Pregenerated sensors for C22ORF42 (Homo sapiens)
Ensembl gene IDs: ENSG00000205856Ensembl transcript IDs: ENST00000382097.4, ENST00000467813.1, ENST00000490640.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGAGCCTCAGAATGAAATGTAAGAACACCAGGCTGCAAGAGGACTaGCTGCAGCCACAAACTGCAGGTCACTGTTCACAGGTGCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: VSLRMKCKNTRLQED*LQPQTAGHCSQVLS Trigger: ACTGAGCACCTGTGAACAGTGACCTGCAGTTTGTGGCTGCAGCCAGTCCTCTTGCAGCCTGGTGTTCTTACATTTCATTCTGAGGCTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| 3UTR-3UTR GCA 90 bp | GCTGGACCCAGCTCTTCAGATGCAGCAGATGGATTGACCCACTCTGTAATGACCGTCACTGTTCACAGGTaGTCAGTAGGAAGAGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: AGPSSSDAADGLTHSVMTVTVHR*SVGRER Trigger: TCTCTCTCTTCCTACTGAGCACCTGTGAACAGTGAC...GGTCATTACAGAGTGGGTCAATCCATCTGCTGCATCTGAAGAGCTGGGTCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| 3UTR-3UTR GCA 90 bp | TCTCACCCTAAAATGGAGATAACATCAATATTGTCTCCATCACTCCGAAACCCCTGCAAGAGGACTGGCTaGAGCCACAAACTGCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: SHPKMEITSILSPSLRNPCKRTG*SHKLQV Trigger: GACCTGCAGTTTGTGGCTGCAGCCAGTCCTCTTGCA...GGGGTTTCGGAGTGATGGAGACAATATTGATGTTATCTCCATTTTAGGGTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| 3UTR-3UTR GCA 90 bp | TCTCACCCTAAAATGGAGATAACATCAATATTGTCTCCATCACTCCGAAACCCCGTAAGAACACCAGGCTaGAAGAGGACTGGCTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: SHPKMEITSILSPSLRNPVRTPG*KRTGCS Trigger: GCTGCAGCCAGTCCTCTTGCAGCCTGGTGTTCTTAC...GGGGTTTCGGAGTGATGGAGACAATATTGATGTTATCTCCATTTTAGGGTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| 3UTR-3UTR GCA 90 bp | TCTCACCCTAAAATGGAGATAACATCAATATTGTCTCCATCACTCCGAAACCCCGCTGCAGCCACAAACTaGAGGTCACTGTTCACAGGT | + |
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Preference number: 2 (lower is better) Translates to: SHPKMEITSILSPSLRNPAAATN*RSLFTG Trigger: ACCTGTGAACAGTGACCTGCAGTTTGTGGCTGCAGC...GGGGTTTCGGAGTGATGGAGACAATATTGATGTTATCTCCATTTTAGGGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| 3UTR-3UTR TCA 90 bp | GTGACTGAGAATGTGAGCCTCAGAATGAAATGTAAGAACACCAGGCTGCAAGAGATTCATAAAATGATTTaGGCTGGGCGTGATGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: VTENVSLRMKCKNTRLQEIHKMI*AGRDGR Trigger: CCTGCCATCACGCCCAGCTCAAATCATTTTATGAAT...CTCTTGCAGCCTGGTGTTCTTACATTTCATTCTGAGGCTCACATTCTCAGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| 3UTR-3UTR TCA 90 bp | GTGACTGAGAATGTGAGCCTCAGAATGAAATGTAAGAACACCAGGCTGCAAGAGTATGCATTCATAAAATaGTTTGAGCTGGGCGTGATG | + |
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Preference number: 2 (lower is better) Translates to: VTENVSLRMKCKNTRLQEYAFIK*FELGVM Trigger: CATCACGCCCAGCTCAAATCATTTTATGAATGCATA...CTCTTGCAGCCTGGTGTTCTTACATTTCATTCTGAGGCTCACATTCTCAGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| 3UTR-3UTR TCA 90 bp | ATCAATATTGTCTCCATCACTCCGAAACCCCCTTACAGTTTGGTAAGAATTACACTTCTGCATGGTGACTaGGAATGTGAGCCTCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: INIVSITPKPPYSLVRITLLHGD*ECEPQN Trigger: ATTCTGAGGCTCACATTCTCAGTCACCATGCAGAAG...TGTAATTCTTACCAAACTGTAAGGGGGTTTCGGAGTGATGGAGACAATATTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTCACCCTAAAATGGAGATAACATCAATATTGTCTCCATCACTCCGAAACATTCACTGTAGAAGCTaGACCCAGCTCTTCAGATGC | + |
