RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C22ORF39 (Homo sapiens)

Ensembl gene IDs: ENSG00000242259

Ensembl transcript IDs: ENST00000399562.9, ENST00000399568.5, ENST00000509549.5

Found 414 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCAGAGTCTCCAGGGGCCGACCTGGGAGCCTAAGAAGTGAAGCCTaGTGGTGCAGAGGGGCCAGCAAGCCCTACCTGCTCGGCACACCT +
Preference number: 1 (lower is better)
Translates to: TRVSRGRPGSLRSEA*WCRGASKPYLLGTP
Trigger: AGGTGTGCCGAGCAGGTAGGGCTTGCTGGCCCCTCTGCACCAGCAGGCTTCACTTCTTAGGCTCCCAGGTCGGCCCCTGGAGACTCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR TCA 90 bp CGTAGACGAGGAGCCAATGGCGGTACTCGTGGCTGGACTGCAGGGTaGGTGCTGCTGCCACCTGGTTCTCTAGGTAGGCCAGGGTGGTCT +
Preference number: 1 (lower is better)
Translates to: RRRGANGGTRGWTAG*VLLPPGSLGRPGWS
Trigger: AGACCACCCTGGCCTACCTAGAGAACCAGGTGGCAGCAGCACTCACCCTGCAGTCCAGCCACGAGTACCGCCATTGGCTCCTCGTCTACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR GCA 90 bp TGGTGCAGAGGGGCCAGCAAGCCCTACCTGCTCGGCACACCTGCCTaGATGTGCAGTGGAACTGAGCGAGTGGAGCAGAGTGTGAGCACT +
Preference number: 1 (lower is better)
Translates to: WCRGASKPYLLGTPA*MCSGTERVEQSVST
Trigger: AGTGCTCACACTCTGCTCCACTCGCTCAGTTCCACTGCACATGCAGGCAGGTGTGCCGAGCAGGTAGGGCTTGCTGGCCCCTCTGCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR TCA 90 bp GAGTTAGGGGTACTGGAGTCCAGTGGCAGTAGCTGTGGACTGCTATaGGAAGAGAGCATGGTGCCCGCCAGGGAGCCCGAGAGGGGGATG +
Preference number: 1 (lower is better)
Translates to: ELGVLESSGSSCGLL*EESMVPAREPERGM
Trigger: CATCCCCCTCTCGGGCTCCCTGGCGGGCACCATGCTCTCTTCTCATAGCAGTCCACAGCTACTGCCACTGGACTCCAGTACCCCTAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR TCA 90 bp TGCTGGTCAGGGCAGGAGCACCTGGTGTGGCTTTGGACCGCTCTGTaGACCGGGAGTCAAACGCTTTCATGGGTTCGATCTTGGACGGGG +
Preference number: 1 (lower is better)
Translates to: CWSGQEHLVWLWTAL*TGSQTLSWVRSWTG
Trigger: CCCCGTCCAAGATCGAACCCATGAAAGCGTTTGACTCCCGGTTCACAGAGCGGTCCAAAGCCACACCAGGTGCTCCTGCCCTGACCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR GCA 90 bp AGAGGGGCCAGCAAGCCCTACCTGCTCGGCACACCTGCCTGCATGTaGAGTGGAACTGAGCGAGTGGAGCAGAGTGTGAGCACTCACAAT +
Preference number: 1 (lower is better)
Translates to: RGASKPYLLGTPACM*SGTERVEQSVSTHN
Trigger: ATTGTGAGTGCTCACACTCTGCTCCACTCGCTCAGTTCCACTGCACATGCAGGCAGGTGTGCCGAGCAGGTAGGGCTTGCTGGCCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR TCA 90 bp CATGCCCTGGCTTTTGCTGCACTCTCCAGCTCTGCCCCAGGAACCTaGAGGCAGCTGCTGCAATCCCAGGCATCACATGCAGGCTGCAAA +
Preference number: 1 (lower is better)
Translates to: HALAFAALSSSAPGT*RQLLQSQASHAGCK
Trigger: TTTGCAGCCTGCATGTGATGCCTGGGATTGCAGCAGCTGCCTTCAGGTTCCTGGGGCAGAGCTGGAGAGTGCAGCAAAAGCCAGGGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR CCA 90 bp CGCCATGACGTAGGAGCCTGTGCAATGCAAAGTAGAGATCGGGGATaGCAGGAGGATGGGAGAGAGGAGACGGCGACCACAGGTGGAGAA +
Preference number: 1 (lower is better)
Translates to: RHDVGACAMQSRDRG*QEDGREETATTGGE
Trigger: TTCTCCACCTGTGGTCGCCGTCTCCTCTCTCCCATCCTCCTGCCATCCCCGATCTCTACTTTGCATTGCACAGGCTCCTACGTCATGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR TCA 90 bp AGGGGTGGGCAAGTAGGGCTAGCAATGTCCTGCTCCATGTTCCTGTaGGCAAGAGCTCACAGGGACCCACCAGACTGTGTAGGCTGGTCA +
Preference number: 1 (lower is better)
Translates to: RGGQVGLAMSCSMFL*ARAHRDPPDCVGWS
Trigger: TGACCAGCCTACACAGTCTGGTGGGTCCCTGTGAGCTCTTGCTCACAGGAACATGGAGCAGGACATTGCTAGCCCTACTTGCCCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR TCA 90 bp CACCTGCCTGCATGTGCAGTGGAACTGAGCGAGTGGAGCAGAGTGTaGGCACTCACAATGCTCACCAAACCTGGGACGTGGCAGGCAGTT +
Preference number: 1 (lower is better)
Translates to: HLPACAVELSEWSRV*ALTMLTKPGTWQAV
Trigger: AACTGCCTGCCACGTCCCAGGTTTGGTGAGCATTGTGAGTGCTCACACTCTGCTCCACTCGCTCAGTTCCACTGCACATGCAGGCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR TCA 90 bp CAAGCCCTACCTGCTCGGCACACCTGCCTGCATGTGCAGTGGAACTaGGCGAGTGGAGCAGAGTGTGAGCACTCACAATGCTCACCAAAC +
Preference number: 1 (lower is better)
Translates to: QALPARHTCLHVQWN*ASGAECEHSQCSPN
Trigger: GTTTGGTGAGCATTGTGAGTGCTCACACTCTGCTCCACTCGCTCAGTTCCACTGCACATGCAGGCAGGTGTGCCGAGCAGGTAGGGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR TCA 90 bp GTTGGTCTTCCATCCCTCCCGTTCGATGATCTGGGCAGTGGGGCCTaGGTTGTTCATGGCATGGGCAGACACCAGGTAATGCCCATCAGG +
Preference number: 1 (lower is better)
Translates to: VGLPSLPFDDLGSGA*VVHGMGRHQVMPIR
Trigger: CCTGATGGGCATTACCTGGTGTCTGCCCATGCCATGAACAACTCAGGCCCCACTGCCCAGATCATCGAACGGGAGGGATGGAAGACCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR TCA 90 bp AGCATGGCGTCCTGGGATGGCAGGCTGCTCCTAAAGTCTGCACACTaGGCCAGTGAGTCCTGCTTGTCAGAAACCAGGTTCCTGCCAGGA +
Preference number: 1 (lower is better)
Translates to: SMASWDGRLLLKSAH*ASESCLSETRFLPG
Trigger: TCCTGGCAGGAACCTGGTTTCTGACAAGCAGGACTCACTGGCTCAGTGTGCAGACTTTAGGAGCAGCCTGCCATCCCAGGACGCCATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CCA 90 bp ATCGGAGCTGACCTGGAGGGTGAATGCTCTCTGGGGGCTTGGAATTaGCAGCTTCAGTGCAAGTGCTGGTGCAGACAGACACATGGCCTC +
Preference number: 1 (lower is better)
Translates to: IGADLEGECSLGAWN*QLQCKCWCRQTHGL
Trigger: GAGGCCATGTGTCTGTCTGCACCAGCACTTGCACTGAAGCTGCCAATTCCAAGCCCCCAGAGAGCATTCACCCTCCAGGTCAGCTCCGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR TCA 90 bp GTCCTGGGATGGCAGGCTGCTCCTAAAGTCTGCACACTGAGCCAGTaGGTCCTGCTTGTCAGAAACCAGGTTCCTGCCAGGATGGAGTGT +
Preference number: 1 (lower is better)
Translates to: VLGWQAAPKVCTLSQ*VLLVRNQVPARMEC
Trigger: ACACTCCATCCTGGCAGGAACCTGGTTTCTGACAAGCAGGACTCACTGGCTCAGTGTGCAGACTTTAGGAGCAGCCTGCCATCCCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR GCA 90 bp AGGGACCCACCAGACTGTGTAGGCTGGTCACAGTCCCCAGGGCTGTaGAACAGCAACTTGAAACAGACTGAGGAAGCTGCACAGGCCAAT +
Preference number: 1 (lower is better)
Translates to: RDPPDCVGWSQSPGL*NSNLKQTEEAAQAN
Trigger: ATTGGCCTGTGCAGCTTCCTCAGTCTGTTTCAAGTTGCTGTTGCACAGCCCTGGGGACTGTGACCAGCCTACACAGTCTGGTGGGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR CCA 90 bp CCAACAAAGTCCATGTTGGTCTTCCATCCCTCCCGTTCGATGATCTaGGCAGTGGGGCCTGAGTTGTTCATGGCATGGGCAGACACCAGG +
Preference number: 1 (lower is better)
Translates to: PTKSMLVFHPSRSMI*AVGPELFMAWADTR
Trigger: CCTGGTGTCTGCCCATGCCATGAACAACTCAGGCCCCACTGCCCAGATCATCGAACGGGAGGGATGGAAGACCAACATGGACTTTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CCA 90 bp GGAAGGATCGGAGCTGACCTGGAGGGTGAATGCTCTCTGGGGGCTTaGAATTGGCAGCTTCAGTGCAAGTGCTGGTGCAGACAGACACAT +
Preference number: 1 (lower is better)
Translates to: GRIGADLEGECSLGA*NWQLQCKCWCRQTH
Trigger: ATGTGTCTGTCTGCACCAGCACTTGCACTGAAGCTGCCAATTCCAAGCCCCCAGAGAGCATTCACCCTCCAGGTCAGCTCCGATCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR TCA 90 bp TCATGGCATGGGCAGACACCAGGTAATGCCCATCAGGTGACCAGCTaGGCCGCAACACATGGGTCGTTCCTCCACACTCATCAAAAGGCT +
Preference number: 1 (lower is better)
Translates to: SWHGQTPGNAHQVTS*AATHGSFLHTHQKA
Trigger: AGCCTTTTGATGAGTGTGGAGGAACGACCCATGTGTTGCGGCTCAGCTGGTCACCTGATGGGCATTACCTGGTGTCTGCCCATGCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR GCA 90 bp TTCAGTTTACCTGAGAAGCCTAGACCTCAGGACCGCCATCTCCTATaGTACCATGCCCAGCCTGACCTGGCTGCTCACAAGTACCTGCCA +
Preference number: 1 (lower is better)
Translates to: FSLPEKPRPQDRHLL*YHAQPDLAAHKYLP
Trigger: TGGCAGGTACTTGTGAGCAGCCAGGTCAGGCTGGGCATGGTAGCATAGGAGATGGCGGTCCTGAGGTCTAGGCTTCTCAGGTAAACTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR GCA 90 bp GTTCCTCCACACTCATCAAAAGGCTTGGTGATGCTGGTCTCCAACTaGCAGTCCAGCGTCCTCCACACCTTTAGGCTGCGGTCATCAGCT +
Preference number: 1 (lower is better)
Translates to: VPPHSSKGLVMLVSN*QSSVLHTFRLRSSA
Trigger: AGCTGATGACCGCAGCCTAAAGGTGTGGAGGACGCTGGACTGGCAGTTGGAGACCAGCATCACCAAGCCTTTTGATGAGTGTGGAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CCA 90 bp GGTTGCCTTAGACACATCAGTACTCCCCTGATGATGGGGGAACGCTaGCTCCTCTTTAGATGCTCCTGCTCTTGGGATCCCGTGAGCACA +
Preference number: 1 (lower is better)
Translates to: GCLRHISTPLMMGER*LLFRCSCSWDPVST
Trigger: TGTGCTCACGGGATCCCAAGAGCAGGAGCATCTAAAGAGGAGCCAGCGTTCCCCCATCATCAGGGGAGTACTGATGTGTCTAAGGCAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR CCA 90 bp TTGGAATTGGCAGCTTCAGTGCAAGTGCTGGTGCAGACAGACACATaGCCTCCTTCTCTGCGGTTAGGGCAGCTGGAGACTGGACAGACA +
Preference number: 1 (lower is better)
Translates to: LELAASVQVLVQTDT*PPSLRLGQLETGQT
Trigger: TGTCTGTCCAGTCTCCAGCTGCCCTAACCGCAGAGAAGGAGGCCATGTGTCTGTCTGCACCAGCACTTGCACTGAAGCTGCCAATTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR GCA 90 bp CATAATGCTTGGCCTCCTGGAAGCTCTAAAGCGGTGCAATTGTCCTaGAGAACATCGCAGTGTCAGGGTATCCTGCATGCAGGTGAGGGG +
Preference number: 1 (lower is better)
Translates to: HNAWPPGSSKAVQLS*RTSQCQGILHAGEG
Trigger: CCCCTCACCTGCATGCAGGATACCCTGACACTGCGATGTTCTGCAGGACAATTGCACCGCTTTAGAGCTTCCAGGAGGCCAAGCATTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR GCA 90 bp TCCTATGCTACCATGCCCAGCCTGACCTGGCTGCTCACAAGTACCTaGCATAATGCTTGGCCTCCTGGAAGCTCTAAAGCGGTGCAATTG +
Preference number: 1 (lower is better)
Translates to: SYATMPSLTWLLTST*HNAWPPGSSKAVQL
Trigger: CAATTGCACCGCTTTAGAGCTTCCAGGAGGCCAAGCATTATGGCAGGTACTTGTGAGCAGCCAGGTCAGGCTGGGCATGGTAGCATAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR GCA 90 bp TGCTCATTATTAAACCAGCCACAGCCATGCTGGAGGCACCCTGGTTaGCTTAGACACATCAGTACTCCCCTGATGATGGGGGAACGCTGG +
Preference number: 1 (lower is better)
Translates to: CSLLNQPQPCWRHPG*LRHISTPLMMGERW
Trigger: CCAGCGTTCCCCCATCATCAGGGGAGTACTGATGTGTCTAAGGCAACCAGGGTGCCTCCAGCATGGCTGTGGCTGGTTTAATAATGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR GCA 90 bp TGCTGGTCTCCAACTGCCAGTCCAGCGTCCTCCACACCTTTAGGCTaGGGTCATCAGCTTGAGAAGCTATGTATTTACCAACAGGGTCCC +
Preference number: 1 (lower is better)
Translates to: CWSPTASPASSTPLG*GHQLEKLCIYQQGP
Trigger: GGGACCCTGTTGGTAAATACATAGCTTCTCAAGCTGATGACCGCAGCCTAAAGGTGTGGAGGACGCTGGACTGGCAGTTGGAGACCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CCA 90 bp ATGCCCAGCCTGACCTGGCTGCTCACAAGTACCTGCCATAATGCTTaGCCTCCTGGAAGCTCTAAAGCGGTGCAATTGTCCTGCAGAACA +
Preference number: 1 (lower is better)
Translates to: MPSLTWLLTSTCHNA*PPGSSKAVQLSCRT
Trigger: TGTTCTGCAGGACAATTGCACCGCTTTAGAGCTTCCAGGAGGCCAAGCATTATGGCAGGTACTTGTGAGCAGCCAGGTCAGGCTGGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR CCA 90 bp GAGCGAGTGGAGCAGAGTGTGAGCACTCACAATGCTCACCAAACCTaGGACGTGGCAGGCAGTTTCCCAAGGACTAGGAAAGACATTCAC +
Preference number: 1 (lower is better)
Translates to: ERVEQSVSTHNAHQT*DVAGSFPRTRKDIH
Trigger: GTGAATGTCTTTCCTAGTCCTTGGGAAACTGCCTGCCACGTCCCAGGTTTGGTGAGCATTGTGAGTGCTCACACTCTGCTCCACTCGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR TCA 90 bp TGCCAGTCCAGCGTCCTCCACACCTTTAGGCTGCGGTCATCAGCTTaGGAAGCTATGTATTTACCAACAGGGTCCCATGTCAACCCTTTG +
Preference number: 1 (lower is better)
Translates to: CQSSVLHTFRLRSSA*EAMYLPTGSHVNPL
Trigger: CAAAGGGTTGACATGGGACCCTGTTGGTAAATACATAGCTTCTCAAGCTGATGACCGCAGCCTAAAGGTGTGGAGGACGCTGGACTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR GCA 90 bp CAAGTACCTGCCATAATGCTTGGCCTCCTGGAAGCTCTAAAGCGGTaGAATTGTCCTGCAGAACATCGCAGTGTCAGGGTATCCTGCATG +
Preference number: 1 (lower is better)
Translates to: QVPAIMLGLLEALKR*NCPAEHRSVRVSCM
Trigger: CATGCAGGATACCCTGACACTGCGATGTTCTGCAGGACAATTGCACCGCTTTAGAGCTTCCAGGAGGCCAAGCATTATGGCAGGTACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR CCA 90 bp TATAGATTCACAGGAGGTTGCATAGGAGGTTGTCTAGGGAGGTCCTaGGTACCCTTGCCCCAGCCTCCCCCAATGTTAACACCTTATACA +
Preference number: 1 (lower is better)
Translates to: YRFTGGCIGGCLGRS*VPLPQPPPMLTPYT
Trigger: TGTATAAGGTGTTAACATTGGGGGAGGCTGGGGCAAGGGTACCCAGGACCTCCCTAGACAACCTCCTATGCAACCTCCTGTGAATCTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
3UTR GCA 90 bp ATAGTCACACTACAGAGGCAGGACTTAATGCTTCCTAACAGAGCATaGAGCCGCACAATGCATACCTTGCTAAACAAGCAGGTGGCAGGG +
Preference number: 1 (lower is better)
Translates to: IVTLQRQDLMLPNRA*SRTMHTLLNKQVAG
Trigger: CCCTGCCACCTGCTTGTTTAGCAAGGTATGCATTGTGCGGCTGCATGCTCTGTTAGGAAGCATTAAGTCCTGCCTCTGTAGTGTGACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR GCA 90 bp CCCACTGGCTTCCAGTGGAGTAGTGAACCGGACCCAGTAAGTCCTTaGATATTTCTCGAAGTCGGTATTCAAACCCTTCGTTTACGAGGT +
Preference number: 1 (lower is better)
Translates to: PTGFQWSSEPDPVSP*IFLEVGIQTLRLRG
Trigger: ACCTCGTAAACGAAGGGTTTGAATACCGACTTCGAGAAATATGCAAGGACTTACTGGGTCCGGTTCACTACTCCACTGGAAGCCAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR TCA 90 bp CTTCTCTACTGTCTCTACCTCAAGCTCAAGTTTTCGCTTGGACAGTaGGGAAGCCTTAGCCAAAGGGACTTTCTCATCGCTGTCACTGCT +
Preference number: 1 (lower is better)
Translates to: LLYCLYLKLKFSLGQ*GSLSQRDFLIAVTA
Trigger: AGCAGTGACAGCGATGAGAAAGTCCCTTTGGCTAAGGCTTCCTCACTGTCCAAGCGAAAACTTGAGCTTGAGGTAGAGACAGTAGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR GCA 90 bp GTCCAGCTGTGCTATGCAGAGAGGCGTGATTCTTCTCCGGCCATCTaGTGTCCGAGTCTCAACTTGTTTCTTCAAAAGATTCTTCCTGAT +
Preference number: 1 (lower is better)
Translates to: VQLCYAERRDSSPAI*CPSLNLFLQKILPD
Trigger: ATCAGGAAGAATCTTTTGAAGAAACAAGTTGAGACTCGGACAGCAGATGGCCGGAGAAGAATCACGCCTCTCTGCATAGCACAGCTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR GCA 90 bp AGATTATTCTGCCCCAAAGAACAAATTAAAAGATATTCAACTTGCTaGCTGTGTCCAGGAAGAGAGCAGGGAGGGTGCTGGGCACAGACC +
Preference number: 1 (lower is better)
Translates to: RLFCPKEQIKRYSTC*LCPGREQGGCWAQT
Trigger: GGTCTGTGCCCAGCACCCTCCCTGCTCTCTTCCTGGACACAGGCAGCAAGTTGAATATCTTTTAATTTGTTCTTTGGGGCAGAATAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR GCA 90 bp TTGAAGATTTTTGGGTTGAATTTCACGACAGTCACAGCTTTCCGGTaGCCAACAAAGTCCATGTTGGTCTTCCATCCCTCCCGTTCGATG +
Preference number: 1 (lower is better)
Translates to: LKIFGLNFTTVTAFR*PTKSMLVFHPSRSM
Trigger: CATCGAACGGGAGGGATGGAAGACCAACATGGACTTTGTTGGGCACCGGAAAGCTGTGACTGTCGTGAAATTCAACCCAAAAATCTTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CCA 90 bp CACAGTTCACACATGCTAAGTGATTGTCCATCTGGCAAAGCATCTTaGGAATATTTTCATCCTTCTCGTCATCCTCCTGGAGGACTGGAG +
Preference number: 1 (lower is better)
Translates to: HSSHMLSDCPSGKAS*EYFHPSRHPPGGLE
Trigger: CTCCAGTCCTCCAGGAGGATGACGAGAAGGATGAAAATATTCCCAAGATGCTTTGCCAGATGGACAATCACTTAGCATGTGTGAACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR TCA 90 bp TATTTACCAACAGGGTCCCATGTCAACCCTTTGACCAAGCCAGAATaGCCTCTCAGAGTAGCTAGAATTTCTGGGAACTTTACAGCATTC +
Preference number: 1 (lower is better)
Translates to: YLPTGSHVNPLTKPE*PLRVARISGNFTAF
Trigger: GAATGCTGTAAAGTTCCCAGAAATTCTAGCTACTCTGAGAGGTCATTCTGGCTTGGTCAAAGGGTTGACATGGGACCCTGTTGGTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR TCA 90 bp AAGGAGTGCTTAATTCCATATGTCTTGGACTTGGATTTCTTCAGCTaGGTCCACAAACCCTCTTTATGCAAGGTTGTGTGTTCTGTAGCT +
Preference number: 1 (lower is better)
Translates to: KECLIPYVLDLDFFS*VHKPSLCKVVCSVA
Trigger: AGCTACAGAACACACAACCTTGCATAAAGAGGGTTTGTGGACTCAGCTGAAGAAATCCAAGTCCAAGACATATGGAATTAAGCACTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR CCA 90 bp GTTTCAAAACTGTGGTCTTATAAGCCTCAAACCCTGTCCAACATGTaGACACTCAGATGTTGTGAAGCAATTGACATAGAAACAAATGCA +
Preference number: 1 (lower is better)
Translates to: VSKLWSYKPQTLSNM*TLRCCEAIDIETNA
Trigger: TGCATTTGTTTCTATGTCAATTGCTTCACAACATCTGAGTGTCCACATGTTGGACAGGGTTTGAGGCTTATAAGACCACAGTTTTGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR TCA 90 bp AATTTCCTTGAGTTTCATCTGAGTTGCTGTGTGTACAGCAGTTACTaGAAATGGCACTATATCACATACAGTACGGATACATATTGTTTT +
Preference number: 1 (lower is better)
Translates to: NFLEFHLSCCVYSSY*KWHYITYSTDTYCF
Trigger: AAAACAATATGTATCCGTACTGTATGTGATATAGTGCCATTTTCAGTAACTGCTGTACACACAGCAACTCAGATGAAACTCAAGGAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
3UTR-3UTR GCA 90 bp GCACGGAGAAGAGCCGGGCAGCCTGCCTTCCCGAGTTGGAGGTGCGGCCCTGGACAGTGCAAGTGCTGGTaGAGACAGACACATGGCCTC +
Preference number: 2 (lower is better)
Translates to: ARRRAGQPAFPSWRCGPGQCKCW*RQTHGL
Trigger: GAGGCCATGTGTCTGTCTGCACCAGCACTTGCACTG...TCCAGGGCCGCACCTCCAACTCGGGAAGGCAGGCTGCCCGGCTCTTCTCCGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR TCA 90 bp ACGGAGAAGAGCCGGGCAGCCTGCCTTCCCGAGTTGGAGGTGCGGCCCTGGATTGTAATGCCCATCAGGTaGCCAGCTGAGCCGCAACAC +
Preference number: 2 (lower is better)
Translates to: TEKSRAACLPELEVRPWIVMPIR*PAEPQH
Trigger: GTGTTGCGGCTCAGCTGGTCACCTGATGGGCATTAC...AATCCAGGGCCGCACCTCCAACTCGGGAAGGCAGGCTGCCCGGCTCTTCTCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR TCA 90 bp GTGCCCGCCAGGGAGCCCGAGAGGGGGATGCTGTTAAAGAATGCCGTGGAGAAGCTGGGCAGTGGGGCCTaGGTTGTTCATGGCATGGGC +
Preference number: 2 (lower is better)
Translates to: VPAREPERGMLLKNAVEKLGSGA*VVHGMG
Trigger: GCCCATGCCATGAACAACTCAGGCCCCACTGCCCAG...CTTCTCCACGGCATTCTTTAACAGCATCCCCCTCTCGGGCTCCCTGGCGGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR CCA 90 bp GCACGGAGAAGAGCCGGGCAGCCTGCCTTCCCGAGTTGGAGGTGCGGCCCTGGACTTCAGTGCAAGTGCTaGTGCAGACAGACACATGGC +
Preference number: 2 (lower is better)
Translates to: ARRRAGQPAFPSWRCGPGLQCKC*CRQTHG
Trigger: GCCATGTGTCTGTCTGCACCAGCACTTGCACTGAAG...TCCAGGGCCGCACCTCCAACTCGGGAAGGCAGGCTGCCCGGCTCTTCTCCGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR GCA 90 bp GCAGCAGTGAGGATCCGGCTGGTGAGTACCGTCTCCCACTCCTTCCCTTCCCGGATGCTGGTCTCCAACTaGCAGTCCAGCGTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: AAVRIRLVSTVSHSFPSRMLVSN*QSSVLH
Trigger: GTGGAGGACGCTGGACTGGCAGTTGGAGACCAGCAT...CCGGGAAGGGAAGGAGTGGGAGACGGTACTCACCAGCCGGATCCTCACTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR CCA 90 bp ACGGAGAAGAGCCGGGCAGCCTGCCTTCCCGAGTTGGAGGTGCGGCCCTGGATTGGCCTGAGTTGTTCATaGCATGGGCAGACACCAGGT +
Preference number: 2 (lower is better)
Translates to: TEKSRAACLPELEVRPWIGLSCS*HGQTPG
Trigger: ACCTGGTGTCTGCCCATGCCATGAACAACTCAGGCC...AATCCAGGGCCGCACCTCCAACTCGGGAAGGCAGGCTGCCCGGCTCTTCTCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR CCA 90 bp TTACGAGGTACCGTGCGTAGACGAGGAGCCAATGGCGGTACTCGTGGCTGGACTCGCCTGCGACTGAGGTaGCTGAGCCCATCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: LRGTVRRRGANGGTRGWTRLRLR*LSPSPW
