGAGTCAGTCACACAATGACCT...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGGCAGATGAAGAGAGGTaGCCCATCCTTTCCATTCAC +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMADEER*PILSIH
Trigger: GTGAATGGAAAGGATGGGTCACCTCTCTTCATCTGC...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCGCAGATGAAGAGAGGTaGCCCATCCTTTCCATTCAC +
Preference number: 4 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPADEER*PILSIH
Trigger: GTGAATGGAAAGGATGGGTCACCTCTCTTCATCTGC...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGATTCCAAGCAGCAGATaGAGAGAGGTGACCCATCCT +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMIPSSR*REVTHP
Trigger: AGGATGGGTCACCTCTCTTCATCTGCTGCTTGGAAT...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTAATGATGACTGCTCTTTaGCCAGCATGTCTACTGGAA +
Preference number: 4 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLMMTAL*PACLLE
Trigger: TTCCAGTAGACATGCTGGTCAAAGAGCAGTCATCAT...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATAGTAAAACATTAAAGTaGACATCTGTCCCATCTGTC +
Preference number: 4 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNSKTLK*TSVPSV
Trigger: GACAGATGGGACAGATGTTCACTTTAATGTTTTACT...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCACAGGATCGTTCAGCTaGACGACGCACACTGCATTA +
Preference number: 4 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPTGSFS*TTHTAL
Trigger: TAATGCAGTGTGCGTCGTGCAGCTGAACGATCCTGT...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR GCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTATGTGGCCCAGAAGGCTaGTTCTTAAATAAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLCGPEG*FLNKSR
Trigger: TCTGGACTTATTTAAGAAGCAGCCTTCTGGGCCACA...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR GCA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCTATGCTTTTTGGCAGTaGCCGGCTCCAAGACACTCA +
Preference number: 4 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPYAFWQ*PAPRHS
Trigger: TGAGTGTCTTGGAGCCGGGCACTGCCAAAAAGCATA...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCGATGGAGACAACGTGTaGGTGTCTACAGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPDGDNV*VSTGSR
Trigger: TCTGCTTCCTGTAGACACGCACACGTTGTCTCCATC...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGAACTCCAGCTGTAAATaGAAAGGGGAGAGCCGCATG +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMNSSCK*KGESRM
Trigger: CATGCGGCTCTCCCCTTTCCATTTACAGCTGGAGTT...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CCA 90 bp TGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAACAAGGGCACCAAAAAGACTTTGTTTTaGCTACTGGCAGCACTTGGC +
Preference number: 4 (lower is better)
Translates to: WCARFVMFSTKTNPNKGTKKTLF*LLAALG
Trigger: GCCAAGTGCTGCCAGTAGCCAAAACAAAGTCTTTTT...GGTGCCCTTGTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGTTTTTACTCACCAGTaGCTCTATTACCCCCGAAAT +
Preference number: 4 (lower is better)
Translates to: STKNRGTSLNKANGEGLQVFTHQ*LYYPRN
Trigger: ATTTCGGGGGTAATAGAGCCACTGGTGAGTAAAAAC...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACCTGTGCAGGCTGCTTTaGTCTTCGTGTCTAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHLCRLL*SSCLGR
Trigger: CCGGCCTAGACACGAAGACCAAAGCAGCCTGCACAG...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGATCGCTGACCAAGAACTaGATAGCCTGGCCCACCACG +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGSLTKN*IAWPTT
Trigger: CGTGGTGGGCCAGGCTATTCAGTTCTTGGTCAGCGA...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTCCAGATCAAGAGCCGTaGGATTACTACCCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: RQLMRKATGMILGIFKWCPDQEP*DYYPGN
Trigger: GTTTCCTGGGTAGTAATCTCACGGCTCTTGATCTGG...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCCTGGTCCTCCCCCAGTaGTTTGGGCTGGATATTAAC +
Preference number: 4 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSLVLPQ*FGLDIN
Trigger: GTTAATATCCAGCCCAAAGCACTGGGGGAGGACCAG...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR GCA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAGAATTCCTCCTTTATaGTTTTTGGCAGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPRIPPL*FLAVPG
Trigger: GCCGGGCACTGCCAAAAAGCATAAAGGAGGAATTCT...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGACGGGAACCCTCTGGCTaGTCCAGGAACACAAGGTCA +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGREPSG*SRNTRS
Trigger: TGACCTTGTGTTCCTGGAGCAGCCAGAGGGTTCCCG...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACATAGAAGGAATGTCCTaGGAGTTTGGCCCATTTGTT +
Preference number: 4 (lower is better)
Translates to: SPQATKACRRGEAIKVIYIEGMS*EFGPFV
Trigger: AACAAATGGGCCAAACTCGCAGGACATTCCTTCTAT...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACGCCCATTTCTCACGGTaGTACCCTGAAGCTAGCCGA +
Preference number: 4 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHAHFSR*YPEASR
Trigger: TCGGCTAGCTTCAGGGTAGCACCGTGAGAAATGGGC...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTCAGAGATACGTGTCCTaGCTTCCACCATCCACCAAT +
Preference number: 4 (lower is better)
Translates to: RQLMRKATGMILGIFKWCQRYVS*LPPSTN
Trigger: ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTG...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACTGGGTGCACGTCTTCTaGCTTGGAGGTGATGACCTC +
Preference number: 4 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHWVHVF*LGGDDL
Trigger: GAGGTCATCACCTCCAAGCCAGAAGACGTGCACCCA...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCGACATGGTCCAGGCATaGACCCAAAACAACACTTGT +
Preference number: 4 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPDMVQA*TQNNTC
Trigger: ACAAGTGTTGTTTTGGGTCCATGCCTGGACCATGTC...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTAAAAAAGACTTTGTTTTaGCTACTGGCAGCACTTGGC +
Preference number: 4 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLKKTLF*LLAALG
Trigger: GCCAAGTGCTGCCAGTAGCCAAAACAAAGTCTTTTT...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGCAGAGCCCTAGACCTTaGTATTCAACAGTAAGCAGC +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMQSPRP*YSTVSS
Trigger: GCTGCTTACTGTTGAATACCAAGGTCTAGGGCTCTG...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTGAAAAGGCCATTGGATaGAGACAACGTGTGCGTGTC +
Preference number: 4 (lower is better)
Translates to: RQLMRKATGMILGIFKWCEKAIG*RQRVRV
Trigger: GACACGCACACGTTGTCTCCATCCAATGGCCTTTTC...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCTGGAACAAGGAGATaGCTACTTTTTGTTATTGCT +
Preference number: 4 (lower is better)
Translates to: STKNRGTSLNKANGEGLQAGTRR*LLFVIA
Trigger: AGCAATAACAAAAAGTAGCCATCTCCTTGTTCCAGC...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCGCTTCAAGATGTCCTTaGGAACGTCAGACATCGCAC +
Preference number: 4 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSASRCP*ERQTSH
Trigger: GTGCGATGTCTGACGTTCTCAAGGACATCTTGAAGC...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCATTCCAAGCAGCAGATaGAGAGAGGTGACCCATCCT +
Preference number: 4 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSIPSSR*REVTHP
Trigger: AGGATGGGTCACCTCTCTTCATCTGCTGCTTGGAAT...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGATGATGACTGCTCTTTaGCCAGCATGTCTACTGGAA +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMMMTAL*PACLLE
Trigger: TTCCAGTAGACATGCTGGTCAAAGAGCAGTCATCAT...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCACTAACAGTGATGCCTaGCTTTGGGGACAGAAACTT +
Preference number: 4 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPTNSDA*LWGQKL
Trigger: AAGTTTCTGTCCCCAAAGTCAGGCATCACTGTTAGT...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAAGTAAAACATTAAAGTaGACATCTGTCCCATCTGTC +
Preference number: 4 (lower is better)
Translates to: STKNRGTSLNKANGEGLQSKTLK*TSVPSV
Trigger: GACAGATGGGACAGATGTTCACTTTAATGTTTTACT...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTGTGTTCTTGTTTCTGTaGCTGGAGAGCAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: RQLMRKATGMILGIFKWCVFLFL*LESSFL
Trigger: CAAGAAGCTGCTCTCCAGGCACAGAAACAAGAACAC...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp TGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAACAAGGGCACCGATATTCAAATGGTGTaGCAGGTTTGTGATGTTTTC +
Preference number: 4 (lower is better)
Translates to: WCARFVMFSTKTNPNKGTDIQMV*QVCDVF
Trigger: GAAAACATCACAAACCTGGCACACCATTTGAATATC...GGTGCCCTTGTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGACCAGGAGGTGGAGGTTaGAGTAAGCTGCCATTGCAC +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGPGGGG*SKLPLH
Trigger: GTGCAATGGCAGCTTACTGCAACCTCCACCTCCTGG...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCCTAAATGATGAATGGTaGGCTGCTGCCCAGCTGCTA +
Preference number: 4 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSLNDEW*AAAQLL
Trigger: TAGCAGCTGGGCAGCAGCGCACCATTCATCATTTAG...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGAGTGCTTTTCTTCCGTaGCGACTTGAGTTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMSAFLP*RLEFQL
Trigger: AAGCTGAAACTCAAGTCGCCACGGAAGAAAAGCACT...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CCA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCCTCCTTTATGCTTTTTaGCAGTGCCCGGCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSLLYAF*QCPAPR
Trigger: TCTTGGAGCCGGGCACTGCCAAAAAGCATAAAGGAG...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGACGGGGGCACCGTTCATaGTGTTCTTGTTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGRGHRS*CSCFCA
Trigger: GGCACAGAAACAAGAACACCATGAACGGTGCCCCCG...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGGAATGCAAACGGTCATaGACCCAAGTTAACCTGAGT +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMECKRS*TQVNLS
Trigger: ACTCAGGTTAACTTGGGTCCATGACCGTTTGCATTC...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTTCTTCCGTGGCGACTTaGGTTTCAGCTTTGAAGATT +
Preference number: 4 (lower is better)
Translates to: RQLMRKATGMILGIFKWCSSVAT*VSALKI
