RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C22ORF23 (Homo sapiens)

Ensembl gene IDs: ENSG00000128346

Ensembl transcript IDs: ENST00000249079.6, ENST00000403026.5, ENST00000403305.6, ENST00000418863.5, ENST00000422191.1, ENST00000619227.4

Found 383 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACATaGAGGGATTGGAACTCCCAGGCCAGGGCTCTAGGTCGCTCCCAC +
Preference number: 1 (lower is better)
Translates to: STELVGFAQERSRGT*RDWNSQARALGRSH
Trigger: GTGGGAGCGACCTAGAGCCCTGGCCTGGGAGTTCCAATCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR GCA 90 bp GCAGGGATCGTGGGTGTCAGGAGCCAGAGGGGAGGGGGACAGATGTaGTGTGTACAGGACAAGGTGTCAGGTGACTCCTTCCCAGCAGGG +
Preference number: 1 (lower is better)
Translates to: AGIVGVRSQRGGGQM*CVQDKVSGDSFPAG
Trigger: CCCTGCTGGGAAGGAGTCACCTGACACCTTGTCCTGTACACAGCACATCTGTCCCCCTCCCCTCTGGCTCCTGACACCCACGATCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR TCA 90 bp GAGGGGAGGGGGACAGATGTGCTGTGTACAGGACAAGGTGTCAGGTaGCTCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCT +
Preference number: 1 (lower is better)
Translates to: EGRGTDVLCTGQGVR*LLPSRASQMHKHGA
Trigger: AGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGAGTCACCTGACACCTTGTCCTGTACACAGCACATCTGTCCCCCTCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR GCA 90 bp CCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGTGGGTTTTaGCCAAGAAAGGTCACGCGGCACATGCAGGGATTGGAACTCCCA +
Preference number: 1 (lower is better)
Translates to: PSRASQMHKHGAGGF*PRKVTRHMQGLELP
Trigger: TGGGAGTTCCAATCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR GCA 90 bp CAGGACAAGGTGTCAGGTGACTCCTTCCCAGCAGGGCCTCGCAGATaGACAAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGC +
Preference number: 1 (lower is better)
Translates to: QDKVSGDSFPAGPRR*TSTELVGFAQERSR
Trigger: GCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGAGTCACCTGACACCTTGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR CCA 90 bp ACTCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGTaGGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGATTGGA +
Preference number: 1 (lower is better)
Translates to: TPSQQGLADAQARSW*VLPKKGHAAHAGIG
Trigger: TCCAATCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR CCA 90 bp GTGACTCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTaGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGATT +
Preference number: 1 (lower is better)
Translates to: VTPSQQGLADAQARS*WVLPKKGHAAHAGI
Trigger: AATCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR CCA 90 bp CTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGATTaGAACTCCCAGGCCAGGGCTCTAGGTCGCTCCCACCTTTTCATG +
Preference number: 1 (lower is better)
Translates to: LVGFAQERSRGTCRD*NSQARALGRSHLFM
Trigger: CATGAAAAGGTGGGAGCGACCTAGAGCCCTGGCCTGGGAGTTCCAATCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR GCA 90 bp CCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTaGGGACGGGGCTGTGAGTCTCAGAGGCTCCATCTGCATTCCGGG +
Preference number: 1 (lower is better)
Translates to: PLDTCPSRDARALLL*GRGCESQRLHLHSG
Trigger: CCCGGAATGCAGATGGAGCCTCTGAGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR CCA 90 bp ATCATTAACAGAGTGGAATTCAGCACCCGCCACAGCAGCCAGCCATaGGGTGCCCAAGAGGTTGGTTCCCGTTGCCACTTGAAATATGCA +
Preference number: 1 (lower is better)