Trigger: CCAGGGAGATGGGCTCAGCCACCTCAGTCGCAGGCG...AGTCCAGCCACGAGTACCGCCATTGGCTCCTCGTCTACGCACGGTACCTCGTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR TCA 90 bp CGGCCCTGGATTATGGCTAACGGTCCTGAGCACAGCATGGCGTCCTGGGATGGCTCTCAGGGTTCTCAATaGCGGCTGTGGAGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: RPWIMANGPEHSMASWDGSQGSQ*RLWRAG
Trigger: CCCAGCTCTCCACAGCCGTCATTGAGAACCCTGAGA...GCCATCCCAGGACGCCATGCTGTGCTCAGGACCGTTAGCCATAATCCAGGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR GCA 90 bp GTCGGAGTCATGCTGGTCAGGGCAGGAGCACCTGGTGTGGCTTTGGACCGCTCTAGCTGCTGCTGCTGCTaGCTTCGCTGGTACTTGAGC +
Preference number: 2 (lower is better)
Translates to: VGVMLVRAGAPGVALDRSSCCCC*LRWYLS
Trigger: GCTCAAGTACCAGCGAAGGCAGCAGCAGCAGCAGCT...AGAGCGGTCCAAAGCCACACCAGGTGCTCCTGCCCTGACCAGCATGACTCCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR GCA 90 bp GCACGGAGAAGAGCCGGGCAGCCTGCCTTCCCGAGTTGGAGGTGCGGCCCTGGAGATGCTGTTAAAGAATaGCGTGGAGAAGTCCCCAGT +
Preference number: 2 (lower is better)
Translates to: ARRRAGQPAFPSWRCGPGDAVKE*RGEVPS
Trigger: ACTGGGGACTTCTCCACGGCATTCTTTAACAGCATC...TCCAGGGCCGCACCTCCAACTCGGGAAGGCAGGCTGCCCGGCTCTTCTCCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CAA 90 bp GCTGTCGGAGTCATGCTGGTCAGGGCAGGAGCACCTGGTGTGGCTTaGGACCGCTCTGTGAACCGGGAGTCAAACGCTTTCATGGGTTCG +
Preference number: 2 (lower is better)
Translates to: AVGVMLVRAGAPGVA*DRSVNRESNAFMGS
Trigger: CGAACCCATGAAAGCGTTTGACTCCCGGTTCACAGAGCGGTCCAAAGCCACACCAGGTGCTCCTGCCCTGACCAGCATGACTCCGACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR TCA 90 bp ACGTCACAGCTGCCCGCAGCAGTGAGGATCCGGCTGGTGAGTACCGTCTCCCACCATCAAAAGGCTTGGTaGTGCTGGTCTCCAACTGCC +
Preference number: 2 (lower is better)
Translates to: TSQLPAAVRIRLVSTVSHHQKAW*CWSPTA
Trigger: GGCAGTTGGAGACCAGCATCACCAAGCCTTTTGATG...GTGGGAGACGGTACTCACCAGCCGGATCCTCACTGCTGCGGGCAGCTGTGACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR GCA 90 bp TTACGAGGTACCGTGCGTAGACGAGGAGCCAATGGCGGTACTCGTGGCTGGACTGCGAGCGGTCCTTGCTaGCAACAGCACAGCAGCAGT +
Preference number: 2 (lower is better)
Translates to: LRGTVRRRGANGGTRGWTASGPC*QQHSSS
Trigger: ACTGCTGCTGTGCTGTTGGCAGCAAGGACCGCTCGC...AGTCCAGCCACGAGTACCGCCATTGGCTCCTCGTCTACGCACGGTACCTCGTAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR GCA 90 bp GTGAGGATCCGGCTGGTGAGTACCGTCTCCCACTCCTTCCCTTCCCGGTTGCACCCCAGTGTCCAGCTGTaGTATGCAGAGAGGCGTGAT +
Preference number: 2 (lower is better)
Translates to: VRIRLVSTVSHSFPSRLHPSVQL*YAERRD
Trigger: ATCACGCCTCTCTGCATAGCACAGCTGGACACTGGG...GTGCAACCGGGAAGGGAAGGAGTGGGAGACGGTACTCACCAGCCGGATCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR CCA 90 bp GTCGGAGTCATGCTGGTCAGGGCAGGAGCACCTGGTGTGGCTTTGGACCGCTCTGCCACTGCTCCACATTaGCAAGCTTACCACTGGAGC +
Preference number: 2 (lower is better)
Translates to: VGVMLVRAGAPGVALDRSATAPH*QAYHWS
Trigger: GCTCCAGTGGTAAGCTTGCCAATGTGGAGCAGTGGC...AGAGCGGTCCAAAGCCACACCAGGTGCTCCTGCCCTGACCAGCATGACTCCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR CCA 90 bp GGTCGCAGCACTCTTCTGGTCCAGCTGCTGCTGCTGCTGCCTTCGCTGGTACTTGCTAGCCAGGCATCGTaGGGAGACCATGCTACATCC +
Preference number: 2 (lower is better)
Translates to: GRSTLLVQLLLLLPSLVLASQAS*GDHATS
Trigger: GGATGTAGCATGGTCTCCCCACGATGCCTGGCTAGC...AAGTACCAGCGAAGGCAGCAGCAGCAGCAGCTGGACCAGAAGAGTGCTGCGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR CCA 90 bp ACCACAGGCTCTGTGCAAGGCTTCGAGGCGCCGAAGGAGTTAGGGGTACTGGAGTCCCGTTCGATGATCTaGGCAGTGGGGCCTGAGTTG +
Preference number: 2 (lower is better)
Translates to: TTGSVQGFEAPKELGVLESRSMI*AVGPEL
Trigger: CAACTCAGGCCCCACTGCCCAGATCATCGAACGGGA...CTCCAGTACCCCTAACTCCTTCGGCGCCTCGAAGCCTTGCACAGAGCCTGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR CCA 90 bp ATGGTGCCCGCCAGGGAGCCCGAGAGGGGGATGCTGTTAAAGAATGCCGTGGAGTGCTGCTGCCTTCGCTaGTACTTGAGCATCTCAGGG +
Preference number: 2 (lower is better)
Translates to: MVPAREPERGMLLKNAVECCCLR*YLSISG
Trigger: CCCTGAGATGCTCAAGTACCAGCGAAGGCAGCAGCA...CTCCACGGCATTCTTTAACAGCATCCCCCTCTCGGGCTCCCTGGCGGGCACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR CCA 90 bp CGGCCCTGGATTATGGCTAACGGTCCTGAGCACAGCATGGCGTCCTGGGATGGCCTGGGGGCTTGGAATTaGCAGCTTCAGTGCAAGTGC +
Preference number: 2 (lower is better)
Translates to: RPWIMANGPEHSMASWDGLGAWN*QLQCKC
Trigger: GCACTTGCACTGAAGCTGCCAATTCCAAGCCCCCAG...GCCATCCCAGGACGCCATGCTGTGCTCAGGACCGTTAGCCATAATCCAGGGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR CCA 90 bp GTGAGGATCCGGCTGGTGAGTACCGTCTCCCACTCCTTCCCTTCCCGGTTGCACTGCTCTCTGGGGGCTTaGAATTGGCAGCTTCAGTGC +
Preference number: 2 (lower is better)
Translates to: VRIRLVSTVSHSFPSRLHCSLGA*NWQLQC
Trigger: GCACTGAAGCTGCCAATTCCAAGCCCCCAGAGAGCA...GTGCAACCGGGAAGGGAAGGAGTGGGAGACGGTACTCACCAGCCGGATCCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR TCA 90 bp GTGCCCGCCAGGGAGCCCGAGAGGGGGATGCTGTTAAAGAATGCCGTGGAGAAGCAAACAGTTCATGGATaGCCACCAGCGGCCGTTTCA +
Preference number: 2 (lower is better)
Translates to: VPAREPERGMLLKNAVEKQTVHG*PPAAVS
Trigger: TGAAACGGCCGCTGGTGGTCATCCATGAACTGTTTG...CTTCTCCACGGCATTCTTTAACAGCATCCCCCTCTCGGGCTCCCTGGCGGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR TCA 90 bp ATGGTGCCCGCCAGGGAGCCCGAGAGGGGGATGCTGTTAAAGAATGCCGTGGAGGCCTTCGCTGGTACTTaGGCATCTCAGGGTTCTCAA +
Preference number: 2 (lower is better)
Translates to: MVPAREPERGMLLKNAVEAFAGT*ASQGSQ
Trigger: TTGAGAACCCTGAGATGCTCAAGTACCAGCGAAGGC...CTCCACGGCATTCTTTAACAGCATCCCCCTCTCGGGCTCCCTGGCGGGCACCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR TCA 90 bp ACCACAGGCTCTGTGCAAGGCTTCGAGGCGCCGAAGGAGTTAGGGGTACTGGAGAGCTGTGGACTGCTATaGGAAGAGAGCATGGTGCCC +
Preference number: 2 (lower is better)
Translates to: TTGSVQGFEAPKELGVLESCGLL*EESMVP
Trigger: GGGCACCATGCTCTCTTCTCATAGCAGTCCACAGCT...CTCCAGTACCCCTAACTCCTTCGGCGCCTCGAAGCCTTGCACAGAGCCTGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR GCA 90 bp GTGAGGATCCGGCTGGTGAGTACCGTCTCCCACTCCTTCCCTTCCCGGTTGCACGAGACACACCGCCACTaGTCCACATTGGCAAGCTTA +
Preference number: 2 (lower is better)
Translates to: VRIRLVSTVSHSFPSRLHETHRH*STLASL
Trigger: TAAGCTTGCCAATGTGGAGCAGTGGCGGTGTGTCTC...GTGCAACCGGGAAGGGAAGGAGTGGGAGACGGTACTCACCAGCCGGATCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR GCA 90 bp GTCGGAGTCATGCTGGTCAGGGCAGGAGCACCTGGTGTGGCTTTGGACCGCTCTATCGTGGGGAGACCATaGTACATCCATCACATCGCC +
Preference number: 2 (lower is better)
Translates to: VGVMLVRAGAPGVALDRSIVGRP*YIHHIA
Trigger: GGCGATGTGATGGATGTAGCATGGTCTCCCCACGAT...AGAGCGGTCCAAAGCCACACCAGGTGCTCCTGCCCTGACCAGCATGACTCCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR GCA 90 bp GTCGGAGTCATGCTGGTCAGGGCAGGAGCACCTGGTGTGGCTTTGGACCGCTCTCAGTGTTATCCACGCTaGATGAGGCTAGCCAGGCAT +
Preference number: 2 (lower is better)
Translates to: VGVMLVRAGAPGVALDRSQCYPR*MRLARH
Trigger: ATGCCTGGCTAGCCTCATGCAGCGTGGATAACACTG...AGAGCGGTCCAAAGCCACACCAGGTGCTCCTGCCCTGACCAGCATGACTCCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR GCA 90 bp TTACGAGGTACCGTGCGTAGACGAGGAGCCAATGGCGGTACTCGTGGCTGGACTAAAGCGAGCGGTCCTTaGTGCCAACAGCACAGCAGC +
Preference number: 2 (lower is better)
Translates to: LRGTVRRRGANGGTRGWTKASGP*CQQHSS
Trigger: GCTGCTGTGCTGTTGGCAGCAAGGACCGCTCGCTTT...AGTCCAGCCACGAGTACCGCCATTGGCTCCTCGTCTACGCACGGTACCTCGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR GCA 90 bp GTCATGCTGGTCAGGGCAGGAGCACCTGGTGTGGCTTTGGACCGCTCTGTGAACATTGACAGAATCGCCTaGAGGTCTGGCACTGGCAGC +
Preference number: 2 (lower is better)
Translates to: VMLVRAGAPGVALDRSVNIDRIA*RSGTGS
Trigger: GCTGCCAGTGCCAGACCTGCAGGCGATTCTGTCAAT...GTTCACAGAGCGGTCCAAAGCCACACCAGGTGCTCCTGCCCTGACCAGCATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR CCA 90 bp AGCACTCTTCTGGTCCAGCTGCTGCTGCTGCTGCCTTCGCTGGTACTTGAGCATACGGCTGTGGAGAGCTaGGCCTCGGTCATGATGGCT +
Preference number: 2 (lower is better)
Translates to: STLLVQLLLLLPSLVLEHTAVES*ASVMMA
Trigger: AGCCATCATGACCGAGGCCCAGCTCTCCACAGCCGT...ATGCTCAAGTACCAGCGAAGGCAGCAGCAGCAGCAGCTGGACCAGAAGAGTGCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR GCA 90 bp GTGAGGATCCGGCTGGTGAGTACCGTCTCCCACTCCTTCCCTTCCCGGTTGCACGCAGTAGCTGTGGACTaGTATGAGAAGAGAGCATGG +
Preference number: 2 (lower is better)
Translates to: VRIRLVSTVSHSFPSRLHAVAVD*YEKRAW
Trigger: CCATGCTCTCTTCTCATAGCAGTCCACAGCTACTGC...GTGCAACCGGGAAGGGAAGGAGTGGGAGACGGTACTCACCAGCCGGATCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR CCA 90 bp TGGCTAGGCTCTTGCCATAGGTGGACTGGTGAATGCGGCTCTTCTCCTCCTCGCCTGAGCCGCAACACATaGGTCGTTCCTCCACACTCA +
Preference number: 2 (lower is better)
Translates to: WLGSCHRWTGECGSSPPRLSRNT*VVPPHS
Trigger: TGAGTGTGGAGGAACGACCCATGTGTTGCGGCTCAG...GCGAGGAGGAGAAGAGCCGCATTCACCAGTCCACCTATGGCAAGAGCCTAGCCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR GCA 90 bp ACCACAGGCTCTGTGCAAGGCTTCGAGGCGCCGAAGGAGTTAGGGGTACTGGAGTCCACACCTTTAGGCTaGGGTCATCAGCTTGAGAAG +
Preference number: 2 (lower is better)
Translates to: TTGSVQGFEAPKELGVLESTPLG*GHQLEK
Trigger: CTTCTCAAGCTGATGACCGCAGCCTAAAGGTGTGGA...CTCCAGTACCCCTAACTCCTTCGGCGCCTCGAAGCCTTGCACAGAGCCTGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR CCA 90 bp CGGCCCTGGATTATGGCTAACGGTCCTGAGCACAGCATGGCGTCCTGGGATGGCCAACAAAGTCCATGTTaGTCTTCCATCCCTCCCGTT +
Preference number: 2 (lower is better)
Translates to: RPWIMANGPEHSMASWDGQQSPC*SSIPPV
Trigger: AACGGGAGGGATGGAAGACCAACATGGACTTTGTTG...GCCATCCCAGGACGCCATGCTGTGCTCAGGACCGTTAGCCATAATCCAGGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR TCA 90 bp GGTCGCAGCACTCTTCTGGTCCAGCTGCTGCTGCTGCTGCCTTCGCTGGTACTTATCACATCGCCTGAATaGTTCCGGAGGATAGAGACA +
Preference number: 2 (lower is better)
Translates to: GRSTLLVQLLLLLPSLVLITSPE*FRRIET
Trigger: TGTCTCTATCCTCCGGAATCATTCAGGCGATGTGAT...AAGTACCAGCGAAGGCAGCAGCAGCAGCAGCTGGACCAGAAGAGTGCTGCGACC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR TCA 90 bp CTTCTTTCACCACAACCACCTGTCTGTGAACATCCCAGACAGAGAGTGTGGCTGCAAGACTCTCCCCGTTaGCAACGCCTGCGACTGAGG +
Preference number: 2 (lower is better)
Translates to: LLSPQPPVCEHPRQRVWLQDSPR*QRLRLR
Trigger: CCTCAGTCGCAGGCGTTGTCAACGGGGAGAGTCTTG...CAGCCACACTCTCTGTCTGGGATGTTCACAGACAGGTGGTTGTGGTGAAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR GCA 90 bp AAATGCTCATTATTAAACCAGCCACAGCCATGCTGGAGGCACCCTGGTTGCCTTCCAGCAAGCCCTACCTaGTCGGCACACCTGCCTGCA +
Preference number: 2 (lower is better)
Translates to: KCSLLNQPQPCWRHPGCLPASPT*SAHLPA
Trigger: TGCAGGCAGGTGTGCCGAGCAGGTAGGGCTTGCTGG...AAGGCAACCAGGGTGCCTCCAGCATGGCTGTGGCTGGTTTAATAATGAGCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR GCA 90 bp AACCGGGAGTCAAACGCTTTCATGGGTTCGATCTTGGACGGGGTCGTTAACACATGGTCCAGCTGCTGCTaGTGCTGCCTTCGCTGGTAC +
Preference number: 2 (lower is better)
Translates to: NRESNAFMGSILDGVVNTWSSCC*CCLRWY
Trigger: GTACCAGCGAAGGCAGCAGCAGCAGCAGCTGGACCA...TGTGTTAACGACCCCGTCCAAGATCGAACCCATGAAAGCGTTTGACTCCCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CAA 90 bp ACAGGAGGTTGCATAGGAGGTTGTCTAGGGAGGTCCTGGGTACCCTaGCCCCAGCCTCCCCCAATGTTAACACCTTATACACTACAGCAC +
Preference number: 2 (lower is better)
Translates to: TGGCIGGCLGRSWVP*PQPPPMLTPYTLQH
Trigger: GTGCTGTAGTGTATAAGGTGTTAACATTGGGGGAGGCTGGGGCAAGGGTACCCAGGACCTCCCTAGACAACCTCCTATGCAACCTCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
3UTR CAA 90 bp GACTTAATGCTTCCTAACAGAGCATGCAGCCGCACAATGCATACCTaGCTAAACAAGCAGGTGGCAGGGAGCGTGGCTGCACTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: DLMLPNRACSRTMHT*LNKQVAGSVAALRG
Trigger: TCCCCTCAGTGCAGCCACGCTCCCTGCCACCTGCTTGTTTAGCAAGGTATGCATTGTGCGGCTGCATGCTCTGTTAGGAAGCATTAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR CAA 90 bp AATTTCACGACAGTCACAGCTTTCCGGTGCCCAACAAAGTCCATGTaGGTCTTCCATCCCTCCCGTTCGATGATCTGGGCAGTGGGGCCT +
Preference number: 2 (lower is better)
Translates to: NFTTVTAFRCPTKSM*VFHPSRSMIWAVGP
Trigger: AGGCCCCACTGCCCAGATCATCGAACGGGAGGGATGGAAGACCAACATGGACTTTGTTGGGCACCGGAAAGCTGTGACTGTCGTGAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR TCA 90 bp ACCACAGGCTCTGTGCAAGGCTTCGAGGCGCCGAAGGAGTTAGGGGTACTGGAGTTCACACATGCTAAGTaGTTGTCCATCTGGCAAAGC +
Preference number: 2 (lower is better)
Translates to: TTGSVQGFEAPKELGVLEFTHAK*LSIWQS
Trigger: GCTTTGCCAGATGGACAATCACTTAGCATGTGTGAA...CTCCAGTACCCCTAACTCCTTCGGCGCCTCGAAGCCTTGCACAGAGCCTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR GCA 90 bp AGTCTGCACACTGAGCCAGTGAGTCCTGCTTGTCAGAAACCAGGTTCCTGCCAGGGAGAAGTCGAGGAATaGCACAGAGCCGTCCATAGA +
Preference number: 2 (lower is better)
Translates to: SLHTEPVSPACQKPGSCQGEVEE*HRAVHR
Trigger: TCTATGGACGGCTCTGTGGCATTCCTCGACTTCTCC...CTGGCAGGAACCTGGTTTCTGACAAGCAGGACTCACTGGCTCAGTGTGCAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR GCA 90 bp CTTCTTTCACCACAACCACCTGTCTGTGAACATCCCAGACAGAGAGTGTGGCTGAGGTGGACTGGTGAATaGGGCTCTTCTCCTCCTCGC +
Preference number: 2 (lower is better)
Translates to: LLSPQPPVCEHPRQRVWLRWTGE*GSSPPR
Trigger: GCGAGGAGGAGAAGAGCCGCATTCACCAGTCCACCT...CAGCCACACTCTCTGTCTGGGATGTTCACAGACAGGTGGTTGTGGTGAAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR GCA 90 bp AGTCTGCACACTGAGCCAGTGAGTCCTGCTTGTCAGAAACCAGGTTCCTGCCAGTCTTCTCCGGCCATCTaGTGTCCGAGTCTCAACTTG +
Preference number: 2 (lower is better)
Translates to: SLHTEPVSPACQKPGSCQSSPAI*CPSLNL
Trigger: CAAGTTGAGACTCGGACAGCAGATGGCCGGAGAAGA...CTGGCAGGAACCTGGTTTCTGACAAGCAGGACTCACTGGCTCAGTGTGCAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CAA 90 bp ACCTGCCATAATGCTTGGCCTCCTGGAAGCTCTAAAGCGGTGCAATaGTCCTGCAGAACATCGCAGTGTCAGGGTATCCTGCATGCAGGT +
Preference number: 2 (lower is better)
Translates to: TCHNAWPPGSSKAVQ*SCRTSQCQGILHAG
Trigger: ACCTGCATGCAGGATACCCTGACACTGCGATGTTCTGCAGGACAATTGCACCGCTTTAGAGCTTCCAGGAGGCCAAGCATTATGGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR CAA 90 bp GACCGCTCTGTGAACCGGGAGTCAAACGCTTTCATGGGTTCGATCTaGGACGGGGTCGTTAACACAGAAGGTGACAATGCAGCAGGAGTA +
Preference number: 2 (lower is better)
Translates to: DRSVNRESNAFMGSI*DGVVNTEGDNAAGV
Trigger: TACTCCTGCTGCATTGTCACCTTCTGTGTTAACGACCCCGTCCAAGATCGAACCCATGAAAGCGTTTGACTCCCGGTTCACAGAGCGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR TCA 90 bp AAATGCTCATTATTAAACCAGCCACAGCCATGCTGGAGGCACCCTGGTTGCCTTTGGGAGCCTAAGAAGTaGAGCCTGCTGGTGCAGAGG +
Preference number: 2 (lower is better)
Translates to: KCSLLNQPQPCWRHPGCLWEPKK*SLLVQR
Trigger: CCTCTGCACCAGCAGGCTTCACTTCTTAGGCTCCCA...AAGGCAACCAGGGTGCCTCCAGCATGGCTGTGGCTGGTTTAATAATGAGCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR TCA 90 bp AGTCTGCACACTGAGCCAGTGAGTCCTGCTTGTCAGAAACCAGGTTCCTGCCAGATACATCCCACTGTTTaGCCACCGCACACAGTTCAC +
Preference number: 2 (lower is better)
Translates to: SLHTEPVSPACQKPGSCQIHPTV*PPHTVH
Trigger: GTGAACTGTGTGCGGTGGTCAAACAGTGGGATGTAT...CTGGCAGGAACCTGGTTTCTGACAAGCAGGACTCACTGGCTCAGTGTGCAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR TCA 90 bp ACCGGACCCAGTAAGTCCTTGCATATTTCTCGAAGTCGGTATTCAAACCCTTCGTCTTGCTGCACCACATaGGGCACGGAGAAGAGCCGG +
Preference number: 2 (lower is better)
Translates to: TGPSKSLHISRSRYSNPSSCCTT*GTEKSR
Trigger: CCGGCTCTTCTCCGTGCCTCATGTGGTGCAGCAAGA...CGAAGGGTTTGAATACCGACTTCGAGAAATATGCAAGGACTTACTGGGTCCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR GCA 90 bp GCAGTCTTCCTCTCTTCCCTCACTGGGTGGAAATGCTCATTATTAAACCAGCCACCTGCTCGGCACACCTaGCTGCATGTGCAGTGGAAC +
Preference number: 2 (lower is better)
Translates to: AVFLSSLTGWKCSLLNQPPARHT*LHVQWN
Trigger: GTTCCACTGCACATGCAGGCAGGTGTGCCGAGCAGG...TGGCTGGTTTAATAATGAGCATTTCCACCCAGTGAGGGAAGAGAGGAAGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR GCA 90 bp AGTCTGCACACTGAGCCAGTGAGTCCTGCTTGTCAGAAACCAGGTTCCTGCCAGGTCACAGCTTTCCGGTaGCCAACAAAGTCCATGTTG +
Preference number: 2 (lower is better)
Translates to: SLHTEPVSPACQKPGSCQVTAFR*PTKSML
Trigger: CAACATGGACTTTGTTGGGCACCGGAAAGCTGTGAC...CTGGCAGGAACCTGGTTTCTGACAAGCAGGACTCACTGGCTCAGTGTGCAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR GCA 90 bp CCGGACCCAGTAAGTCCTTGCATATTTCTCGAAGTCGGTATTCAAACCCTTCGTTACTCGTGGCTGGACTaGAGGGTGAGTGCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: PDPVSPCIFLEVGIQTLRYSWLD*RVSAAA
Trigger: GGCAGCAGCACTCACCCTGCAGTCCAGCCACGAGTA...ACGAAGGGTTTGAATACCGACTTCGAGAAATATGCAAGGACTTACTGGGTCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR CCA 90 bp GAGTCAAACGCTTTCATGGGTTCGATCTTGGACGGGGTCGTTAACACAGAAGGTTGGCAAGCTTACCACTaGAGCCGAACACGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: ESNAFMGSILDGVVNTEGWQAYH*SRTRCW
Trigger: CCAGCACCGTGTTCGGCTCCAGTGGTAAGCTTGCCA...ACCTTCTGTGTTAACGACCCCGTCCAAGATCGAACCCATGAAAGCGTTTGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR CCA 90 bp AACCGGGAGTCAAACGCTTTCATGGGTTCGATCTTGGACGGGGTCGTTAACACAGGCTCTTGCCATAGGTaGACTGGTGAATGCGGCTCT +
Preference number: 2 (lower is better)
Translates to: NRESNAFMGSILDGVVNTGSCHR*TGECGS
Trigger: AGAGCCGCATTCACCAGTCCACCTATGGCAAGAGCC...TGTGTTAACGACCCCGTCCAAGATCGAACCCATGAAAGCGTTTGACTCCCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR CCA 90 bp CCGGACCCAGTAAGTCCTTGCATATTTCTCGAAGTCGGTATTCAAACCCTTCGTCACAGCATGGCGTCCTaGGATGGCAGGCTGCTCCTA +
Preference number: 2 (lower is better)
Translates to: PDPVSPCIFLEVGIQTLRHSMAS*DGRLLL
Trigger: TAGGAGCAGCCTGCCATCCCAGGACGCCATGCTGTG...ACGAAGGGTTTGAATACCGACTTCGAGAAATATGCAAGGACTTACTGGGTCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CAA 90 bp GTGCTGGGGCCGATGTACGTAGCCCGCTTCCACACCATAATCAGTTaGTCATCTCCCCCAGAAGCTAAATACATCCCACTGTTTGACCAC +
Preference number: 2 (lower is better)
Translates to: VLGPMYVARFHTIIS*SSPPEAKYIPLFDH
Trigger: GTGGTCAAACAGTGGGATGTATTTAGCTTCTGGGGGAGATGACAAACTGATTATGGTGTGGAAGCGGGCTACGTACATCGGCCCCAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR TCA 90 bp AGGAGGTTGCATAGGAGGTTGTCTAGGGAGGTCCTGGGTACCCTTGCCCCAGCCGTGTACAGCAGTTACTaGAAATGGCACTATATCACA +
Preference number: 2 (lower is better)
Translates to: RRLHRRLSREVLGTLAPAVYSSY*KWHYIT
Trigger: TGTGATATAGTGCCATTTTCAGTAACTGCTGTACAC...GGCTGGGGCAAGGGTACCCAGGACCTCCCTAGACAACCTCCTATGCAACCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