Trigger: AATCTTCAAAGCTGAAACTCAAGTCGCCACGGAAGA...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTACTAACAGTGATGCCTaGCTTTGGGGACAGAAACTT +
Preference number: 4 (lower is better)
Translates to: RQLMRKATGMILGIFKWCTNSDA*LWGQKL
Trigger: AAGTTTCTGTCCCCAAAGTCAGGCATCACTGTTAGT...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGTCATTAAAACCAACATaGGCACCCAGTTCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMSLKPT*APSSRD
Trigger: ATCTCTGGAACTGGGTGCTCATGTTGGTTTTAATGA...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGCACCAATTTGTACTCTaGAGTTTCCAGATCAAGAGC +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMHQFVL*SFQIKS
Trigger: GCTCTTGATCTGGAAACTTCAGAGTACAAATTGGTG...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGATGCCCAGCTGCTAACTaGGAGAACGAGGCAGTGTAT +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGCPAAN*ENEAVY
Trigger: ATACACTGCCTCGTTCTCTCAGTTAGCAGCTGGGCA...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTAAGTTACTCCAGATTTTaGTACTGTTCACCAACAAGA +
Preference number: 4 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLSYSRF*YCSPTR
Trigger: TCTTGTTGGTGAACAGTAGCAAAATCTGGAGTAACT...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329623.11
CDS-3UTR GCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTTGTGTGACTGACTCATaGCTGGGTCTTTCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: RQLMRKATGMILGIFKWCCVTDS*LGLSVD
Trigger: ATCAACAGAAAGACCCAGGCATGAGTCAGTCACACA...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGACCCTGGATGTCAACTaGTCCACTAGCATTATTAGA +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMTLDVN*STSIIR
Trigger: TCTAATAATGCTAGTGGAGCAGTTGACATCCAGGGT...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACGATATTCAAATGGTGTaGCAGGTTTGTGATGTTTTC +
Preference number: 4 (lower is better)
Translates to: SPQATKACRRGEAIKVIYDIQMV*QVCDVF
Trigger: GAAAACATCACAAACCTGGCACACCATTTGAATATC...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACGCTCCAAGACACTCATaGAGCTCTCTGACAGCTCAT +
Preference number: 4 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHAPRHS*SSLTAH
Trigger: ATGAGCTGTCAGAGAGCTCCATGAGTGTCTTGGAGC...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGGTCTCATTTAGCATCTaGTGGCAAGTTGGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMVSFSI*WQVGLF
Trigger: AAAAAGCCCAACTTGCCACCAGATGCTAAATGAGAC...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAAAAGACTTTGTTTTaGCTACTGGCAGCACTTGGC +
Preference number: 4 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPKKTLF*LLAALG
Trigger: GCCAAGTGCTGCCAGTAGCCAAAACAAAGTCTTTTT...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTAGATGAGGAAAGCGACTaGAATGATATTAGGGATATT +
Preference number: 4 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLDEESD*NDIRDI
Trigger: AATATCCCTAATATCATTCCAGTCGCTTTCCTCATC...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAAGCCTAAATGATGAATaGTGCGCTGCTGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGSLNDE*CAAAQL
Trigger: CAGCTGGGCAGCAGCGCACCATTCATCATTTAGGCT...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCGGTGTGCCAGGTTTGTaGTGTTTTCCACCAAAACAA +
Preference number: 4 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSGVPGL*CFPPKQ
Trigger: TTGTTTTGGTGGAAAACATCACAAACCTGGCACACC...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACTGTTTTTCGTCAGGGTaGTGGAGAACCTCTGAACAG +
Preference number: 4 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHCFSSG*WRTSEQ
Trigger: CTGTTCAGAGGTTCTCCAGCACCCTGACGAAAAACA...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR GCA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACCACAGGGCATCACCGTaGGGTCCTTTTCTATTTTTG +
Preference number: 4 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHHRASP*GPFLFL
Trigger: CAAAAATAGAAAAGGACCGCACGGTGATGCCCTGTG...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR GCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAGATGGAGACAACGTGTaGGTGTCTACAGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGDGDNV*VSTGSR
Trigger: TCTGCTTCCTGTAGACACGCACACGTTGTCTCCATC...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTGTATTGTGTTTCGAATaGAAACGGTCATGGACCCAA +
Preference number: 4 (lower is better)
Translates to: RQLMRKATGMILGIFKWCVLCFE*KRSWTQ
Trigger: TTGGGTCCATGACCGTTTGCATTCGAAACACAATAC...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGACCCAGTGCTTTGGGCTaGATATTAACGGCCATTTCC +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGPSALG*ILTAIS
Trigger: GGAAATGGCCGTTAATATCCAGCCCAAAGCACTGGG...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CCA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACTTTTCGTCAGGGTGCTaGAGAACCTCTGAACAGGAT +
Preference number: 4 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHFSSGC*RTSEQD
Trigger: ATCCTGTTCAGAGGTTCTCCAGCACCCTGACGAAAA...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAGCTCCAAGACACTCATaGAGCTCTCTGACAGCTCAT +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGAPRHS*SSLTAH
Trigger: ATGAGCTGTCAGAGAGCTCCATGAGTGTCTTGGAGC...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTGTCTCATTTAGCATCTaGTGGCAAGTTGGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: RQLMRKATGMILGIFKWCVSFSI*WQVGLF
Trigger: AAAAAGCCCAACTTGCCACCAGATGCTAAATGAGAC...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCGAATGCAAACGGTCATaGACCCAAGTTAACCTGAGT +
Preference number: 4 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSECKRS*TQVNLS
Trigger: ACTCAGGTTAACTTGGGTCCATGACCGTTTGCATTC...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAGTAAAACATTAAAGTaGACATCTGTCCCATCTGTC +
Preference number: 4 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPSKTLK*TSVPSV
Trigger: GACAGATGGGACAGATGTTCACTTTAATGTTTTACT...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGCGTTTAAAGTGCTACTaGGGAATACAATCATTGTCA +
Preference number: 4 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMRLKCY*GIQSLS
Trigger: TGACAATGATTGTATTCCTCAGTAGCACTTTAAACG...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAGTGTTCTTGTTTCTGTaGCTGGAGAGCAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGVFLFL*LESSFL
Trigger: CAAGAAGCTGCTCTCCAGGCACAGAAACAAGAACAC...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGACCGACGTGTTGCCTTTaGCTTTGCTTCATAAACTCC +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGPTCCL*LCFINS
Trigger: GGAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGG...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACGCTACTGGCAGCACTTaGCAAAATCCATGTATGTGT +
Preference number: 4 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHATGST*QNPCMC
Trigger: ACACATACATGGATTTTGCCAAGTGCTGCCAGTAGC...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCGTTTTTACTCACCAGTaGCTCTATTACCCCCGAAAT +
Preference number: 4 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSVFTHQ*LYYPRN
Trigger: ATTTCGGGGGTAATAGAGCCACTGGTGAGTAAAAAC...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAACCTTTCCGTGGACCTaGAAAACCTGCCACTTTCTT +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGTFPWT*KTCHFL
Trigger: AAGAAAGTGGCAGGTTTTCCAGGTCCACGGAAAGGT...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGACTTGAGTTTCAGCTTTaGAGATTCACTGAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGLEFQL*RFTELS
Trigger: CGACAGCTCAGTGAATCTTCAAAGCTGAAACTCAAG...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCTTCACAGCAAAATTCTaGAGCGCTCATAGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSFTAKF*SAHRRN
Trigger: ATTCCTTCTATGAGCGCTTCAGAATTTTGCTGTGAA...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAGGTGTGCCAGGTTTGTaGTGTTTTCCACCAAAACAA +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGGVPGL*CFPPKQ
Trigger: TTGTTTTGGTGGAAAACATCACAAACCTGGCACACC...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAACTAACAGTGATGCCTaGCTTTGGGGACAGAAACTT +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGTNSDA*LWGQKL
Trigger: AAGTTTCTGTCCCCAAAGTCAGGCATCACTGTTAGT...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGATCTTGTTTCTGTGCCTaGAGAGCAGCTTCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGSCFCA*RAASCS
Trigger: TGAACAAGAAGCTGCTCTCCAGGCACAGAAACAAGA...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAGCTACTGGCAGCACTTaGCAAAATCCATGTATGTGT +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGATGST*QNPCMC
Trigger: ACACATACATGGATTTTGCCAAGTGCTGCCAGTAGC...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCAATATCAAAGGTAGATaGCTTCCTACATCTGTCGTA +
Preference number: 4 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSNIKGR*LPTSVV
Trigger: TACGACAGATGTAGGAAGTCATCTACCTTTGATATT...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACTGGACCTGGAAAACCTaGCACTTTCTTCTCTTTTTA +
Preference number: 4 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHWTWKT*HFLLFL
Trigger: TAAAAAGAGAAGAAAGTGGCAGGTTTTCCAGGTCCA...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAGGTCTTGGAGATCCCTaGTATGATAATAGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGGLGDP*YDNSAF
Trigger: AAAAGCACTATTATCATATCAGGGATCTCCAAGACC...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR TCA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAATATCAAAGGTAGATaGCTTCCTACATCTGTCGTA +
Preference number: 4 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHNIKGR*LPTSVV
Trigger: TACGACAGATGTAGGAAGTCATCTACCTTTGATATT...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR TCA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACCGTTTAAAGTGCTACTaGGGAATACAATCATTGTCA +
Preference number: 4 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHRLKCY*GIQSLS
Trigger: TGACAATGATTGTATTCCTCAGTAGCACTTTAAACG...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR GCA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAGATATTCAAATGGTGTaGCAGGTTTGTGATGTTTTC +