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Preference number: 2 (lower is better) Translates to: FSHPKMEITSILSPSLRNIHCRS*TQLFRC Trigger: GCATCTGAAGAGCTGGGTCCAGCTTCTACAGTGAAT...GTTTCGGAGTGATGGAGACAATATTGATGTTATCTCCATTTTAGGGTGAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| 3UTR CCA 72 bp | AGAATGAAATGTAAGAACACCAGGCTGCAAGAGGACTaGCTGCAGCCACAAACTGCAGGTCACTGTTCACAG | + |
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Preference number: 3 (lower is better) Translates to: RMKCKNTRLQED*LQPQTAGHCSQ Trigger: CTGTGAACAGTGACCTGCAGTTTGTGGCTGCAGCCAGTCCTCTTGCAGCCTGGTGTTCTTACATTTCATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR TCA 90 bp | TGGACCCAGCTCTTCAGATGCAGCAGATGGATTGACCCACTCTGTAATGACCCATGCAGCAGTCACAGTTaGGGCCCCCGCTGGGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: WTQLFRCSRWIDPLCNDPCSSHS*GPRWGP Trigger: TGGGCCCCAGCGGGGGCCTCAACTGTGACTGCTGCA...TGGGTCATTACAGAGTGGGTCAATCCATCTGCTGCATCTGAAGAGCTGGGTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| 3UTR CAA 72 bp | GAAGCTGGACCCAGCTCTTCAGATGCAGCAGATGGATaGACCCACTCTGTAATGACCCAGGATGGGGCGGGT | + |
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Preference number: 4 (lower is better) Translates to: EAGPSSSDAADG*THSVMTQDGAG Trigger: ACCCGCCCCATCCTGGGTCATTACAGAGTGGGTCAATCCATCTGCTGCATCTGAAGAGCTGGGTCCAGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR GCA 90 bp | ACTGGCTGCAGCCACAAACTGCAGGTCACTGTTCACAGGTGCTCAGTAGGAAGAAGTGGTGGATGCTGGTaGTGTGGCTGCCACAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: TGCSHKLQVTVHRCSVGRSGGCW*CGCHSL Trigger: GAGACTGTGGCAGCCACAGCACCAGCATCCACCACT...TCTTCCTACTGAGCACCTGTGAACAGTGACCTGCAGTTTGTGGCTGCAGCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR CCA 90 bp | GCTGGACCCAGCTCTTCAGATGCAGCAGATGGATTGACCCACTCTGTAATGACCCAGGCTTTGCAGTGGTaGATGCTGGTGCTGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: AGPSSSDAADGLTHSVMTQALQW*MLVLWL Trigger: CAGCCACAGCACCAGCATCCACCACTGCAAAGCCTG...GGTCATTACAGAGTGGGTCAATCCATCTGCTGCATCTGAAGAGCTGGGTCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR GCA 90 bp | TGGACCCAGCTCTTCAGATGCAGCAGATGGATTGACCCACTCTGTAATGACCCATGCTGGTGCTGTGGCTaGCACAGTCTCAGGAATCTC | + |
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Preference number: 4 (lower is better) Translates to: WTQLFRCSRWIDPLCNDPCWCCG*HSLRNL Trigger: GAGATTCCTGAGACTGTGGCAGCCACAGCACCAGCA...TGGGTCATTACAGAGTGGGTCAATCCATCTGCTGCATCTGAAGAGCTGGGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR GCA 90 bp | TGGACCCAGCTCTTCAGATGCAGCAGATGGATTGACCCACTCTGTAATGACCCATGCAAGAGGACTGGCTaGAGCCACAAACTGCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: WTQLFRCSRWIDPLCNDPCKRTG*SHKLQV Trigger: GACCTGCAGTTTGTGGCTGCAGCCAGTCCTCTTGCA...TGGGTCATTACAGAGTGGGTCAATCCATCTGCTGCATCTGAAGAGCTGGGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR CCA 90 bp | ACTGGCTGCAGCCACAAACTGCAGGTCACTGTTCACAGGTGCTCAGTAGGAAGAAGATCTTCGACCAAATaGTGGTCGTGCTTGGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: TGCSHKLQVTVHRCSVGRRSSTK*WSCLAS Trigger: TGAGGCCAAGCACGACCACCATTTGGTCGAAGATCT...TCTTCCTACTGAGCACCTGTGAACAGTGACCTGCAGTTTGTGGCTGCAGCCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR CCA 90 bp | GTGACTGAGAATGTGAGCCTCAGAATGAAATGTAAGAACACCAGGCTGCAAGAGTGCAGTGGTGGATGCTaGTGCTGTGGCTGCCACAGT | + |