Translates to: IINRVEFSTRHSSQP*GAQEVGSRCHLKYA
Trigger: TGCATATTTCAAGTGGCAACGGGAACCAACCTCTTGGGCACCCCATGGCTGGCTGCTGTGGCGGGTGCTGAATTCCACTCTGTTAATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR CCA 90 bp GGGATAATGAACCGTTGCAGAGGTTTATTGAGATCATTAACAGAGTaGAATTCAGCACCCGCCACAGCAGCCAGCCATGGGGTGCCCAAG +
Preference number: 1 (lower is better)
Translates to: GIMNRCRGLLRSLTE*NSAPATAASHGVPK
Trigger: CTTGGGCACCCCATGGCTGGCTGCTGTGGCGGGTGCTGAATTCCACTCTGTTAATGATCTCAATAAACCTCTGCAACGGTTCATTATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR GCA 90 bp GCCATGGGGTGCCCAAGAGGTTGGTTCCCGTTGCCACTTGAAATATaGAAACAGGTAGCTAGAAACCATCTGGGCTTGACAAAGTCTAAT +
Preference number: 1 (lower is better)
Translates to: AMGCPRGWFPLPLEI*KQVARNHLGLTKSN
Trigger: ATTAGACTTTGTCAAGCCCAGATGGTTTCTAGCTACCTGTTTGCATATTTCAAGTGGCAACGGGAACCAACCTCTTGGGCACCCCATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR GCA 90 bp GGTATCTTGTTGAGACTTAGTTTTCACAGAGGGATAATGAACCGTTaGAGAGGTTTATTGAGATCATTAACAGAGTGGAATTCAGCACCC +
Preference number: 1 (lower is better)
Translates to: GILLRLSFHRGIMNR*RGLLRSLTEWNSAP
Trigger: GGGTGCTGAATTCCACTCTGTTAATGATCTCAATAAACCTCTGCAACGGTTCATTATCCCTCTGTGAAAACTAAGTCTCAACAAGATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR GCA 90 bp AAAGACATAAAGCTAAAGCCAACTTTTAATCCTGAATGCACTGCTTaGCAGGTAAATGCCCTTGGTTGTGGTATCTTGTTGAGACTTAGT +
Preference number: 1 (lower is better)
Translates to: KDIKLKPTFNPECTA*QVNALGCGILLRLS
Trigger: ACTAAGTCTCAACAAGATACCACAACCAAGGGCATTTACCTGGCAAGCAGTGCATTCAGGATTAAAAGTTGGCTTTAGCTTTATGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR GCA 90 bp TCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGTGGGTTTTGCCCAAGCAGCCAGCCATGGGGTaGCCAAGAGGTTGGTTCCCG +
Preference number: 2 (lower is better)
Translates to: SQQGLADAQARSWWVLPKQPAMG*PRGWFP
Trigger: CGGGAACCAACCTCTTGGGCACCCCATGGCTGGCTG...CTTGGGCAAAACCCACCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CCA 90 bp AGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGAGTCTCAGAGGGCTGGTAGGATGGGCTaGCCTGAGGATGGCCCTGCC +
Preference number: 2 (lower is better)
Translates to: SRDARALLLCGRGCESQRAGRMG*PEDGPA
Trigger: GGCAGGGCCATCCTCAGGCCAGCCCATCCTACCAGC...CCTCTGAGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CCA 90 bp AAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGAGCTGGTAGGATGGGCTaGCCTGAGGATGGCCCTGCC +
Preference number: 2 (lower is better)
Translates to: KHGAGGFCPRKVTRHMQGAGRMG*PEDGPA
Trigger: GGCAGGGCCATCCTCAGGCCAGCCCATCCTACCAGC...TCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CCA 90 bp TCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGTGGGTTTTGCCCAAGAGAAGGCTGGTAGGATaGGCTGGCCTGAGGATGGCC +
Preference number: 2 (lower is better)
Translates to: SQQGLADAQARSWWVLPKRRLVG*AGLRMA
Trigger: GGCCATCCTCAGGCCAGCCCATCCTACCAGCCTTCT...CTTGGGCAAAACCCACCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CCA 90 bp TGTCAGGTGACTCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGGGCACATGCAGGGATTaGAACTCCCAGGCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: CQVTPSQQGLADAQARSWGTCRD*NSQARA
Trigger: AGCCCTGGCCTGGGAGTTCCAATCCCTGCATGTGCC...CCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGAGTCACCTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR CAA 90 bp TCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGTGGGTTTaGCCCAAGAAAGGTCACGCGGCACATGCAGGGATTGGAACTCCC +