3UTR-3UTR TCA 90 bp TGCTCGGCACACCTGCCTGCATGTGCAGTGGAACTGAGCGAGTGGAGCAGAGTGTGGCTGTTTTTGCTCTaGAGAATTTCCTTGAGTTTC +
Preference number: 2 (lower is better)
Translates to: CSAHLPACAVELSEWSRVWLFLL*RISLSF
Trigger: GAAACTCAAGGAAATTCTTCAGAGCAAAAACAGCCA...CACTCTGCTCCACTCGCTCAGTTCCACTGCACATGCAGGCAGGTGTGCCGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR TCA 90 bp CATTTCTTAAAAACCAGAGTCTCCAGGGGCCGACCTGGGAGCCTAAGAAGTGAATGCTCCATGTTCCTGTaGGCAAGAGCTCACAGGGAC +
Preference number: 2 (lower is better)
Translates to: HFLKTRVSRGRPGSLRSECSMFL*ARAHRD
Trigger: GTCCCTGTGAGCTCTTGCTCACAGGAACATGGAGCA...TTCACTTCTTAGGCTCCCAGGTCGGCCCCTGGAGACTCTGGTTTTTAAGAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR TCA 90 bp GTCTTCCTCTCTTCCCTCACTGGGTGGAAATGCTCATTATTAAACCAGCCACAGCTACCATGCCCAGCCTaGCCTGGCTGCTCACAAGTA +
Preference number: 2 (lower is better)
Translates to: VFLSSLTGWKCSLLNQPQLPCPA*PGCSQV
Trigger: TACTTGTGAGCAGCCAGGTCAGGCTGGGCATGGTAG...CTGTGGCTGGTTTAATAATGAGCATTTCCACCCAGTGAGGGAAGAGAGGAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR GCA 90 bp ACCGGACCCAGTAAGTCCTTGCATATTTCTCGAAGTCGGTATTCAAACCCTTCGTCCAGCTGCTGCTGCTaGTGCCTTCGCTGGTACTTG +
Preference number: 2 (lower is better)
Translates to: TGPSKSLHISRSRYSNPSSSCCC*CLRWYL
Trigger: CAAGTACCAGCGAAGGCAGCAGCAGCAGCAGCTGGA...CGAAGGGTTTGAATACCGACTTCGAGAAATATGCAAGGACTTACTGGGTCCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR CCA 90 bp GTGAAGGAGGAGGCAAAACATGATAGTCACACTACAGAGGCAGGACTTAATGCTGACTGGGGTGCTGGCTaGCATGCCCTGGCTTTTGCT +
Preference number: 2 (lower is better)
Translates to: VKEEAKHDSHTTEAGLNADWGAG*HALAFA
Trigger: AGCAAAAGCCAGGGCATGCCAGCCAGCACCCCAGTC...AGCATTAAGTCCTGCCTCTGTAGTGTGACTATCATGTTTTGCCTCCTCCTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR CCA 90 bp TTCAAAAGATTCTTCCTGATATCTTCAAGACTCTCCCCGTTGACAACGCCTGCGGTCGCAGCACTCTTCTaGTCCAGCTGCTGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: FKRFFLISSRLSPLTTPAVAALF*SSCCCC
Trigger: GCAGCAGCAGCAGCTGGACCAGAAGAGTGCTGCGAC...CGCAGGCGTTGTCAACGGGGAGAGTCTTGAAGATATCAGGAAGAATCTTTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR CCA 90 bp CCGGACCCAGTAAGTCCTTGCATATTTCTCGAAGTCGGTATTCAAACCCTTCGTGACGGCGACCACAGGTaGAGAACACTGACAGCATCC +
Preference number: 2 (lower is better)
Translates to: PDPVSPCIFLEVGIQTLRDGDHR*RTLTAS
Trigger: GGATGCTGTCAGTGTTCTCCACCTGTGGTCGCCGTC...ACGAAGGGTTTGAATACCGACTTCGAGAAATATGCAAGGACTTACTGGGTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CAA 90 bp TGTTTCTTCAAAAGATTCTTCCTGATATCTTCAAGACTCTCCCCGTaGACAACGCCTGCGACTGAGGTGGCTGAGCCCATCTCCCTGGTC +
Preference number: 2 (lower is better)
Translates to: CFFKRFFLISSRLSP*TTPATEVAEPISLV
Trigger: GACCAGGGAGATGGGCTCAGCCACCTCAGTCGCAGGCGTTGTCAACGGGGAGAGTCTTGAAGATATCAGGAAGAATCTTTTGAAGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR TCA 90 bp TTACGAGGTACCGTGCGTAGACGAGGAGCCAATGGCGGTACTCGTGGCTGGACTTCAAAAGATTCTTCCTaGTATCTTCAAGACTCTCCC +
Preference number: 2 (lower is better)
Translates to: LRGTVRRRGANGGTRGWTSKDSS*YLQDSP
Trigger: GGGAGAGTCTTGAAGATATCAGGAAGAATCTTTTGA...AGTCCAGCCACGAGTACCGCCATTGGCTCCTCGTCTACGCACGGTACCTCGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR TCA 90 bp AGTCTGCACACTGAGCCAGTGAGTCCTGCTTGTCAGAAACCAGGTTCCTGCCAGTCATACTGTCTTTATTaGCAGAATCGCCTGCAGGTC +
Preference number: 2 (lower is better)
Translates to: SLHTEPVSPACQKPGSCQSYCLY*QNRLQV
Trigger: GACCTGCAGGCGATTCTGTCAATAAAGACAGTATGA...CTGGCAGGAACCTGGTTTCTGACAAGCAGGACTCACTGGCTCAGTGTGCAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR GCA 90 bp GTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTGTGTACAGCCCTCATGGACTGGGGTaGTGGCTGGCATGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: VFALKNFLEFHLSCCVYSPHGLG*WLACPG
Trigger: GCCAGGGCATGCCAGCCAGCACCCCAGTCCATGAGG...GCTGTACACACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR CCA 90 bp GCAGTCTTCCTCTCTTCCCTCACTGGGTGGAAATGCTCATTATTAAACCAGCCAACCAAACCTGGGACGTaGCAGGCAGTTTCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: AVFLSSLTGWKCSLLNQPTKPGT*QAVSQG
Trigger: TCCTTGGGAAACTGCCTGCCACGTCCCAGGTTTGGT...TGGCTGGTTTAATAATGAGCATTTCCACCCAGTGAGGGAAGAGAGGAAGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR CCA 90 bp GCAGTCTTCCTCTCTTCCCTCACTGGGTGGAAATGCTCATTATTAAACCAGCCAAGATGCTCCTGCTCTTaGGATCCCGTGAGCACAACC +
Preference number: 2 (lower is better)
Translates to: AVFLSSLTGWKCSLLNQPRCSCS*DPVSTT
Trigger: GGTTGTGCTCACGGGATCCCAAGAGCAGGAGCATCT...TGGCTGGTTTAATAATGAGCATTTCCACCCAGTGAGGGAAGAGAGGAAGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR CCA 90 bp ACCGGACCCAGTAAGTCCTTGCATATTTCTCGAAGTCGGTATTCAAACCCTTCGTGCGGCCCTGGATTATaGCTAACGGTCCTGAGCACA +
Preference number: 2 (lower is better)
Translates to: TGPSKSLHISRSRYSNPSCGPGL*LTVLST
Trigger: TGTGCTCAGGACCGTTAGCCATAATCCAGGGCCGCA...CGAAGGGTTTGAATACCGACTTCGAGAAATATGCAAGGACTTACTGGGTCCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR TCA 90 bp AAATGCTCATTATTAAACCAGCCACAGCCATGCTGGAGGCACCCTGGTTGCCTTCAACTTGAAACAGACTaGGGAAGCTGCACAGGCCAA +
Preference number: 2 (lower is better)
Translates to: KCSLLNQPQPCWRHPGCLQLETD*GSCTGQ
Trigger: TTGGCCTGTGCAGCTTCCTCAGTCTGTTTCAAGTTG...AAGGCAACCAGGGTGCCTCCAGCATGGCTGTGGCTGGTTTAATAATGAGCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR TCA 90 bp CTTCTTTCACCACAACCACCTGTCTGTGAACATCCCAGACAGAGAGTGTGGCTGATCCATCACATCGCCTaGATGATTCCGGAGGATAGA +
Preference number: 2 (lower is better)
Translates to: LLSPQPPVCEHPRQRVWLIHHIA*MIPEDR
Trigger: TCTATCCTCCGGAATCATTCAGGCGATGTGATGGAT...CAGCCACACTCTCTGTCTGGGATGTTCACAGACAGGTGGTTGTGGTGAAAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR TCA 90 bp GATGGATTTGTCAAACAGTTCATGGATGACCACCAGCGGCCGTTTCAGACATGTCCCATGTCAACCCTTTaGCCAAGCCAGAATGACCTC +
Preference number: 2 (lower is better)
Translates to: DGFVKQFMDDHQRPFQTCPMSTL*PSQNDL
Trigger: GAGGTCATTCTGGCTTGGTCAAAGGGTTGACATGGG...ACATGTCTGAAACGGCCGCTGGTGGTCATCCATGAACTGTTTGACAAATCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR GCA 90 bp GCAGTCTTCCTCTCTTCCCTCACTGGGTGGAAATGCTCATTATTAAACCAGCCACAGTCCCCAGGGCTGTaGAACAGCAACTTGAAACAG +
Preference number: 2 (lower is better)
Translates to: AVFLSSLTGWKCSLLNQPQSPGL*NSNLKQ
Trigger: CTGTTTCAAGTTGCTGTTGCACAGCCCTGGGGACTG...TGGCTGGTTTAATAATGAGCATTTCCACCCAGTGAGGGAAGAGAGGAAGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR GCA 90 bp TACTCAGTTTCCCCAGTTACATCTGTACTCCTTTGTGTACCTAACTCTACACAAAGAGAGCAGGGAGGGTaGTGGGCACAGACCCAGCCT +
Preference number: 2 (lower is better)
Translates to: YSVSPVTSVLLCVPNSTQREQGG*WAQTQP
Trigger: AGGCTGGGTCTGTGCCCAGCACCCTCCCTGCTCTCT...TTGTGTAGAGTTAGGTACACAAAGGAGTACAGATGTAACTGGGGAAACTGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR TCA 90 bp CAGCACAGCATCAGGACGCAGAAATTGACATTGGTACAGTCTACAGAACATACTCATGTGCAGTGGAACTaGGCGAGTGGAGCAGAGTGT +
Preference number: 2 (lower is better)
Translates to: QHSIRTQKLTLVQSTEHTHVQWN*ASGAEC
Trigger: ACACTCTGCTCCACTCGCTCAGTTCCACTGCACATG...AGTATGTTCTGTAGACTGTACCAATGTCAATTTCTGCGTCCTGATGCTGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR TCA 90 bp TACTCAGTTTCCCCAGTTACATCTGTACTCCTTTGTGTACCTAACTCTACACAATCTGCCCCAGGAACCTaGAGGCAGCTGCTGCAATCC +
Preference number: 2 (lower is better)
Translates to: YSVSPVTSVLLCVPNSTQSAPGT*RQLLQS
Trigger: GGATTGCAGCAGCTGCCTTCAGGTTCCTGGGGCAGA...TTGTGTAGAGTTAGGTACACAAAGGAGTACAGATGTAACTGGGGAAACTGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR GCA 90 bp AAATGCTCATTATTAAACCAGCCACAGCCATGCTGGAGGCACCCTGGTTGCCTTAGATTCACAGGAGGTTaGATAGGAGGTTGTCTAGGG +
Preference number: 2 (lower is better)
Translates to: KCSLLNQPQPCWRHPGCLRFTGG*IGGCLG
Trigger: CCCTAGACAACCTCCTATGCAACCTCCTGTGAATCT...AAGGCAACCAGGGTGCCTCCAGCATGGCTGTGGCTGGTTTAATAATGAGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR GCA 90 bp GTTAACACCTTATACACTACAGCACAGCATCAGGACGCAGAAATTGACATTGGTGACCGCCATCTCCTATaGTACCATGCCCAGCCTGAC +
Preference number: 2 (lower is better)
Translates to: VNTLYTTAQHQDAEIDIGDRHLL*YHAQPD
Trigger: GTCAGGCTGGGCATGGTAGCATAGGAGATGGCGGTC...ACCAATGTCAATTTCTGCGTCCTGATGCTGTGCTGTAGTGTATAAGGTGTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR CCA 90 bp GTTTCATCTGAGTTGCTGTGTGTACAGCAGTTACTGAAAATGGCACTATATCACCCAGACTGTGTAGGCTaGTCACAGTCCCCAGGGCTG +
Preference number: 2 (lower is better)
Translates to: VSSELLCVQQLLKMALYHPDCVG*SQSPGL
Trigger: CAGCCCTGGGGACTGTGACCAGCCTACACAGTCTGG...GTGATATAGTGCCATTTTCAGTAACTGCTGTACACACAGCAACTCAGATGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR CCA 90 bp GTTAACACCTTATACACTACAGCACAGCATCAGGACGCAGAAATTGACATTGGTATGCCCAGCCTGACCTaGCTGCTCACAAGTACCTGC +
Preference number: 2 (lower is better)
Translates to: VNTLYTTAQHQDAEIDIGMPSLT*LLTSTC
Trigger: GCAGGTACTTGTGAGCAGCCAGGTCAGGCTGGGCAT...ACCAATGTCAATTTCTGCGTCCTGATGCTGTGCTGTAGTGTATAAGGTGTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR TCA 90 bp GTGAAGGAGGAGGCAAAACATGATAGTCACACTACAGAGGCAGGACTTAATGCTAACCACCAGTCAGGCTaGCAGATGGTTTTCAACACC +
Preference number: 2 (lower is better)
Translates to: VKEEAKHDSHTTEAGLNANHQSG*QMVFNT
Trigger: GGTGTTGAAAACCATCTGTCAGCCTGACTGGTGGTT...AGCATTAAGTCCTGCCTCTGTAGTGTGACTATCATGTTTTGCCTCCTCCTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR TCA 90 bp CCGGACCCAGTAAGTCCTTGCATATTTCTCGAAGTCGGTATTCAAACCCTTCGTTTGACCAAGCCAGAATaGCCTCTCAGAGTAGCTAGA +
Preference number: 2 (lower is better)
Translates to: PDPVSPCIFLEVGIQTLRLTKPE*PLRVAR
Trigger: TCTAGCTACTCTGAGAGGTCATTCTGGCTTGGTCAA...ACGAAGGGTTTGAATACCGACTTCGAGAAATATGCAAGGACTTACTGGGTCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR TCA 90 bp ACGCTTTCATGGGTTCGATCTTGGACGGGGTCGTTAACACAGAAGGTGACAATGCTGCGGTCATCAGCTTaGGAAGCTATGTATTTACCA +
Preference number: 2 (lower is better)
Translates to: TLSWVRSWTGSLTQKVTMLRSSA*EAMYLP
Trigger: TGGTAAATACATAGCTTCTCAAGCTGATGACCGCAG...CATTGTCACCTTCTGTGTTAACGACCCCGTCCAAGATCGAACCCATGAAAGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR GCA 90 bp TACTCAGTTTCCCCAGTTACATCTGTACTCCTTTGTGTACCTAACTCTACACAAAGTGTCAGGGTATCCTaGATGCAGGTGAGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: YSVSPVTSVLLCVPNSTQSVRVS*MQVRGG
Trigger: CCCACCCCTCACCTGCATGCAGGATACCCTGACACT...TTGTGTAGAGTTAGGTACACAAAGGAGTACAGATGTAACTGGGGAAACTGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR CCA 90 bp CAGCACAGCATCAGGACGCAGAAATTGACATTGGTACAGTCTACAGAACATACTATGATGGGGGAACGCTaGCTCCTCTTTAGATGCTCC +
Preference number: 2 (lower is better)
Translates to: QHSIRTQKLTLVQSTEHTMMGER*LLFRCS
Trigger: GGAGCATCTAAAGAGGAGCCAGCGTTCCCCCATCAT...AGTATGTTCTGTAGACTGTACCAATGTCAATTTCTGCGTCCTGATGCTGTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR CAA 90 bp TTCTTCTTCTTCTCTACTGTCTCTACCTCAAGCTCAAGTTTTCGCTaGGACAGTGAGGAAGCCTTAGCCAAAGGGACTTTCTCATCGCTG +
Preference number: 2 (lower is better)
Translates to: FFFFSTVSTSSSSFR*DSEEALAKGTFSSL
Trigger: CAGCGATGAGAAAGTCCCTTTGGCTAAGGCTTCCTCACTGTCCAAGCGAAAACTTGAGCTTGAGGTAGAGACAGTAGAGAAGAAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR TCA 90 bp GCAGTCTTCCTCTCTTCCCTCACTGGGTGGAAATGCTCATTATTAAACCAGCCATCCTTGAGTTTCATCTaGGTTGCTGTGTGTACAGCA +
Preference number: 2 (lower is better)
Translates to: AVFLSSLTGWKCSLLNQPSLSFI*VAVCTA
Trigger: TGCTGTACACACAGCAACTCAGATGAAACTCAAGGA...TGGCTGGTTTAATAATGAGCATTTCCACCCAGTGAGGGAAGAGAGGAAGACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR GCA 90 bp TGTCTGTTTCAAAACTGTGGTCTTATAAGCCTCAAACCCTGTCCAACATGTGGAGCGGTGCAATTGTCCTaGAGAACATCGCAGTGTCAG +
Preference number: 2 (lower is better)
Translates to: CLFQNCGLISLKPCPTCGAVQLS*RTSQCQ
Trigger: CTGACACTGCGATGTTCTGCAGGACAATTGCACCGC...TCCACATGTTGGACAGGGTTTGAGGCTTATAAGACCACAGTTTTGAAACAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR GCA 90 bp ACAAATGCAGGAACATCCTGTCCAGAGAGATTATCTGTTGATGTGGAACTTGAGCTCTTTAGATGCTCCTaGTCTTGGGATCCCGTGAGC +
Preference number: 2 (lower is better)
Translates to: TNAGTSCPERLSVDVELELFRCS*SWDPVS
Trigger: GCTCACGGGATCCCAAGAGCAGGAGCATCTAAAGAG...CTCAAGTTCCACATCAACAGATAATCTCTCTGGACAGGATGTTCCTGCATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR CCA 90 bp CATTTCTTAAAAACCAGAGTCTCCAGGGGCCGACCTGGGAGCCTAAGAAGTGAAGAAAGACATTCACAGTaGCACAACTGTTTAGCTACC +
Preference number: 2 (lower is better)
Translates to: HFLKTRVSRGRPGSLRSEERHSQ*HNCLAT
Trigger: GGTAGCTAAACAGTTGTGCCACTGTGAATGTCTTTC...TTCACTTCTTAGGCTCCCAGGTCGGCCCCTGGAGACTCTGGTTTTTAAGAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR CCA 90 bp TGGTACAGTCTACAGAACATACTCAGTTTCCCCAGTTACATCTGTACTCCTTTGAATGCTCACCAAACCTaGGACGTGGCAGGCAGTTTC +
Preference number: 2 (lower is better)
Translates to: WYSLQNILSFPSYICTPLNAHQT*DVAGSF
Trigger: GAAACTGCCTGCCACGTCCCAGGTTTGGTGAGCATT...CAAAGGAGTACAGATGTAACTGGGGAAACTGAGTATGTTCTGTAGACTGTACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR TCA 90 bp CAGCACAGCATCAGGACGCAGAAATTGACATTGGTACAGTCTACAGAACATACTTTAGCTACCTCATTATaGCCCACCTGTGTGTCCACA +
Preference number: 2 (lower is better)
Translates to: QHSIRTQKLTLVQSTEHTLATSL*PTCVST
Trigger: TGTGGACACACAGGTGGGTCATAATGAGGTAGCTAA...AGTATGTTCTGTAGACTGTACCAATGTCAATTTCTGCGTCCTGATGCTGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR TCA 90 bp AACCGGGAGTCAAACGCTTTCATGGGTTCGATCTTGGACGGGGTCGTTAACACATCCAGGAAATATCCATaGTGGATTTGTCAAACAGTT +
Preference number: 2 (lower is better)
Translates to: NRESNAFMGSILDGVVNTSRKYP*WICQTV
Trigger: AACTGTTTGACAAATCCATCATGGATATTTCCTGGA...TGTGTTAACGACCCCGTCCAAGATCGAACCCATGAAAGCGTTTGACTCCCGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR TCA 90 bp ACAAATGCAGGAACATCCTGTCCAGAGAGATTATCTGTTGATGTGGAACTTGAGTGTGCAACAGCAACTTaGAACAGACTGAGGAAGCTG +
Preference number: 2 (lower is better)
Translates to: TNAGTSCPERLSVDVELECATAT*NRLRKL
Trigger: CAGCTTCCTCAGTCTGTTTCAAGTTGCTGTTGCACA...CTCAAGTTCCACATCAACAGATAATCTCTCTGGACAGGATGTTCCTGCATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR GCA 90 bp ACAACTTGTCTGTTTCAAAACTGTGGTCTTATAAGCCTCAAACCCTGTCCAACACTGCTCACAAGTACCTaGCATAATGCTTGGCCTCCT +
Preference number: 2 (lower is better)
Translates to: TTCLFQNCGLISLKPCPTLLTST*HNAWPP
Trigger: AGGAGGCCAAGCATTATGGCAGGTACTTGTGAGCAG...TGTTGGACAGGGTTTGAGGCTTATAAGACCACAGTTTTGAAACAGACAAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR GCA 90 bp TCCTGCTACATGTATGTTTTCAAGATTGGCTGTTTTTGCTCTGAAGAATTTCCTACACCTGCCTGCATGTaGAGTGGAACTGAGCGAGTG +
Preference number: 2 (lower is better)
Translates to: SCYMYVFKIGCFCSEEFPTPACM*SGTERV
Trigger: CACTCGCTCAGTTCCACTGCACATGCAGGCAGGTGT...AGGAAATTCTTCAGAGCAAAAACAGCCAATCTTGAAAACATACATGTAGCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR GCA 90 bp GTCTTCCTCTCTTCCCTCACTGGGTGGAAATGCTCATTATTAAACCAGCCACAGAAAAGATATTCAACTTaGTGCCTGTGTCCAGGAAGA +
Preference number: 2 (lower is better)
Translates to: VFLSSLTGWKCSLLNQPQKRYST*CLCPGR
Trigger: TCTTCCTGGACACAGGCAGCAAGTTGAATATCTTTT...CTGTGGCTGGTTTAATAATGAGCATTTCCACCCAGTGAGGGAAGAGAGGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR GCA 90 bp ACAACTTGTCTGTTTCAAAACTGTGGTCTTATAAGCCTCAAACCCTGTCCAACATGGAGGCACCCTGGTTaGCTTAGACACATCAGTACT +
Preference number: 2 (lower is better)
Translates to: TTCLFQNCGLISLKPCPTWRHPG*LRHIST
Trigger: AGTACTGATGTGTCTAAGGCAACCAGGGTGCCTCCA...TGTTGGACAGGGTTTGAGGCTTATAAGACCACAGTTTTGAAACAGACAAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR GCA 90 bp CAGCACAGCATCAGGACGCAGAAATTGACATTGGTACAGTCTACAGAACATACTATCCCAGGCATCACATaGAGGCTGCAAACTCATTTT +
Preference number: 2 (lower is better)
Translates to: QHSIRTQKLTLVQSTEHTIPGIT*RLQTHF
Trigger: AAAATGAGTTTGCAGCCTGCATGTGATGCCTGGGAT...AGTATGTTCTGTAGACTGTACCAATGTCAATTTCTGCGTCCTGATGCTGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR CCA 90 bp GTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTGTGTACAGCAGCCTCCGAAGTAGCTaGAACTACAAATGCACGCCA +
Preference number: 2 (lower is better)
Translates to: VFALKNFLEFHLSCCVYSSLRSS*NYKCTP
Trigger: TGGCGTGCATTTGTAGTTCCAGCTACTTCGGAGGCT...GCTGTACACACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR TCA 90 bp GTTAACACCTTATACACTACAGCACAGCATCAGGACGCAGAAATTGACATTGGTTCCTTGAGTTTCATCTaGGTTGCTGTGTGTACAGCA +
Preference number: 2 (lower is better)
Translates to: VNTLYTTAQHQDAEIDIGSLSFI*VAVCTA
Trigger: TGCTGTACACACAGCAACTCAGATGAAACTCAAGGA...ACCAATGTCAATTTCTGCGTCCTGATGCTGTGCTGTAGTGTATAAGGTGTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
3UTR-3UTR CCA 90 bp AAATGCTCATTATTAAACCAGCCACAGCCATGCTGGAGGCACCCTGGTTGCCTTCCAATGTTACATAAATaGAATCCTGCTACATGTATG +
Preference number: 2 (lower is better)
Translates to: KCSLLNQPQPCWRHPGCLPMLHK*NPATCM
Trigger: CATACATGTAGCAGGATTCCATTTATGTAACATTGG...AAGGCAACCAGGGTGCCTCCAGCATGGCTGTGGCTGGTTTAATAATGAGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR CCA 90 bp GCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTGTGTACACCTGCCATAATGCTTaGCCTCCTGGAAGCTCTAAA +
Preference number: 2 (lower is better)
Translates to: AVFALKNFLEFHLSCCVYTCHNA*PPGSSK
Trigger: TTTAGAGCTTCCAGGAGGCCAAGCATTATGGCAGGT...GTACACACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR GCA 90 bp TCCTGCTACATGTATGTTTTCAAGATTGGCTGTTTTTGCTCTGAAGAATTTCCTTGTGAGCACTCACAATaGTCACCAAACCTGGGACGT +
Preference number: 2 (lower is better)
Translates to: SCYMYVFKIGCFCSEEFPCEHSQ*SPNLGR
Trigger: ACGTCCCAGGTTTGGTGAGCATTGTGAGTGCTCACA...AGGAAATTCTTCAGAGCAAAAACAGCCAATCTTGAAAACATACATGTAGCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR CAA 90 bp AGCCGTGAGCCACCACATCCAGCCACCGTTTTAAATTCCTATTTATaGATGTTTAATGTCTGTCTTTTACCCAAACTACAACAGAAACTC +
Preference number: 2 (lower is better)
Translates to: SREPPHPATVLNSYL*MFNVCLLPKLQQKL
Trigger: GAGTTTCTGTTGTAGTTTGGGTAAAAGACAGACATTAAACATCAATAAATAGGAATTTAAAACGGTGGCTGGATGTGGTGGCTCACGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR TCA 90 bp TGGTACAGTCTACAGAACATACTCAGTTTCCCCAGTTACATCTGTACTCCTTTGACAACAGAAACTCTTTaGAGACAACTTGTCTGTTTC +