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Preference number: 4 (lower is better) Translates to: VTENVSLRMKCKNTRLQECSGGC*CCGCHS Trigger: ACTGTGGCAGCCACAGCACCAGCATCCACCACTGCA...CTCTTGCAGCCTGGTGTTCTTACATTTCATTCTGAGGCTCACATTCTCAGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR TCA 90 bp | ACTGGCTGCAGCCACAAACTGCAGGTCACTGTTCACAGGTGCTCAGTAGGAAGAATTCATAAAATGATTTaGGCTGGGCGTGATGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: TGCSHKLQVTVHRCSVGRIHKMI*AGRDGR Trigger: CCTGCCATCACGCCCAGCTCAAATCATTTTATGAAT...TCTTCCTACTGAGCACCTGTGAACAGTGACCTGCAGTTTGTGGCTGCAGCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR GCA 90 bp | CACCCTAAAATGGAGATAACATCAATATTGTCTCCATCACTCCGAAACCCCCTTCTTTGCAGTGGTGGATaGTGGTGCTGTGGCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: HPKMEITSILSPSLRNPLLCSGG*WCCGCH Trigger: GTGGCAGCCACAGCACCAGCATCCACCACTGCAAAG...AAGGGGGTTTCGGAGTGATGGAGACAATATTGATGTTATCTCCATTTTAGGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR GCA 90 bp | TGGACCCAGCTCTTCAGATGCAGCAGATGGATTGACCCACTCTGTAATGACCCAACCAAATGGTGGTCGTaGTTGGCCTCAGATATTTCA | + |
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Preference number: 4 (lower is better) Translates to: WTQLFRCSRWIDPLCNDPTKWWS*LASDIS Trigger: TGAAATATCTGAGGCCAAGCACGACCACCATTTGGT...TGGGTCATTACAGAGTGGGTCAATCCATCTGCTGCATCTGAAGAGCTGGGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR CCA 90 bp | CACCCTAAAATGGAGATAACATCAATATTGTCTCCATCACTCCGAAACCCCCTTGCAGGGTCCCACATCTaGCCTGCAGCAGTCACAGTT | + |
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Preference number: 4 (lower is better) Translates to: HPKMEITSILSPSLRNPLAGSHI*PAAVTV Trigger: AACTGTGACTGCTGCAGGCCAGATGTGGGACCCTGC...AAGGGGGTTTCGGAGTGATGGAGACAATATTGATGTTATCTCCATTTTAGGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR CCA 90 bp | CACCCTAAAATGGAGATAACATCAATATTGTCTCCATCACTCCGAAACCCCCTTTCTTCAGTGGGACGGTaGTCGTGCTTGGCCTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: HPKMEITSILSPSLRNPLSSVGR*SCLASG Trigger: ACCTGAGGCCAAGCACGACCACCGTCCCACTGAAGA...AAGGGGGTTTCGGAGTGATGGAGACAATATTGATGTTATCTCCATTTTAGGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR GCA 90 bp | GTGACTGAGAATGTGAGCCTCAGAATGAAATGTAAGAACACCAGGCTGCAAGAGACCCAGCTCTTCAGATaGAGCAGATGGATTGACCCA | + |
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Preference number: 4 (lower is better) Translates to: VTENVSLRMKCKNTRLQETQLFR*SRWIDP Trigger: TGGGTCAATCCATCTGCTGCATCTGAAGAGCTGGGT...CTCTTGCAGCCTGGTGTTCTTACATTTCATTCTGAGGCTCACATTCTCAGTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR CCA 90 bp | TGGACCCAGCTCTTCAGATGCAGCAGATGGATTGACCCACTCTGTAATGACCCACCTGCACATCTTCAGTaGGACCTATATTTTCTAGAG | + |