Preference number: 2 (lower is better)
Translates to: SQQGLADAQARSWWV*PKKGHAAHAGIGTP
Trigger: GGGAGTTCCAATCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR TCA 90 bp GACAAGGTGTCAGGTGACTCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGCAGGGGCTAGGCTGCTaGGTATGCCTTGGGGTACTG +
Preference number: 2 (lower is better)
Translates to: DKVSGDSFPAGPRRCTSTQGLGC*VCLGVL
Trigger: CAGTACCCCAAGGCATACTCAGCAGCCTAGCCCCTG...CGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGAGTCACCTGACACCTTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR GCA 90 bp AGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGAGTCTCAGAGGTGCAGGGCAGTGCTATaGCACCACCTGACGTGGCAG +
Preference number: 2 (lower is better)
Translates to: SRDARALLLCGRGCESQRCRAVL*HHLTWQ
Trigger: CTGCCACGTCAGGTGGTGGCATAGCACTGCCCTGCA...CCTCTGAGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CCA 90 bp TCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGTGGGTTTTGCCAGGAGTGGACTCCAGTaGTCGAGCTTGGGCTACCCT +
Preference number: 2 (lower is better)
Translates to: SFPAGPRRCTSTELVGFARSGLQ*SSLGYP
Trigger: AGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCT...GGCAAAACCCACCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CCA 90 bp AACAGAGTGGAATTCAGCACCCGCCACAGCAGCCAGCCATGGGGTGCCCAAGAGAGAAGGCTGGTAGGATaGGCTGGCCTGAGGATGGCC +
Preference number: 2 (lower is better)
Translates to: NRVEFSTRHSSQPWGAQERRLVG*AGLRMA
Trigger: GGCCATCCTCAGGCCAGCCCATCCTACCAGCCTTCT...CTCTTGGGCACCCCATGGCTGGCTGCTGTGGCGGGTGCTGAATTCCACTCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CCA 90 bp TCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGTGGGTTTTGCCCTGCTGAGTATGCCTTaGGGTACTGCAGGGCAGTGC +
Preference number: 2 (lower is better)
Translates to: SFPAGPRRCTSTELVGFALLSMP*GTAGQC
Trigger: GCACTGCCCTGCAGTACCCCAAGGCATACTCAGCAG...GGCAAAACCCACCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CCA 90 bp TGTCAGGTGACTCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGCTGCTGAGTATGCCTTaGGGTACTGCAGGGCAGTGC +
Preference number: 2 (lower is better)
Translates to: CQVTPSQQGLADAQARSWLLSMP*GTAGQC
Trigger: GCACTGCCCTGCAGTACCCCAAGGCATACTCAGCAG...CCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGAGTCACCTGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR GCA 90 bp GGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGATTGGAACTCCCAGGCCCTCAGAGGCTCCATCTaGATTCCGGGGCAGGGGCTA +
Preference number: 2 (lower is better)
Translates to: GFAQERSRGTCRDWNSQALRGSI*IPGQGL
Trigger: TAGCCCCTGCCCCGGAATGCAGATGGAGCCTCTGAG...GGCCTGGGAGTTCCAATCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR GCA 90 bp CAGATGCACAAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACCGGGCTTTGCTTCTCTaGGGACGGGGCTGTGAGTCT +
Preference number: 2 (lower is better)
Translates to: QMHKHGAGGFCPRKVTRHRALLL*GRGCES
Trigger: AGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCG...GTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTTGTGCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CCA 90 bp AGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGAGTCTCAGAGGTGCCTGGCAGAGGAGTaGACTCCAGTGGTCGAGCTT +
Preference number: 2 (lower is better)
Translates to: SRDARALLLCGRGCESQRCLAEE*TPVVEL