Preference number: 4 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGDIQMV*QVCDVF
Trigger: GAAAACATCACAAACCTGGCACACCATTTGAATATC...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS GCA 90 bp ACCGCCCGCCGCTGGGGCTGGGGTCGCGCCCTGGCCAGCGCCCACTaGGCCAGGTACAGGCCTACCGTGGCCAGGGCCGCGACGAAGAGC +
Preference number: 5 (lower is better)
Translates to: TARRWGWGRALASAH*ARYRPTVARAATKS
Trigger: GCTCTTCGTCGCGGCCCTGGCCACGGTAGGCCTGTACCTGGCGCAGTGGGCGCTGGCCAGGGCGCGACCCCAGCCCCAGCGGCGGGCGGT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS CCA 90 bp CCTCTCCAGGCTCCACCGCCCGCCGCTGGGGCTGGGGTCGCGCCCTaGCCAGCGCCCACTGCGCCAGGTACAGGCCTACCGTGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: PLQAPPPAAGAGVAP*PAPTAPGTGLPWPG
Trigger: CCCTGGCCACGGTAGGCCTGTACCTGGCGCAGTGGGCGCTGGCCAGGGCGCGACCCCAGCCCCAGCGGCGGGCGGTGGAGCCTGGAGAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS GCA 90 bp ACCGTGGCCAGGGCCGCGACGAAGAGCGACACCAGCGCGAGCCACTaGGCCTCCCCGAGCCACGAGCCCAGCCGGGCCATGGCCATGGCG +
Preference number: 5 (lower is better)
Translates to: TVARAATKSDTSASH*ASPSHEPSRAMAMA
Trigger: CGCCATGGCCATGGCCCGGCTGGGCTCGTGGCTCGGGGAGGCGCAGTGGCTCGCGCTGGTGTCGCTCTTCGTCGCGGCCCTGGCCACGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS CCA 90 bp GTCGCGCCCTGGCCAGCGCCCACTGCGCCAGGTACAGGCCTACCGTaGCCAGGGCCGCGACGAAGAGCGACACCAGCGCGAGCCACTGCG +
Preference number: 5 (lower is better)
Translates to: VAPWPAPTAPGTGLP*PGPRRRATPARATA
Trigger: CGCAGTGGCTCGCGCTGGTGTCGCTCTTCGTCGCGGCCCTGGCCACGGTAGGCCTGTACCTGGCGCAGTGGGCGCTGGCCAGGGCGCGAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS GCA 90 bp CGTTCAGGGCGGTCACCCAGGCCGCCTGCCACTGGCTCCTCCAGCTaGCCAGCGTCAGGATCCAGGAGAGCAGCGCGTCGGACCCCGGGC +
Preference number: 5 (lower is better)
Translates to: RSGRSPRPPATGSSS*PASGSRRAARRTPG
Trigger: GCCCGGGGTCCGACGCGCTGCTCTCCTGGATCCTGACGCTGGGCAGCTGGAGGAGCCAGTGGCAGGCGGCCTGGGTGACCGCCCTGAACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380486.4
ENST00000478372.1
CDS CCA 90 bp CTCTCGGCCTCCTCGTTCAGGGCGGTCACCCAGGCCGCCTGCCACTaGCTCCTCCAGCTGCCCAGCGTCAGGATCCAGGAGAGCAGCGCG +
Preference number: 5 (lower is better)
Translates to: LSASSFRAVTQAACH*LLQLPSVRIQESSA
Trigger: CGCGCTGCTCTCCTGGATCCTGACGCTGGGCAGCTGGAGGAGCCAGTGGCAGGCGGCCTGGGTGACCGCCCTGAACGAGGAGGCCGAGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380486.4
ENST00000478372.1
CDS GCA 90 bp AGGCTGCCGCCCTCTCCGGATGGGATGGGGCGTCCTCCTGGTGGGTaGTGTCCACAGAGGCCGTGTAGCCCTGCATCAGGGCAGCGTCGT +
Preference number: 5 (lower is better)
Translates to: RLPPSPDGMGRPPGG*CPQRPCSPASGQRR
Trigger: ACGACGCTGCCCTGATGCAGGGCTACACGGCCTCTGTGGACAGCACCCACCAGGAGGACGCCCCATCCCATCCGGAGAGGGCGGCAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
ENST00000482084.5
ENST00000482186.5
CDS GCA 90 bp ACCACCACCTTCTCCTCCGCCGACCTGAGCACGCTGGAGACCTCCTaGACCACCAGCTCCAGTGCCTGCTGCCGCGGGTCCTCCTCAAAG +
Preference number: 5 (lower is better)
Translates to: TTTFSSADLSTLETS*TTSSSACCRGSSSK
Trigger: CTTTGAGGAGGACCCGCGGCAGCAGGCACTGGAGCTGGTGGTGCAGGAGGTCTCCAGCGTGCTCAGGTCGGCGGAGGAGAAGGTGGTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS GCA 90 bp AGGTACTGGCTGGCGCGGATGAGCACTTCTGACGGTCCCTCCAACTaGCAGCCTGTCCCTCGCGGAGCCCAGGGCCTGGAGCACCCCTTT +
Preference number: 5 (lower is better)
Translates to: RYWLARMSTSDGPSN*QPVPRGAQGLEHPF
Trigger: AAAGGGGTGCTCCAGGCCCTGGGCTCCGCGAGGGACAGGCTGGCAGTTGGAGGGACCGTCAGAAGTGCTCATCCGCGCCAGCCAGTACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478372.1
CDS GCA 90 bp CTGAGCACGCTGGAGACCTCCTGCACCACCAGCTCCAGTGCCTGCTaGCGCGGGTCCTCCTCAAAGGACAGGAAAGGTGGGCCCCCTTTC +
Preference number: 5 (lower is better)
Translates to: LSTLETSCTTSSSAC*RGSSSKDRKGGPPF
Trigger: GAAAGGGGGCCCACCTTTCCTGTCCTTTGAGGAGGACCCGCGGCAGCAGGCACTGGAGCTGGTGGTGCAGGAGGTCTCCAGCGTGCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS TCA 90 bp ATAGGAGACAGGCAAGGGGTGCCGCTGATGTTTCCCGGGCTTCCGTaGGGACGGAAAGGCCCACACGCCCAGCAGCCGGAACACGCTCCT +
Preference number: 5 (lower is better)
Translates to: IGDRQGVPLMFPGLP*GRKGPHAQQPEHAP
Trigger: AGGAGCGTGTTCCGGCTGCTGGGCGTGTGGGCCTTTCCGTCCTCACGGAAGCCCGGGAAACATCAGCGGCACCCCTTGCCTGTCTCCTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482186.5
CDS CCA 90 bp ATGGAGCTCTCTGACAGCTCATCACCGTCGGGGTCCAGCAGGACCTaGCTGCTCCATGCCGCGGCCTGTGGCTCCTTCTCCAAGTCCCAG +
Preference number: 5 (lower is better)
Translates to: MELSDSSSPSGSSRT*LLHAAACGSFSKSQ
Trigger: CTGGGACTTGGAGAAGGAGCCACAGGCCGCGGCATGGAGCAGCCAGGTCCTGCTGGACCCCGACGGTGATGAGCTGTCAGAGAGCTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
ENST00000482084.5
ENST00000482186.5
CDS-3UTR CAA 90 bp CACACTGGCTGCGTCCTGGTGAGGGTAGTTAACATGGGTGCACGTCTTCTGGCTTCGTCCTCCTGGGGCTaGGGGGCAAGGGATGCCTGG +
Preference number: 5 (lower is better)
Translates to: HTGCVLVRVVNMGARLLASSSWG*GARDAW
Trigger: CCAGGCATCCCTTGCCCCCAAGCCCCAGGAGGACGA...AGCCAGAAGACGTGCACCCATGTTAACTACCCTCACCAGGACGCAGCCAGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGAGCCCGTGTGCAGGCTaGCTGCAGGGCTGTCTTCGG +
Preference number: 5 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTSPCAG*LQGCLR
Trigger: CCGAAGACAGCCCTGCAGCAAGCCTGCACACGGGCT...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS GCA 90 bp GACGGAAAGGCCCACACGCCCAGCAGCCGGAACACGCTCCTCCCGTaGATCCAGCCCACGGGGAAGTGCTCACGTTTCAGAATGTTTGAA +
Preference number: 5 (lower is better)
Translates to: DGKAHTPSSRNTLLP*IQPTGKCSRFRMFE
Trigger: TTCAAACATTCTGAAACGTGAGCACTTCCCCGTGGGCTGGATGCACGGGAGGAGCGTGTTCCGGCTGCTGGGCGTGTGGGCCTTTCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482186.5
CDS TCA 90 bp ATGCTTTTTGGCAGTGCCCGGCTCCAAGACACTCATGGAGCTCTCTaGCAGCTCATCACCGTCGGGGTCCAGCAGGACCTGGCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: MLFGSARLQDTHGAL*QLITVGVQQDLAAP
Trigger: TGGAGCAGCCAGGTCCTGCTGGACCCCGACGGTGATGAGCTGTCAGAGAGCTCCATGAGTGTCTTGGAGCCGGGCACTGCCAAAAAGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
ENST00000482084.5
ENST00000482186.5
CDS GCA 90 bp GGGTGCACGTCTTCTGGCTTGGAGGTGATGACCTCAGGCCCTACGTaGAGGGCTCCACGGGGGCACCGTTCATGGTGTTCTTGTTTCTGT +
Preference number: 5 (lower is better)
Translates to: GCTSSGLEVMTSGPT*RAPRGHRSWCSCFC
Trigger: ACAGAAACAAGAACACCATGAACGGTGCCCCCGTGGAGCCCTGCACGTAGGGCCTGAGGTCATCACCTCCAAGCCAGAAGACGTGCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
ENST00000482084.5
ENST00000482186.5
CDS TCA 90 bp AGGCGATGGCCTGGACAGAGATGTCCTTCTCGATCACCTTCACCTTaGTGGGAGTCTTCACCGGAGAATCAGAGCTCAGCGGGGACGCCC +
Preference number: 5 (lower is better)
Translates to: RRWPGQRCPSRSPSP*WESSPENQSSAGTP
Trigger: GGGCGTCCCCGCTGAGCTCTGATTCTCCGGTGAAGACTCCCATCAAGGTGAAGGTGATCGAGAAGGACATCTCTGTCCAGGCCATCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
ENST00000482186.5
CDS GCA 90 bp CAGGCAGACCCGCTGGTCAGCGTGAAGCTCTGTGGCCCAGAAGGCTaGTTCTTAAATAAGTCCAGAGGAACTGTCGCCGTCGCCAGCAGA +
Preference number: 5 (lower is better)
Translates to: QADPLVSVKLCGPEG*FLNKSRGTVAVASR
Trigger: TCTGCTGGCGACGGCGACAGTTCCTCTGGACTTATTTAAGAAGCAGCCTTCTGGGCCACAGAGCTTCACGCTGACCAGCGGGTCTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
ENST00000482186.5
CDS CCA 90 bp GAAGAGAGTGTTTTGCTGACGGGGGCGCTGCGGCAGGCGATGGCCTaGACAGAGATGTCCTTCTCGATCACCTTCACCTTGATGGGAGTC +
Preference number: 5 (lower is better)
Translates to: EESVLLTGALRQAMA*TEMSFSITFTLMGV
Trigger: GACTCCCATCAAGGTGAAGGTGATCGAGAAGGACATCTCTGTCCAGGCCATCGCCTGCCGCAGCGCCCCCGTCAGCAAAACACTCTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
ENST00000482186.5
CDS-3UTR CAA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGCGTCAGACATCGCACTaGTCTCAGCCACCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTRQTSH*SQPPGP
Trigger: AGGACCAGGTGGCTGAGACAAGTGCGATGTCTGACG...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CAA 90 bp CACACTGGCTGCGTCCTGGTGAGGGTAGTTAACATGGGTGCACGTCTTCTGGCTGAAGAAGAGAGTGTTTaGCTGACGGGGGCGCTGCGG +
Preference number: 5 (lower is better)
Translates to: HTGCVLVRVVNMGARLLAEEESV*LTGALR
Trigger: CCGCAGCGCCCCCGTCAGCAAAACACTCTCTTCTTC...AGCCAGAAGACGTGCACCCATGTTAACTACCCTCACCAGGACGCAGCCAGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS CCA 90 bp ATGACCTCAGGCCCTACGTGCAGGGCTCCACGGGGGCACCGTTCATaGTGTTCTTGTTTCTGTGCCTGGAGAGCAGCTTCTTGTTCAGGA +
Preference number: 5 (lower is better)
Translates to: MTSGPTCRAPRGHRS*CSCFCAWRAASCSG
Trigger: TCCTGAACAAGAAGCTGCTCTCCAGGCACAGAAACAAGAACACCATGAACGGTGCCCCCGTGGAGCCCTGCACGTAGGGCCTGAGGTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
ENST00000482084.5
ENST00000482186.5
CDS-3UTR CAA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGCTGGAGAGCAGCTTCTaGTTCAGGATCCTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTLESSF*FRILVR
Trigger: CCTCACCAGGATCCTGAACAAGAAGCTGCTCTCCAG...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS CCA 90 bp TTCCTCCTTTATGCTTTTTGGCAGTGCCCGGCTCCAAGACACTCATaGAGCTCTCTGACAGCTCATCACCGTCGGGGTCCAGCAGGACCT +
Preference number: 5 (lower is better)
Translates to: FLLYAFWQCPAPRHS*SSLTAHHRRGPAGP
Trigger: AGGTCCTGCTGGACCCCGACGGTGATGAGCTGTCAGAGAGCTCCATGAGTGTCTTGGAGCCGGGCACTGCCAAAAAGCATAAAGGAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
ENST00000482084.5
ENST00000482186.5
CDS-3UTR CAA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGACGTCGACGCGAGGCTaGGTCTTCACAGCAGTGACA +
Preference number: 5 (lower is better)
Translates to: IKSREITTQETPAFGGQQTSTRG*VFTAVT
Trigger: TGTCACTGCTGTGAAGACCAAGCCTCGCGTCGACGT...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CAA 90 bp TGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAACAAGGGCACCTCGTCCTCCTGGGGCTaGGGGGCAAGGGATGCCTGG +
Preference number: 5 (lower is better)
Translates to: WCARFVMFSTKTNPNKGTSSSWG*GARDAW