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Preference number: 4 (lower is better) Translates to: WTQLFRCSRWIDPLCNDPPAHLQ*DLYFLE Trigger: CTCTAGAAAATATAGGTCCCACTGAAGATGTGCAGG...TGGGTCATTACAGAGTGGGTCAATCCATCTGCTGCATCTGAAGAGCTGGGTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR CCA 90 bp | GTGACTGAGAATGTGAGCCTCAGAATGAAATGTAAGAACACCAGGCTGCAAGAGTCTTCGACCAAATGGTaGTCGTGCTTGGCCTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: VTENVSLRMKCKNTRLQESSTKW*SCLASD Trigger: ATCTGAGGCCAAGCACGACCACCATTTGGTCGAAGA...CTCTTGCAGCCTGGTGTTCTTACATTTCATTCTGAGGCTCACATTCTCAGTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR CCA 90 bp | GTGACTGAGAATGTGAGCCTCAGAATGAAATGTAAGAACACCAGGCTGCAAGAGATTCACTGTAGAAGCTaGACCCAGCTCTTCAGATGC | + |
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Preference number: 4 (lower is better) Translates to: VTENVSLRMKCKNTRLQEIHCRS*TQLFRC Trigger: GCATCTGAAGAGCTGGGTCCAGCTTCTACAGTGAAT...CTCTTGCAGCCTGGTGTTCTTACATTTCATTCTGAGGCTCACATTCTCAGTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR GCA 90 bp | GTGACTGAGAATGTGAGCCTCAGAATGAAATGTAAGAACACCAGGCTGCAAGAGTTCATATCTCTCCTTTaGCATCTCCGGTGTCATGAG | + |
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Preference number: 4 (lower is better) Translates to: VTENVSLRMKCKNTRLQEFISLL*HLRCHE Trigger: CTCATGACACCGGAGATGGCAAAGGAGAGATATGAA...CTCTTGCAGCCTGGTGTTCTTACATTTCATTCTGAGGCTCACATTCTCAGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR CCA 90 bp | GTGACTGAGAATGTGAGCCTCAGAATGAAATGTAAGAACACCAGGCTGCAAGAGCTTTCAAATCCAATTTaGCAGGCTTTGCAGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: VTENVSLRMKCKNTRLQELSNPI*QALQWW Trigger: CCACCACTGCAAAGCCTGCCAAATTGGATTTGAAAG...CTCTTGCAGCCTGGTGTTCTTACATTTCATTCTGAGGCTCACATTCTCAGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR GCA 90 bp | TTTTCTCACCCTAAAATGGAGATAACATCAATATTGTCTCCATCACTCCGAAACGTAAGAACACCAGGCTaGAAGAGGACTGGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: FSHPKMEITSILSPSLRNVRTPG*KRTGCS Trigger: GCTGCAGCCAGTCCTCTTGCAGCCTGGTGTTCTTAC...GTTTCGGAGTGATGGAGACAATATTGATGTTATCTCCATTTTAGGGTGAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR CCA 90 bp | GTGACTGAGAATGTGAGCCTCAGAATGAAATGTAAGAACACCAGGCTGCAAGAGAGGTACTGCATGAGTTaGGCCTTCTTAGCTTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: VTENVSLRMKCKNTRLQERYCMS*AFLAFK Trigger: TTTGAAAGCTAAGAAGGCCCAACTCATGCAGTACCT...CTCTTGCAGCCTGGTGTTCTTACATTTCATTCTGAGGCTCACATTCTCAGTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR GCA 90 bp | TTTTCTCACCCTAAAATGGAGATAACATCAATATTGTCTCCATCACTCCGAAACCAATTTGGCAGGCTTTaGAGTGGTGGATGCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: FSHPKMEITSILSPSLRNQFGRL*SGGCWC Trigger: GCACCAGCATCCACCACTGCAAAGCCTGCCAAATTG...GTTTCGGAGTGATGGAGACAATATTGATGTTATCTCCATTTTAGGGTGAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR GCA 90 bp | TTTTCTCACCCTAAAATGGAGATAACATCAATATTGTCTCCATCACTCCGAAACGGGAGGCTGAGGTACTaGATGAGTTGGGCCTTCTTA | + |
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Preference number: 4 (lower is better) Translates to: FSHPKMEITSILSPSLRNGRLRY*MSWAFL Trigger: TAAGAAGGCCCAACTCATGCAGTACCTCAGCCTCCC...GTTTCGGAGTGATGGAGACAATATTGATGTTATCTCCATTTTAGGGTGAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR GCA 90 bp | TTTTCTCACCCTAAAATGGAGATAACATCAATATTGTCTCCATCACTCCGAAACGCTGCAGCCACAAACTaGAGGTCACTGTTCACAGGT | + |