Trigger: AAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCA...CCTCTGAGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR CAA 90 bp GCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGATaGGAACTCCCAGGCCAGGGCTCTAGGTCGCTCCCACCTTTTCAT +
Preference number: 2 (lower is better)
Translates to: AGGFCPRKVTRHMQG*ELPGQGSRSLPPFH
Trigger: ATGAAAAGGTGGGAGCGACCTAGAGCCCTGGCCTGGGAGTTCCAATCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR TCA 90 bp ACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGTGCTATGCCACCACCTaGCGTGGCAGAAGGCTGGTA +
Preference number: 2 (lower is better)
Translates to: THVLVGMLGLCFSADGAVCYATT*RGRRLV
Trigger: TACCAGCCTTCTGCCACGTCAGGTGGTGGCATAGCA...CACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CCA 90 bp ACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGAGGAGTGGACTCCAGTaGTCGAGCTTGGGCTACCCT +
Preference number: 2 (lower is better)
Translates to: THVLVGMLGLCFSADGAVRSGLQ*SSLGYP
Trigger: AGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCT...CACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR GCA 90 bp GACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTTATGCCTTGGGGTACTaGAGGGCAGTGCTATGCCAC +
Preference number: 2 (lower is better)
Translates to: DTCPSRDARALLLCGRGCYALGY*RAVLCH
Trigger: GTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATA...ACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CCA 90 bp GGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGATTGGAACTCCCAGGCCACAGGTCAGAAGTGGTaGGAAGCAGGCCCAGTGGAT +
Preference number: 2 (lower is better)
Translates to: GFAQERSRGTCRDWNSQATGQKW*EAGPVD
Trigger: ATCCACTGGGCCTGCTTCCCACCACTTCTGACCTGT...GGCCTGGGAGTTCCAATCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CCA 90 bp AAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGAGGGTGCCCAAGAGGTTaGTTCCCGTTGCCACTTGAA +
Preference number: 2 (lower is better)
Translates to: KHGAGGFCPRKVTRHMQGGCPRG*FPLPLE
Trigger: TTCAAGTGGCAACGGGAACCAACCTCTTGGGCACCC...TCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CCA 90 bp CAGGTCAGAAGTGGTGGGAAGCAGGCCCAGTGGATACCTTTAGACACATGTCCTAGAAGGCTGGTAGGATaGGCTGGCCTGAGGATGGCC +
Preference number: 2 (lower is better)
Translates to: QVRSGGKQAQWIPLDTCPRRLVG*AGLRMA
Trigger: GGCCATCCTCAGGCCAGCCCATCCTACCAGCCTTCT...AGGACATGTGTCTAAAGGTATCCACTGGGCCTGCTTCCCACCACTTCTGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR CAA 90 bp CAGTGGATACCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTaGCTTCTCTGCGGACGGGGCTGTGAGTCTCAGAGGCTCCATCTG +
Preference number: 2 (lower is better)
Translates to: QWIPLDTCPSRDARA*LLCGRGCESQRLHL
Trigger: CAGATGGAGCCTCTGAGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGGTATCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR TCA 90 bp AAACCGAAACTTGGGTCATGTGACCTGATGGGATTATGGGACTCCCTCCAGGTGCAGGGGCTAGGCTGCTaGGTATGCCTTGGGGTACTG +
Preference number: 2 (lower is better)
Translates to: KPKLGSCDLMGLWDSLQVQGLGC*VCLGVL
Trigger: CAGTACCCCAAGGCATACTCAGCAGCCTAGCCCCTG...CACCTGGAGGGAGTCCCATAATCCCATCAGGTCACATGACCCAAGTTTCGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR GCA 90 bp TGTCAGGTGACTCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGGAGGTTGGTTCCCGTTaGCACTTGAAATATGCAAAC +
Preference number: 2 (lower is better)
Translates to: CQVTPSQQGLADAQARSWEVGSR*HLKYAN