Preference number: 2 (lower is better)
Translates to: WYSLQNILSFPSYICTPLTTETL*RQLVCF
Trigger: GAAACAGACAAGTTGTCTTCAAAGAGTTTCTGTTGT...CAAAGGAGTACAGATGTAACTGGGGAAACTGAGTATGTTCTGTAGACTGTACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR GCA 90 bp CAGCACAGCATCAGGACGCAGAAATTGACATTGGTACAGTCTACAGAACATACTGCATCACATGCAGGCTaGAAACTCATTTTATTATTT +
Preference number: 2 (lower is better)
Translates to: QHSIRTQKLTLVQSTEHTASHAG*KLILLF
Trigger: AAATAATAAAATGAGTTTGCAGCCTGCATGTGATGC...AGTATGTTCTGTAGACTGTACCAATGTCAATTTCTGCGTCCTGATGCTGTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR TCA 90 bp AGATTGGCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTGTGTACAGCAGTTACTaGAAATGGCACTATATCACA +
Preference number: 2 (lower is better)
Translates to: RLAVFALKNFLEFHLSCCVYSSY*KWHYIT
Trigger: TGTGATATAGTGCCATTTTCAGTAACTGCTGTACAC...ACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGCCAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
3UTR CAA 90 bp CCAATGTTACATAAATGGAATCCTGCTACATGTATGTTTTCAAGATaGGCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGT +
Preference number: 2 (lower is better)
Translates to: PMLHKWNPATCMFSR*AVFALKNFLEFHLS
Trigger: ACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGCCAATCTTGAAAACATACATGTAGCAGGATTCCATTTATGTAACATTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
3UTR CCA 72 bp AGGGGCCGACCTGGGAGCCTAAGAAGTGAAGCCTGCTaGTGCAGAGGGGCCAGCAAGCCCTACCTGCTCGGC +
Preference number: 3 (lower is better)
Translates to: RGRPGSLRSEAC*CRGASKPYLLG
Trigger: GCCGAGCAGGTAGGGCTTGCTGGCCCCTCTGCACCAGCAGGCTTCACTTCTTAGGCTCCCAGGTCGGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR GCA 72 bp TCCAGGGGCCGACCTGGGAGCCTAAGAAGTGAAGCCTaGTGGTGCAGAGGGGCCAGCAAGCCCTACCTGCTC +
Preference number: 3 (lower is better)
Translates to: SRGRPGSLRSEA*WCRGASKPYLL
Trigger: GAGCAGGTAGGGCTTGCTGGCCCCTCTGCACCAGCAGGCTTCACTTCTTAGGCTCCCAGGTCGGCCCCTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR TCA 72 bp CAGAGTCTCCAGGGGCCGACCTGGGAGCCTAAGAAGTaGAGCCTGCTGGTGCAGAGGGGCCAGCAAGCCCTA +
Preference number: 3 (lower is better)
Translates to: QSLQGPTWEPKK*SLLVQRGQQAL
Trigger: TAGGGCTTGCTGGCCCCTCTGCACCAGCAGGCTTCACTTCTTAGGCTCCCAGGTCGGCCCCTGGAGACTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR GCA 72 bp GGGGCCAGCAAGCCCTACCTGCTCGGCACACCTGCCTaGATGTGCAGTGGAACTGAGCGAGTGGAGCAGAGT +
Preference number: 3 (lower is better)
Translates to: GASKPYLLGTPA*MCSGTERVEQS
Trigger: ACTCTGCTCCACTCGCTCAGTTCCACTGCACATGCAGGCAGGTGTGCCGAGCAGGTAGGGCTTGCTGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR CCA 72 bp GTGGCTGAGCCCATCTCCCTGGTCGCAGCACTCTTCTaGTCCAGCTGCTGCTGCTGCTGCCTTCGCTGGTAC +
Preference number: 3 (lower is better)
Translates to: VAEPISLVAALF*SSCCCCCLRWY
Trigger: GTACCAGCGAAGGCAGCAGCAGCAGCAGCTGGACCAGAAGAGTGCTGCGACCAGGGAGATGGGCTCAGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CCA 72 bp CCTGCCTTCCCGAGTTGGAGGTGCGGCCCTGGATTATaGCTAACGGTCCTGAGCACAGCATGGCGTCCTGGG +
Preference number: 3 (lower is better)
Translates to: PAFPSWRCGPGL*LTVLSTAWRPG
Trigger: CCCAGGACGCCATGCTGTGCTCAGGACCGTTAGCCATAATCCAGGGCCGCACCTCCAACTCGGGAAGGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR TCA 72 bp GGAGCCAATGGCGGTACTCGTGGCTGGACTGCAGGGTaGGTGCTGCTGCCACCTGGTTCTCTAGGTAGGCCA +
Preference number: 3 (lower is better)
Translates to: GANGGTRGWTAG*VLLPPGSLGRP
Trigger: TGGCCTACCTAGAGAACCAGGTGGCAGCAGCACTCACCCTGCAGTCCAGCCACGAGTACCGCCATTGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR GCA 72 bp AGCAAGCCCTACCTGCTCGGCACACCTGCCTGCATGTaGAGTGGAACTGAGCGAGTGGAGCAGAGTGTGAGC +
Preference number: 3 (lower is better)
Translates to: SKPYLLGTPACM*SGTERVEQSVS
Trigger: GCTCACACTCTGCTCCACTCGCTCAGTTCCACTGCACATGCAGGCAGGTGTGCCGAGCAGGTAGGGCTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR GCA 72 bp ATGATGGGGGAACGCTGGCTCCTCTTTAGATGCTCCTaGTCTTGGGATCCCGTGAGCACAACCCCCACCCCC +
Preference number: 3 (lower is better)
Translates to: MMGERWLLFRCS*SWDPVSTTPTP
Trigger: GGGGGTGGGGGTTGTGCTCACGGGATCCCAAGAGCAGGAGCATCTAAAGAGGAGCCAGCGTTCCCCCATCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR GCA 72 bp CCCCTGATGATGGGGGAACGCTGGCTCCTCTTTAGATaGTCCTGCTCTTGGGATCCCGTGAGCACAACCCCC +
Preference number: 3 (lower is better)
Translates to: PLMMGERWLLFR*SCSWDPVSTTP
Trigger: GGGGGTTGTGCTCACGGGATCCCAAGAGCAGGAGCATCTAAAGAGGAGCCAGCGTTCCCCCATCATCAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR CAA 90 bp ACGTCACAGCTGCCCGCAGCAGTGAGGATCCGGCTGGTGAGTACCGTCTCCCACCCAACAAAGTCCATGTaGGTCTTCCATCCCTCCCGT +
Preference number: 3 (lower is better)
Translates to: TSQLPAAVRIRLVSTVSHPTKSM*VFHPSR
Trigger: ACGGGAGGGATGGAAGACCAACATGGACTTTGTTGG...GTGGGAGACGGTACTCACCAGCCGGATCCTCACTGCTGCGGGCAGCTGTGACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR TCA 72 bp CCTGCTCGGCACACCTGCCTGCATGTGCAGTGGAACTaGGCGAGTGGAGCAGAGTGTGAGCACTCACAATGC +
Preference number: 3 (lower is better)
Translates to: PARHTCLHVQWN*ASGAECEHSQC
Trigger: GCATTGTGAGTGCTCACACTCTGCTCCACTCGCTCAGTTCCACTGCACATGCAGGCAGGTGTGCCGAGCAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR TCA 72 bp CATGGCATGGGCAGACACCAGGTAATGCCCATCAGGTaGCCAGCTGAGCCGCAACACATGGGTCGTTCCTCC +
Preference number: 3 (lower is better)
Translates to: HGMGRHQVMPIR*PAEPQHMGRSS
Trigger: GGAGGAACGACCCATGTGTTGCGGCTCAGCTGGTCACCTGATGGGCATTACCTGGTGTCTGCCCATGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR TCA 72 bp GGGCAGCTGGAGACTGGACAGACAGAGACACAGGCATaGGACGAGAGTCCTTCCGAGGCCGCCCTTTCTTCT +
Preference number: 3 (lower is better)
Translates to: GQLETGQTETQA*DESPSEAALSS
Trigger: AGAAGAAAGGGCGGCCTCGGAAGGACTCTCGTCTCATGCCTGTGTCTCTGTCTGTCCAGTCTCCAGCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR GCA 72 bp CACCTGTCTGTGAACATCCCAGACAGAGAGTGTGGCTaGAGCGGTGAGCGCCATGACGTAGGAGCCTGTGCA +
Preference number: 3 (lower is better)
Translates to: HLSVNIPDRECG*SGERHDVGACA
Trigger: TGCACAGGCTCCTACGTCATGGCGCTCACCGCTGCAGCCACACTCTCTGTCTGGGATGTTCACAGACAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CCA 72 bp GCAAGAGCTCACAGGGACCCACCAGACTGTGTAGGCTaGTCACAGTCCCCAGGGCTGTGCAACAGCAACTTG +
Preference number: 3 (lower is better)
Translates to: ARAHRDPPDCVG*SQSPGLCNSNL
Trigger: CAAGTTGCTGTTGCACAGCCCTGGGGACTGTGACCAGCCTACACAGTCTGGTGGGTCCCTGTGAGCTCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR CCA 72 bp GTGCTGCTGCCACCTGGTTCTCTAGGTAGGCCAGGGTaGTCTCTTGCTGCACCACATGAGGCACGGAGAAGA +
Preference number: 3 (lower is better)
Translates to: VLLPPGSLGRPG*SLAAPHEARRR
Trigger: TCTTCTCCGTGCCTCATGTGGTGCAGCAAGAGACCACCCTGGCCTACCTAGAGAACCAGGTGGCAGCAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR TCA 72 bp GGGCAGACACCAGGTAATGCCCATCAGGTGACCAGCTaGGCCGCAACACATGGGTCGTTCCTCCACACTCAT +
Preference number: 3 (lower is better)
Translates to: GQTPGNAHQVTS*AATHGSFLHTH
Trigger: ATGAGTGTGGAGGAACGACCCATGTGTTGCGGCTCAGCTGGTCACCTGATGGGCATTACCTGGTGTCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR TCA 72 bp CCATCCCTCCCGTTCGATGATCTGGGCAGTGGGGCCTaGGTTGTTCATGGCATGGGCAGACACCAGGTAATG +
Preference number: 3 (lower is better)
Translates to: PSLPFDDLGSGA*VVHGMGRHQVM
Trigger: CATTACCTGGTGTCTGCCCATGCCATGAACAACTCAGGCCCCACTGCCCAGATCATCGAACGGGAGGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR TCA 72 bp GGGCAGGAGCACCTGGTGTGGCTTTGGACCGCTCTGTaGACCGGGAGTCAAACGCTTTCATGGGTTCGATCT +
Preference number: 3 (lower is better)
Translates to: GQEHLVWLWTAL*TGSQTLSWVRS
Trigger: AGATCGAACCCATGAAAGCGTTTGACTCCCGGTTCACAGAGCGGTCCAAAGCCACACCAGGTGCTCCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CCA 72 bp CTGGGGGCTTGGAATTGGCAGCTTCAGTGCAAGTGCTaGTGCAGACAGACACATGGCCTCCTTCTCTGCGGT +
Preference number: 3 (lower is better)
Translates to: LGAWNWQLQCKC*CRQTHGLLLCG
Trigger: ACCGCAGAGAAGGAGGCCATGTGTCTGTCTGCACCAGCACTTGCACTGAAGCTGCCAATTCCAAGCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR TCA 72 bp GTCCCCAGGGCTGTGCAACAGCAACTTGAAACAGACTaGGGAAGCTGCACAGGCCAATGGCAGGGATGCTTG +
Preference number: 3 (lower is better)
Translates to: VPRAVQQQLETD*GSCTGQWQGCL
Trigger: CAAGCATCCCTGCCATTGGCCTGTGCAGCTTCCTCAGTCTGTTTCAAGTTGCTGTTGCACAGCCCTGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR TCA 72 bp CATGGGTCGTTCCTCCACACTCATCAAAAGGCTTGGTaGTGCTGGTCTCCAACTGCCAGTCCAGCGTCCTCC +
Preference number: 3 (lower is better)
Translates to: HGSFLHTHQKAW*CWSPTASPASS
Trigger: GGAGGACGCTGGACTGGCAGTTGGAGACCAGCATCACCAAGCCTTTTGATGAGTGTGGAGGAACGACCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR GCA 72 bp CACTCATCAAAAGGCTTGGTGATGCTGGTCTCCAACTaGCAGTCCAGCGTCCTCCACACCTTTAGGCTGCGG +
Preference number: 3 (lower is better)
Translates to: HSSKGLVMLVSN*QSSVLHTFRLR
Trigger: CCGCAGCCTAAAGGTGTGGAGGACGCTGGACTGGCAGTTGGAGACCAGCATCACCAAGCCTTTTGATGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR GCA 72 bp TCTCTGGGGGCTTGGAATTGGCAGCTTCAGTGCAAGTaGTGGTGCAGACAGACACATGGCCTCCTTCTCTGC +
Preference number: 3 (lower is better)
Translates to: SLGAWNWQLQCK*WCRQTHGLLLC
Trigger: GCAGAGAAGGAGGCCATGTGTCTGTCTGCACCAGCACTTGCACTGAAGCTGCCAATTCCAAGCCCCCAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CCA 72 bp ACAGGAGGTTGCATAGGAGGTTGTCTAGGGAGGTCCTaGGTACCCTTGCCCCAGCCTCCCCCAATGTTAACA +
Preference number: 3 (lower is better)
Translates to: TGGCIGGCLGRS*VPLPQPPPMLT
Trigger: TGTTAACATTGGGGGAGGCTGGGGCAAGGGTACCCAGGACCTCCCTAGACAACCTCCTATGCAACCTCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
3UTR CCA 72 bp TCCATGTTGGTCTTCCATCCCTCCCGTTCGATGATCTaGGCAGTGGGGCCTGAGTTGTTCATGGCATGGGCA +
Preference number: 3 (lower is better)
Translates to: SMLVFHPSRSMI*AVGPELFMAWA
Trigger: TGCCCATGCCATGAACAACTCAGGCCCCACTGCCCAGATCATCGAACGGGAGGGATGGAAGACCAACATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CCA 72 bp GCTCTTTTAACCTTTCCACAGCTGTCGGAGTCATGCTaGTCAGGGCAGGAGCACCTGGTGTGGCTTTGGACC +
Preference number: 3 (lower is better)
Translates to: ALLTFPQLSESC*SGQEHLVWLWT
Trigger: GGTCCAAAGCCACACCAGGTGCTCCTGCCCTGACCAGCATGACTCCGACAGCTGTGGAAAGGTTAAAAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR CAA 90 bp ACCGGACCCAGTAAGTCCTTGCATATTTCTCGAAGTCGGTATTCAAACCCTTCGGCCTGCCTTCCCGAGTaGGAGGTGCGGCCCTGGATT +
Preference number: 3 (lower is better)
Translates to: TGPSKSLHISRSRYSNPSACLPE*EVRPWI
Trigger: AATCCAGGGCCGCACCTCCAACTCGGGAAGGCAGGC...CGAAGGGTTTGAATACCGACTTCGAGAAATATGCAAGGACTTACTGGGTCCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR TCA 72 bp TCAGGACCGCCATCTCCTATGCTACCATGCCCAGCCTaGCCTGGCTGCTCACAAGTACCTGCCATAATGCTT +
Preference number: 3 (lower is better)
Translates to: SGPPSPMLPCPA*PGCSQVPAIML
Trigger: AAGCATTATGGCAGGTACTTGTGAGCAGCCAGGTCAGGCTGGGCATGGTAGCATAGGAGATGGCGGTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR TCA 72 bp TCCTGGGATGGCAGGCTGCTCCTAAAGTCTGCACACTaGGCCAGTGAGTCCTGCTTGTCAGAAACCAGGTTC +
Preference number: 3 (lower is better)
Translates to: SWDGRLLLKSAH*ASESCLSETRF
Trigger: GAACCTGGTTTCTGACAAGCAGGACTCACTGGCTCAGTGTGCAGACTTTAGGAGCAGCCTGCCATCCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR GCA 72 bp TTAAACCAGCCACAGCCATGCTGGAGGCACCCTGGTTaGCTTAGACACATCAGTACTCCCCTGATGATGGGG +
Preference number: 3 (lower is better)
Translates to: LNQPQPCWRHPG*LRHISTPLMMG
Trigger: CCCCATCATCAGGGGAGTACTGATGTGTCTAAGGCAACCAGGGTGCCTCCAGCATGGCTGTGGCTGGTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR GCA 72 bp TCTGCTCTTTTAACCTTTCCACAGCTGTCGGAGTCATaGTGGTCAGGGCAGGAGCACCTGGTGTGGCTTTGG +
Preference number: 3 (lower is better)
Translates to: SALLTFPQLSES*WSGQEHLVWLW
Trigger: CCAAAGCCACACCAGGTGCTCCTGCCCTGACCAGCATGACTCCGACAGCTGTGGAAAGGTTAAAAGAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR CAA 90 bp ACACCTGCCTGCATGTGCAGTGGAACTGAGCGAGTGGAGCAGAGTGTGAGCACTTCTAAAGCGGTGCAATaGTCCTGCAGAACATCGCAG +
Preference number: 3 (lower is better)
Translates to: TPACMCSGTERVEQSVSTSKAVQ*SCRTSQ
Trigger: CTGCGATGTTCTGCAGGACAATTGCACCGCTTTAGA...AGTGCTCACACTCTGCTCCACTCGCTCAGTTCCACTGCACATGCAGGCAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR CAA 90 bp TCAGGGTTCTCAATGACGGCTGTGGAGAGCTGGGCCTCGGTCATGATGGCTAGGGCTGCGGTCATCAGCTaGAGAAGCTATGTATTTACC +
Preference number: 3 (lower is better)
Translates to: SGFSMTAVESWASVMMARAAVIS*RSYVFT
Trigger: GGTAAATACATAGCTTCTCAAGCTGATGACCGCAGC...CCTAGCCATCATGACCGAGGCCCAGCTCTCCACAGCCGTCATTGAGAACCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR CAA 90 bp TTCACGACAGTCACAGCTTTCCGGTGCCCAACAAAGTCCATGTTGGTCTTCCATGCAGTGGGGCCTGAGTaGTTCATGGCATGGGCAGAC +
Preference number: 3 (lower is better)
Translates to: FTTVTAFRCPTKSMLVFHAVGPE*FMAWAD
Trigger: GTCTGCCCATGCCATGAACAACTCAGGCCCCACTGC...ATGGAAGACCAACATGGACTTTGTTGGGCACCGGAAAGCTGTGACTGTCGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR TCA 72 bp CAAGTAGGGCTAGCAATGTCCTGCTCCATGTTCCTGTaGGCAAGAGCTCACAGGGACCCACCAGACTGTGTA +
Preference number: 3 (lower is better)
Translates to: QVGLAMSCSMFL*ARAHRDPPDCV
Trigger: TACACAGTCTGGTGGGTCCCTGTGAGCTCTTGCTCACAGGAACATGGAGCAGGACATTGCTAGCCCTACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR TCA 72 bp CAAAGTCCATGTTGGTCTTCCATCCCTCCCGTTCGATaGTCTGGGCAGTGGGGCCTGAGTTGTTCATGGCAT +
Preference number: 3 (lower is better)
Translates to: QSPCWSSIPPVR*SGQWGLSCSWH
Trigger: ATGCCATGAACAACTCAGGCCCCACTGCCCAGATCATCGAACGGGAGGGATGGAAGACCAACATGGACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR GCA 72 bp TGGCCTCCTGGAAGCTCTAAAGCGGTGCAATTGTCCTaGAGAACATCGCAGTGTCAGGGTATCCTGCATGCA +
Preference number: 3 (lower is better)
Translates to: WPPGSSKAVQLS*RTSQCQGILHA
Trigger: TGCATGCAGGATACCCTGACACTGCGATGTTCTGCAGGACAATTGCACCGCTTTAGAGCTTCCAGGAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR GCA 72 bp AAGTCGGTATTCAAACCCTTCGTTTACGAGGTACCGTaGGTAGACGAGGAGCCAATGGCGGTACTCGTGGCT +
Preference number: 3 (lower is better)
Translates to: KSVFKPFVYEVP*VDEEPMAVLVA
Trigger: AGCCACGAGTACCGCCATTGGCTCCTCGTCTACGCACGGTACCTCGTAAACGAAGGGTTTGAATACCGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CCA 72 bp GAGCAGAGTGTGAGCACTCACAATGCTCACCAAACCTaGGACGTGGCAGGCAGTTTCCCAAGGACTAGGAAA +
Preference number: 3 (lower is better)
Translates to: EQSVSTHNAHQT*DVAGSFPRTRK
Trigger: TTTCCTAGTCCTTGGGAAACTGCCTGCCACGTCCCAGGTTTGGTGAGCATTGTGAGTGCTCACACTCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR CAA 90 bp ACGTCACAGCTGCCCGCAGCAGTGAGGATCCGGCTGGTGAGTACCGTCTCCCACTGTCCGAGTCTCAACTaGTTTCTTCAAAAGATTCTT +
Preference number: 3 (lower is better)
Translates to: TSQLPAAVRIRLVSTVSHCPSLN*FLQKIL
Trigger: AAGAATCTTTTGAAGAAACAAGTTGAGACTCGGACA...GTGGGAGACGGTACTCACCAGCCGGATCCTCACTGCTGCGGGCAGCTGTGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR GCA 72 bp GCCATAATGCTTGGCCTCCTGGAAGCTCTAAAGCGGTaGAATTGTCCTGCAGAACATCGCAGTGTCAGGGTA +
Preference number: 3 (lower is better)
Translates to: AIMLGLLEALKR*NCPAEHRSVRV
Trigger: TACCCTGACACTGCGATGTTCTGCAGGACAATTGCACCGCTTTAGAGCTTCCAGGAGGCCAAGCATTATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR GCA 72 bp GGTAGCATTCATACTGTCTTTATTGACAGAATCGCCTaGAGGTCTGGCACTGGCAGCCACCACAGGCTCTGT +
Preference number: 3 (lower is better)
Translates to: GSIHTVFIDRIA*RSGTGSHHRLC
Trigger: ACAGAGCCTGTGGTGGCTGCCAGTGCCAGACCTGCAGGCGATTCTGTCAATAAAGACAGTATGAATGCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR TCA 72 bp CATTCACAGTGGCACAACTGTTTAGCTACCTCATTATaGCCCACCTGTGTGTCCACACAGGTCAGGGCTACC +
Preference number: 3 (lower is better)
Translates to: HSQWHNCLATSL*PTCVSTQVRAT
Trigger: GGTAGCCCTGACCTGTGTGGACACACAGGTGGGTCATAATGAGGTAGCTAAACAGTTGTGCCACTGTGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR TCA 72 bp AGCGTCCTCCACACCTTTAGGCTGCGGTCATCAGCTTaGGAAGCTATGTATTTACCAACAGGGTCCCATGTC +
Preference number: 3 (lower is better)
Translates to: SVLHTFRLRSSA*EAMYLPTGSHV
Trigger: GACATGGGACCCTGTTGGTAAATACATAGCTTCTCAAGCTGATGACCGCAGCCTAAAGGTGTGGAGGACGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR GCA 72 bp CCAACTGCCAGTCCAGCGTCCTCCACACCTTTAGGCTaGGGTCATCAGCTTGAGAAGCTATGTATTTACCAA +
Preference number: 3 (lower is better)
Translates to: PTASPASSTPLG*GHQLEKLCIYQ
Trigger: TTGGTAAATACATAGCTTCTCAAGCTGATGACCGCAGCCTAAAGGTGTGGAGGACGCTGGACTGGCAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR-3UTR CAA 90 bp TGGTACAGTCTACAGAACATACTCAGTTTCCCCAGTTACATCTGTACTCCTTTGGGCATGCCCTGGCTTTaGCTGCACTCTCCAGCTCTG +
Preference number: 3 (lower is better)
Translates to: WYSLQNILSFPSYICTPLGMPWL*LHSPAL
Trigger: CAGAGCTGGAGAGTGCAGCAAAAGCCAGGGCATGCC...CAAAGGAGTACAGATGTAACTGGGGAAACTGAGTATGTTCTGTAGACTGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR CAA 90 bp TGTCACTTCATTCTCCACCTCAATGTACATGGAAGGATCGGAGCTGACCTGGAGCACTCATCAAAAGGCTaGGTGATGCTGGTCTCCAAC +
Preference number: 3 (lower is better)
Translates to: CHFILHLNVHGRIGADLEHSSKG*VMLVSN
Trigger: GTTGGAGACCAGCATCACCAAGCCTTTTGATGAGTG...CTCCAGGTCAGCTCCGATCCTTCCATGTACATTGAGGTGGAGAATGAAGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR TCA 72 bp ACTTCATGTATAGCCCTGTGTAACCACCAGTCAGGCTaGCAGATGGTTTTCAACACCACAGGACTCCCTCGT +
Preference number: 3 (lower is better)
Translates to: TSCIALCNHQSG*QMVFNTTGLPR
Trigger: ACGAGGGAGTCCTGTGGTGTTGAAAACCATCTGTCAGCCTGACTGGTGGTTACACAGGGCTATACATGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
3UTR GCA 72 bp TTTGGGTTGAATTTCACGACAGTCACAGCTTTCCGGTaGCCAACAAAGTCCATGTTGGTCTTCCATCCCTCC +
Preference number: 3 (lower is better)
Translates to: FGLNFTTVTAFR*PTKSMLVFHPS
Trigger: GGAGGGATGGAAGACCAACATGGACTTTGTTGGGCACCGGAAAGCTGTGACTGTCGTGAAATTCAACCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR TCA 72 bp TGTCTCTACCTCAAGCTCAAGTTTTCGCTTGGACAGTaGGGAAGCCTTAGCCAAAGGGACTTTCTCATCGCT +
Preference number: 3 (lower is better)
Translates to: CLYLKLKFSLGQ*GSLSQRDFLIA
Trigger: AGCGATGAGAAAGTCCCTTTGGCTAAGGCTTCCTCACTGTCCAAGCGAAAACTTGAGCTTGAGGTAGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR GCA 72 bp CTACAGAGGCAGGACTTAATGCTTCCTAACAGAGCATaGAGCCGCACAATGCATACCTTGCTAAACAAGCAG +