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Preference number: 4 (lower is better) Translates to: FSHPKMEITSILSPSLRNAAATN*RSLFTG Trigger: ACCTGTGAACAGTGACCTGCAGTTTGTGGCTGCAGC...GTTTCGGAGTGATGGAGACAATATTGATGTTATCTCCATTTTAGGGTGAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR CCA 90 bp | ATCAATATTGTCTCCATCACTCCGAAACCCCCTTACAGTTTGGTAAGAATTACAGGGCGTCCAAACCTTTaGACATCTTCAGCATCTTCG | + |
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Preference number: 4 (lower is better) Translates to: INIVSITPKPPYSLVRITGRPNL*TSSASS Trigger: CGAAGATGCTGAAGATGTCCAAAGGTTTGGACGCCC...TGTAATTCTTACCAAACTGTAAGGGGGTTTCGGAGTGATGGAGACAATATTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR GCA 90 bp | ATCAATATTGTCTCCATCACTCCGAAACCCCCTTACAGTTTGGTAAGAATTACAGTCACTGTTCACAGGTaGTCAGTAGGAAGAGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: INIVSITPKPPYSLVRITVTVHR*SVGRER Trigger: TCTCTCTCTTCCTACTGAGCACCTGTGAACAGTGAC...TGTAATTCTTACCAAACTGTAAGGGGGTTTCGGAGTGATGGAGACAATATTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR CCA 90 bp | CACCCTAAAATGGAGATAACATCAATATTGTCTCCATCACTCCGAAACCCCCTTTTCAGATGCAGCAGATaGATTGACCCACTCTGTAAT | + |
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Preference number: 4 (lower is better) Translates to: HPKMEITSILSPSLRNPLFRCSR*IDPLCN Trigger: ATTACAGAGTGGGTCAATCCATCTGCTGCATCTGAA...AAGGGGGTTTCGGAGTGATGGAGACAATATTGATGTTATCTCCATTTTAGGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR CCA 90 bp | TTTTCTCACCCTAAAATGGAGATAACATCAATATTGTCTCCATCACTCCGAAACCAGTTTGCTCCCCATTaGGCACCTAAACACACAAAA | + |
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Preference number: 4 (lower is better) Translates to: FSHPKMEITSILSPSLRNQFAPH*APKHTK Trigger: TTTTGTGTGTTTAGGTGCCCAATGGGGAGCAAACTG...GTTTCGGAGTGATGGAGACAATATTGATGTTATCTCCATTTTAGGGTGAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR CAA 90 bp | GCTGGACCCAGCTCTTCAGATGCAGCAGATGGATTGACCCACTCTGTAATGACCCTGCAGCAGTCACAGTaGAGGCCCCCGCTGGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: AGPSSSDAADGLTHSVMTLQQSQ*RPPLGP Trigger: GGGCCCCAGCGGGGGCCTCAACTGTGACTGCTGCAG...GGTCATTACAGAGTGGGTCAATCCATCTGCTGCATCTGAAGAGCTGGGTCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS GCA 90 bp | ATCCAATTTGGCAGGCTTTGCAGTGGTGGATGCTGGTGCTGTGGCTaGCACAGTCTCAGGAATCTCACACTCATGGCAGGGTCCCACATC | + |
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Preference number: 5 (lower is better) Translates to: IQFGRLCSGGCWCCG*HSLRNLTLMAGSHI Trigger: GATGTGGGACCCTGCCATGAGTGTGAGATTCCTGAGACTGTGGCAGCCACAGCACCAGCATCCACCACTGCAAAGCCTGCCAAATTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382097.4 ENST00000467813.1 |
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| CDS GCA 90 bp | TTGGACATCTTCAGCATCTTCGGCGTCTTCGGGAGGCTGAGGTACTaGATGAGTTGGGCCTTCTTAGCTTTCAAATCCAATTTGGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: LDIFSIFGVFGRLRY*MSWAFLAFKSNLAG Trigger: GCCTGCCAAATTGGATTTGAAAGCTAAGAAGGCCCAACTCATGCAGTACCTCAGCCTCCCGAAGACGCCGAAGATGCTGAAGATGTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382097.4 ENST00000467813.1 |
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| CDS-3UTR CAA 90 bp | GTGACTGAGAATGTGAGCCTCAGAATGAAATGTAAGAACACCAGGCTGCAAGAGAGGCAGCAAGTCAGTTaGCTCCCCATTGGGCACCTA | + |