Trigger: GTTTGCATATTTCAAGTGGCAACGGGAACCAACCTC...CCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGAGTCACCTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CCA 90 bp AAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGAGGGAAGCAGGCCCAGTaGATACCTTTAGACACATGT +
Preference number: 2 (lower is better)
Translates to: KHGAGGFCPRKVTRHMQGGKQAQ*IPLDTC
Trigger: ACATGTGTCTAAAGGTATCCACTGGGCCTGCTTCCC...TCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR GCA 90 bp CAGTGGATACCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCAGGGCAGTGCTATaGCACCACCTGACGTGGCAG +
Preference number: 2 (lower is better)
Translates to: QWIPLDTCPSRDARALLLCRAVL*HHLTWQ
Trigger: CTGCCACGTCAGGTGGTGGCATAGCACTGCCCTGCA...GAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGGTATCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR GCA 90 bp GACAAGGTGTCAGGTGACTCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGGTTGGTTCCCGTTaGCACTTGAAATATGCAAAC +
Preference number: 2 (lower is better)
Translates to: DKVSGDSFPAGPRRCTSTEVGSR*HLKYAN
Trigger: GTTTGCATATTTCAAGTGGCAACGGGAACCAACCTC...CGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGAGTCACCTGACACCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CCA 90 bp CAGTGGATACCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTCCAGTGGTCGAGCTTaGGCTACCCTGCCCGTCTCT +
Preference number: 2 (lower is better)
Translates to: QWIPLDTCPSRDARALLLSSGRA*ATLPVS
Trigger: AGAGACGGGCAGGGTAGCCCAAGCTCGACCACTGGA...GAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGGTATCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR TCA 90 bp CGTTGCAGAGGTTTATTGAGATCATTAACAGAGTGGAATTCAGCACCCGCCACACTGCGGACGGGGCTGTaGGTCTCAGAGGCTCCATCT +
Preference number: 2 (lower is better)
Translates to: RCRGLLRSLTEWNSAPATLRTGL*VSEAPS
Trigger: AGATGGAGCCTCTGAGACTCACAGCCCCGTCCGCAG...TGTGGCGGGTGCTGAATTCCACTCTGTTAATGATCTCAATAAACCTCTGCAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR TCA 90 bp TCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGTGGGTTTTGCCGTTGTGGTATCTTGTTaGGACTTAGTTTTCACAGAG +
Preference number: 2 (lower is better)
Translates to: SFPAGPRRCTSTELVGFAVVVSC*DLVFTE
Trigger: CTCTGTGAAAACTAAGTCTCAACAAGATACCACAAC...GGCAAAACCCACCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR GCA 90 bp AAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGATGCTTGCCAGGTAAATaGCCTTGGTTGTGGTATCTT +
Preference number: 2 (lower is better)
Translates to: KHGAGGFCPRKVTRHMQGCLPGK*PWLWYL
Trigger: AAGATACCACAACCAAGGGCATTTACCTGGCAAGCA...TCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR GCA 90 bp CAGTGGATACCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTATGCCTTGGGGTACTaGAGGGCAGTGCTATGCCAC +
Preference number: 2 (lower is better)
Translates to: QWIPLDTCPSRDARALLLYALGY*RAVLCH
Trigger: GTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATA...GAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGGTATCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR GCA 90 bp TCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGTGGGTTTTGCCCAAGACTTTTAATCCTGAATaGACTGCTTGCCAGGTAAAT +
Preference number: 2 (lower is better)
Translates to: SQQGLADAQARSWWVLPKTFNPE*TACQVN
Trigger: ATTTACCTGGCAAGCAGTGCATTCAGGATTAAAAGT...CTTGGGCAAAACCCACCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CCA 90 bp CGTTGCAGAGGTTTATTGAGATCATTAACAGAGTGGAATTCAGCACCCGCCACATCCAGTGGTCGAGCTTaGGCTACCCTGCCCGTCTCT +