Preference number: 3 (lower is better)
Translates to: LQRQDLMLPNRA*SRTMHTLLNKQ
Trigger: CTGCTTGTTTAGCAAGGTATGCATTGTGCGGCTGCATGCTCTGTTAGGAAGCATTAAGTCCTGCCTCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR CCA 72 bp TGGAAATGCTCATTATTAAACCAGCCACAGCCATGCTaGAGGCACCCTGGTTGCCTTAGACACATCAGTACT +
Preference number: 3 (lower is better)
Translates to: WKCSLLNQPQPC*RHPGCLRHIST
Trigger: AGTACTGATGTGTCTAAGGCAACCAGGGTGCCTCCAGCATGGCTGTGGCTGGTTTAATAATGAGCATTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR TCA 72 bp ACAGGGTCCCATGTCAACCCTTTGACCAAGCCAGAATaGCCTCTCAGAGTAGCTAGAATTTCTGGGAACTTT +
Preference number: 3 (lower is better)
Translates to: TGSHVNPLTKPE*PLRVARISGNF
Trigger: AAAGTTCCCAGAAATTCTAGCTACTCTGAGAGGTCATTCTGGCTTGGTCAAAGGGTTGACATGGGACCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR GCA 72 bp TGCTATGCAGAGAGGCGTGATTCTTCTCCGGCCATCTaGTGTCCGAGTCTCAACTTGTTTCTTCAAAAGATT +
Preference number: 3 (lower is better)
Translates to: CYAERRDSSPAI*CPSLNLFLQKI
Trigger: AATCTTTTGAAGAAACAAGTTGAGACTCGGACAGCAGATGGCCGGAGAAGAATCACGCCTCTCTGCATAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR GCA 72 bp TTCCAGTGGAGTAGTGAACCGGACCCAGTAAGTCCTTaGATATTTCTCGAAGTCGGTATTCAAACCCTTCGT +
Preference number: 3 (lower is better)
Translates to: FQWSSEPDPVSP*IFLEVGIQTLR
Trigger: ACGAAGGGTTTGAATACCGACTTCGAGAAATATGCAAGGACTTACTGGGTCCGGTTCACTACTCCACTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CCA 72 bp CTGTGGTCTTATAAGCCTCAAACCCTGTCCAACATGTaGACACTCAGATGTTGTGAAGCAATTGACATAGAA +
Preference number: 3 (lower is better)
Translates to: LWSYKPQTLSNM*TLRCCEAIDIE
Trigger: TTCTATGTCAATTGCTTCACAACATCTGAGTGTCCACATGTTGGACAGGGTTTGAGGCTTATAAGACCACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR-3UTR CAA 90 bp CAGCACAGCATCAGGACGCAGAAATTGACATTGGTACAGTCTACAGAACATACTTTAATTCCATATGTCTaGGACTTGGATTTCTTCAGC +
Preference number: 3 (lower is better)
Translates to: QHSIRTQKLTLVQSTEHTLIPYV*DLDFFS
Trigger: GCTGAAGAAATCCAAGTCCAAGACATATGGAATTAA...AGTATGTTCTGTAGACTGTACCAATGTCAATTTCTGCGTCCTGATGCTGTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR TCA 72 bp GAGTTTCATCTGAGTTGCTGTGTGTACAGCAGTTACTaGAAATGGCACTATATCACATACAGTACGGATACA +
Preference number: 3 (lower is better)
Translates to: EFHLSCCVYSSY*KWHYITYSTDT
Trigger: TGTATCCGTACTGTATGTGATATAGTGCCATTTTCAGTAACTGCTGTACACACAGCAACTCAGATGAAACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
3UTR TCA 72 bp TTAATTCCATATGTCTTGGACTTGGATTTCTTCAGCTaGGTCCACAAACCCTCTTTATGCAAGGTTGTGTGT +
Preference number: 3 (lower is better)
Translates to: LIPYVLDLDFFS*VHKPSLCKVVC
Trigger: ACACACAACCTTGCATAAAGAGGGTTTGTGGACTCAGCTGAAGAAATCCAAGTCCAAGACATATGGAATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR TCA 72 bp TTCAAGATTGGCTGTTTTTGCTCTGAAGAATTTCCTTaGGTTTCATCTGAGTTGCTGTGTGTACAGCAGTTA +
Preference number: 3 (lower is better)
Translates to: FKIGCFCSEEFP*VSSELLCVQQL
Trigger: TAACTGCTGTACACACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGCCAATCTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
3UTR-3UTR CAA 90 bp TCCTGCTACATGTATGTTTTCAAGATTGGCTGTTTTTGCTCTGAAGAATTTCCTTGTATGTTTTCAAGATaGGCTGTTTTTGCTCTGAAG +
Preference number: 3 (lower is better)
Translates to: SCYMYVFKIGCFCSEEFPCMFSR*AVFALK
Trigger: CTTCAGAGCAAAAACAGCCAATCTTGAAAACATACA...AGGAAATTCTTCAGAGCAAAAACAGCCAATCTTGAAAACATACATGTAGCAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
3UTR TCA 72 bp TGTCTGTCTTTTACCCAAACTACAACAGAAACTCTTTaGAGACAACTTGTCTGTTTCAAAACTGTGGTCTTA +
Preference number: 3 (lower is better)
Translates to: CLSFTQTTTETL*RQLVCFKTVVL
Trigger: TAAGACCACAGTTTTGAAACAGACAAGTTGTCTTCAAAGAGTTTCTGTTGTAGTTTGGGTAAAAGACAGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR TCA 90 bp GCACGGAGAAGAGCCGGGCAGCCTGCCTTCCCGAGTTGGAGGTGCGGCCCTGGAATCCCTCCCGTTCGATaGTCTGGGCAGTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: ARRRAGQPAFPSWRCGPGIPPVR*SGQWGL
Trigger: CAGGCCCCACTGCCCAGATCATCGAACGGGAGGGAT...TCCAGGGCCGCACCTCCAACTCGGGAAGGCAGGCTGCCCGGCTCTTCTCCGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR TCA 90 bp GCAGCAGTGAGGATCCGGCTGGTGAGTACCGTCTCCCACTCCTTCCCTTCCCGGCTGGGCAGTGGGGCCTaGGTTGTTCATGGCATGGGC +
Preference number: 4 (lower is better)
Translates to: AAVRIRLVSTVSHSFPSRLGSGA*VVHGMG
Trigger: GCCCATGCCATGAACAACTCAGGCCCCACTGCCCAG...CCGGGAAGGGAAGGAGTGGGAGACGGTACTCACCAGCCGGATCCTCACTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR TCA 90 bp ACCACTGGAGCCGAACACGGTGCTGGGGCCGATGTACGTAGCCCGCTTCCACACCATCAGGTGACCAGCTaGGCCGCAACACATGGGTCG +
Preference number: 4 (lower is better)
Translates to: TTGAEHGAGADVRSPLPHHQVTS*AATHGS
Trigger: CGACCCATGTGTTGCGGCTCAGCTGGTCACCTGATG...GTGTGGAAGCGGGCTACGTACATCGGCCCCAGCACCGTGTTCGGCTCCAGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR TCA 90 bp CACACCACGTCACAGCTGCCCGCAGCAGTGAGGATCCGGCTGGTGAGTACCGTCTCTTGCTGCACCACATaGGGCACGGAGAAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: HTTSQLPAAVRIRLVSTVSCCTT*GTEKSR
Trigger: CCGGCTCTTCTCCGTGCCTCATGTGGTGCAGCAAGA...GACGGTACTCACCAGCCGGATCCTCACTGCTGCGGGCAGCTGTGACGTGGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp ACGGAGAAGAGCCGGGCAGCCTGCCTTCCCGAGTTGGAGGTGCGGCCCTGGATTGACGGCGACCACAGGTaGAGAACACTGACAGCATCC +
Preference number: 4 (lower is better)
Translates to: TEKSRAACLPELEVRPWIDGDHR*RTLTAS
Trigger: GGATGCTGTCAGTGTTCTCCACCTGTGGTCGCCGTC...AATCCAGGGCCGCACCTCCAACTCGGGAAGGCAGGCTGCCCGGCTCTTCTCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR TCA 90 bp GTGCCCGCCAGGGAGCCCGAGAGGGGGATGCTGTTAAAGAATGCCGTGGAGAAGGCTGGGCCTCGGTCATaGTGGCTAGGCTCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: VPAREPERGMLLKNAVEKAGPRS*WLGSCH
Trigger: ATGGCAAGAGCCTAGCCATCATGACCGAGGCCCAGC...CTTCTCCACGGCATTCTTTAACAGCATCCCCCTCTCGGGCTCCCTGGCGGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp GGTCGCAGCACTCTTCTGGTCCAGCTGCTGCTGCTGCTGCCTTCGCTGGTACTTGGTGTAGGAAGTGCCTaGCGCTGCGGCAGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: GRSTLLVQLLLLLPSLVLGVGSA*RCGRAS
Trigger: GGAAGCTCTGCCGCAGCGCCAGGCACTTCCTACACC...AAGTACCAGCGAAGGCAGCAGCAGCAGCAGCTGGACCAGAAGAGTGCTGCGACC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp ATGGTGCCCGCCAGGGAGCCCGAGAGGGGGATGCTGTTAAAGAATGCCGTGGAGGTCGCAGCACTCTTCTaGTCCAGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: MVPAREPERGMLLKNAVEVAALF*SSCCCC
Trigger: GCAGCAGCAGCAGCTGGACCAGAAGAGTGCTGCGAC...CTCCACGGCATTCTTTAACAGCATCCCCCTCTCGGGCTCCCTGGCGGGCACCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp TCAGGGTTCTCAATGACGGCTGTGGAGAGCTGGGCCTCGGTCATGATGGCTAGGCGCCTGCGACTGAGGTaGCTGAGCCCATCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: SGFSMTAVESWASVMMARRLRLR*LSPSPW
Trigger: CCAGGGAGATGGGCTCAGCCACCTCAGTCGCAGGCG...CCTAGCCATCATGACCGAGGCCCAGCTCTCCACAGCCGTCATTGAGAACCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp CTGCACCACATGAGGCACGGAGAAGAGCCGGGCAGCCTGCCTTCCCGAGTTGGAGGATCGGAGCTGACCTaGAGGGTGAATGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LHHMRHGEEPGSLPSRVGGSELT*RVNALW
Trigger: CCAGAGAGCATTCACCCTCCAGGTCAGCTCCGATCC...TCCAACTCGGGAAGGCAGGCTGCCCGGCTCTTCTCCGTGCCTCATGTGGTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR TCA 90 bp ACCACTGGAGCCGAACACGGTGCTGGGGCCGATGTACGTAGCCCGCTTCCACACCTTTGGACCGCTCTGTaGACCGGGAGTCAAACGCTT +
Preference number: 4 (lower is better)
Translates to: TTGAEHGAGADVRSPLPHLWTAL*TGSQTL
Trigger: AAGCGTTTGACTCCCGGTTCACAGAGCGGTCCAAAG...GTGTGGAAGCGGGCTACGTACATCGGCCCCAGCACCGTGTTCGGCTCCAGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp GCAGCAGTGAGGATCCGGCTGGTGAGTACCGTCTCCCACTCCTTCCCTTCCCGGGCCACTGCTCCACATTaGCAAGCTTACCACTGGAGC +
Preference number: 4 (lower is better)
Translates to: AAVRIRLVSTVSHSFPSRATAPH*QAYHWS
Trigger: GCTCCAGTGGTAAGCTTGCCAATGTGGAGCAGTGGC...CCGGGAAGGGAAGGAGTGGGAGACGGTACTCACCAGCCGGATCCTCACTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp GTCGGAGTCATGCTGGTCAGGGCAGGAGCACCTGGTGTGGCTTTGGACCGCTCTGCTAGCCAGGCATCGTaGGGAGACCATGCTACATCC +
Preference number: 4 (lower is better)
Translates to: VGVMLVRAGAPGVALDRSASQAS*GDHATS
Trigger: GGATGTAGCATGGTCTCCCCACGATGCCTGGCTAGC...AGAGCGGTCCAAAGCCACACCAGGTGCTCCTGCCCTGACCAGCATGACTCCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp ACCGCCACTGCTCCACATTGGCAAGCTTACCACTGGAGCCGAACACGGTGCTGGACGGCTGTGGAGAGCTaGGCCTCGGTCATGATGGCT +
Preference number: 4 (lower is better)
Translates to: TATAPHWQAYHWSRTRCWTAVES*ASVMMA
Trigger: AGCCATCATGACCGAGGCCCAGCTCTCCACAGCCGT...CCAGCACCGTGTTCGGCTCCAGTGGTAAGCTTGCCAATGTGGAGCAGTGGCGGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp GTGAGGATCCGGCTGGTGAGTACCGTCTCCCACTCCTTCCCTTCCCGGTTGCACCTGAGCCCATCTCCCTaGTCGCAGCACTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: VRIRLVSTVSHSFPSRLHLSPSP*SQHSSG
Trigger: ACCAGAAGAGTGCTGCGACCAGGGAGATGGGCTCAG...GTGCAACCGGGAAGGGAAGGAGTGGGAGACGGTACTCACCAGCCGGATCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp ACCACAGGCTCTGTGCAAGGCTTCGAGGCGCCGAAGGAGTTAGGGGTACTGGAGCACAGCATGGCGTCCTaGGATGGCAGGCTGCTCCTA +
Preference number: 4 (lower is better)
Translates to: TTGSVQGFEAPKELGVLEHSMAS*DGRLLL
Trigger: TAGGAGCAGCCTGCCATCCCAGGACGCCATGCTGTG...CTCCAGTACCCCTAACTCCTTCGGCGCCTCGAAGCCTTGCACAGAGCCTGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp CACACCACGTCACAGCTGCCCGCAGCAGTGAGGATCCGGCTGGTGAGTACCGTCCTAGGTAGGCCAGGGTaGTCTCTTGCTGCACCACAT +
Preference number: 4 (lower is better)
Translates to: HTTSQLPAAVRIRLVSTVLGRPG*SLAAPH
Trigger: ATGTGGTGCAGCAAGAGACCACCCTGGCCTACCTAG...GACGGTACTCACCAGCCGGATCCTCACTGCTGCGGGCAGCTGTGACGTGGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR GCA 90 bp CATTTCTTAAAAACCAGAGTCTCCAGGGGCCGACCTGGGAGCCTAAGAAGTGAAGCGGCTGCCAGCCGCTaGCGTCCGCCATGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: HFLKTRVSRGRPGSLRSEAAASR*RPPCLG
Trigger: GCCCAGACATGGCGGACGGCAGCGGCTGGCAGCCGC...TTCACTTCTTAGGCTCCCAGGTCGGCCCCTGGAGACTCTGGTTTTTAAGAAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR GCA 90 bp ACACCTGCCTGCATGTGCAGTGGAACTGAGCGAGTGGAGCAGAGTGTGAGCACTCCAGCAAGCCCTACCTaGTCGGCACACCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: TPACMCSGTERVEQSVSTPASPT*SAHLPA
Trigger: TGCAGGCAGGTGTGCCGAGCAGGTAGGGCTTGCTGG...AGTGCTCACACTCTGCTCCACTCGCTCAGTTCCACTGCACATGCAGGCAGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp ACACCTGCCTGCATGTGCAGTGGAACTGAGCGAGTGGAGCAGAGTGTGAGCACTGGTGTAGGAAGTGCCTaGCGCTGCGGCAGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: TPACMCSGTERVEQSVSTGVGSA*RCGRAS
Trigger: GGAAGCTCTGCCGCAGCGCCAGGCACTTCCTACACC...AGTGCTCACACTCTGCTCCACTCGCTCAGTTCCACTGCACATGCAGGCAGGTGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp TTACGAGGTACCGTGCGTAGACGAGGAGCCAATGGCGGTACTCGTGGCTGGACTAATCGCCTGCAGGTCTaGCACTGGCAGCCACCACAG +
Preference number: 4 (lower is better)
Translates to: LRGTVRRRGANGGTRGWTNRLQV*HWQPPQ
Trigger: CTGTGGTGGCTGCCAGTGCCAGACCTGCAGGCGATT...AGTCCAGCCACGAGTACCGCCATTGGCTCCTCGTCTACGCACGGTACCTCGTAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CAA 72 bp GTCATGCTGGTCAGGGCAGGAGCACCTGGTGTGGCTTaGGACCGCTCTGTGAACCGGGAGTCAAACGCTTTC +
Preference number: 4 (lower is better)
Translates to: VMLVRAGAPGVA*DRSVNRESNAF
Trigger: GAAAGCGTTTGACTCCCGGTTCACAGAGCGGTCCAAAGCCACACCAGGTGCTCCTGCCCTGACCAGCATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR TCA 90 bp CTGCACCACATGAGGCACGGAGAAGAGCCGGGCAGCCTGCCTTCCCGAGTTGGAATACATCCCACTGTTTaGCCACCGCACACAGTTCAC +
Preference number: 4 (lower is better)
Translates to: LHHMRHGEEPGSLPSRVGIHPTV*PPHTVH
Trigger: GTGAACTGTGTGCGGTGGTCAAACAGTGGGATGTAT...TCCAACTCGGGAAGGCAGGCTGCCCGGCTCTTCTCCGTGCCTCATGTGGTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR TCA 90 bp GATGACCACCAGCGGCCGTTTCAGACATGTGAGCCAGACAGAAAGCGAGCGGTCGTAATGCCCATCAGGTaGCCAGCTGAGCCGCAACAC +
Preference number: 4 (lower is better)
Translates to: DDHQRPFQTCEPDRKRAVVMPIR*PAEPQH
Trigger: GTGTTGCGGCTCAGCTGGTCACCTGATGGGCATTAC...GACCGCTCGCTTTCTGTCTGGCTCACATGTCTGAAACGGCCGCTGGTGGTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR TCA 90 bp AGCACTCTTCTGGTCCAGCTGCTGCTGCTGCTGCCTTCGCTGGTACTTGAGCATCAAGACTCTCCCCGTTaGCAACGCCTGCGACTGAGG +
Preference number: 4 (lower is better)
Translates to: STLLVQLLLLLPSLVLEHQDSPR*QRLRLR
Trigger: CCTCAGTCGCAGGCGTTGTCAACGGGGAGAGTCTTG...ATGCTCAAGTACCAGCGAAGGCAGCAGCAGCAGCAGCTGGACCAGAAGAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR TCA 90 bp CTGCACCACATGAGGCACGGAGAAGAGCCGGGCAGCCTGCCTTCCCGAGTTGGATTTTCGCTTGGACAGTaGGGAAGCCTTAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LHHMRHGEEPGSLPSRVGFSLGQ*GSLSQR
Trigger: CCTTTGGCTAAGGCTTCCTCACTGTCCAAGCGAAAA...TCCAACTCGGGAAGGCAGGCTGCCCGGCTCTTCTCCGTGCCTCATGTGGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR GCA 90 bp GCTTGGCCTCCTGGAAGCTCTAAAGCGGTGCAATTGTCCTGCAGAACATCGCAGAGAGAGCAGGGAGGGTaGTGGGCACAGACCCAGCCT +
Preference number: 4 (lower is better)
Translates to: AWPPGSSKAVQLSCRTSQREQGG*WAQTQP
Trigger: AGGCTGGGTCTGTGCCCAGCACCCTCCCTGCTCTCT...CTGCGATGTTCTGCAGGACAATTGCACCGCTTTAGAGCTTCCAGGAGGCCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp GCGCCGAAGGAGTTAGGGGTACTGGAGTCCAGTGGCAGTAGCTGTGGACTGCTACAATGGCGGTACTCGTaGCTGGACTGCAGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: APKELGVLESSGSSCGLLQWRYS*LDCRVS
Trigger: ACTCACCCTGCAGTCCAGCCACGAGTACCGCCATTG...TAGCAGTCCACAGCTACTGCCACTGGACTCCAGTACCCCTAACTCCTTCGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR TCA 90 bp ACCACAGGCTCTGTGCAAGGCTTCGAGGCGCCGAAGGAGTTAGGGGTACTGGAGGCCTTCGCTGGTACTTaGGCATCTCAGGGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: TTGSVQGFEAPKELGVLEAFAGT*ASQGSQ
Trigger: TTGAGAACCCTGAGATGCTCAAGTACCAGCGAAGGC...CTCCAGTACCCCTAACTCCTTCGGCGCCTCGAAGCCTTGCACAGAGCCTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR TCA 90 bp GCGCCGAAGGAGTTAGGGGTACTGGAGTCCAGTGGCAGTAGCTGTGGACTGCTAAGCTGTGGACTGCTATaGGAAGAGAGCATGGTGCCC +
Preference number: 4 (lower is better)
Translates to: APKELGVLESSGSSCGLLSCGLL*EESMVP
Trigger: GGGCACCATGCTCTCTTCTCATAGCAGTCCACAGCT...TAGCAGTCCACAGCTACTGCCACTGGACTCCAGTACCCCTAACTCCTTCGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR GCA 90 bp CTTCTTTCACCACAACCACCTGTCTGTGAACATCCCAGACAGAGAGTGTGGCTGGGAAGTGCCTGGCGCTaGGGCAGAGCTTCCACTCGG +
Preference number: 4 (lower is better)
Translates to: LLSPQPPVCEHPRQRVWLGSAWR*GRASTR
Trigger: CCGAGTGGAAGCTCTGCCGCAGCGCCAGGCACTTCC...CAGCCACACTCTCTGTCTGGGATGTTCACAGACAGGTGGTTGTGGTGAAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR GCA 90 bp AGGAGGTTGCATAGGAGGTTGTCTAGGGAGGTCCTGGGTACCCTTGCCCCAGCCGCTCACTGCAACCTCTaGCTCTGGGGTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: RRLHRRLSREVLGTLAPAAHCNL*LWGSSN
Trigger: ATTGCTTGAACCCCAGAGGCAGAGGTTGCAGTGAGC...GGCTGGGGCAAGGGTACCCAGGACCTCCCTAGACAACCTCCTATGCAACCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp GTGCCCGCCAGGGAGCCCGAGAGGGGGATGCTGTTAAAGAATGCCGTGGAGAAGCTCCAGTTGCGAACTTaGTCCCGTCAGGGTGAATAT +
Preference number: 4 (lower is better)
Translates to: VPAREPERGMLLKNAVEKLQLRT*SRQGEY
Trigger: ATATTCACCCTGACGGGACCAAGTTCGCAACTGGAG...CTTCTCCACGGCATTCTTTAACAGCATCCCCCTCTCGGGCTCCCTGGCGGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp AGCACTCTTCTGGTCCAGCTGCTGCTGCTGCTGCCTTCGCTGGTACTTGAGCATTCCCGTTCGATGATCTaGGCAGTGGGGCCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: STLLVQLLLLLPSLVLEHSRSMI*AVGPEL
Trigger: CAACTCAGGCCCCACTGCCCAGATCATCGAACGGGA...ATGCTCAAGTACCAGCGAAGGCAGCAGCAGCAGCAGCTGGACCAGAAGAGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp CTGCACCACATGAGGCACGGAGAAGAGCCGGGCAGCCTGCCTTCCCGAGTTGGACAACAAAGTCCATGTTaGTCTTCCATCCCTCCCGTT +
Preference number: 4 (lower is better)
Translates to: LHHMRHGEEPGSLPSRVGQQSPC*SSIPPV
Trigger: AACGGGAGGGATGGAAGACCAACATGGACTTTGTTG...TCCAACTCGGGAAGGCAGGCTGCCCGGCTCTTCTCCGTGCCTCATGTGGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp TCAGGGTTCTCAATGACGGCTGTGGAGAGCTGGGCCTCGGTCATGATGGCTAGGGGCTCTTGCCATAGGTaGACTGGTGAATGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: SGFSMTAVESWASVMMARGSCHR*TGECGS
Trigger: AGAGCCGCATTCACCAGTCCACCTATGGCAAGAGCC...CCTAGCCATCATGACCGAGGCCCAGCTCTCCACAGCCGTCATTGAGAACCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp GTGCCCGCCAGGGAGCCCGAGAGGGGGATGCTGTTAAAGAATGCCGTGGAGAAGAGTCAAACGCTTTCATaGGTTCGATCTTGGACGGGG +
Preference number: 4 (lower is better)
Translates to: VPAREPERGMLLKNAVEKSQTLS*VRSWTG
Trigger: CCCCGTCCAAGATCGAACCCATGAAAGCGTTTGACT...CTTCTCCACGGCATTCTTTAACAGCATCCCCCTCTCGGGCTCCCTGGCGGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CAA 72 bp TGGTCCAGCTGCTGCTGCTGCTGCCTTCGCTGGTACTaGAGCATCTCAGGGTTCTCAATGACGGCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: WSSCCCCCLRWY*SISGFSMTAVE
Trigger: CTCCACAGCCGTCATTGAGAACCCTGAGATGCTCAAGTACCAGCGAAGGCAGCAGCAGCAGCAGCTGGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR TCA 90 bp TGCTCGGCACACCTGCCTGCATGTGCAGTGGAACTGAGCGAGTGGAGCAGAGTGAACCACCAGTCAGGCTaGCAGATGGTTTTCAACACC +
Preference number: 4 (lower is better)
Translates to: CSAHLPACAVELSEWSRVNHQSG*QMVFNT
Trigger: GGTGTTGAAAACCATCTGTCAGCCTGACTGGTGGTT...CACTCTGCTCCACTCGCTCAGTTCCACTGCACATGCAGGCAGGTGTGCCGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR TCA 90 bp ATGGTGCCCGCCAGGGAGCCCGAGAGGGGGATGCTGTTAAAGAATGCCGTGGAGTTACAGCATTCCAGATaGCGACAGTGTTATCCACGC +
Preference number: 4 (lower is better)
Translates to: MVPAREPERGMLLKNAVELQHSR*RQCYPR
Trigger: GCGTGGATAACACTGTCGTCATCTGGAATGCTGTAA...CTCCACGGCATTCTTTAACAGCATCCCCCTCTCGGGCTCCCTGGCGGGCACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR TCA 90 bp GTGAGGATCCGGCTGGTGAGTACCGTCTCCCACTCCTTCCCTTCCCGGTTGCACTTGACCAAGCCAGAATaGCCTCTCAGAGTAGCTAGA +
Preference number: 4 (lower is better)
Translates to: VRIRLVSTVSHSFPSRLHLTKPE*PLRVAR