Trigger: CCAGGCATCCCTTGCCCCCAAGCCCCAGGAGGACGA...GGTGCCCTTGTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGGCAAGTTGGGCTTTTTaGTCCTCTCTGGGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTASWAF*SSLGEA
Trigger: GGCTTCTCCCAGAGAGGACAAAAAAGCCCAACTTGC...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGAGGCCCGCTGTGCTCTaGTTTAGCAAGTATGACAGG +
Preference number: 5 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTRPAVL*FSKYDR
Trigger: CCTGTCATACTTGCTAAACAAGAGCACAGCGGGCCT...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp CACACTGGCTGCGTCCTGGTGAGGGTAGTTAACATGGGTGCACGTCTTCTGGCTGCTACGGAAGGAAGCTaGCCCATTTCCGTCTCCATG +
Preference number: 5 (lower is better)
Translates to: HTGCVLVRVVNMGARLLAATEGS*PISVSM
Trigger: CATGGAGACGGAAATGGGCAAGCTTCCTTCCGTAGC...AGCCAGAAGACGTGCACCCATGTTAACTACCCTCACCAGGACGCAGCCAGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCAGCCCGTGTGCAGGCTaGCTGCAGGGCTGTCTTCGG +
Preference number: 5 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASSPCAG*LQGCLR
Trigger: CCGAAGACAGCCCTGCAGCAAGCCTGCACACGGGCT...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp TGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAACAAGGGCACCAGCCCGTGTGCAGGCTaGCTGCAGGGCTGTCTTCGG +
Preference number: 5 (lower is better)
Translates to: WCARFVMFSTKTNPNKGTSPCAG*LQGCLR
Trigger: CCGAAGACAGCCCTGCAGCAAGCCTGCACACGGGCT...GGTGCCCTTGTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS TCA 90 bp CCACTGATGGAGAGGCAGAACCAGCCAAATGCTTCAAGATGTCCTTaGGAACGTCAGACATCGCACTTGTCTCAGCCACCTGGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: PLMERQNQPNASRCP*ERQTSHLSQPPGPP
Trigger: GGGAGGACCAGGTGGCTGAGACAAGTGCGATGTCTGACGTTCTCAAGGACATCTTGAAGCATTTGGCTGGTTCTGCCTCTCCATCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
ENST00000490479.1
CDS TCA 90 bp CATTCAACACCAACAATTCTGTGTCTGAAGAAGAGAGTGTTTTGCTaGCGGGGGCGCTGCGGCAGGCGATGGCCTGGACAGAGATGTCCT +
Preference number: 5 (lower is better)
Translates to: HSTPTILCLKKRVFC*RGRCGRRWPGQRCP
Trigger: AGGACATCTCTGTCCAGGCCATCGCCTGCCGCAGCGCCCCCGTCAGCAAAACACTCTCTTCTTCAGACACAGAATTGTTGGTGTTGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
ENST00000482186.5
CDS GCA 90 bp GCCGTCGCCAGCAGACCTTCTGAGGATCGCCCAGCCTCTGAAATCTaGAGGTGTAACTCCTTCGACTTGGCATTCAACTCGAAGGTGAAT +
Preference number: 5 (lower is better)
Translates to: AVASRPSEDRPASEI*RCNSFDLAFNSKVN
Trigger: ATTCACCTTCGAGTTGAATGCCAAGTCGAAGGAGTTACACCTGCAGATTTCAGAGGCTGGGCGATCCTCAGAAGGTCTGCTGGCGACGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
CDS CCA 90 bp TGCAGAATGATTTCAGGATTTGGCGCTCCTGAACAGACACGGCCGTaGACACACAGGCCCATAACCCGGCCAGACTCACAAGGTGAATTC +
Preference number: 5 (lower is better)
Translates to: CRMISGFGAPEQTRP*THRPITRPDSQGEF
Trigger: GAATTCACCTTGTGAGTCTGGCCGGGTTATGGGCCTGTGTGTCCACGGCCGTGTCTGTTCAGGAGCGCCAAATCCTGAAATCATTCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490479.1
CDS-3UTR CAA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCACCTCCTTTATGCTTTTaGGCAGTGCCCGGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPPPLCF*AVPGSK
Trigger: CTTGGAGCCGGGCACTGCCAAAAAGCATAAAGGAGG...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCGCCTGGGTCTTTCTGTaGATGCCGCCGGCGGAAGAA +
Preference number: 5 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASAWVFL*MPPAEE
Trigger: TTCTTCCGCCGGCGGCATCAACAGAAAGACCCAGGC...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGAGGCCCGCTGTGCTCTaGTTTAGCAAGTATGACAGG +
Preference number: 5 (lower is better)
Translates to: IKSREITTQETPAFGGQQRPAVL*FSKYDR
Trigger: CCTGTCATACTTGCTAAACAAGAGCACAGCGGGCCT...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS TCA 90 bp CACATGAGGTCCGGAGTGTTTTTCGTCAGGGTGCTGGAGAACCTCTaGACAGGATCGTTCAGCTGCACGACGCACACTGCATTAATGTGG +
Preference number: 5 (lower is better)
Translates to: HMRSGVFFVRVLENL*TGSFSCTTHTALMW
Trigger: CCACATTAATGCAGTGTGCGTCGTGCAGCTGAACGATCCTGTTCAGAGGTTCTCCAGCACCCTGACGAAAAACACTCCGGACCTCATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
ENST00000490479.1
CDS GCA 90 bp GATCAGAAGTTGACTTCTCTCCAGGTAAACAGCACCCCCATGCTGTaGAGGTCCCCGACCTGCGTTAGGCTTCTCTCTCAGGACTCTTAT +
Preference number: 5 (lower is better)
Translates to: DQKLTSLQVNSTPML*RSPTCVRLLSQDSY
Trigger: ATAAGAGTCCTGAGAGAGAAGCCTAACGCAGGTCGGGGACCTGCACAGCATGGGGGTGCTGTTTACCTGGAGAGAAGTCAACTTCTGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482186.5
CDS-3UTR CAA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGTCGTCCTCCTGGGGCTaGGGGGCAAGGGATGCCTGG +
Preference number: 5 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMSSSWG*GARDAW
Trigger: CCAGGCATCCCTTGCCCCCAAGCCCCAGGAGGACGA...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp TGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAACAAGGGCACCGCCTGGGTCTTTCTGTaGATGCCGCCGGCGGAAGAA +
Preference number: 5 (lower is better)
Translates to: WCARFVMFSTKTNPNKGTAWVFL*MPPAEE
Trigger: TTCTTCCGCCGGCGGCATCAACAGAAAGACCCAGGC...GGTGCCCTTGTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAAGGCCCGCTGTGCTCTaGTTTAGCAAGTATGACAGG +
Preference number: 5 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPRPAVL*FSKYDR
Trigger: CCTGTCATACTTGCTAAACAAGAGCACAGCGGGCCT...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGGGCTACTGGCAGCACTaGGCAAAATCCATGTATGTG +
Preference number: 5 (lower is better)
Translates to: IKSREITTQETPAFGGQQGYWQH*AKSMYV
Trigger: CACATACATGGATTTTGCCAAGTGCTGCCAGTAGCC...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGGGATCAGGGCTGGTTTaGAACTCAGACTTGAAACTT +
Preference number: 5 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTGSGLV*NSDLKL
Trigger: AAGTTTCAAGTCTGAGTTCAAAACCAGCCCTGATCC...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp GGCAGCAGGGTTTACGCCAGCCCCGAGGTCTGTTTTCCGTCAGACAGAGATACGCCACCATCCACCAATTaGTACTCTGAAGTTTCCAGA +
Preference number: 5 (lower is better)
Translates to: GSRVYASPEVCFPSDRDTPPSTN*YSEVSR
Trigger: TCTGGAAACTTCAGAGTACAAATTGGTGGATGGTGG...CGTATCTCTGTCTGACGGAAAACAGACCTCGGGGCTGGCGTAAACCCTGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCACAAGTTAACCTGAGTTaGCTCTGCAGGATTCCGCGG +
Preference number: 5 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPQVNLS*LCRIPR
Trigger: CCGCGGAATCCTGCAGAGCAAACTCAGGTTAACTTG...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS CCA 90 bp AGGCTTTGGAAACGTGTCACGTGGAAAGTGAAAGTTCCCCGTGACTaGGTGGTGACGAGAGCAGAGGTTCTGTACCAAAGGGGAGTCTTA +
Preference number: 5 (lower is better)
Translates to: RLWKRVTWKVKVPRD*VVTRAEVLYQRGVL
Trigger: TAAGACTCCCCTTTGGTACAGAACCTCTGCTCTCGTCACCACCCAGTCACGGGGAACTTTCACTTTCCACGTGACACGTTTCCAAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467074.6
CDS-3UTR CAA 90 bp GGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCTCGATCACCTTCACCTaGATGGGAGTCTTCACCGGA +
Preference number: 5 (lower is better)
Translates to: GATLKLADVLPLPLLHKLSITFT*MGVFTG
Trigger: TCCGGTGAAGACTCCCATCAAGGTGAAGGTGATCGA...GAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CAA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCCTGGAGAGCAGCTTCTaGTTCAGGATCCTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASLESSF*FRILVR
Trigger: CCTCACCAGGATCCTGAACAAGAAGCTGCTCTCCAG...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATCCGTTCATGGTGTTCTaGTTTCTGTGCCTGGAGAGC +
Preference number: 5 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNPFMVF*FLCLES
Trigger: GCTCTCCAGGCACAGAAACAAGAACACCATGAACGG...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp GAGGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCACTTCAGAAAAGGCCATaGGATGGAGACAACGTGTGC +
Preference number: 5 (lower is better)
Translates to: EVCFPSDRDTCPAFHHPPLQKRP*DGDNVC
Trigger: GCACACGTTGTCTCCATCCAATGGCCTTTTCTGAAG...TGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACCCTGTGCAGGCTGCTTaGGTCTTCGTGTCTAGGCCG +
Preference number: 5 (lower is better)
Translates to: SPQATKACRRGEAIKVIYPVQAA*VFVSRP
Trigger: CGGCCTAGACACGAAGACCAAAGCAGCCTGCACAGG...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS TCA 90 bp GTTCGAAATTTCATGGATTCCATCAGGCTGGGCTGGAACGAAATTTaGGTGAGGCCAGAAGGAGTGGGGACCCAGGAATGGGATCAGAAG +
Preference number: 5 (lower is better)
Translates to: VRNFMDSIRLGWNEI*VRPEGVGTQEWDQK
Trigger: CTTCTGATCCCATTCCTGGGTCCCCACTCCTTCTGGCCTCACTCAAATTTCGTTCCAGCCCAGCCTGATGGAATCCATGAAATTTCGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482186.5
CDS-3UTR CAA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACTCCTCCCCCAGTGCTTaGGGCTGGATATTAACGGCC +
Preference number: 5 (lower is better)
Translates to: SPQATKACRRGEAIKVIYSSPSA*GWILTA
Trigger: GGCCGTTAATATCCAGCCCAAAGCACTGGGGGAGGA...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CAA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCTCGATCACCTTCACCTaGATGGGAGTCTTCACCGGA +
Preference number: 5 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASSITFT*MGVFTG
Trigger: TCCGGTGAAGACTCCCATCAAGGTGAAGGTGATCGA...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CAA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTGATTCCGCGGGGGCCTaGCCCTGTGCAGGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: RQLMRKATGMILGIFKWCDSAGA*PCAGCF
Trigger: AAAGCAGCCTGCACAGGGCAAGGCCCCCGCGGAATC...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATTGCTTCAAGATGTCCTaGAGAACGTCAGACATCGCA +
Preference number: 5 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNCFKMS*RTSDIA
Trigger: TGCGATGTCTGACGTTCTCAAGGACATCTTGAAGCA...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CAA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACCCTCCTTTATGCTTTTaGGCAGTGCCCGGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: SPQATKACRRGEAIKVIYPPLCF*AVPGSK