Preference number: 2 (lower is better)
Translates to: RCRGLLRSLTEWNSAPATSSGRA*ATLPVS
Trigger: AGAGACGGGCAGGGTAGCCCAAGCTCGACCACTGGA...TGTGGCGGGTGCTGAATTCCACTCTGTTAATGATCTCAATAAACCTCTGCAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR GCA 90 bp GACTCCCTCCAGGTGCCCGAGACAAGGTTGATATTTCCAAAATATTTTGGTGATCTCAGAGGCTCCATCTaGATTCCGGGGCAGGGGCTA +
Preference number: 2 (lower is better)
Translates to: DSLQVPETRLIFPKYFGDLRGSI*IPGQGL
Trigger: TAGCCCCTGCCCCGGAATGCAGATGGAGCCTCTGAG...ATCACCAAAATATTTTGGAAATATCAACCTTGTCTCGGGCACCTGGAGGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR GCA 90 bp GAAATATGCAAACAGGTAGCTAGAAACCATCTGGGCTTGACAAAGTCTAATGCCGGGATGCTCGGGCTTTaGTTCTCTGCGGACGGGGCT +
Preference number: 2 (lower is better)
Translates to: EICKQVARNHLGLTKSNAGMLGL*FSADGA
Trigger: AGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCC...GGCATTAGACTTTGTCAAGCCCAGATGGTTTCTAGCTACCTGTTTGCATATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CCA 90 bp CGTTGCAGAGGTTTATTGAGATCATTAACAGAGTGGAATTCAGCACCCGCCACATGCCTGGCAGAGGAGTaGACTCCAGTGGTCGAGCTT +
Preference number: 2 (lower is better)
Translates to: RCRGLLRSLTEWNSAPATCLAEE*TPVVEL
Trigger: AAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCA...TGTGGCGGGTGCTGAATTCCACTCTGTTAATGATCTCAATAAACCTCTGCAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR TCA 90 bp CAGATGCACAAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACCAAAGTCTAATGCCTTaGACAAATAAGCTTATCCCT +
Preference number: 2 (lower is better)
Translates to: QMHKHGAGGFCPRKVTRHQSLMP*TNKLIP
Trigger: AGGGATAAGCTTATTTGTTCAAGGCATTAGACTTTG...GTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTTGTGCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR TCA 90 bp AAACCGAAACTTGGGTCATGTGACCTGATGGGATTATGGGACTCCCTCCAGGTGGTTCCCGTTGCCACTTaGAATATGCAAACAGGTAGC +
Preference number: 2 (lower is better)
Translates to: KPKLGSCDLMGLWDSLQVVPVAT*NMQTGS
Trigger: GCTACCTGTTTGCATATTTCAAGTGGCAACGGGAAC...CACCTGGAGGGAGTCCCATAATCCCATCAGGTCACATGACCCAAGTTTCGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CCA 90 bp GAAATATGCAAACAGGTAGCTAGAAACCATCTGGGCTTGACAAAGTCTAATGCCTCCAGTGGTCGAGCTTaGGCTACCCTGCCCGTCTCT +
Preference number: 2 (lower is better)
Translates to: EICKQVARNHLGLTKSNASSGRA*ATLPVS
Trigger: AGAGACGGGCAGGGTAGCCCAAGCTCGACCACTGGA...GGCATTAGACTTTGTCAAGCCCAGATGGTTTCTAGCTACCTGTTTGCATATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CCA 90 bp TGGAACTCCCAGGCCAGGGCTCTAGGTCGCTCCCACCTTTTCATGTTTCTTTCTCCAGGTAAATGCCCTTaGTTGTGGTATCTTGTTGAG +
Preference number: 2 (lower is better)
Translates to: WNSQARALGRSHLFMFLSPGKCP*LWYLVE
Trigger: CTCAACAAGATACCACAACCAAGGGCATTTACCTGG...AGAAAGAAACATGAAAAGGTGGGAGCGACCTAGAGCCCTGGCCTGGGAGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR TCA 90 bp ATATGTTTTATTGGCCAGTTAATCATTGTGGTTGAATACTTGCCTAAGGCGGTACTGCGGACGGGGCTGTaGGTCTCAGAGGCTCCATCT +
Preference number: 2 (lower is better)
Translates to: ICFIGQLIIVVEYLPKAVLRTGL*VSEAPS
Trigger: AGATGGAGCCTCTGAGACTCACAGCCCCGTCCGCAG...TACCGCCTTAGGCAAGTATTCAACCACAATGATTAACTGGCCAATAAAACATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR GCA 90 bp GAAATATGCAAACAGGTAGCTAGAAACCATCTGGGCTTGACAAAGTCTAATGCCTATGCCTTGGGGTACTaGAGGGCAGTGCTATGCCAC +
Preference number: 2 (lower is better)