Trigger: TCTAGCTACTCTGAGAGGTCATTCTGGCTTGGTCAA...GTGCAACCGGGAAGGGAAGGAGTGGGAGACGGTACTCACCAGCCGGATCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR TCA 90 bp TGGCTAGGCTCTTGCCATAGGTGGACTGGTGAATGCGGCTCTTCTCCTCCTCGCCCCATGTCAACCCTTTaGCCAAGCCAGAATGACCTC +
Preference number: 4 (lower is better)
Translates to: WLGSCHRWTGECGSSPPRPMSTL*PSQNDL
Trigger: GAGGTCATTCTGGCTTGGTCAAAGGGTTGACATGGG...GCGAGGAGGAGAAGAGCCGCATTCACCAGTCCACCTATGGCAAGAGCCTAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR GCA 90 bp ACACCTGCCTGCATGTGCAGTGGAACTGAGCGAGTGGAGCAGAGTGTGAGCACTGGCCAATGGCAGGGATaGTTGTCACTCGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: TPACMCSGTERVEQSVSTGQWQG*LSLVLL
Trigger: GAGAAGGACGAGTGACAAGCATCCCTGCCATTGGCC...AGTGCTCACACTCTGCTCCACTCGCTCAGTTCCACTGCACATGCAGGCAGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp TTACGAGGTACCGTGCGTAGACGAGGAGCCAATGGCGGTACTCGTGGCTGGACTCTTCAGTGCAAGTGCTaGTGCAGACAGACACATGGC +
Preference number: 4 (lower is better)
Translates to: LRGTVRRRGANGGTRGWTLQCKC*CRQTHG
Trigger: GCCATGTGTCTGTCTGCACCAGCACTTGCACTGAAG...AGTCCAGCCACGAGTACCGCCATTGGCTCCTCGTCTACGCACGGTACCTCGTAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR TCA 90 bp AGTCTGCACACTGAGCCAGTGAGTCCTGCTTGTCAGAAACCAGGTTCCTGCCAGCTATGCAGAGAGGCGTaGTTCTTCTCCGGCCATCTG +
Preference number: 4 (lower is better)
Translates to: SLHTEPVSPACQKPGSCQLCREA*FFSGHL
Trigger: CAGATGGCCGGAGAAGAATCACGCCTCTCTGCATAG...CTGGCAGGAACCTGGTTTCTGACAAGCAGGACTCACTGGCTCAGTGTGCAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR TCA 90 bp AGCACTCTTCTGGTCCAGCTGCTGCTGCTGCTGCCTTCGCTGGTACTTGAGCATCTAAAGTCTGCACACTaGGCCAGTGAGTCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: STLLVQLLLLLPSLVLEHLKSAH*ASESCL
Trigger: CAAGCAGGACTCACTGGCTCAGTGTGCAGACTTTAG...ATGCTCAAGTACCAGCGAAGGCAGCAGCAGCAGCAGCTGGACCAGAAGAGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR GCA 90 bp GTGAAGGAGGAGGCAAAACATGATAGTCACACTACAGAGGCAGGACTTAATGCTGGCAGGGAGCGTGGCTaGACTGAGGGGAAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: VKEEAKHDSHTTEAGLNAGRERG*TEGKPL
Trigger: GAGGGGCTTCCCCTCAGTGCAGCCACGCTCCCTGCC...AGCATTAAGTCCTGCCTCTGTAGTGTGACTATCATGTTTTGCCTCCTCCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp GCTTGGCCTCCTGGAAGCTCTAAAGCGGTGCAATTGTCCTGCAGAACATCGCAGACCAAACCTGGGACGTaGCAGGCAGTTTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: AWPPGSSKAVQLSCRTSQTKPGT*QAVSQG
Trigger: TCCTTGGGAAACTGCCTGCCACGTCCCAGGTTTGGT...CTGCGATGTTCTGCAGGACAATTGCACCGCTTTAGAGCTTCCAGGAGGCCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp TGCAATTGTCCTGCAGAACATCGCAGTGTCAGGGTATCCTGCATGCAGGTGAGGAGAAGTGAAGCCTGCTaGTGCAGAGGGGCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: CNCPAEHRSVRVSCMQVRRSEAC*CRGASK
Trigger: CTTGCTGGCCCCTCTGCACCAGCAGGCTTCACTTCT...CCTCACCTGCATGCAGGATACCCTGACACTGCGATGTTCTGCAGGACAATTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp CACAGAGCCGTCCATAGAGCATACCAAGATGCCCAGCCCATTCAGAGTCCAGGACTGAGCCGCAACACATaGGTCGTTCCTCCACACTCA +
Preference number: 4 (lower is better)
Translates to: HRAVHRAYQDAQPIQSPGLSRNT*VVPPHS
Trigger: TGAGTGTGGAGGAACGACCCATGTGTTGCGGCTCAG...TCCTGGACTCTGAATGGGCTGGGCATCTTGGTATGCTCTATGGACGGCTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp TCAGGGTTCTCAATGACGGCTGTGGAGAGCTGGGCCTCGGTCATGATGGCTAGGTTGTCAAACAGTTCATaGATGACCACCAGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: SGFSMTAVESWASVMMARLSNSS*MTTSGR
Trigger: ACGGCCGCTGGTGGTCATCCATGAACTGTTTGACAA...CCTAGCCATCATGACCGAGGCCCAGCTCTCCACAGCCGTCATTGAGAACCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp GGTCGCAGCACTCTTCTGGTCCAGCTGCTGCTGCTGCTGCCTTCGCTGGTACTTAGGTTCCTGCCAGGATaGAGTGTAGAGACTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GRSTLLVQLLLLLPSLVLRFLPG*SVETLL
Trigger: AAGAAGAGTCTCTACACTCCATCCTGGCAGGAACCT...AAGTACCAGCGAAGGCAGCAGCAGCAGCAGCTGGACCAGAAGAGTGCTGCGACC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CAA 72 bp CTTCCTAACAGAGCATGCAGCCGCACAATGCATACCTaGCTAAACAAGCAGGTGGCAGGGAGCGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LPNRACSRTMHT*LNKQVAGSVAA
Trigger: TGCAGCCACGCTCCCTGCCACCTGCTTGTTTAGCAAGGTATGCATTGTGCGGCTGCATGCTCTGTTAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR TCA 90 bp TCAGGGTTCTCAATGACGGCTGTGGAGAGCTGGGCCTCGGTCATGATGGCTAGGATCCATCACATCGCCTaGATGATTCCGGAGGATAGA +
Preference number: 4 (lower is better)
Translates to: SGFSMTAVESWASVMMARIHHIA*MIPEDR
Trigger: TCTATCCTCCGGAATCATTCAGGCGATGTGATGGAT...CCTAGCCATCATGACCGAGGCCCAGCTCTCCACAGCCGTCATTGAGAACCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR TCA 90 bp CTGCACCACATGAGGCACGGAGAAGAGCCGGGCAGCCTGCCTTCCCGAGTTGGATCAAAAGATTCTTCCTaGTATCTTCAAGACTCTCCC +
Preference number: 4 (lower is better)
Translates to: LHHMRHGEEPGSLPSRVGSKDSS*YLQDSP
Trigger: GGGAGAGTCTTGAAGATATCAGGAAGAATCTTTTGA...TCCAACTCGGGAAGGCAGGCTGCCCGGCTCTTCTCCGTGCCTCATGTGGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR GCA 90 bp ACCTGCCATAATGCTTGGCCTCCTGGAAGCTCTAAAGCGGTGCAATTGTCCTGCGGGGTCTTGTTACGTTaGCCAGGCTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: TCHNAWPPGSSKAVQLSCGVLLR*PGWSRT
Trigger: AGTTCGAGACCAGCCTGGGCAACGTAACAAGACCCC...GCAGGACAATTGCACCGCTTTAGAGCTTCCAGGAGGCCAAGCATTATGGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp ACAAATGCAGGAACATCCTGTCCAGAGAGATTATCTGTTGATGTGGAACTTGAGCCCAGTCGCGGCAGCTaGCCAGGTCGCGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: TNAGTSCPERLSVDVELEPSRGS*PGRAAT
Trigger: AGTGGCAGCGCGACCTGGCCAGCTGCCGCGACTGGG...CTCAAGTTCCACATCAACAGATAATCTCTCTGGACAGGATGTTCCTGCATTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp CATTTCTTAAAAACCAGAGTCTCCAGGGGCCGACCTGGGAGCCTAAGAAGTGAACCAGACTGTGTAGGCTaGTCACAGTCCCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: HFLKTRVSRGRPGSLRSEPDCVG*SQSPGL
Trigger: CAGCCCTGGGGACTGTGACCAGCCTACACAGTCTGG...TTCACTTCTTAGGCTCCCAGGTCGGCCCCTGGAGACTCTGGTTTTTAAGAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp CATTTCTTAAAAACCAGAGTCTCCAGGGGCCGACCTGGGAGCCTAAGAAGTGAACAGCCACAGCCATGCTaGAGGCACCCTGGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: HFLKTRVSRGRPGSLRSEQPQPC*RHPGCL
Trigger: AAGGCAACCAGGGTGCCTCCAGCATGGCTGTGGCTG...TTCACTTCTTAGGCTCCCAGGTCGGCCCCTGGAGACTCTGGTTTTTAAGAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp CATTTCTTAAAAACCAGAGTCTCCAGGGGCCGACCTGGGAGCCTAAGAAGTGAACATGGACTGGGGTGCTaGCTGGCATGCCCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: HFLKTRVSRGRPGSLRSEHGLGC*LACPGF
Trigger: AAAGCCAGGGCATGCCAGCCAGCACCCCAGTCCATG...TTCACTTCTTAGGCTCCCAGGTCGGCCCCTGGAGACTCTGGTTTTTAAGAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp GCTTGGCCTCCTGGAAGCTCTAAAGCGGTGCAATTGTCCTGCAGAACATCGCAGCAGGTTGAAGTGCAGTaGGGCACAATCATGGCTCAC +
Preference number: 4 (lower is better)
Translates to: AWPPGSSKAVQLSCRTSQQVEVQ*GTIMAH
Trigger: GTGAGCCATGATTGTGCCCCACTGCACTTCAACCTG...CTGCGATGTTCTGCAGGACAATTGCACCGCTTTAGAGCTTCCAGGAGGCCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp TGTCACTTCATTCTCCACCTCAATGTACATGGAAGGATCGGAGCTGACCTGGAGCCTGCCTTCCCGAGTTaGAGGTGCGGCCCTGGATTA +
Preference number: 4 (lower is better)
Translates to: CHFILHLNVHGRIGADLEPAFPS*RCGPGL
Trigger: TAATCCAGGGCCGCACCTCCAACTCGGGAAGGCAGG...CTCCAGGTCAGCTCCGATCCTTCCATGTACATTGAGGTGGAGAATGAAGTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CAA 72 bp TGCATAGGAGGTTGTCTAGGGAGGTCCTGGGTACCCTaGCCCCAGCCTCCCCCAATGTTAACACCTTATACA +
Preference number: 4 (lower is better)
Translates to: CIGGCLGRSWVP*PQPPPMLTPYT
Trigger: TGTATAAGGTGTTAACATTGGGGGAGGCTGGGGCAAGGGTACCCAGGACCTCCCTAGACAACCTCCTATGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
3UTR CAA 72 bp ACAGTCACAGCTTTCCGGTGCCCAACAAAGTCCATGTaGGTCTTCCATCCCTCCCGTTCGATGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: TVTAFRCPTKSM*VFHPSRSMIWA
Trigger: TGCCCAGATCATCGAACGGGAGGGATGGAAGACCAACATGGACTTTGTTGGGCACCGGAAAGCTGTGACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR TCA 90 bp AAATGCTCATTATTAAACCAGCCACAGCCATGCTGGAGGCACCCTGGTTGCCTTCTACCATGCCCAGCCTaGCCTGGCTGCTCACAAGTA +
Preference number: 4 (lower is better)
Translates to: KCSLLNQPQPCWRHPGCLLPCPA*PGCSQV
Trigger: TACTTGTGAGCAGCCAGGTCAGGCTGGGCATGGTAG...AAGGCAACCAGGGTGCCTCCAGCATGGCTGTGGCTGGTTTAATAATGAGCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR TCA 90 bp ATGTACGTAGCCCGCTTCCACACCATAATCAGTTTGTCATCTCCCCCAGAAGCTTCTCAGGGTTCTCAATaGCGGCTGTGGAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: MYVARFHTIISLSSPPEASQGSQ*RLWRAG
Trigger: CCCAGCTCTCCACAGCCGTCATTGAGAACCCTGAGA...AGCTTCTGGGGGAGATGACAAACTGATTATGGTGTGGAAGCGGGCTACGTACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp TACTCAGTTTCCCCAGTTACATCTGTACTCCTTTGTGTACCTAACTCTACACAACCCAGTCGCGGCAGCTaGCCAGGTCGCGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: YSVSPVTSVLLCVPNSTQPSRGS*PGRAAT
Trigger: AGTGGCAGCGCGACCTGGCCAGCTGCCGCGACTGGG...TTGTGTAGAGTTAGGTACACAAAGGAGTACAGATGTAACTGGGGAAACTGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
CDS-3UTR CCA 90 bp TGCTCGGCACACCTGCCTGCATGTGCAGTGGAACTGAGCGAGTGGAGCAGAGTGGAAAGACATTCACAGTaGCACAACTGTTTAGCTACC +
Preference number: 4 (lower is better)
Translates to: CSAHLPACAVELSEWSRVERHSQ*HNCLAT
Trigger: GGTAGCTAAACAGTTGTGCCACTGTGAATGTCTTTC...CACTCTGCTCCACTCGCTCAGTTCCACTGCACATGCAGGCAGGTGTGCCGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp TTCAAAAGATTCTTCCTGATATCTTCAAGACTCTCCCCGTTGACAACGCCTGCGAAAAATCGGCTTGCCTaGGCCTCGGCGTTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: FKRFFLISSRLSPLTTPAKNRLA*ASAFRR
Trigger: GCGCCGGAACGCCGAGGCCCAGGCAAGCCGATTTTT...CGCAGGCGTTGTCAACGGGGAGAGTCTTGAAGATATCAGGAAGAATCTTTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp CTTCTTTCACCACAACCACCTGTCTGTGAACATCCCAGACAGAGAGTGTGGCTGGGCCTGAGTTGTTCATaGCATGGGCAGACACCAGGT +
Preference number: 4 (lower is better)
Translates to: LLSPQPPVCEHPRQRVWLGLSCS*HGQTPG
Trigger: ACCTGGTGTCTGCCCATGCCATGAACAACTCAGGCC...CAGCCACACTCTCTGTCTGGGATGTTCACAGACAGGTGGTTGTGGTGAAAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp ACCGGACCCAGTAAGTCCTTGCATATTTCTCGAAGTCGGTATTCAAACCCTTCGCTGTCGGAGTCATGCTaGTCAGGGCAGGAGCACCTG +
Preference number: 4 (lower is better)
Translates to: TGPSKSLHISRSRYSNPSLSESC*SGQEHL
Trigger: CAGGTGCTCCTGCCCTGACCAGCATGACTCCGACAG...CGAAGGGTTTGAATACCGACTTCGAGAAATATGCAAGGACTTACTGGGTCCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CAA 72 bp AATGCTTGGCCTCCTGGAAGCTCTAAAGCGGTGCAATaGTCCTGCAGAACATCGCAGTGTCAGGGTATCCTG +
Preference number: 4 (lower is better)
Translates to: NAWPPGSSKAVQ*SCRTSQCQGIL
Trigger: CAGGATACCCTGACACTGCGATGTTCTGCAGGACAATTGCACCGCTTTAGAGCTTCCAGGAGGCCAAGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR TCA 90 bp AAATGCTCATTATTAAACCAGCCACAGCCATGCTGGAGGCACCCTGGTTGCCTTTGCTCCATGTTCCTGTaGGCAAGAGCTCACAGGGAC +
Preference number: 4 (lower is better)
Translates to: KCSLLNQPQPCWRHPGCLCSMFL*ARAHRD
Trigger: GTCCCTGTGAGCTCTTGCTCACAGGAACATGGAGCA...AAGGCAACCAGGGTGCCTCCAGCATGGCTGTGGCTGGTTTAATAATGAGCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR TCA 90 bp CATTTCTTAAAAACCAGAGTCTCCAGGGGCCGACCTGGGAGCCTAAGAAGTGAAGAGTGGAGCAGAGTGTaGGCACTCACAATGCTCACC +
Preference number: 4 (lower is better)
Translates to: HFLKTRVSRGRPGSLRSEEWSRV*ALTMLT
Trigger: GGTGAGCATTGTGAGTGCTCACACTCTGCTCCACTC...TTCACTTCTTAGGCTCCCAGGTCGGCCCCTGGAGACTCTGGTTTTTAAGAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR TCA 90 bp GTGAAGGAGGAGGCAAAACATGATAGTCACACTACAGAGGCAGGACTTAATGCTTCTGCCCCAGGAACCTaGAGGCAGCTGCTGCAATCC +
Preference number: 4 (lower is better)
Translates to: VKEEAKHDSHTTEAGLNASAPGT*RQLLQS
Trigger: GGATTGCAGCAGCTGCCTTCAGGTTCCTGGGGCAGA...AGCATTAAGTCCTGCCTCTGTAGTGTGACTATCATGTTTTGCCTCCTCCTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR TCA 90 bp TGTCTGTTTCAAAACTGTGGTCTTATAAGCCTCAAACCCTGTCCAACATGTGGAGGAGCGTGGCTGCACTaGGGGGAAGCCCCTCATGGA +
Preference number: 4 (lower is better)
Translates to: CLFQNCGLISLKPCPTCGGAWLH*GEAPHG
Trigger: TCCATGAGGGGCTTCCCCTCAGTGCAGCCACGCTCC...TCCACATGTTGGACAGGGTTTGAGGCTTATAAGACCACAGTTTTGAAACAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR TCA 90 bp AGCACTCTTCTGGTCCAGCTGCTGCTGCTGCTGCCTTCGCTGGTACTTGAGCATAGGGTGAATATCAACTaGAAAAATCGGCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: STLLVQLLLLLPSLVLEHRVNIN*KNRLAW
Trigger: CCAGGCAAGCCGATTTTTTCAGTTGATATTCACCCT...ATGCTCAAGTACCAGCGAAGGCAGCAGCAGCAGCAGCTGGACCAGAAGAGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR GCA 90 bp TGTCTGTTTCAAAACTGTGGTCTTATAAGCCTCAAACCCTGTCCAACATGTGGAGGAAGTGCCTGGCGCTaGGGCAGAGCTTCCACTCGG +
Preference number: 4 (lower is better)
Translates to: CLFQNCGLISLKPCPTCGGSAWR*GRASTR
Trigger: CCGAGTGGAAGCTCTGCCGCAGCGCCAGGCACTTCC...TCCACATGTTGGACAGGGTTTGAGGCTTATAAGACCACAGTTTTGAAACAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR GCA 90 bp AGATTGGCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTCTGGCCAGGTCGCGCTaGCACTGTTCGCAGGCCGGC +
Preference number: 4 (lower is better)
Translates to: RLAVFALKNFLEFHLSCCLARSR*HCSQAG
Trigger: GCCGGCCTGCGAACAGTGGCAGCGCGACCTGGCCAG...ACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGCCAATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
CDS-3UTR CCA 90 bp GTTAACACCTTATACACTACAGCACAGCATCAGGACGCAGAAATTGACATTGGTTCACAGAGGGATTGCTaGGCCTCGGCGTTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: VNTLYTTAQHQDAEIDIGSQRDC*ASAFRR
Trigger: GCGCCGGAACGCCGAGGCCCAGCAATCCCTCTGTGA...ACCAATGTCAATTTCTGCGTCCTGATGCTGTGCTGTAGTGTATAAGGTGTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp AGTCTGCACACTGAGCCAGTGAGTCCTGCTTGTCAGAAACCAGGTTCCTGCCAGATCCTCCTGGAGGACTaGAGACATATTCCAGATCAC +
Preference number: 4 (lower is better)
Translates to: SLHTEPVSPACQKPGSCQILLED*RHIPDH
Trigger: GTGATCTGGAATATGTCTCCAGTCCTCCAGGAGGAT...CTGGCAGGAACCTGGTTTCTGACAAGCAGGACTCACTGGCTCAGTGTGCAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp CTTCTTTCACCACAACCACCTGTCTGTGAACATCCCAGACAGAGAGTGTGGCTGGTGCAGACAGACACATaGCCTCCTTCTCTGCGGTTA +
Preference number: 4 (lower is better)
Translates to: LLSPQPPVCEHPRQRVWLVQTDT*PPSLRL
Trigger: TAACCGCAGAGAAGGAGGCCATGTGTCTGTCTGCAC...CAGCCACACTCTCTGTCTGGGATGTTCACAGACAGGTGGTTGTGGTGAAAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp ATGTACGTAGCCCGCTTCCACACCATAATCAGTTTGTCATCTCCCCCAGAAGCTCTGGGGGCTTGGAATTaGCAGCTTCAGTGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: MYVARFHTIISLSSPPEALGAWN*QLQCKC
Trigger: GCACTTGCACTGAAGCTGCCAATTCCAAGCCCCCAG...AGCTTCTGGGGGAGATGACAAACTGATTATGGTGTGGAAGCGGGCTACGTACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp GAGTCAAACGCTTTCATGGGTTCGATCTTGGACGGGGTCGTTAACACAGAAGGTAGTAGAGATCGGGGATaGCAGGAGGATGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: ESNAFMGSILDGVVNTEGSRDRG*QEDGRE
Trigger: CTCTCTCCCATCCTCCTGCCATCCCCGATCTCTACT...ACCTTCTGTGTTAACGACCCCGTCCAAGATCGAACCCATGAAAGCGTTTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp ACCGGACCCAGTAAGTCCTTGCATATTTCTCGAAGTCGGTATTCAAACCCTTCGCATGGCGTCCTGGGATaGCAGGCTGCTCCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: TGPSKSLHISRSRYSNPSHGVLG*QAAPKV
Trigger: GACTTTAGGAGCAGCCTGCCATCCCAGGACGCCATG...CGAAGGGTTTGAATACCGACTTCGAGAAATATGCAAGGACTTACTGGGTCCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp GAGTCAAACGCTTTCATGGGTTCGATCTTGGACGGGGTCGTTAACACAGAAGGTTGCGGCCCTGGATTATaGCTAACGGTCCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: ESNAFMGSILDGVVNTEGCGPGL*LTVLST
Trigger: TGTGCTCAGGACCGTTAGCCATAATCCAGGGCCGCA...ACCTTCTGTGTTAACGACCCCGTCCAAGATCGAACCCATGAAAGCGTTTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR TCA 90 bp ACACCTGCCTGCATGTGCAGTGGAACTGAGCGAGTGGAGCAGAGTGTGAGCACTTTGGATTTCTTCAGCTaGGTCCACAAACCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: TPACMCSGTERVEQSVSTLDFFS*VHKPSL
Trigger: TAAAGAGGGTTTGTGGACTCAGCTGAAGAAATCCAA...AGTGCTCACACTCTGCTCCACTCGCTCAGTTCCACTGCACATGCAGGCAGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR TCA 90 bp GAGTCAAACGCTTTCATGGGTTCGATCTTGGACGGGGTCGTTAACACAGAAGGTCATCAAAAGGCTTGGTaGTGCTGGTCTCCAACTGCC +
Preference number: 4 (lower is better)
Translates to: ESNAFMGSILDGVVNTEGHQKAW*CWSPTA
Trigger: GGCAGTTGGAGACCAGCATCACCAAGCCTTTTGATG...ACCTTCTGTGTTAACGACCCCGTCCAAGATCGAACCCATGAAAGCGTTTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR GCA 90 bp TTGGCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTGTGTGCAGCCCGGACTCGTaGCCGCTCGCTCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: LAVFALKNFLEFHLSCCVCSPDS*PLALTE
Trigger: CTCTGTGAGAGCGAGCGGGCACGAGTCCGGGCTGCA...CACACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR GCA 90 bp ACAAATGCAGGAACATCCTGTCCAGAGAGATTATCTGTTGATGTGGAACTTGAGGGTCCTGGGTACCCTTaGCCCAGCCTCCCCCAATGT +
Preference number: 4 (lower is better)
Translates to: TNAGTSCPERLSVDVELEGPGYP*PSLPQC
Trigger: ACATTGGGGGAGGCTGGGGCAAGGGTACCCAGGACC...CTCAAGTTCCACATCAACAGATAATCTCTCTGGACAGGATGTTCCTGCATTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp TGCAATTGTCCTGCAGAACATCGCAGTGTCAGGGTATCCTGCATGCAGGTGAGGACCTGCCATAATGCTTaGCCTCCTGGAAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: CNCPAEHRSVRVSCMQVRTCHNA*PPGSSK
Trigger: TTTAGAGCTTCCAGGAGGCCAAGCATTATGGCAGGT...CCTCACCTGCATGCAGGATACCCTGACACTGCGATGTTCTGCAGGACAATTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp AGGAGGTTGCATAGGAGGTTGTCTAGGGAGGTCCTGGGTACCCTTGCCCCAGCCTCTGTTTCAAAACTGTaGTCTTATAAGCCTCAAACC +
Preference number: 4 (lower is better)
Translates to: RRLHRRLSREVLGTLAPASVSKL*SYKPQT
Trigger: GGTTTGAGGCTTATAAGACCACAGTTTTGAAACAGA...GGCTGGGGCAAGGGTACCCAGGACCTCCCTAGACAACCTCCTATGCAACCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp TACTCAGTTTCCCCAGTTACATCTGTACTCCTTTGTGTACCTAACTCTACACAAACCACACTTAGCACCTaGGCCTCGGCGTTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: YSVSPVTSVLLCVPNSTQTTLST*ASAFRR