Trigger: CTTGGAGCCGGGCACTGCCAAAAAGCATAAAGGAGG...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAACCGTTCATGGTGTTCTaGTTTCTGTGCCTGGAGAGC +
Preference number: 5 (lower is better)
Translates to: STKNRGTSLNKANGEGLQPFMVF*FLCLES
Trigger: GCTCTCCAGGCACAGAAACAAGAACACCATGAACGG...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACGCTACGGAAGGAAGCTaGCCCATTTCCGTCTCCATG +
Preference number: 5 (lower is better)
Translates to: SPQATKACRRGEAIKVIYATEGS*PISVSM
Trigger: CATGGAGACGGAAATGGGCAAGCTTCCTTCCGTAGC...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp TGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAACAAGGGCACCGCAGCGTCGTGGTCCTaGGAGATCCCTGATATGATA +
Preference number: 5 (lower is better)
Translates to: WCARFVMFSTKTNPNKGTAASWS*EIPDMI
Trigger: TATCATATCAGGGATCTCCAAGGACCACGACGCTGC...GGTGCCCTTGTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449165.5
CDS TCA 90 bp GTTCTGAGCTTCCTTTACAGTCGTGGGCTTGGTAATCAGAACCACTaGTGGAGAGGCAGAACCAGCCAAATGCTTCAAGATGTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: VLSFLYSRGLGNQNH*WRGRTSQMLQDVLE
Trigger: CTCAAGGACATCTTGAAGCATTTGGCTGGTTCTGCCTCTCCATCAGTGGTTCTGATTACCAAGCCCACGACTGTAAAGGAAGCTCAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
ENST00000490479.1
CDS GCA 90 bp GGCTTGGTAATCAGAACCACTGATGGAGAGGCAGAACCAGCCAAATaGTTCAAGATGTCCTTGAGAACGTCAGACATCGCACTTGTCTCA +
Preference number: 5 (lower is better)
Translates to: GLVIRTTDGEAEPAK*FKMSLRTSDIALVS
Trigger: TGAGACAAGTGCGATGTCTGACGTTCTCAAGGACATCTTGAAGCATTTGGCTGGTTCTGCCTCTCCATCAGTGGTTCTGATTACCAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
ENST00000490479.1
CDS-3UTR CAA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCTGTAACTCCTTCGACTaGGCATTCAACTCGAAGGTG +
Preference number: 5 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASCNSFD*AFNSKV
Trigger: CACCTTCGAGTTGAATGCCAAGTCGAAGGAGTTACA...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CAA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTGCCTGGGTCTTTCTGTaGATGCCGCCGGCGGAAGAA +
Preference number: 5 (lower is better)
Translates to: RQLMRKATGMILGIFKWCAWVFL*MPPAEE
Trigger: TTCTTCCGCCGGCGGCATCAACAGAAAGACCCAGGC...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATAATGATGACTGCTCTTaGACCAGCATGTCTACTGGA +
Preference number: 5 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNNDDCS*TSMSTG
Trigger: TCCAGTAGACATGCTGGTCAAAGAGCAGTCATCATT...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAACTTCAGAAAAGGCCATaGGATGGAGACAACGTGTGC +
Preference number: 5 (lower is better)
Translates to: STKNRGTSLNKANGEGLQLQKRP*DGDNVC
Trigger: GCACACGTTGTCTCCATCCAATGGCCTTTTCTGAAG...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp TGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAACAAGGGCACCGTGTTGCCTTTGCCTTaGCTTCATAAACTCCCTCCC +
Preference number: 5 (lower is better)
Translates to: WCARFVMFSTKTNPNKGTVLPLP*LHKLPP
Trigger: GGGAGGGAGTTTATGAAGCAAAGGCAAAGGCAACAC...GGTGCCCTTGTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp TGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCAAACAAGGGCACCAAGCTAGCCGACGTGTaGCCTTTGCCTTTGCTTCAT +
Preference number: 5 (lower is better)
Translates to: WCARFVMFSTKTNPNKGTKLADV*PLPLLH
Trigger: ATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTT...GGTGCCCTTGTTTGGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp GGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCCTGCTCAAAGCAACTTaGCAACTCTCGTCTATAGAG +
Preference number: 5 (lower is better)
Translates to: GATLKLADVLPLPLLHKLLLKAT*QLSSIE
Trigger: CTCTATAGACGAGAGTTGCAAAGTTGCTTTGAGCAG...GAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp GGTCTGTTTTCCGTCAGACAGAGATACGTGTCCTGCCTTCCACCATCCACCAATCTGCTCAAAGCAACTTaGCAACTCTCGTCTATAGAG +
Preference number: 5 (lower is better)
Translates to: GLFSVRQRYVSCLPPSTNLLKAT*QLSSIE
Trigger: CTCTATAGACGAGAGTTGCAAAGTTGCTTTGAGCAG...ATTGGTGGATGGTGGAAGGCAGGACACGTATCTCTGTCTGACGGAAAACAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACGATTCCGCGGGGGCCTaGCCCTGTGCAGGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHDSAGA*PCAGCF
Trigger: AAAGCAGCCTGCACAGGGCAAGGCCCCCGCGGAATC...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp ATCAAGAGCCGTGAGATTACTACCCAGGAAACACCTGCCTTCGGTGGCCAGCAGTCTTTCAAAGATTGTTaGTGTTCCAGCCACATCTTC +
Preference number: 5 (lower is better)
Translates to: IKSREITTQETPAFGGQQSFKDC*CSSHIF
Trigger: GAAGATGTGGCTGGAACACAAACAATCTTTGAAAGA...CTGCTGGCCACCGAAGGCAGGTGTTTCCTGGGTAGTAATCTCACGGCTCTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTACGTCGACGCGAGGCTaGGTCTTCACAGCAGTGACA +
Preference number: 5 (lower is better)
Translates to: RQLMRKATGMILGIFKWCTSTRG*VFTAVT
Trigger: TGTCACTGCTGTGAAGACCAAGCCTCGCGTCGACGT...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CAA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCCTGGAGAGCAGCTTCTaGTTCAGGATCCTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPLESSF*FRILVR
Trigger: CCTCACCAGGATCCTGAACAAGAAGCTGCTCTCCAG...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp GGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCGAATGTCCTGCGAGTTaGGCCCATTTGTTATTAAAC +
Preference number: 5 (lower is better)
Translates to: GATLKLADVLPLPLLHKLECPAS*AHLLLN
Trigger: GTTTAATAACAAATGGGCCAAACTCGCAGGACATTC...GAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp CACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAAGCAATGATGACTGCTCTTaGACCAGCATGTCTACTGGA +
Preference number: 5 (lower is better)
Translates to: HKEQRHLLKQSKRGRVASNDDCS*TSMSTG
Trigger: TCCAGTAGACATGCTGGTCAAAGAGCAGTCATCATT...GCTTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAGATTCCGCGGGGGCCTaGCCCTGTGCAGGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGDSAGA*PCAGCF
Trigger: AAAGCAGCCTGCACAGGGCAAGGCCCCCGCGGAATC...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS CCA 90 bp ATATTAACGGCCATTTCCGGCACACTGATGAAAGACCAGCTAATCTaGAGGTCCTCTCTCTTCTCCTTCATGTGGAACTCCAGCTGTAAA +
Preference number: 5 (lower is better)
Translates to: ILTAISGTLMKDQLI*RSSLFSFMWNSSCK
Trigger: TTTACAGCTGGAGTTCCACATGAAGGAGAAGAGAGAGGACCTCCAGATTAGCTGGTCTTTCATCAGTGTGCCGGAAATGGCCGTTAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000490479.1
CDS-3UTR CAA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGGCAAGTTGGGCTTTTTaGTCCTCTCTGGGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMASWAF*SSLGEA
Trigger: GGCTTCTCCCAGAGAGGACAAAAAAGCCCAACTTGC...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAATGCCCTAAAAAGACTTaGTTTTGGCTACTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: STKNRGTSLNKANGEGLQCPKKT*FWLLAA
Trigger: TGCTGCCAGTAGCCAAAACAAAGTCTTTTTAGGGCA...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGCAAGTTAACCTGAGTTaGCTCTGCAGGATTCCGCGG +
Preference number: 5 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMQVNLS*LCRIPR
Trigger: CCGCGGAATCCTGCAGAGCAAACTCAGGTTAACTTG...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCCAAGTTAACCTGAGTTaGCTCTGCAGGATTCCGCGG +
Preference number: 5 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPQVNLS*LCRIPR
Trigger: CCGCGGAATCCTGCAGAGCAAACTCAGGTTAACTTG...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACGAACGAGGCAGTGTATaGTGTTTCGAATGCAAACGG +
Preference number: 5 (lower is better)
Translates to: SPQATKACRRGEAIKVIYERGSV*CFECKR
Trigger: CCGTTTGCATTCGAAACACAATACACTGCCTCGTTC...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp GGTGCTACCCTGAAGCTAGCCGACGTGTTGCCTTTGCCTTTGCTTCATAAACTCTCTTTCAAAGATTGTTaGTGTTCCAGCCACATCTTC +
Preference number: 5 (lower is better)
Translates to: GATLKLADVLPLPLLHKLSFKDC*CSSHIF
Trigger: GAAGATGTGGCTGGAACACAAACAATCTTTGAAAGA...GAGTTTATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTTCAGGGTAGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAACAGTTACTCCAGATTTaGCTACTGTTCACCAACAAG +
Preference number: 5 (lower is better)
Translates to: STKNRGTSLNKANGEGLQQLLQI*LLFTNK
Trigger: CTTGTTGGTGAACAGTAGCAAAATCTGGAGTAACTG...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329623.11
CDS-3UTR CAA 90 bp TCCACAAAGAACAGAGGCACCTCCTTAAACAAAGCAAACGGGGAAGGGTTGCAACTGGAAACTATTCCTTaGTTTAGACTTGGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: STKNRGTSLNKANGEGLQLETIP*FRLGAK
Trigger: TTTGGCCCCAAGTCTAAACAAAGGAATAGTTTCCAG...TTGCAACCCTTCCCCGTTTGCTTTGTTTAAGGAGGTGCCTCTGTTCTTTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329623.11
CDS-3UTR CAA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACTCCTCCCCCAGTGCTTaGGGCTGGATATTAACGGCC +
Preference number: 5 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHSSPSA*GWILTA
Trigger: GGCCGTTAATATCCAGCCCAAAGCACTGGGGGAGGA...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CAA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACTTTACAGTCGTGGGCTaGGTAATCAGAACCACTGAT +
Preference number: 5 (lower is better)
Translates to: SPQATKACRRGEAIKVIYFTVVG*VIRTTD
Trigger: ATCAGTGGTTCTGATTACCAAGCCCACGACTGTAAA...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CAA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAGAAGAAGAGAGTGTTTaGCTGACGGGGGCGCTGCGG +
Preference number: 5 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGEEESV*LTGALR
Trigger: CCGCAGCGCCCCCGTCAGCAAAACACTCTCTTCTTC...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CAA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTATTCTTCCGTGGCGACTaGAGTTTCAGCTTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLFFRGD*SFSFED
Trigger: ATCTTCAAAGCTGAAACTCAAGTCGCCACGGAAGAA...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CAA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACTGCACGTCTTCTGGCTaGGAGGTGATGACCTCAGGC +
Preference number: 5 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHCTSSG*EVMTSG