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Preference number: 5 (lower is better) Translates to: VTENVSLRMKCKNTRLQERQQVS*LPIGHL Trigger: TAGGTGCCCAATGGGGAGCAAACTGACTTGCTGCCT...CTCTTGCAGCCTGGTGTTCTTACATTTCATTCTGAGGCTCACATTCTCAGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR CAA 90 bp | TGGACCCAGCTCTTCAGATGCAGCAGATGGATTGACCCACTCTGTAATGACCCAGCTTTCAAATCCAATTaGGCAGGCTTTGCAGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: WTQLFRCSRWIDPLCNDPAFKSN*AGFAVV Trigger: CACCACTGCAAAGCCTGCCAAATTGGATTTGAAAGC...TGGGTCATTACAGAGTGGGTCAATCCATCTGCTGCATCTGAAGAGCTGGGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR CAA 90 bp | TGGACCCAGCTCTTCAGATGCAGCAGATGGATTGACCCACTCTGTAATGACCCAGAGGTACTGCATGAGTaGGGCCTTCTTAGCTTTCAA | + |
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Preference number: 5 (lower is better) Translates to: WTQLFRCSRWIDPLCNDPEVLHE*GLLSFQ Trigger: TTGAAAGCTAAGAAGGCCCAACTCATGCAGTACCTC...TGGGTCATTACAGAGTGGGTCAATCCATCTGCTGCATCTGAAGAGCTGGGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR CAA 90 bp | CACCCTAAAATGGAGATAACATCAATATTGTCTCCATCACTCCGAAACCCCCTTCGGGCGTCCAAACCTTaGGACATCTTCAGCATCTTC | + |
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Preference number: 5 (lower is better) Translates to: HPKMEITSILSPSLRNPLRASKP*DIFSIF Trigger: GAAGATGCTGAAGATGTCCAAAGGTTTGGACGCCCG...AAGGGGGTTTCGGAGTGATGGAGACAATATTGATGTTATCTCCATTTTAGGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS-3UTR CAA 90 bp | ATCAATATTGTCTCCATCACTCCGAAACCCCCTTACAGTTTGGTAAGAATTACAGATGCAGCAGATGGATaGACCCACTCTGTAATGACC | + |
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Preference number: 5 (lower is better) Translates to: INIVSITPKPPYSLVRITDAADG*THSVMT Trigger: GGTCATTACAGAGTGGGTCAATCCATCTGCTGCATC...TGTAATTCTTACCAAACTGTAAGGGGGTTTCGGAGTGATGGAGACAATATTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000382097.4 |
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| CDS TCA 72 bp | GGCAGGGTCCCACATCTGGCCTGCAGCAGTCACAGTTaGGGCCCCCGCTGGGGCCCAGGCAGCAAGTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: GRVPHLACSSHS*GPRWGPGSKSV Trigger: AACTGACTTGCTGCCTGGGCCCCAGCGGGGGCCTCAACTGTGACTGCTGCAGGCCAGATGTGGGACCCTGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000382097.4 ENST00000467813.1 |
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| CDS CAA 90 bp | TCACACTCATGGCAGGGTCCCACATCTGGCCTGCAGCAGTCACAGTaGAGGCCCCCGCTGGGGCCCAGGCAGCAAGTCAGTTTGCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: SHSWQGPTSGLQQSQ*RPPLGPRQQVSLLP Trigger: GGGGAGCAAACTGACTTGCTGCCTGGGCCCCAGCGGGGGCCTCAACTGTGACTGCTGCAGGCCAGATGTGGGACCCTGCCATGAGTGTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000382097.4 ENST00000467813.1 |
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| CDS GCA 72 bp | GGCAGGCTTTGCAGTGGTGGATGCTGGTGCTGTGGCTaGCACAGTCTCAGGAATCTCACACTCATGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: GRLCSGGCWCCG*HSLRNLTLMAG Trigger: CCCTGCCATGAGTGTGAGATTCCTGAGACTGTGGCAGCCACAGCACCAGCATCCACCACTGCAAAGCCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382097.4 ENST00000467813.1 |