Trigger: GCGCCGGAACGCCGAGGCCCAGGTGCTAAGTGTGGT...TTGTGTAGAGTTAGGTACACAAAGGAGTACAGATGTAACTGGGGAAACTGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399568.5
CDS-3UTR CCA 90 bp TTCAAAAGATTCTTCCTGATATCTTCAAGACTCTCCCCGTTGACAACGCCTGCGTGGCAAGCTTACCACTaGAGCCGAACACGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FKRFFLISSRLSPLTTPAWQAYH*SRTRCW
Trigger: CCAGCACCGTGTTCGGCTCCAGTGGTAAGCTTGCCA...CGCAGGCGTTGTCAACGGGGAGAGTCTTGAAGATATCAGGAAGAATCTTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp CCGGACCCAGTAAGTCCTTGCATATTTCTCGAAGTCGGTATTCAAACCCTTCGTTGCTGCTGCCTTCGCTaGTACTTGAGCATCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PDPVSPCIFLEVGIQTLRCCCLR*YLSISG
Trigger: CCCTGAGATGCTCAAGTACCAGCGAAGGCAGCAGCA...ACGAAGGGTTTGAATACCGACTTCGAGAAATATGCAAGGACTTACTGGGTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CCA 90 bp ACCGGACCCAGTAAGTCCTTGCATATTTCTCGAAGTCGGTATTCAAACCCTTCGTGCTCTCTGGGGGCTTaGAATTGGCAGCTTCAGTGC +
Preference number: 4 (lower is better)
Translates to: TGPSKSLHISRSRYSNPSCSLGA*NWQLQC
Trigger: GCACTGAAGCTGCCAATTCCAAGCCCCCAGAGAGCA...CGAAGGGTTTGAATACCGACTTCGAGAAATATGCAAGGACTTACTGGGTCCGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CAA 72 bp AAAAGATTCTTCCTGATATCTTCAAGACTCTCCCCGTaGACAACGCCTGCGACTGAGGTGGCTGAGCCCATC +
Preference number: 4 (lower is better)
Translates to: KRFFLISSRLSP*TTPATEVAEPI
Trigger: GATGGGCTCAGCCACCTCAGTCGCAGGCGTTGTCAACGGGGAGAGTCTTGAAGATATCAGGAAGAATCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CAA 72 bp GTGAACCGGGAGTCAAACGCTTTCATGGGTTCGATCTaGGACGGGGTCGTTAACACAGAAGGTGACAATGCA +
Preference number: 4 (lower is better)
Translates to: VNRESNAFMGSI*DGVVNTEGDNA
Trigger: TGCATTGTCACCTTCTGTGTTAACGACCCCGTCCAAGATCGAACCCATGAAAGCGTTTGACTCCCGGTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR TCA 90 bp AGATTGGCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTGCTCTTGGGATCCCGTaGGCACAACCCCCACCCCCA +
Preference number: 4 (lower is better)
Translates to: RLAVFALKNFLEFHLSCCALGIP*AQPPPP
Trigger: TGGGGGTGGGGGTTGTGCTCACGGGATCCCAAGAGC...ACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGCCAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR TCA 90 bp ACCGGACCCAGTAAGTCCTTGCATATTTCTCGAAGTCGGTATTCAAACCCTTCGCAAACAGTTCATGGATaGCCACCAGCGGCCGTTTCA +
Preference number: 4 (lower is better)
Translates to: TGPSKSLHISRSRYSNPSQTVHG*PPAAVS
Trigger: TGAAACGGCCGCTGGTGGTCATCCATGAACTGTTTG...CGAAGGGTTTGAATACCGACTTCGAGAAATATGCAAGGACTTACTGGGTCCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR GCA 90 bp AGATTGGCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTGGAAGTGCCTGGCGCTaGGGCAGAGCTTCCACTCGG +
Preference number: 4 (lower is better)
Translates to: RLAVFALKNFLEFHLSCCGSAWR*GRASTR
Trigger: CCGAGTGGAAGCTCTGCCGCAGCGCCAGGCACTTCC...ACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGCCAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
CDS-3UTR GCA 90 bp GCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTGTGTACGCCCACACCAGGATGTaGTTCCGTGCAGCCCGGACT +
Preference number: 4 (lower is better)
Translates to: AVFALKNFLEFHLSCCVYAHTRM*FRAART
Trigger: AGTCCGGGCTGCACGGAAGCACATCCTGGTGTGGGC...GTACACACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR GCA 90 bp TGGTACAGTCTACAGAACATACTCAGTTTCCCCAGTTACATCTGTACTCCTTTGCCTGCTCGGCACACCTaGCTGCATGTGCAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: WYSLQNILSFPSYICTPLPARHT*LHVQWN
Trigger: GTTCCACTGCACATGCAGGCAGGTGTGCCGAGCAGG...CAAAGGAGTACAGATGTAACTGGGGAAACTGAGTATGTTCTGTAGACTGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR GCA 90 bp AGATTGGCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTCCTCATGGACTGGGGTaGTGGCTGGCATGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: RLAVFALKNFLEFHLSCCPHGLG*WLACPG
Trigger: GCCAGGGCATGCCAGCCAGCACCCCAGTCCATGAGG...ACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGCCAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR GCA 90 bp GCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTGTGTACGGTCCTGGGTACCCTTaGCCCAGCCTCCCCCAATGT +
Preference number: 4 (lower is better)
Translates to: AVFALKNFLEFHLSCCVYGPGYP*PSLPQC
Trigger: ACATTGGGGGAGGCTGGGGCAAGGGTACCCAGGACC...GTACACACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
CDS-3UTR CCA 90 bp GTTTCATCTGAGTTGCTGTGTGTACAGCAGTTACTGAAAATGGCACTATATCACGGTGTAGGAAGTGCCTaGCGCTGCGGCAGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: VSSELLCVQQLLKMALYHGVGSA*RCGRAS
Trigger: GGAAGCTCTGCCGCAGCGCCAGGCACTTCCTACACC...GTGATATAGTGCCATTTTCAGTAACTGCTGTACACACAGCAACTCAGATGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
CDS-3UTR CCA 90 bp CAGCACAGCATCAGGACGCAGAAATTGACATTGGTACAGTCTACAGAACATACTAGCTTCCCGAGTAGCTaGGATCACAGGCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: QHSIRTQKLTLVQSTEHTSFPSS*DHRHVP
Trigger: TGGCACGTGCCTGTGATCCCAGCTACTCGGGAAGCT...AGTATGTTCTGTAGACTGTACCAATGTCAATTTCTGCGTCCTGATGCTGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp ACAACTTGTCTGTTTCAAAACTGTGGTCTTATAAGCCTCAAACCCTGTCCAACAAAGCCCCTCATGGACTaGGGTGCTGGCTGGCATGCC +
Preference number: 4 (lower is better)
Translates to: TTCLFQNCGLISLKPCPTKPLMD*GAGWHA
Trigger: GGCATGCCAGCCAGCACCCCAGTCCATGAGGGGCTT...TGTTGGACAGGGTTTGAGGCTTATAAGACCACAGTTTTGAAACAGACAAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp GCATACCAAGATGCCCAGCCCATTCAGAGTCCAGGAAATATCCATGATGGATTTTTGGAGGTGCGGCCCTaGATTATGGCTAACGGTCCT +
Preference number: 4 (lower is better)
Translates to: AYQDAQPIQSPGNIHDGFLEVRP*IMANGP
Trigger: AGGACCGTTAGCCATAATCCAGGGCCGCACCTCCAA...AAATCCATCATGGATATTTCCTGGACTCTGAATGGGCTGGGCATCTTGGTATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CAA 72 bp CCGATGTACGTAGCCCGCTTCCACACCATAATCAGTTaGTCATCTCCCCCAGAAGCTAAATACATCCCACTG +
Preference number: 4 (lower is better)
Translates to: PMYVARFHTIIS*SSPPEAKYIPL
Trigger: CAGTGGGATGTATTTAGCTTCTGGGGGAGATGACAAACTGATTATGGTGTGGAAGCGGGCTACGTACATCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR TCA 90 bp ACCTGCCATAATGCTTGGCCTCCTGGAAGCTCTAAAGCGGTGCAATTGTCCTGCAGGGCCACCATAGGATaGGAAACCATTCTATTAGTA +
Preference number: 4 (lower is better)
Translates to: TCHNAWPPGSSKAVQLSCRATIG*ETILLV
Trigger: TACTAATAGAATGGTTTCTCATCCTATGGTGGCCCT...GCAGGACAATTGCACCGCTTTAGAGCTTCCAGGAGGCCAAGCATTATGGCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR TCA 90 bp TTCACGACAGTCACAGCTTTCCGGTGCCCAACAAAGTCCATGTTGGTCTTCCATATCACATCGCCTGAATaGTTCCGGAGGATAGAGACA +
Preference number: 4 (lower is better)
Translates to: FTTVTAFRCPTKSMLVFHITSPE*FRRIET
Trigger: TGTCTCTATCCTCCGGAATCATTCAGGCGATGTGAT...ATGGAAGACCAACATGGACTTTGTTGGGCACCGGAAAGCTGTGACTGTCGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR GCA 90 bp TCCTGCTACATGTATGTTTTCAAGATTGGCTGTTTTTGCTCTGAAGAATTTCCTCAGGATGTGCTTCCGTaGAGCCCGGACTCGTGCCCG +
Preference number: 4 (lower is better)
Translates to: SCYMYVFKIGCFCSEEFPQDVLP*SPDSCP
Trigger: CGGGCACGAGTCCGGGCTGCACGGAAGCACATCCTG...AGGAAATTCTTCAGAGCAAAAACAGCCAATCTTGAAAACATACATGTAGCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR GCA 90 bp GTGAAGGAGGAGGCAAAACATGATAGTCACACTACAGAGGCAGGACTTAATGCTCAGTCCCCAGGGCTGTaGAACAGCAACTTGAAACAG +
Preference number: 4 (lower is better)
Translates to: VKEEAKHDSHTTEAGLNAQSPGL*NSNLKQ
Trigger: CTGTTTCAAGTTGCTGTTGCACAGCCCTGGGGACTG...AGCATTAAGTCCTGCCTCTGTAGTGTGACTATCATGTTTTGCCTCCTCCTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR GCA 90 bp TGTCTGTTTCAAAACTGTGGTCTTATAAGCCTCAAACCCTGTCCAACATGTGGAAGTGTCAGGGTATCCTaGATGCAGGTGAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: CLFQNCGLISLKPCPTCGSVRVS*MQVRGG
Trigger: CCCACCCCTCACCTGCATGCAGGATACCCTGACACT...TCCACATGTTGGACAGGGTTTGAGGCTTATAAGACCACAGTTTTGAAACAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR GCA 90 bp TGTCTGTTTCAAAACTGTGGTCTTATAAGCCTCAAACCCTGTCCAACATGTGGAGACCGCCATCTCCTATaGTACCATGCCCAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: CLFQNCGLISLKPCPTCGDRHLL*YHAQPD
Trigger: GTCAGGCTGGGCATGGTAGCATAGGAGATGGCGGTC...TCCACATGTTGGACAGGGTTTGAGGCTTATAAGACCACAGTTTTGAAACAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR GCA 90 bp CAGCACAGCATCAGGACGCAGAAATTGACATTGGTACAGTCTACAGAACATACTACACCTGCCTGCATGTaGAGTGGAACTGAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: QHSIRTQKLTLVQSTEHTTPACM*SGTERV
Trigger: CACTCGCTCAGTTCCACTGCACATGCAGGCAGGTGT...AGTATGTTCTGTAGACTGTACCAATGTCAATTTCTGCGTCCTGATGCTGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR GCA 90 bp GCTTGGCCTCCTGGAAGCTCTAAAGCGGTGCAATTGTCCTGCAGAACATCGCAGCACAAACCCTCTTTATaGAAGGTTGTGTGTTCTGTA +
Preference number: 4 (lower is better)
Translates to: AWPPGSSKAVQLSCRTSQHKPSL*KVVCSV
Trigger: TACAGAACACACAACCTTGCATAAAGAGGGTTTGTG...CTGCGATGTTCTGCAGGACAATTGCACCGCTTTAGAGCTTCCAGGAGGCCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR GCA 90 bp TGGTACAGTCTACAGAACATACTCAGTTTCCCCAGTTACATCTGTACTCCTTTGTGCACTCTCCAGCTCTaGCCCAGGAACCTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: WYSLQNILSFPSYICTPLCTLQL*PRNLKA
Trigger: TGCCTTCAGGTTCCTGGGGCAGAGCTGGAGAGTGCA...CAAAGGAGTACAGATGTAACTGGGGAAACTGAGTATGTTCTGTAGACTGTACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp CATTGGTACAGTCTACAGAACATACTCAGTTTCCCCAGTTACATCTGTACTCCTCTCGTCCTTCTCCTGTaGCAGAGGGAGATGCCAGTC +
Preference number: 4 (lower is better)
Translates to: HWYSLQNILSFPSYICTPLVLLL*QREMPV
Trigger: GACTGGCATCTCCCTCTGCCACAGGAGAAGGACGAG...AGGAGTACAGATGTAACTGGGGAAACTGAGTATGTTCTGTAGACTGTACCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp ACAAATGCAGGAACATCCTGTCCAGAGAGATTATCTGTTGATGTGGAACTTGAGATGCCCAGCCTGACCTaGCTGCTCACAAGTACCTGC +
Preference number: 4 (lower is better)
Translates to: TNAGTSCPERLSVDVELEMPSLT*LLTSTC
Trigger: GCAGGTACTTGTGAGCAGCCAGGTCAGGCTGGGCAT...CTCAAGTTCCACATCAACAGATAATCTCTCTGGACAGGATGTTCCTGCATTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp GCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTGTGTACGACTGGGGTGCTGGCTaGCATGCCCTGGCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: AVFALKNFLEFHLSCCVYDWGAG*HALAFA
Trigger: AGCAAAAGCCAGGGCATGCCAGCCAGCACCCCAGTC...GTACACACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR TCA 90 bp TGTCTGTTTCAAAACTGTGGTCTTATAAGCCTCAAACCCTGTCCAACATGTGGACATGTGCAGTGGAACTaGGCGAGTGGAGCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: CLFQNCGLISLKPCPTCGHVQWN*ASGAEC
Trigger: ACACTCTGCTCCACTCGCTCAGTTCCACTGCACATG...TCCACATGTTGGACAGGGTTTGAGGCTTATAAGACCACAGTTTTGAAACAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR TCA 90 bp GCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTGTGTACTGGGAGCCTAAGAAGTaGAGCCTGCTGGTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: AVFALKNFLEFHLSCCVYWEPKK*SLLVQR
Trigger: CCTCTGCACCAGCAGGCTTCACTTCTTAGGCTCCCA...GTACACACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR TCA 90 bp ATGTACGTAGCCCGCTTCCACACCATAATCAGTTTGTCATCTCCCCCAGAAGCTCTGCGGTCATCAGCTTaGGAAGCTATGTATTTACCA +
Preference number: 4 (lower is better)
Translates to: MYVARFHTIISLSSPPEALRSSA*EAMYLP
Trigger: TGGTAAATACATAGCTTCTCAAGCTGATGACCGCAG...AGCTTCTGGGGGAGATGACAAACTGATTATGGTGTGGAAGCGGGCTACGTACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR GCA 90 bp AGATTGGCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTAACCAGCCACAGCCATaGTGGAGGCACCCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: RLAVFALKNFLEFHLSCCNQPQP*WRHPGC
Trigger: GCAACCAGGGTGCCTCCAGCATGGCTGTGGCTGGTT...ACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGCCAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR GCA 90 bp ACAACTTGTCTGTTTCAAAACTGTGGTCTTATAAGCCTCAAACCCTGTCCAACAGCATGCCCTGGCTTTTaGTGCACTCTCCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TTCLFQNCGLISLKPCPTACPGF*CTLQLC
Trigger: GCAGAGCTGGAGAGTGCAGCAAAAGCCAGGGCATGC...TGTTGGACAGGGTTTGAGGCTTATAAGACCACAGTTTTGAAACAGACAAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp TTCAAAAGATTCTTCCTGATATCTTCAAGACTCTCCCCGTTGACAACGCCTGCGTCATGGGTTCGATCTTaGACGGGGTCGTTAACACAG +
Preference number: 4 (lower is better)
Translates to: FKRFFLISSRLSPLTTPASWVRS*TGSLTQ
Trigger: CTGTGTTAACGACCCCGTCCAAGATCGAACCCATGA...CGCAGGCGTTGTCAACGGGGAGAGTCTTGAAGATATCAGGAAGAATCTTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR TCA 90 bp GTGAAGGAGGAGGCAAAACATGATAGTCACACTACAGAGGCAGGACTTAATGCTTTAGCTACCTCATTATaGCCCACCTGTGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: VKEEAKHDSHTTEAGLNALATSL*PTCVST
Trigger: TGTGGACACACAGGTGGGTCATAATGAGGTAGCTAA...AGCATTAAGTCCTGCCTCTGTAGTGTGACTATCATGTTTTGCCTCCTCCTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR TCA 90 bp ACCGGACCCAGTAAGTCCTTGCATATTTCTCGAAGTCGGTATTCAAACCCTTCGTTCACACATGCTAAGTaGTTGTCCATCTGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: TGPSKSLHISRSRYSNPSFTHAK*LSIWQS
Trigger: GCTTTGCCAGATGGACAATCACTTAGCATGTGTGAA...CGAAGGGTTTGAATACCGACTTCGAGAAATATGCAAGGACTTACTGGGTCCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR TCA 90 bp GATGGATTTGTCAAACAGTTCATGGATGACCACCAGCGGCCGTTTCAGACATGTTCATACTGTCTTTATTaGCAGAATCGCCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: DGFVKQFMDDHQRPFQTCSYCLY*QNRLQV
Trigger: GACCTGCAGGCGATTCTGTCAATAAAGACAGTATGA...ACATGTCTGAAACGGCCGCTGGTGGTCATCCATGAACTGTTTGACAAATCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR GCA 90 bp TGTCTGTTTCAAAACTGTGGTCTTATAAGCCTCAAACCCTGTCCAACATGTGGACTCTTTAGATGCTCCTaGTCTTGGGATCCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: CLFQNCGLISLKPCPTCGLFRCS*SWDPVS
Trigger: GCTCACGGGATCCCAAGAGCAGGAGCATCTAAAGAG...TCCACATGTTGGACAGGGTTTGAGGCTTATAAGACCACAGTTTTGAAACAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR GCA 90 bp CAGCACAGCATCAGGACGCAGAAATTGACATTGGTACAGTCTACAGAACATACTTGGAGGCACCCTGGTTaGCTTAGACACATCAGTACT +
Preference number: 4 (lower is better)
Translates to: QHSIRTQKLTLVQSTEHTWRHPG*LRHIST
Trigger: AGTACTGATGTGTCTAAGGCAACCAGGGTGCCTCCA...AGTATGTTCTGTAGACTGTACCAATGTCAATTTCTGCGTCCTGATGCTGTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp TTGGCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTGTGAGCTGCACAGGCCAATaGCAGGGATGCTTGTCACTC +
Preference number: 4 (lower is better)
Translates to: LAVFALKNFLEFHLSCCVSCTGQ*QGCLSL
Trigger: GAGTGACAAGCATCCCTGCCATTGGCCTGTGCAGCT...CACACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp TTGGCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTGTGAGATGCTCCTGCTCTTaGGATCCCGTGAGCACAACC +
Preference number: 4 (lower is better)
Translates to: LAVFALKNFLEFHLSCCVRCSCS*DPVSTT
Trigger: GGTTGTGCTCACGGGATCCCAAGAGCAGGAGCATCT...CACACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp TGGTACAGTCTACAGAACATACTCAGTTTCCCCAGTTACATCTGTACTCCTTTGATGATGGGGGAACGCTaGCTCCTCTTTAGATGCTCC +
Preference number: 4 (lower is better)
Translates to: WYSLQNILSFPSYICTPLMMGER*LLFRCS
Trigger: GGAGCATCTAAAGAGGAGCCAGCGTTCCCCCATCAT...CAAAGGAGTACAGATGTAACTGGGGAAACTGAGTATGTTCTGTAGACTGTACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR CAA 72 bp TGTCATCTCCCCCAGAAGCTAAATACATCCCACTGTTaGACCACCGCACACAGTTCACACATGCTAAGTGAT +
Preference number: 4 (lower is better)
Translates to: CHLPQKLNTSHC*TTAHSSHMLSD
Trigger: ATCACTTAGCATGTGTGAACTGTGTGCGGTGGTCAAACAGTGGGATGTATTTAGCTTCTGGGGGAGATGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509549.5
3UTR CAA 72 bp TTCTCTACTGTCTCTACCTCAAGCTCAAGTTTTCGCTaGGACAGTGAGGAAGCCTTAGCCAAAGGGACTTTC +
Preference number: 4 (lower is better)
Translates to: FSTVSTSSSSFR*DSEEALAKGTF
Trigger: GAAAGTCCCTTTGGCTAAGGCTTCCTCACTGTCCAAGCGAAAACTTGAGCTTGAGGTAGAGACAGTAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR GCA 90 bp ACAACTTGTCTGTTTCAAAACTGTGGTCTTATAAGCCTCAAACCCTGTCCAACATGGCTCCTCTTTAGATaGTCCTGCTCTTGGGATCCC +
Preference number: 4 (lower is better)
Translates to: TTCLFQNCGLISLKPCPTWLLFR*SCSWDP
Trigger: GGGATCCCAAGAGCAGGAGCATCTAAAGAGGAGCCA...TGTTGGACAGGGTTTGAGGCTTATAAGACCACAGTTTTGAAACAGACAAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR GCA 90 bp GTTAACACCTTATACACTACAGCACAGCATCAGGACGCAGAAATTGACATTGGTGGGATTACAGCAGACTaGAAATTCAGATGCCCCGTC +
Preference number: 4 (lower is better)
Translates to: VNTLYTTAQHQDAEIDIGGITAD*KFRCPV
Trigger: GACGGGGCATCTGAATTTGCAGTCTGCTGTAATCCC...ACCAATGTCAATTTCTGCGTCCTGATGCTGTGCTGTAGTGTATAAGGTGTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR GCA 90 bp TTGGCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTGTGTCACCCAGGTTGAAGTaGAGTGGGGCACAATCATGG +
Preference number: 4 (lower is better)
Translates to: LAVFALKNFLEFHLSCCVSPRLK*SGAQSW
Trigger: CCATGATTGTGCCCCACTGCACTTCAACCTGGGTGA...CACACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp TCCTGCTACATGTATGTTTTCAAGATTGGCTGTTTTTGCTCTGAAGAATTTCCTCTGGCTGGCATGCCCTaGCTTTTGCTGCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: SCYMYVFKIGCFCSEEFPLAGMP*LLLHSP
Trigger: TGGAGAGTGCAGCAAAAGCCAGGGCATGCCAGCCAG...AGGAAATTCTTCAGAGCAAAAACAGCCAATCTTGAAAACATACATGTAGCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR TCA 90 bp TTGGCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTGTGCAACTTGAAACAGACTaGGGAAGCTGCACAGGCCAA +
Preference number: 4 (lower is better)
Translates to: LAVFALKNFLEFHLSCCVQLETD*GSCTGQ
Trigger: TTGGCCTGTGCAGCTTCCTCAGTCTGTTTCAAGTTG...CACACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR TCA 90 bp CAGCACAGCATCAGGACGCAGAAATTGACATTGGTACAGTCTACAGAACATACTTCCTTGAGTTTCATCTaGGTTGCTGTGTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: QHSIRTQKLTLVQSTEHTSLSFI*VAVCTA
Trigger: TGCTGTACACACAGCAACTCAGATGAAACTCAAGGA...AGTATGTTCTGTAGACTGTACCAATGTCAATTTCTGCGTCCTGATGCTGTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
CDS-3UTR TCA 90 bp TTGGCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTGTGAACCACCAGTCAGGCTaGCAGATGGTTTTCAACACC +
Preference number: 4 (lower is better)
Translates to: LAVFALKNFLEFHLSCCVNHQSG*QMVFNT
Trigger: GGTGTTGAAAACCATCTGTCAGCCTGACTGGTGGTT...CACACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