Trigger: GCCTGAGGTCATCACCTCCAAGCCAGAAGACGTGCA...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGACCTGTGCAGGCTGCTTaGGTCTTCGTGTCTAGGCCG +
Preference number: 5 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGPVQAA*VFVSRP
Trigger: CGGCCTAGACACGAAGACCAAAGCAGCCTGCACAGG...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTGGCTACTGGCAGCACTaGGCAAAATCCATGTATGTG +
Preference number: 5 (lower is better)
Translates to: RQLMRKATGMILGIFKWCGYWQH*AKSMYV
Trigger: CACATACATGGATTTTGCCAAGTGCTGCCAGTAGCC...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp GAGAACGAGGCAGTGTATTGTGTTTCGAATGCAAACGGTCATGGACCCAAGTTAGAATGTCCTGCGAGTTaGGCCCATTTGTTATTAAAC +
Preference number: 5 (lower is better)
Translates to: ENEAVYCVSNANGHGPKLECPAS*AHLLLN
Trigger: GTTTAATAACAAATGGGCCAAACTCGCAGGACATTC...TAACTTGGGTCCATGACCGTTTGCATTCGAAACACAATACACTGCCTCGTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTCTTCAGAAAAGGCCATaGGATGGAGACAACGTGTGC +
Preference number: 5 (lower is better)
Translates to: RQLMRKATGMILGIFKWCLQKRP*DGDNVC
Trigger: GCACACGTTGTCTCCATCCAATGGCCTTTTCTGAAG...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS TCA 90 bp GGGAGAAATAACAACTTTCTCACTTTAGGAGGTAACCAAATGGCTTaGTTTTATTGCTGGATAGGCTGGGCAAGGGCTTCCCAATTTTGG +
Preference number: 5 (lower is better)
Translates to: GRNNNFLTLGGNQMA*FYCWIGWARASQFW
Trigger: CCAAAATTGGGAAGCCCTTGCCCAGCCTATCCAGCAATAAAATCAAGCCATTTGGTTACCTCCTAAAGTGAGAAAGTTGTTATTTCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482186.5
CDS-3UTR CAA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGTTTACAGTCGTGGGCTaGGTAATCAGAACCACTGAT +
Preference number: 5 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMFTVVG*VIRTTD
Trigger: ATCAGTGGTTCTGATTACCAAGCCCACGACTGTAAA...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CAA 90 bp AGCCCTCAAGCCACAAAAGCTTGTAGAAGAGGTGAGGCGATAAAGGTGATTTACAAACTTCTGATATCCTaGCACTTGAATAGAGTGCAC +
Preference number: 5 (lower is better)
Translates to: SPQATKACRRGEAIKVIYKLLIS*HLNRVH
Trigger: GTGCACTCTATTCAAGTGCAAGGATATCAGAAGTTT...GTAAATCACCTTTATCGCCTCACCTCTTCTACAAGCTTTTGTGGCTTGAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCGTGTTGCCTTTGCCTTaGCTTCATAAACTCCCTCCC +
Preference number: 5 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSVLPLP*LHKLPP
Trigger: GGGAGGGAGTTTATGAAGCAAAGGCAAAGGCAACAC...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGGGATCAGGGCTGGTTTaGAACTCAGACTTGAAACTT +
Preference number: 5 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMGSGLV*NSDLKL
Trigger: AAGTTTCAAGTCTGAGTTCAAAACCAGCCCTGATCC...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp ATTAAACTGTCAAGAACACTTCACCCCAATGATGACTGCTCTTTGACCAGCATGCCACCATCCACCAATTaGTACTCTGAAGTTTCCAGA +
Preference number: 5 (lower is better)
Translates to: IKLSRTLHPNDDCSLTSMPPSTN*YSEVSR
Trigger: TCTGGAAACTTCAGAGTACAAATTGGTGGATGGTGG...CATGCTGGTCAAAGAGCAGTCATCATTGGGGTGAAGTGTTCTTGACAGTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTGAACGAGGCAGTGTATaGTGTTTCGAATGCAAACGG +
Preference number: 5 (lower is better)
Translates to: RQLMRKATGMILGIFKWCERGSV*CFECKR
Trigger: CCGTTTGCATTCGAAACACAATACACTGCCTCGTTC...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCTGCTTCAAGATGTCCTaGAGAACGTCAGACATCGCA +
Preference number: 5 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSCFKMS*RTSDIA
Trigger: TGCGATGTCTGACGTTCTCAAGGACATCTTGAAGCA...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CAA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAGCAAGTTGGGCTTTTTaGTCCTCTCTGGGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGASWAF*SSLGEA
Trigger: GGCTTCTCCCAGAGAGGACAAAAAAGCCCAACTTGC...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAAGCTAGCCGACGTGTaGCCTTTGCCTTTGCTTCAT +
Preference number: 5 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHKLADV*PLPLLH
Trigger: ATGAAGCAAAGGCAAAGGCAACACGTCGGCTAGCTT...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTGGATCAGGGCTGGTTTaGAACTCAGACTTGAAACTT +
Preference number: 5 (lower is better)
Translates to: RQLMRKATGMILGIFKWCGSGLV*NSDLKL
Trigger: AAGTTTCAAGTCTGAGTTCAAAACCAGCCCTGATCC...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp AGGCAACTGATGAGGAAAGCGACTGGAATGATATTAGGGATATTCAAATGGTGTGAATGTCCTGCGAGTTaGGCCCATTTGTTATTAAAC +
Preference number: 5 (lower is better)
Translates to: RQLMRKATGMILGIFKWCECPAS*AHLLLN
Trigger: GTTTAATAACAAATGGGCCAAACTCGCAGGACATTC...ACACCATTTGAATATCCCTAATATCATTCCAGTCGCTTTCCTCATCAGTTGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAGTGTTGCCTTTGCCTTaGCTTCATAAACTCCCTCCC +
Preference number: 5 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGVLPLP*LHKLPP
Trigger: GGGAGGGAGTTTATGAAGCAAAGGCAAAGGCAACAC...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCCTGCTCAAAGCAACTTaGCAACTCTCGTCTATAGAG +
Preference number: 5 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSLLKAT*QLSSIE
Trigger: CTCTATAGACGAGAGTTGCAAAGTTGCTTTGAGCAG...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCTCTTTCAAAGATTGTTaGTGTTCCAGCCACATCTTC +
Preference number: 5 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPSFKDC*CSSHIF
Trigger: GAAGATGTGGCTGGAACACAAACAATCTTTGAAAGA...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACTTCTTCCGTGGCGACTaGAGTTTCAGCTTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHFFRGD*SFSFED
Trigger: ATCTTCAAAGCTGAAACTCAAGTCGCCACGGAAGAA...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329623.11
ENST00000380486.4
CDS-3UTR CAA 90 bp AGGGATATTCAAATGGTGTGCCAGGTTTGTGATGTTTTCCACCAAAACAAACCCTTTGGGGACAGAAACTaGGTAGTATTCACATGTTTT +
Preference number: 5 (lower is better)
Translates to: RDIQMVCQVCDVFHQNKPFGDRN*VVFTCF
Trigger: AAAACATGTGAATACTACCAAGTTTCTGTCCCCAAA...GGGTTTGTTTTGGTGGAAAACATCACAAACCTGGCACACCATTTGAATATCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACCCACCATCCACCAATTaGTACTCTGAAGTTTCCAGA +
Preference number: 5 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHPPSTN*YSEVSR
Trigger: TCTGGAAACTTCAGAGTACAAATTGGTGGATGGTGG...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAGAACGAGGCAGTGTATaGTGTTTCGAATGCAAACGG +
Preference number: 5 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGERGSV*CFECKR
Trigger: CCGTTTGCATTCGAAACACAATACACTGCCTCGTTC...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS CCA 90 bp AATAGGATAAACTGTGTAAACACAACACCACACATGACTCCTTTGTaGGGTGAGGAACATAATTTGACATTTGTAAATGGAACTCTCTGG +
Preference number: 5 (lower is better)
Translates to: NRINCVNTTPHMTPL*GEEHNLTFVNGTLW
Trigger: CCAGAGAGTTCCATTTACAAATGTCAAATTATGTTCCTCACCCCACAAAGGAGTCATGTGTGGTGTTGTGTTTACACAGTTTATCCTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467074.6
CDS-3UTR CAA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGATGCCCTAAAAAGACTTaGTTTTGGCTACTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGCPKKT*FWLLAA
Trigger: TGCTGCCAGTAGCCAAAACAAAGTCTTTTTAGGGCA...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp AACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACAGCAAACTTCTGATATCCTaGCACTTGAATAGAGTGCAC +
Preference number: 5 (lower is better)
Translates to: NSDLKLDENKVLCQNSHSKLLIS*HLNRVH
Trigger: GTGCACTCTATTCAAGTGCAAGGATATCAGAAGTTT...GCTGTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGAAATCCATGTATGTGTTaGGTTACTGTGTTCTACGAG +
Preference number: 5 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGNPCMC*VTVFYE
Trigger: CTCGTAGAACACAGTAACCAAACACATACATGGATT...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp TTGAACTCAGACTTGAAACTTGACGAAAATAAAGTGCTCTGTCAAAACTCTCACTTTGGGGACAGAAACTaGGTAGTATTCACATGTTTT +
Preference number: 5 (lower is better)
Translates to: LNSDLKLDENKVLCQNSHFGDRN*VVFTCF
Trigger: AAAACATGTGAATACTACCAAGTTTCTGTCCCCAAA...GTGAGAGTTTTGACAGAGCACTTTATTTTCGTCAAGTTTCAAGTCTGAGTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS-3UTR CAA 90 bp ACATTTATTTCTTTCAAAGATTGTTTGTGTTCCAGCCACATCTTCTCCAAAGGATTTGGGGACAGAAACTaGGTAGTATTCACATGTTTT +
Preference number: 5 (lower is better)
Translates to: TFISFKDCLCSSHIFSKGFGDRN*VVFTCF
Trigger: AAAACATGTGAATACTACCAAGTTTCTGTCCCCAAA...TCCTTTGGAGAAGATGTGGCTGGAACACAAACAATCTTTGAAAGAAATAAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
CDS GCA 72 bp GCTCCCGACTCGGCGTCTGGGAAGTTCCTGGGCCGCTaGGGGCCGCGCTTCCTCCTGCGCGCGCCGCCCCGG +
Preference number: 6 (lower is better)
Translates to: APDSASGKFLGR*GPRFLLRAPPR
Trigger: CCGGGGCGGCGCGCGCAGGAGGAAGCGCGGCCCGCAGCGGCCCAGGAACTTCCCAGACGCCGAGTCGGGAGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS CCA 72 bp CGGCCCGCGCTCCCGACTCGGCGTCTGGGAAGTTCCTaGGCCGCTGCGGGCCGCGCTTCCTCCTGCGCGCGC +
Preference number: 6 (lower is better)
Translates to: RPALPTRRLGSS*AAAGRASSCAR
Trigger: GCGCGCGCAGGAGGAAGCGCGGCCCGCAGCGGCCCAGGAACTTCCCAGACGCCGAGTCGGGAGCGCGGGCCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS CCA 72 bp AGCCCCGGGCCGGAACGGCGGACTCAGGACACGCGCTaGCTGCGGCCACAGCGCGCTGGGGGCGTGGAGGGG +
Preference number: 6 (lower is better)
Translates to: SPGPERRTQDTR*LRPQRAGGVEG
Trigger: CCCCTCCACGCCCCCAGCGCGCTGTGGCCGCAGCCAGCGCGTGTCCTGAGTCCGCCGTTCCGGCCCGGGGCT
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS GCA 72 bp AGGGCCGCGACGAAGAGCGACACCAGCGCGAGCCACTaGGCCTCCCCGAGCCACGAGCCCAGCCGGGCCATG +
Preference number: 6 (lower is better)
Translates to: RAATKSDTSASH*ASPSHEPSRAM
Trigger: CATGGCCCGGCTGGGCTCGTGGCTCGGGGAGGCGCAGTGGCTCGCGCTGGTGTCGCTCTTCGTCGCGGCCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS GCA 72 bp CGGTCACCCAGGCCGCCTGCCACTGGCTCCTCCAGCTaGCCAGCGTCAGGATCCAGGAGAGCAGCGCGTCGG +
Preference number: 6 (lower is better)
Translates to: RSPRPPATGSSS*PASGSRRAARR