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| CDS CCA 72 bp | TTCGGCGTCTTCGGGAGGCTGAGGTACTGCATGAGTTaGGCCTTCTTAGCTTTCAAATCCAATTTGGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: FGVFGRLRYCMS*AFLAFKSNLAG Trigger: GCCTGCCAAATTGGATTTGAAAGCTAAGAAGGCCCAACTCATGCAGTACCTCAGCCTCCCGAAGACGCCGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382097.4 ENST00000467813.1 |
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| CDS CAA 72 bp | CTTCGGCGTCTTCGGGAGGCTGAGGTACTGCATGAGTaGGGCCTTCTTAGCTTTCAAATCCAATTTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LRRLREAEVLHE*GLLSFQIQFGR Trigger: CCTGCCAAATTGGATTTGAAAGCTAAGAAGGCCCAACTCATGCAGTACCTCAGCCTCCCGAAGACGCCGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382097.4 ENST00000467813.1 |
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| CDS CAA 90 bp | CTGAGGTACTGCATGAGTTGGGCCTTCTTAGCTTTCAAATCCAATTaGGCAGGCTTTGCAGTGGTGGATGCTGGTGCTGTGGCTGCCACA | + |
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Preference number: 6 (lower is better) Translates to: LRYCMSWAFLAFKSN*AGFAVVDAGAVAAT Trigger: TGTGGCAGCCACAGCACCAGCATCCACCACTGCAAAGCCTGCCAAATTGGATTTGAAAGCTAAGAAGGCCCAACTCATGCAGTACCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382097.4 ENST00000467813.1 |
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| CDS GCA 72 bp | AACCTGGCTGCTGATGGGTTCATTGAGCCGAGACCGTaGCATCTTAACCCAGCAGAGGTAATCTTCATATCT | + |
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Preference number: 6 (lower is better) Translates to: NLAADGFIEPRP*HLNPAEVIFIS Trigger: AGATATGAAGATTACCTCTGCTGGGTTAAGATGGCACGGTCTCGGCTCAATGAACCCATCAGCAGCCAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000382097.4 ENST00000467813.1 ENST00000490640.1 |
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| CDS GCA 72 bp | GCACTGTACTATAGAAACAGGAAGTACATTCGTGGCTaGCTAGATCCAGGGGTGTGGGAGTTGGGAAAGACA | + |
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Preference number: 6 (lower is better) Translates to: ALYYRNRKYIRG*LDPGVWELGKT Trigger: TGTCTTTCCCAACTCCCACACCCCTGGATCTAGGCAGCCACGAATGTACTTCCTGTTTCTATAGTACAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467813.1 |
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| CDS CAA 90 bp | GTGGGAGTTGGGAAAGACAGAGGAGTGACTACTAGTGGGGTTTCTTaGAGGGGGAATAAAGAGGTTCTAAGATTAGATTGTAACAATGGT | + |
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Preference number: 6 (lower is better) Translates to: VGVGKDRGVTTSGVS*RGNKEVLRLDCNNG Trigger: ACCATTGTTACAATCTAATCTTAGAACCTCTTTATTCCCCCTCAAAGAAACCCCACTAGTAGTCACTCCTCTGTCTTTCCCAACTCCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000467813.1 |
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| CDS CAA 72 bp | GGGAAAGACAGAGGAGTGACTACTAGTGGGGTTTCTTaGAGGGGGAATAAAGAGGTTCTAAGATTAGATTGT | + |
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Preference number: 6 (lower is better) Translates to: GKDRGVTTSGVS*RGNKEVLRLDC Trigger: ACAATCTAATCTTAGAACCTCTTTATTCCCCCTCAAAGAAACCCCACTAGTAGTCACTCCTCTGTCTTTCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000467813.1 |
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