CDS-3UTR TCA 90 bp TGTCACTTCATTCTCCACCTCAATGTACATGGAAGGATCGGAGCTGACCTGGAGTCCAGGAAATATCCATaGTGGATTTGTCAAACAGTT +
Preference number: 4 (lower is better)
Translates to: CHFILHLNVHGRIGADLESRKYP*WICQTV
Trigger: AACTGTTTGACAAATCCATCATGGATATTTCCTGGA...CTCCAGGTCAGCTCCGATCCTTCCATGTACATTGAGGTGGAGAATGAAGTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR GCA 90 bp AGATTGGCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTGCGGTGCAATTGTCCTaGAGAACATCGCAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: RLAVFALKNFLEFHLSCCAVQLS*RTSQCQ
Trigger: CTGACACTGCGATGTTCTGCAGGACAATTGCACCGC...ACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGCCAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR GCA 90 bp TTGGCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTGTGCTGCTCACAAGTACCTaGCATAATGCTTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LAVFALKNFLEFHLSCCVLLTST*HNAWPP
Trigger: AGGAGGCCAAGCATTATGGCAGGTACTTGTGAGCAG...CACACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR GCA 90 bp GTTTCATCTGAGTTGCTGTGTGTACAGCAGTTACTGAAAATGGCACTATATCACTGTGAGCACTCACAATaGTCACCAAACCTGGGACGT +
Preference number: 4 (lower is better)
Translates to: VSSELLCVQQLLKMALYHCEHSQ*SPNLGR
Trigger: ACGTCCCAGGTTTGGTGAGCATTGTGAGTGCTCACA...GTGATATAGTGCCATTTTCAGTAACTGCTGTACACACAGCAACTCAGATGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR GCA 90 bp AATTCCATATGTCTTGGACTTGGATTTCTTCAGCTGAGTCCACAAACCCTCTTTCTTCCTAACAGAGCATaGAGCCGCACAATGCATACC +
Preference number: 4 (lower is better)
Translates to: NSICLGLGFLQLSPQTLFLPNRA*SRTMHT
Trigger: GGTATGCATTGTGCGGCTGCATGCTCTGTTAGGAAG...AAAGAGGGTTTGTGGACTCAGCTGAAGAAATCCAAGTCCAAGACATATGGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR GCA 90 bp GTTAACACCTTATACACTACAGCACAGCATCAGGACGCAGAAATTGACATTGGTAGATTCACAGGAGGTTaGATAGGAGGTTGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: VNTLYTTAQHQDAEIDIGRFTGG*IGGCLG
Trigger: CCCTAGACAACCTCCTATGCAACCTCCTGTGAATCT...ACCAATGTCAATTTCTGCGTCCTGATGCTGTGCTGTAGTGTATAAGGTGTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
CDS-3UTR GCA 90 bp CATTGGTACAGTCTACAGAACATACTCAGTTTCCCCAGTTACATCTGTACTCCTAGATTCACAGGAGGTTaGATAGGAGGTTGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: HWYSLQNILSFPSYICTPRFTGG*IGGCLG
Trigger: CCCTAGACAACCTCCTATGCAACCTCCTGTGAATCT...AGGAGTACAGATGTAACTGGGGAAACTGAGTATGTTCTGTAGACTGTACCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
CDS-3UTR CCA 90 bp GCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTGTGTACAGCCTCCGAAGTAGCTaGAACTACAAATGCACGCCA +
Preference number: 4 (lower is better)
Translates to: AVFALKNFLEFHLSCCVYSLRSS*NYKCTP
Trigger: TGGCGTGCATTTGTAGTTCCAGCTACTTCGGAGGCT...GTACACACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR TCA 90 bp AATTCCATATGTCTTGGACTTGGATTTCTTCAGCTGAGTCCACAAACCCTCTTTTGTGCAACAGCAACTTaGAACAGACTGAGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: NSICLGLGFLQLSPQTLFCATAT*NRLRKL
Trigger: CAGCTTCCTCAGTCTGTTTCAAGTTGCTGTTGCACA...AAAGAGGGTTTGTGGACTCAGCTGAAGAAATCCAAGTCCAAGACATATGGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR GCA 90 bp TCCTGCTACATGTATGTTTTCAAGATTGGCTGTTTTTGCTCTGAAGAATTTCCTACAATCATGGCTCACTaGAGCCTCAAACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SCYMYVFKIGCFCSEEFPTIMAH*SLKLLG
Trigger: GCCCAGGAGTTTGAGGCTGCAGTGAGCCATGATTGT...AGGAAATTCTTCAGAGCAAAAACAGCCAATCTTGAAAACATACATGTAGCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp TCCTGCTACATGTATGTTTTCAAGATTGGCTGTTTTTGCTCTGAAGAATTTCCTAATGCTCACCAAACCTaGGACGTGGCAGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: SCYMYVFKIGCFCSEEFPNAHQT*DVAGSF
Trigger: GAAACTGCCTGCCACGTCCCAGGTTTGGTGAGCATT...AGGAAATTCTTCAGAGCAAAAACAGCCAATCTTGAAAACATACATGTAGCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp TGTCTGTTTCAAAACTGTGGTCTTATAAGCCTCAAACCCTGTCCAACATGTGGAACCCTGTCCAACATGTaGACACTCAGATGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: CLFQNCGLISLKPCPTCGTLSNM*TLRCCE
Trigger: TTCACAACATCTGAGTGTCCACATGTTGGACAGGGT...TCCACATGTTGGACAGGGTTTGAGGCTTATAAGACCACAGTTTTGAAACAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR CAA 72 bp GATTCTTCTCCGGCCATCTGCTGTCCGAGTCTCAACTaGTTTCTTCAAAAGATTCTTCCTGATATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: DSSPAICCPSLN*FLQKILPDIFK
Trigger: CTTGAAGATATCAGGAAGAATCTTTTGAAGAAACAAGTTGAGACTCGGACAGCAGATGGCCGGAGAAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR TCA 90 bp CAGCACAGCATCAGGACGCAGAAATTGACATTGGTACAGTCTACAGAACATACTGTGTACAGCAGTTACTaGAAATGGCACTATATCACA +
Preference number: 4 (lower is better)
Translates to: QHSIRTQKLTLVQSTEHTVYSSY*KWHYIT
Trigger: TGTGATATAGTGCCATTTTCAGTAACTGCTGTACAC...AGTATGTTCTGTAGACTGTACCAATGTCAATTTCTGCGTCCTGATGCTGTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
CDS-3UTR GCA 90 bp GCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTGTGTACAGATATTCAACTTGCTaGCTGTGTCCAGGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: AVFALKNFLEFHLSCCVYRYSTC*LCPGRE
Trigger: CTCTCTTCCTGGACACAGGCAGCAAGTTGAATATCT...GTACACACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR GCA 90 bp GCAGTCTTCCTCTCTTCCCTCACTGGGTGGAAATGCTCATTATTAAACCAGCCAGCATCACATGCAGGCTaGAAACTCATTTTATTATTT +
Preference number: 4 (lower is better)
Translates to: AVFLSSLTGWKCSLLNQPASHAG*KLILLF
Trigger: AAATAATAAAATGAGTTTGCAGCCTGCATGTGATGC...TGGCTGGTTTAATAATGAGCATTTCCACCCAGTGAGGGAAGAGAGGAAGACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp GTCTTCCTCTCTTCCCTCACTGGGTGGAAATGCTCATTATTAAACCAGCCACAGCCAATGTTACATAAATaGAATCCTGCTACATGTATG +
Preference number: 4 (lower is better)
Translates to: VFLSSLTGWKCSLLNQPQPMLHK*NPATCM
Trigger: CATACATGTAGCAGGATTCCATTTATGTAACATTGG...CTGTGGCTGGTTTAATAATGAGCATTTCCACCCAGTGAGGGAAGAGAGGAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR TCA 90 bp TGGTACAGTCTACAGAACATACTCAGTTTCCCCAGTTACATCTGTACTCCTTTGGTGTACAGCAGTTACTaGAAATGGCACTATATCACA +
Preference number: 4 (lower is better)
Translates to: WYSLQNILSFPSYICTPLVYSSY*KWHYIT
Trigger: TGTGATATAGTGCCATTTTCAGTAACTGCTGTACAC...CAAAGGAGTACAGATGTAACTGGGGAAACTGAGTATGTTCTGTAGACTGTACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
CDS-3UTR GCA 90 bp CATTGGTACAGTCTACAGAACATACTCAGTTTCCCCAGTTACATCTGTACTCCTAAAAGATATTCAACTTaGTGCCTGTGTCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: HWYSLQNILSFPSYICTPKRYST*CLCPGR
Trigger: TCTTCCTGGACACAGGCAGCAAGTTGAATATCTTTT...AGGAGTACAGATGTAACTGGGGAAACTGAGTATGTTCTGTAGACTGTACCAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR GCA 90 bp AGATTGGCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTATCCCAGGCATCACATaGAGGCTGCAAACTCATTTT +
Preference number: 4 (lower is better)
Translates to: RLAVFALKNFLEFHLSCCIPGIT*RLQTHF
Trigger: AAAATGAGTTTGCAGCCTGCATGTGATGCCTGGGAT...ACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGCCAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CCA 90 bp CATTGGTACAGTCTACAGAACATACTCAGTTTCCCCAGTTACATCTGTACTCCTTCTTCCCTCACTGGGTaGAAATGCTCATTATTAAAC +
Preference number: 4 (lower is better)
Translates to: HWYSLQNILSFPSYICTPSSLTG*KCSLLN
Trigger: GTTTAATAATGAGCATTTCCACCCAGTGAGGGAAGA...AGGAGTACAGATGTAACTGGGGAAACTGAGTATGTTCTGTAGACTGTACCAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR TCA 90 bp CATTGGTACAGTCTACAGAACATACTCAGTTTCCCCAGTTACATCTGTACTCCTACAACAGAAACTCTTTaGAGACAACTTGTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: HWYSLQNILSFPSYICTPTTETL*RQLVCF
Trigger: GAAACAGACAAGTTGTCTTCAAAGAGTTTCTGTTGT...AGGAGTACAGATGTAACTGGGGAAACTGAGTATGTTCTGTAGACTGTACCAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR TCA 90 bp AGATTGGCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTTGGCTGTTTTTGCTCTaGAGAATTTCCTTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: RLAVFALKNFLEFHLSCCWLFLL*RISLSF
Trigger: GAAACTCAAGGAAATTCTTCAGAGCAAAAACAGCCA...ACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGCCAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
CDS-3UTR CCA 90 bp TACTCAGTTTCCCCAGTTACATCTGTACTCCTTTGTGTACCTAACTCTACACAACCAATGTTACATAAATaGAATCCTGCTACATGTATG +
Preference number: 4 (lower is better)
Translates to: YSVSPVTSVLLCVPNSTQPMLHK*NPATCM
Trigger: CATACATGTAGCAGGATTCCATTTATGTAACATTGG...TTGTGTAGAGTTAGGTACACAAAGGAGTACAGATGTAACTGGGGAAACTGAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
3UTR CAA 72 bp ATGTCTGTCTTTTACCCAAACTACAACAGAAACTCTTaGAAGACAACTTGTCTGTTTCAAAACTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: MSVFYPNYNRNS*KTTCLFQNCGL
Trigger: AAGACCACAGTTTTGAAACAGACAAGTTGTCTTCAAAGAGTTTCTGTTGTAGTTTGGGTAAAAGACAGACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399562.9
3UTR CAA 72 bp CATAAATGGAATCCTGCTACATGTATGTTTTCAAGATaGGCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: HKWNPATCMFSR*AVFALKNFLEF
Trigger: AAACTCAAGGAAATTCTTCAGAGCAAAAACAGCCAATCTTGAAAACATACATGTAGCAGGATTCCATTTATG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
CDS CCA 90 bp ATTGCTGGGCCTCGGCGTTCCGGCGCTCCTCCCAGTCGCGGCAGCTaGCCAGGTCGCGCTGCCACTGTTCGCAGGCCGGCCGCTCGCCGT +
Preference number: 5 (lower is better)
Translates to: IAGPRRSGAPPSRGS*PGRAATVRRPAARR
Trigger: ACGGCGAGCGGCCGGCCTGCGAACAGTGGCAGCGCGACCTGGCCAGCTGCCGCGACTGGGAGGAGCGCCGGAACGCCGAGGCCCAGCAAT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS GCA 90 bp GCCGCTCGCCGTGGACGTAGTAGTGGTGTAGGAAGTGCCTGGCGCTaGGGCAGAGCTTCCACTCGGCGCGGTAGGCCTCGCAGGGGCGCG +
Preference number: 5 (lower is better)
Translates to: AARRGRSSGVGSAWR*GRASTRRGRPRRGA
Trigger: CGCGCCCCTGCGAGGCCTACCGCGCCGAGTGGAAGCTCTGCCGCAGCGCCAGGCACTTCCTACACCACTACTACGTCCACGGCGAGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399562.9
ENST00000399568.5
ENST00000509549.5
CDS GCA 90 bp CCTCGGGGCCCACACCAGGATGTGCTTCCGTGCAGCCCGGACTCGTaGCCGCTCGCTCTCACAGAGGGATTGCTGGGCCTCGGCGTTCCG +
Preference number: 5 (lower is better)
Translates to: PRGPHQDVLPCSPDS*PLALTEGLLGLGVP
Trigger: CGGAACGCCGAGGCCCAGCAATCCCTCTGTGAGAGCGAGCGGGCACGAGTCCGGGCTGCACGGAAGCACATCCTGGTGTGGGCCCCGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS CCA 90 bp AGGCCGGCCGCTCGCCGTGGACGTAGTAGTGGTGTAGGAAGTGCCTaGCGCTGCGGCAGAGCTTCCACTCGGCGCGGTAGGCCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: RPAARRGRSSGVGSA*RCGRASTRRGRPRR
Trigger: CCTGCGAGGCCTACCGCGCCGAGTGGAAGCTCTGCCGCAGCGCCAGGCACTTCCTACACCACTACTACGTCCACGGCGAGCGGCCGGCCT
70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399562.9
ENST00000399568.5
ENST00000509549.5
CDS-3UTR CAA 90 bp AGGAGGTTGCATAGGAGGTTGTCTAGGGAGGTCCTGGGTACCCTTGCCCCAGCCGCTCTCACAGAGGGATaGCTGGGCCTCGGCGTTCCG +
Preference number: 5 (lower is better)
Translates to: RRLHRRLSREVLGTLAPAALTEG*LGLGVP
Trigger: CGGAACGCCGAGGCCCAGCAATCCCTCTGTGAGAGC...GGCTGGGGCAAGGGTACCCAGGACCTCCCTAGACAACCTCCTATGCAACCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CAA 90 bp ACGTCACAGCTGCCCGCAGCAGTGAGGATCCGGCTGGTGAGTACCGTCTCCCACGCCAGTGAGTCCTGCTaGTCAGAAACCAGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: TSQLPAAVRIRLVSTVSHASESC*SETRFL
Trigger: CAGGAACCTGGTTTCTGACAAGCAGGACTCACTGGC...GTGGGAGACGGTACTCACCAGCCGGATCCTCACTGCTGCGGGCAGCTGTGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509549.5
CDS-3UTR CAA 90 bp AGGAGGTTGCATAGGAGGTTGTCTAGGGAGGTCCTGGGTACCCTTGCCCCAGCCCAATGGCAGGGATGCTaGTCACTCGTCCTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: RRLHRRLSREVLGTLAPAQWQGC*SLVLLL
Trigger: CAGGAGAAGGACGAGTGACAAGCATCCCTGCCATTG...GGCTGGGGCAAGGGTACCCAGGACCTCCCTAGACAACCTCCTATGCAACCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS TCA 90 bp CTGGTCACAGTCCCCAGGGCTGTGCAACAGCAACTTGAAACAGACTaGGGAAGCTGCACAGGCCAATGGCAGGGATGCTTGTCACTCGTC +
Preference number: 5 (lower is better)
Translates to: LVTVPRAVQQQLETD*GSCTGQWQGCLSLV
Trigger: GACGAGTGACAAGCATCCCTGCCATTGGCCTGTGCAGCTTCCTCAGTCTGTTTCAAGTTGCTGTTGCACAGCCCTGGGGACTGTGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CAA 90 bp AAATGCTCATTATTAAACCAGCCACAGCCATGCTGGAGGCACCCTGGTTGCCTTAGGTCCTGGGTACCCTaGCCCCAGCCTCCCCCAATG +
Preference number: 5 (lower is better)
Translates to: KCSLLNQPQPCWRHPGCLRSWVP*PQPPPM
Trigger: CATTGGGGGAGGCTGGGGCAAGGGTACCCAGGACCT...AAGGCAACCAGGGTGCCTCCAGCATGGCTGTGGCTGGTTTAATAATGAGCATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CAA 90 bp GCAGTCTTCCTCTCTTCCCTCACTGGGTGGAAATGCTCATTATTAAACCAGCCAGGCATGCCCTGGCTTTaGCTGCACTCTCCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: AVFLSSLTGWKCSLLNQPGMPWL*LHSPAL
Trigger: CAGAGCTGGAGAGTGCAGCAAAAGCCAGGGCATGCC...TGGCTGGTTTAATAATGAGCATTTCCACCCAGTGAGGGAAGAGAGGAAGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CAA 90 bp CATTTCTTAAAAACCAGAGTCTCCAGGGGCCGACCTGGGAGCCTAAGAAGTGAAGGGGTTTCAACCATGTaGGCCAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: HFLKTRVSRGRPGSLRSEGVSTM*ARLVSN
Trigger: GTTTGAGACCAGCCTGGCCAACATGGTTGAAACCCC...TTCACTTCTTAGGCTCCCAGGTCGGCCCCTGGAGACTCTGGTTTTTAAGAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CAA 90 bp TGGTACAGTCTACAGAACATACTCAGTTTCCCCAGTTACATCTGTACTCCTTTGAGGTCCTGGGTACCCTaGCCCCAGCCTCCCCCAATG +
Preference number: 5 (lower is better)
Translates to: WYSLQNILSFPSYICTPLRSWVP*PQPPPM
Trigger: CATTGGGGGAGGCTGGGGCAAGGGTACCCAGGACCT...CAAAGGAGTACAGATGTAACTGGGGAAACTGAGTATGTTCTGTAGACTGTACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
CDS-3UTR CAA 90 bp ACCTGCCATAATGCTTGGCCTCCTGGAAGCTCTAAAGCGGTGCAATTGTCCTGCCCACCAGGGGAAATTTaGAGGGAAGGAGTGCTTAAT +
Preference number: 5 (lower is better)
Translates to: TCHNAWPPGSSKAVQLSCPPGEI*REGVLN
Trigger: ATTAAGCACTCCTTCCCTCAAAATTTCCCCTGGTGG...GCAGGACAATTGCACCGCTTTAGAGCTTCCAGGAGGCCAAGCATTATGGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CAA 90 bp TGCTCGGCACACCTGCCTGCATGTGCAGTGGAACTGAGCGAGTGGAGCAGAGTGTGTATGTTTTCAAGATaGGCTGTTTTTGCTCTGAAG +
Preference number: 5 (lower is better)
Translates to: CSAHLPACAVELSEWSRVCMFSR*AVFALK
Trigger: CTTCAGAGCAAAAACAGCCAATCTTGAAAACATACA...CACTCTGCTCCACTCGCTCAGTTCCACTGCACATGCAGGCAGGTGTGCCGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CAA 90 bp GCAGTCTTCCTCTCTTCCCTCACTGGGTGGAAATGCTCATTATTAAACCAGCCACGCACAATGCATACCTaGCTAAACAAGCAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: AVFLSSLTGWKCSLLNQPRTMHT*LNKQVA
Trigger: TGCCACCTGCTTGTTTAGCAAGGTATGCATTGTGCG...TGGCTGGTTTAATAATGAGCATTTCCACCCAGTGAGGGAAGAGAGGAAGACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CAA 90 bp AGATTGGCTGTTTTTGCTCTGAAGAATTTCCTTGAGTTTCATCTGAGTTGCTGTTCTAAAGCGGTGCAATaGTCCTGCAGAACATCGCAG +
Preference number: 5 (lower is better)
Translates to: RLAVFALKNFLEFHLSCCSKAVQ*SCRTSQ
Trigger: CTGCGATGTTCTGCAGGACAATTGCACCGCTTTAGA...ACAGCAACTCAGATGAAACTCAAGGAAATTCTTCAGAGCAAAAACAGCCAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS CCA 90 bp CTACAACAGAAACTCTTTGAAGACAACTTGTCTGTTTCAAAACTGTaGTCTTATAAGCCTCAAACCCTGTCCAACATGTGGACACTCAGA +
Preference number: 5 (lower is better)
Translates to: LQQKLFEDNLSVSKL*SYKPQTLSNMWTLR
Trigger: TCTGAGTGTCCACATGTTGGACAGGGTTTGAGGCTTATAAGACCACAGTTTTGAAACAGACAAGTTGTCTTCAAAGAGTTTCTGTTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CAA 90 bp ACAACTTGTCTGTTTCAAAACTGTGGTCTTATAAGCCTCAAACCCTGTCCAACATTAATTCCATATGTCTaGGACTTGGATTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: TTCLFQNCGLISLKPCPTLIPYV*DLDFFS
Trigger: GCTGAAGAAATCCAAGTCCAAGACATATGGAATTAA...TGTTGGACAGGGTTTGAGGCTTATAAGACCACAGTTTTGAAACAGACAAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS-3UTR CAA 90 bp GTTTCATCTGAGTTGCTGTGTGTACAGCAGTTACTGAAAATGGCACTATATCACTGTATGTTTTCAAGATaGGCTGTTTTTGCTCTGAAG +
Preference number: 5 (lower is better)
Translates to: VSSELLCVQQLLKMALYHCMFSR*AVFALK
Trigger: CTTCAGAGCAAAAACAGCCAATCTTGAAAACATACA...GTGATATAGTGCCATTTTCAGTAACTGCTGTACACACAGCAACTCAGATGAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399562.9
ENST00000399568.5
CDS GCA 72 bp GGTAGGCCTCGCAGGGGCGCGGCGGCTGCCAGCCGCTaGCGTCCGCCATGTCTGGGCGACCGGCGCGCCAAG +
Preference number: 6 (lower is better)
Translates to: GRPRRGAAAASR*RPPCLGDRRAK
Trigger: CTTGGCGCGCCGGTCGCCCAGACATGGCGGACGGCAGCGGCTGGCAGCCGCCGCGCCCCTGCGAGGCCTACC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS GCA 72 bp CGCTCCTCCCAGTCGCGGCAGCTGGCCAGGTCGCGCTaGCACTGTTCGCAGGCCGGCCGCTCGCCGTGGACG +
Preference number: 6 (lower is better)
Translates to: RSSQSRQLARSR*HCSQAGRSPWT
Trigger: CGTCCACGGCGAGCGGCCGGCCTGCGAACAGTGGCAGCGCGACCTGGCCAGCTGCCGCGACTGGGAGGAGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399562.9
ENST00000399568.5
ENST00000509549.5
CDS CCA 72 bp CCTCGGCGTTCCGGCGCTCCTCCCAGTCGCGGCAGCTaGCCAGGTCGCGCTGCCACTGTTCGCAGGCCGGCC +
Preference number: 6 (lower is better)
Translates to: PRRSGAPPSRGS*PGRAATVRRPA
Trigger: GGCCGGCCTGCGAACAGTGGCAGCGCGACCTGGCCAGCTGCCGCGACTGGGAGGAGCGCCGGAACGCCGAGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399562.9
ENST00000399568.5
ENST00000509549.5
CDS GCA 72 bp CCACACCAGGATGTGCTTCCGTGCAGCCCGGACTCGTaGCCGCTCGCTCTCACAGAGGGATTGCTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: PHQDVLPCSPDS*PLALTEGLLGL
Trigger: GAGGCCCAGCAATCCCTCTGTGAGAGCGAGCGGGCACGAGTCCGGGCTGCACGGAAGCACATCCTGGTGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399562.9
CDS CCA 72 bp GCTCGCCGTGGACGTAGTAGTGGTGTAGGAAGTGCCTaGCGCTGCGGCAGAGCTTCCACTCGGCGCGGTAGG +
Preference number: 6 (lower is better)
Translates to: ARRGRSSGVGSA*RCGRASTRRGR
Trigger: CCTACCGCGCCGAGTGGAAGCTCTGCCGCAGCGCCAGGCACTTCCTACACCACTACTACGTCCACGGCGAGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399562.9
ENST00000399568.5
ENST00000509549.5
CDS TCA 72 bp AGTTGCGAACTTGGTCCCGTCAGGGTGAATATCAACTaGAAAAATCGGCTTGCCTGGGCCTCGGCGTTCCGG +
Preference number: 6 (lower is better)
Translates to: SCELGPVRVNIN*KNRLAWASAFR
Trigger: CCGGAACGCCGAGGCCCAGGCAAGCCGATTTTTTCAGTTGATATTCACCCTGACGGGACCAAGTTCGCAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509549.5