Trigger: CCGACGCGCTGCTCTCCTGGATCCTGACGCTGGGCAGCTGGAGGAGCCAGTGGCAGGCGGCCTGGGTGACCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380486.4
ENST00000478372.1
CDS CCA 72 bp TGGCCAGCGCCCACTGCGCCAGGTACAGGCCTACCGTaGCCAGGGCCGCGACGAAGAGCGACACCAGCGCGA +
Preference number: 6 (lower is better)
Translates to: WPAPTAPGTGLP*PGPRRRATPAR
Trigger: TCGCGCTGGTGTCGCTCTTCGTCGCGGCCCTGGCCACGGTAGGCCTGTACCTGGCGCAGTGGGCGCTGGCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS GCA 72 bp TTCTCCTCCGCCGACCTGAGCACGCTGGAGACCTCCTaGACCACCAGCTCCAGTGCCTGCTGCCGCGGGTCC +
Preference number: 6 (lower is better)
Translates to: FSSADLSTLETS*TTSSSACCRGS
Trigger: GGACCCGCGGCAGCAGGCACTGGAGCTGGTGGTGCAGGAGGTCTCCAGCGTGCTCAGGTCGGCGGAGGAGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380486.4
CDS GCA 72 bp CTGGCGCGGATGAGCACTTCTGACGGTCCCTCCAACTaGCAGCCTGTCCCTCGCGGAGCCCAGGGCCTGGAG +
Preference number: 6 (lower is better)
Translates to: LARMSTSDGPSN*QPVPRGAQGLE
Trigger: CTCCAGGCCCTGGGCTCCGCGAGGGACAGGCTGGCAGTTGGAGGGACCGTCAGAAGTGCTCATCCGCGCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478372.1
CDS CCA 72 bp TCCTCGTTCAGGGCGGTCACCCAGGCCGCCTGCCACTaGCTCCTCCAGCTGCCCAGCGTCAGGATCCAGGAG +
Preference number: 6 (lower is better)
Translates to: SSFRAVTQAACH*LLQLPSVRIQE
Trigger: CTCCTGGATCCTGACGCTGGGCAGCTGGAGGAGCCAGTGGCAGGCGGCCTGGGTGACCGCCCTGAACGAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380486.4
ENST00000478372.1
CDS GCA 72 bp CCCTCTCCGGATGGGATGGGGCGTCCTCCTGGTGGGTaGTGTCCACAGAGGCCGTGTAGCCCTGCATCAGGG +
Preference number: 6 (lower is better)
Translates to: PSPDGMGRPPGG*CPQRPCSPASG
Trigger: CCCTGATGCAGGGCTACACGGCCTCTGTGGACAGCACCCACCAGGAGGACGCCCCATCCCATCCGGAGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
ENST00000482084.5
ENST00000482186.5
CDS CAA 90 bp GGCTCCTTCTCCAAGTCCCAGGAGTCTAGCTCGTCCTCCTGGGGCTaGGGGGCAAGGGATGCCTGGGCTGACTCGGCTTCCTCTGGCGGG +
Preference number: 6 (lower is better)
Translates to: GSFSKSQESSSSSWG*GARDAWADSASSGG
Trigger: CCCGCCAGAGGAAGCCGAGTCAGCCCAGGCATCCCTTGCCCCCAAGCCCCAGGAGGACGAGCTAGACTCCTGGGACTTGGAGAAGGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
ENST00000482084.5
ENST00000482186.5
CDS TCA 72 bp AGGCAAGGGGTGCCGCTGATGTTTCCCGGGCTTCCGTaGGGACGGAAAGGCCCACACGCCCAGCAGCCGGAA +
Preference number: 6 (lower is better)
Translates to: RQGVPLMFPGLP*GRKGPHAQQPE
Trigger: TTCCGGCTGCTGGGCGTGTGGGCCTTTCCGTCCTCACGGAAGCCCGGGAAACATCAGCGGCACCCCTTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482186.5
CDS GCA 72 bp GCCCACACGCCCAGCAGCCGGAACACGCTCCTCCCGTaGATCCAGCCCACGGGGAAGTGCTCACGTTTCAGA +
Preference number: 6 (lower is better)
Translates to: AHTPSSRNTLLP*IQPTGKCSRFR
Trigger: TCTGAAACGTGAGCACTTCCCCGTGGGCTGGATGCACGGGAGGAGCGTGTTCCGGCTGCTGGGCGTGTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482186.5
CDS CCA 72 bp TCTGACAGCTCATCACCGTCGGGGTCCAGCAGGACCTaGCTGCTCCATGCCGCGGCCTGTGGCTCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: SDSSSPSGSSRT*LLHAAACGSFS
Trigger: GGAGAAGGAGCCACAGGCCGCGGCATGGAGCAGCCAGGTCCTGCTGGACCCCGACGGTGATGAGCTGTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
ENST00000482084.5
ENST00000482186.5
CDS TCA 72 bp GGGACTCCAGGCAAGGCAGGTACTGGCTGGCGCGGATaGGCACTTCTGACGGTCCCTCCAACTGCCAGCCTG +
Preference number: 6 (lower is better)
Translates to: GTPGKAGTGWRG*ALLTVPPTASL
Trigger: CAGGCTGGCAGTTGGAGGGACCGTCAGAAGTGCTCATCCGCGCCAGCCAGTACCTGCCTTGCCTGGAGTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478372.1
CDS TCA 72 bp GGCAGTGCCCGGCTCCAAGACACTCATGGAGCTCTCTaGCAGCTCATCACCGTCGGGGTCCAGCAGGACCTG +
Preference number: 6 (lower is better)
Translates to: GSARLQDTHGAL*QLITVGVQQDL
Trigger: CAGGTCCTGCTGGACCCCGACGGTGATGAGCTGTCAGAGAGCTCCATGAGTGTCTTGGAGCCGGGCACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
ENST00000482084.5
ENST00000482186.5
CDS CCA 72 bp TCCTTCTCCAAGTCCCAGGAGTCTAGCTCGTCCTCCTaGGGCTTGGGGGCAAGGGATGCCTGGGCTGACTCG +
Preference number: 6 (lower is better)
Translates to: SFSKSQESSSSS*GLGARDAWADS
Trigger: CGAGTCAGCCCAGGCATCCCTTGCCCCCAAGCCCCAGGAGGACGAGCTAGACTCCTGGGACTTGGAGAAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
ENST00000482084.5
ENST00000482186.5
CDS CAA 72 bp CTCAGCGGGGACGCCCTCCCCACGTCGACGCGAGGCTaGGTCTTCACAGCAGTGACAGTAGTGACCACAGTC +
Preference number: 6 (lower is better)
Translates to: LSGDALPTSTRG*VFTAVTVVTTV
Trigger: GACTGTGGTCACTACTGTCACTGCTGTGAAGACCAAGCCTCGCGTCGACGTGGGGAGGGCGTCCCCGCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
ENST00000482186.5
CDS CAA 90 bp GAATCAGAGCTCAGCGGGGACGCCCTCCCCACGTCGACGCGAGGCTaGGTCTTCACAGCAGTGACAGTAGTGACCACAGTCCCACAGGGC +
Preference number: 6 (lower is better)
Translates to: ESELSGDALPTSTRG*VFTAVTVVTTVPQG
Trigger: GCCCTGTGGGACTGTGGTCACTACTGTCACTGCTGTGAAGACCAAGCCTCGCGTCGACGTGGGGAGGGCGTCCCCGCTGAGCTCTGATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
ENST00000482186.5
CDS CCA 72 bp GTTTTGCTGACGGGGGCGCTGCGGCAGGCGATGGCCTaGACAGAGATGTCCTTCTCGATCACCTTCACCTTG +
Preference number: 6 (lower is better)
Translates to: VLLTGALRQAMA*TEMSFSITFTL
Trigger: CAAGGTGAAGGTGATCGAGAAGGACATCTCTGTCCAGGCCATCGCCTGCCGCAGCGCCCCCGTCAGCAAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
ENST00000482186.5
CDS CCA 72 bp GGCCCTACGTGCAGGGCTCCACGGGGGCACCGTTCATaGTGTTCTTGTTTCTGTGCCTGGAGAGCAGCTTCT +
Preference number: 6 (lower is better)
Translates to: GPTCRAPRGHRS*CSCFCAWRAAS
Trigger: AGAAGCTGCTCTCCAGGCACAGAAACAAGAACACCATGAACGGTGCCCCCGTGGAGCCCTGCACGTAGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
ENST00000482084.5
ENST00000482186.5
CDS CAA 90 bp CAGGCGATGGCCTGGACAGAGATGTCCTTCTCGATCACCTTCACCTaGATGGGAGTCTTCACCGGAGAATCAGAGCTCAGCGGGGACGCC +
Preference number: 6 (lower is better)
Translates to: QAMAWTEMSFSITFT*MGVFTGESELSGDA
Trigger: GGCGTCCCCGCTGAGCTCTGATTCTCCGGTGAAGACTCCCATCAAGGTGAAGGTGATCGAGAAGGACATCTCTGTCCAGGCCATCGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
ENST00000482186.5
CDS CAA 90 bp AGGCCCTACGTGCAGGGCTCCACGGGGGCACCGTTCATGGTGTTCTaGTTTCTGTGCCTGGAGAGCAGCTTCTTGTTCAGGATCCTGGTG +
Preference number: 6 (lower is better)
Translates to: RPYVQGSTGAPFMVF*FLCLESSFLFRILV
Trigger: CACCAGGATCCTGAACAAGAAGCTGCTCTCCAGGCACAGAAACAAGAACACCATGAACGGTGCCCCCGTGGAGCCCTGCACGTAGGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
ENST00000482084.5
ENST00000482186.5
CDS TCA 72 bp CCAACAATTCTGTGTCTGAAGAAGAGAGTGTTTTGCTaGCGGGGGCGCTGCGGCAGGCGATGGCCTGGACAG +
Preference number: 6 (lower is better)
Translates to: PTILCLKKRVFC*RGRCGRRWPGQ
Trigger: CTGTCCAGGCCATCGCCTGCCGCAGCGCCCCCGTCAGCAAAACACTCTCTTCTTCAGACACAGAATTGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
ENST00000482186.5
CDS CAA 72 bp GTGCAGGGCTCCACGGGGGCACCGTTCATGGTGTTCTaGTTTCTGTGCCTGGAGAGCAGCTTCTTGTTCAGG +
Preference number: 6 (lower is better)
Translates to: VQGSTGAPFMVF*FLCLESSFLFR
Trigger: CCTGAACAAGAAGCTGCTCTCCAGGCACAGAAACAAGAACACCATGAACGGTGCCCCCGTGGAGCCCTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
ENST00000482084.5
ENST00000482186.5
CDS GCA 72 bp CCGCTGGTCAGCGTGAAGCTCTGTGGCCCAGAAGGCTaGTTCTTAAATAAGTCCAGAGGAACTGTCGCCGTC +
Preference number: 6 (lower is better)
Translates to: PLVSVKLCGPEG*FLNKSRGTVAV
Trigger: GACGGCGACAGTTCCTCTGGACTTATTTAAGAAGCAGCCTTCTGGGCCACAGAGCTTCACGCTGACCAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
ENST00000482186.5
CDS GCA 72 bp TTGACTTCTCTCCAGGTAAACAGCACCCCCATGCTGTaGAGGTCCCCGACCTGCGTTAGGCTTCTCTCTCAG +
Preference number: 6 (lower is better)
Translates to: LTSLQVNSTPML*RSPTCVRLLSQ
Trigger: CTGAGAGAGAAGCCTAACGCAGGTCGGGGACCTGCACAGCATGGGGGTGCTGTTTACCTGGAGAGAAGTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482186.5
CDS CCA 72 bp TATGCTTTTTGGCAGTGCCCGGCTCCAAGACACTCATaGAGCTCTCTGACAGCTCATCACCGTCGGGGTCCA +
Preference number: 6 (lower is better)
Translates to: YAFWQCPAPRHS*SSLTAHHRRGP
Trigger: TGGACCCCGACGGTGATGAGCTGTCAGAGAGCTCCATGAGTGTCTTGGAGCCGGGCACTGCCAAAAAGCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
ENST00000482084.5
ENST00000482186.5
CDS CCA 72 bp ATTTCAGGATTTGGCGCTCCTGAACAGACACGGCCGTaGACACACAGGCCCATAACCCGGCCAGACTCACAA +
Preference number: 6 (lower is better)
Translates to: ISGFGAPEQTRP*THRPITRPDSQ
Trigger: TTGTGAGTCTGGCCGGGTTATGGGCCTGTGTGTCCACGGCCGTGTCTGTTCAGGAGCGCCAAATCCTGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490479.1
CDS CAA 72 bp AACACCAACAATTCTGTGTCTGAAGAAGAGAGTGTTTaGCTGACGGGGGCGCTGCGGCAGGCGATGGCCTGG +
Preference number: 6 (lower is better)
Translates to: NTNNSVSEEESV*LTGALRQAMAW
Trigger: CCAGGCCATCGCCTGCCGCAGCGCCCCCGTCAGCAAAACACTCTCTTCTTCAGACACAGAATTGTTGGTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
ENST00000482186.5
CDS CAA 90 bp GCACCGTTCATGGTGTTCTTGTTTCTGTGCCTGGAGAGCAGCTTCTaGTTCAGGATCCTGGTGAGGGTGATGCCTTTCCTCCGGGAACCC +
Preference number: 6 (lower is better)
Translates to: APFMVFLFLCLESSF*FRILVRVMPFLREP
Trigger: GGGTTCCCGGAGGAAAGGCATCACCCTCACCAGGATCCTGAACAAGAAGCTGCTCTCCAGGCACAGAAACAAGAACACCATGAACGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
ENST00000482084.5
ENST00000482186.5
CDS TCA 72 bp TCCGGAGTGTTTTTCGTCAGGGTGCTGGAGAACCTCTaGACAGGATCGTTCAGCTGCACGACGCACACTGCA +
Preference number: 6 (lower is better)
Translates to: SGVFFVRVLENL*TGSFSCTTHTA
Trigger: TGCAGTGTGCGTCGTGCAGCTGAACGATCCTGTTCAGAGGTTCTCCAGCACCCTGACGAAAAACACTCCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
ENST00000490479.1
CDS TCA 72 bp TGGATTCCATCAGGCTGGGCTGGAACGAAATTTGAGTaGGGCCAGAAGGAGTGGGGACCCAGGAATGGGATC +
Preference number: 6 (lower is better)
Translates to: WIPSGWAGTKFE*GQKEWGPRNGI
Trigger: GATCCCATTCCTGGGTCCCCACTCCTTCTGGCCTCACTCAAATTTCGTTCCAGCCCAGCCTGATGGAATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482186.5
CDS TCA 72 bp ACGGTGCTGCAGAATGATTTCAGGATTTGGCGCTCCTaGACAGACACGGCCGTGGACACACAGGCCCATAAC +
Preference number: 6 (lower is better)
Translates to: TVLQNDFRIWRS*TDTAVDTQAHN
Trigger: GTTATGGGCCTGTGTGTCCACGGCCGTGTCTGTTCAGGAGCGCCAAATCCTGAAATCATTCTGCAGCACCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490479.1
CDS CCA 72 bp GTCTCAGCCACCTGGTCCTCCCCCAGTGCTTTGGGCTaGATATTAACGGCCATTTCCGGCACACTGATGAAA +
Preference number: 6 (lower is better)
Translates to: VSATWSSPSALG*ILTAISGTLMK
Trigger: TTTCATCAGTGTGCCGGAAATGGCCGTTAATATCCAGCCCAAAGCACTGGGGGAGGACCAGGTGGCTGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
ENST00000490479.1
CDS CAA 72 bp CCAGAAGGAGTGGGGACCCAGGAATGGGATCAGAAGTaGACTTCTCTCCAGGTAAACAGCACCCCCATGCTG +
Preference number: 6 (lower is better)
Translates to: PEGVGTQEWDQK*TSLQVNSTPML
Trigger: CAGCATGGGGGTGCTGTTTACCTGGAGAGAAGTCAACTTCTGATCCCATTCCTGGGTCCCCACTCCTTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482186.5
CDS CAA 90 bp GAACCATTCAACACCAACAATTCTGTGTCTGAAGAAGAGAGTGTTTaGCTGACGGGGGCGCTGCGGCAGGCGATGGCCTGGACAGAGATG +
Preference number: 6 (lower is better)
Translates to: EPFNTNNSVSEEESV*LTGALRQAMAWTEM
Trigger: CATCTCTGTCCAGGCCATCGCCTGCCGCAGCGCCCCCGTCAGCAAAACACTCTCTTCTTCAGACACAGAATTGTTGGTGTTGAATGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
ENST00000482186.5
CDS TCA 72 bp CCTGGACAGAGATGTCCTTCTCGATCACCTTCACCTTaGTGGGAGTCTTCACCGGAGAATCAGAGCTCAGCG +
Preference number: 6 (lower is better)
Translates to: PGQRCPSRSPSP*WESSPENQSSA
Trigger: CGCTGAGCTCTGATTCTCCGGTGAAGACTCCCATCAAGGTGAAGGTGATCGAGAAGGACATCTCTGTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
ENST00000482186.5
CDS TCA 72 bp ACCCTCTGGCTGCTCCAGGAACACAAGGTCATTGTGTaGCTGACTCATGCCTGGGTCTTTCTGTTGATGCCG +
Preference number: 6 (lower is better)
Translates to: TLWLLQEHKVIV*LTHAWVFLLMP
Trigger: CGGCATCAACAGAAAGACCCAGGCATGAGTCAGTCACACAATGACCTTGTGTTCCTGGAGCAGCCAGAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
ENST00000482084.5
ENST00000482186.5
CDS TCA 72 bp TTCATGGATTCCATCAGGCTGGGCTGGAACGAAATTTaGGTGAGGCCAGAAGGAGTGGGGACCCAGGAATGG +
Preference number: 6 (lower is better)
Translates to: FMDSIRLGWNEI*VRPEGVGTQEW
Trigger: CCATTCCTGGGTCCCCACTCCTTCTGGCCTCACTCAAATTTCGTTCCAGCCCAGCCTGATGGAATCCATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482186.5
CDS CAA 72 bp GCCTGGACAGAGATGTCCTTCTCGATCACCTTCACCTaGATGGGAGTCTTCACCGGAGAATCAGAGCTCAGC +
Preference number: 6 (lower is better)
Translates to: AWTEMSFSITFT*MGVFTGESELS
Trigger: GCTGAGCTCTGATTCTCCGGTGAAGACTCCCATCAAGGTGAAGGTGATCGAGAAGGACATCTCTGTCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
ENST00000482186.5
CDS CAA 90 bp ACCACTGATGGAGAGGCAGAACCAGCCAAATGCTTCAAGATGTCCTaGAGAACGTCAGACATCGCACTTGTCTCAGCCACCTGGTCCTCC +
Preference number: 6 (lower is better)
Translates to: TTDGEAEPAKCFKMS*RTSDIALVSATWSS
Trigger: GGAGGACCAGGTGGCTGAGACAAGTGCGATGTCTGACGTTCTCAAGGACATCTTGAAGCATTTGGCTGGTTCTGCCTCTCCATCAGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
ENST00000490479.1
CDS TCA 72 bp TTGGAAACGTGTCACGTGGAAAGTGAAAGTTCCCCGTaGCTGGGTGGTGACGAGAGCAGAGGTTCTGTACCA +
Preference number: 6 (lower is better)
Translates to: LETCHVESESSP*LGGDESRGSVP
Trigger: TGGTACAGAACCTCTGCTCTCGTCACCACCCAGTCACGGGGAACTTTCACTTTCCACGTGACACGTTTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467074.6
CDS GCA 72 bp AGCAGACCTTCTGAGGATCGCCCAGCCTCTGAAATCTaGAGGTGTAACTCCTTCGACTTGGCATTCAACTCG +
Preference number: 6 (lower is better)
Translates to: SRPSEDRPASEI*RCNSFDLAFNS
Trigger: CGAGTTGAATGCCAAGTCGAAGGAGTTACACCTGCAGATTTCAGAGGCTGGGCGATCCTCAGAAGGTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
CDS GCA 72 bp AACACGCTCCTCCCGTGCATCCAGCCCACGGGGAAGTaGTCACGTTTCAGAATGTTTGAAAAATGTCGATGC +
Preference number: 6 (lower is better)
Translates to: NTLLPCIQPTGK*SRFRMFEKCRC
Trigger: GCATCGACATTTTTCAAACATTCTGAAACGTGAGCACTTCCCCGTGGGCTGGATGCACGGGAGGAGCGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482186.5
CDS CCA 72 bp AAACGTGTCACGTGGAAAGTGAAAGTTCCCCGTGACTaGGTGGTGACGAGAGCAGAGGTTCTGTACCAAAGG +
Preference number: 6 (lower is better)
Translates to: KRVTWKVKVPRD*VVTRAEVLYQR
Trigger: CCTTTGGTACAGAACCTCTGCTCTCGTCACCACCCAGTCACGGGGAACTTTCACTTTCCACGTGACACGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467074.6
CDS TCA 72 bp GAGAGGCAGAACCAGCCAAATGCTTCAAGATGTCCTTaGGAACGTCAGACATCGCACTTGTCTCAGCCACCT +
Preference number: 6 (lower is better)
Translates to: ERQNQPNASRCP*ERQTSHLSQPP
Trigger: AGGTGGCTGAGACAAGTGCGATGTCTGACGTTCTCAAGGACATCTTGAAGCATTTGGCTGGTTCTGCCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
ENST00000490479.1
CDS CAA 90 bp TCATGCCTGGGTCTTTCTGTTGATGCCGCCGGCGGAAGAACAGCTTaGCACCTTTCCTTAGAATTCCTCCTTTATGCTTTTTGGCAGTGC +
Preference number: 6 (lower is better)
Translates to: SCLGLSVDAAGGRTA*HLSLEFLLYAFWQC
Trigger: GCACTGCCAAAAAGCATAAAGGAGGAATTCTAAGGAAAGGTGCAAAGCTGTTCTTCCGCCGGCGGCATCAACAGAAAGACCCAGGCATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
ENST00000482084.5
ENST00000482186.5
CDS GCA 72 bp GAAGCACATTGGGGTCACAGCTATTCATGTATCATGTaGAAGCTCAGTAAGTGTCCGATCGGGCACGGGAAT +
Preference number: 6 (lower is better)
Translates to: EAHWGHSYSCIM*KLSKCPIGHGN
Trigger: ATTCCCGTGCCCGATCGGACACTTACTGAGCTTGCACATGATACATGAATAGCTGTGACCCCAATGTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478372.1
CDS CAA 72 bp CCAGCCTCTGAAATCTGCAGGTGTAACTCCTTCGACTaGGCATTCAACTCGAAGGTGAATTCCTCTTCCCAC +
Preference number: 6 (lower is better)
Translates to: PASEICRCNSFD*AFNSKVNSSSH
Trigger: GTGGGAAGAGGAATTCACCTTCGAGTTGAATGCCAAGTCGAAGGAGTTACACCTGCAGATTTCAGAGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
CDS GCA 72 bp ATCAGAACCACTGATGGAGAGGCAGAACCAGCCAAATaGTTCAAGATGTCCTTGAGAACGTCAGACATCGCA +
Preference number: 6 (lower is better)
Translates to: IRTTDGEAEPAK*FKMSLRTSDIA
Trigger: TGCGATGTCTGACGTTCTCAAGGACATCTTGAAGCATTTGGCTGGTTCTGCCTCTCCATCAGTGGTTCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
ENST00000490479.1
CDS GCA 72 bp CTTTCCTTAGAATTCCTCCTTTATGCTTTTTGGCAGTaGCCGGCTCCAAGACACTCATGGAGCTCTCTGACA +
Preference number: 6 (lower is better)
Translates to: LSLEFLLYAFWQ*PAPRHSWSSLT
Trigger: TGTCAGAGAGCTCCATGAGTGTCTTGGAGCCGGGCACTGCCAAAAAGCATAAAGGAGGAATTCTAAGGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000449165.5
ENST00000482084.5
ENST00000482186.5
CDS CCA 72 bp CAGCAATGTAAATTCAGGGAGCTGACAACTGTACCGTaGACACAGCAGAGAGTATCTCCATTCCTGGGAAAA +
Preference number: 6 (lower is better)
Translates to: QQCKFRELTTVP*TQQRVSPFLGK
Trigger: TTTTCCCAGGAATGGAGATACTCTCTGCTGTGTCCACGGTACAGTTGTCAGCTCCCTGAATTTACATTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482186.5
CDS CAA 90 bp TTGGAGATCCCTGATATGATAATAGTGCTTTTCTTCCGTGGCGACTaGAGTTTCAGCTTTGAAGATTCACTGAGCTGTCGAATGGCCACT +
Preference number: 6 (lower is better)
Translates to: LEIPDMIIVLFFRGD*SFSFEDSLSCRMAT
Trigger: AGTGGCCATTCGACAGCTCAGTGAATCTTCAAAGCTGAAACTCAAGTCGCCACGGAAGAAAAGCACTATTATCATATCAGGGATCTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
ENST00000482186.5
CDS TCA 72 bp AACAACTTTCTCACTTTAGGAGGTAACCAAATGGCTTaGTTTTATTGCTGGATAGGCTGGGCAAGGGCTTCC +
Preference number: 6 (lower is better)
Translates to: NNFLTLGGNQMA*FYCWIGWARAS
Trigger: GGAAGCCCTTGCCCAGCCTATCCAGCAATAAAATCAAGCCATTTGGTTACCTCCTAAAGTGAGAAAGTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482186.5
CDS CAA 90 bp CTCTCAACGTGTAAAGCGTCCCTGATTAGAAAGTCTCCCATGTCCTaGGTGAATAGGATAAACTGTGTAAACACAACACCACACATGACT +
Preference number: 6 (lower is better)
Translates to: LSTCKASLIRKSPMS*VNRINCVNTTPHMT
Trigger: AGTCATGTGTGGTGTTGTGTTTACACAGTTTATCCTATTCACCAAGGACATGGGAGACTTTCTAATCAGGGACGCTTTACACGTTGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467074.6
CDS CAA 72 bp CCTGATATGATAATAGTGCTTTTCTTCCGTGGCGACTaGAGTTTCAGCTTTGAAGATTCACTGAGCTGTCGA +
Preference number: 6 (lower is better)
Translates to: PDMIIVLFFRGD*SFSFEDSLSCR
Trigger: TCGACAGCTCAGTGAATCTTCAAAGCTGAAACTCAAGTCGCCACGGAAGAAAAGCACTATTATCATATCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329623.11
ENST00000380486.4
ENST00000467074.6
ENST00000482084.5
ENST00000482186.5
CDS CAA 72 bp TGTAAAGCGTCCCTGATTAGAAAGTCTCCCATGTCCTaGGTGAATAGGATAAACTGTGTAAACACAACACCA +
Preference number: 6 (lower is better)
Translates to: CKASLIRKSPMS*VNRINCVNTTP
Trigger: TGGTGTTGTGTTTACACAGTTTATCCTATTCACCAAGGACATGGGAGACTTTCTAATCAGGGACGCTTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467074.6
CDS CAA 90 bp GTGAATAGGATAAACTGTGTAAACACAACACCACACATGACTCCTTaGTGGGGTGAGGAACATAATTTGACATTTGTAAATGGAACTCTC +
Preference number: 6 (lower is better)
Translates to: VNRINCVNTTPHMTP*WGEEHNLTFVNGTL
Trigger: GAGAGTTCCATTTACAAATGTCAAATTATGTTCCTCACCCCACAAAGGAGTCATGTGTGGTGTTGTGTTTACACAGTTTATCCTATTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467074.6
CDS CCA 72 bp AACTGTGTAAACACAACACCACACATGACTCCTTTGTaGGGTGAGGAACATAATTTGACATTTGTAAATGGA +
Preference number: 6 (lower is better)
Translates to: NCVNTTPHMTPL*GEEHNLTFVNG
Trigger: TCCATTTACAAATGTCAAATTATGTTCCTCACCCCACAAAGGAGTCATGTGTGGTGTTGTGTTTACACAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467074.6
CDS TCA 72 bp TCTTACATCATGTTCCTCTCTTTCGATAATTTTTCTTaGAATGATTTGCCAACCTCTCAACGTGTAAAGCGT +
Preference number: 6 (lower is better)
Translates to: SYIMFLSFDNFS*NDLPTSQRVKR
Trigger: ACGCTTTACACGTTGAGAGGTTGGCAAATCATTTCAAGAAAAATTATCGAAAGAGAGGAACATGATGTAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467074.6
CDS CAA 72 bp ATAAACTGTGTAAACACAACACCACACATGACTCCTTaGTGGGGTGAGGAACATAATTTGACATTTGTAAAT +
Preference number: 6 (lower is better)
Translates to: INCVNTTPHMTP*WGEEHNLTFVN
Trigger: ATTTACAAATGTCAAATTATGTTCCTCACCCCACAAAGGAGTCATGTGTGGTGTTGTGTTTACACAGTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467074.6