Translates to: EICKQVARNHLGLTKSNAYALGY*RAVLCH
Trigger: GTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATA...GGCATTAGACTTTGTCAAGCCCAGATGGTTTCTAGCTACCTGTTTGCATATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR GCA 90 bp ATATGTTTTATTGGCCAGTTAATCATTGTGGTTGAATACTTGCCTAAGGCGGTAGGGATGCTCGGGCTTTaGTTCTCTGCGGACGGGGCT +
Preference number: 2 (lower is better)
Translates to: ICFIGQLIIVVEYLPKAVGMLGL*FSADGA
Trigger: AGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCC...TACCGCCTTAGGCAAGTATTCAACCACAATGATTAACTGGCCAATAAAACATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR GCA 90 bp TGGAACTCCCAGGCCAGGGCTCTAGGTCGCTCCCACCTTTTCATGTTTCTTTCTGGGATAATGAACCGTTaGAGAGGTTTATTGAGATCA +
Preference number: 2 (lower is better)
Translates to: WNSQARALGRSHLFMFLSGIMNR*RGLLRS
Trigger: TGATCTCAATAAACCTCTGCAACGGTTCATTATCCC...AGAAAGAAACATGAAAAGGTGGGAGCGACCTAGAGCCCTGGCCTGGGAGTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR TCA 90 bp CGTTGCAGAGGTTTATTGAGATCATTAACAGAGTGGAATTCAGCACCCGCCACAGTTCCCGTTGCCACTTaGAATATGCAAACAGGTAGC +
Preference number: 2 (lower is better)
Translates to: RCRGLLRSLTEWNSAPATVPVAT*NMQTGS
Trigger: GCTACCTGTTTGCATATTTCAAGTGGCAACGGGAAC...TGTGGCGGGTGCTGAATTCCACTCTGTTAATGATCTCAATAAACCTCTGCAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR GCA 90 bp GATTGGAACTCCCAGGCCAGGGCTCTAGGTCGCTCCCACCTTTTCATGTTTCTTTTGCCACTTGAAATATaGAAACAGGTAGCTAGAAAC +
Preference number: 2 (lower is better)
Translates to: DWNSQARALGRSHLFMFLLPLEI*KQVARN
Trigger: GTTTCTAGCTACCTGTTTGCATATTTCAAGTGGCAA...AAGAAACATGAAAAGGTGGGAGCGACCTAGAGCCCTGGCCTGGGAGTTCCAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR CAA 90 bp AGACTTAGTTTTCACAGAGGGATAATGAACCGTTGCAGAGGTTTATaGAGATCATTAACAGAGTGGAATTCAGCACCCGCCACAGCAGCC +
Preference number: 2 (lower is better)
Translates to: RLSFHRGIMNRCRGL*RSLTEWNSAPATAA
Trigger: GGCTGCTGTGGCGGGTGCTGAATTCCACTCTGTTAATGATCTCAATAAACCTCTGCAACGGTTCATTATCCCTCTGTGAAAACTAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR CAA 90 bp GAATGCACTGCTTGCCAGGTAAATGCCCTTGGTTGTGGTATCTTGTaGAGACTTAGTTTTCACAGAGGGATAATGAACCGTTGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: ECTACQVNALGCGIL*RLSFHRGIMNRCRG
Trigger: ACCTCTGCAACGGTTCATTATCCCTCTGTGAAAACTAAGTCTCAACAAGATACCACAACCAAGGGCATTTACCTGGCAAGCAGTGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR CAA 90 bp CCTGAATGCACTGCTTGCCAGGTAAATGCCCTTGGTTGTGGTATCTaGTTGAGACTTAGTTTTCACAGAGGGATAATGAACCGTTGCAGA +
Preference number: 2 (lower is better)
Translates to: PECTACQVNALGCGI*LRLSFHRGIMNRCR
Trigger: TCTGCAACGGTTCATTATCCCTCTGTGAAAACTAAGTCTCAACAAGATACCACAACCAAGGGCATTTACCTGGCAAGCAGTGCATTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CCA 90 bp ATATGTTTTATTGGCCAGTTAATCATTGTGGTTGAATACTTGCCTAAGGCGGTATGCCACCACCTGACGTaGCAGAAGGCTGGTAGGATG +
Preference number: 2 (lower is better)
Translates to: ICFIGQLIIVVEYLPKAVCHHLT*QKAGRM
Trigger: CATCCTACCAGCCTTCTGCCACGTCAGGTGGTGGCA...TACCGCCTTAGGCAAGTATTCAACCACAATGATTAACTGGCCAATAAAACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR TCA 90 bp GACTCCCTCCAGGTGCCCGAGACAAGGTTGATATTTCCAAAATATTTTGGTGATATAAGCTTATCCCTCTaGAAACAAAATGGTGCTTGT +
Preference number: 2 (lower is better)
Translates to: DSLQVPETRLIFPKYFGDISLSL*KQNGAC
Trigger: ACAAGCACCATTTTGTTTTCAGAGGGATAAGCTTAT...ATCACCAAAATATTTTGGAAATATCAACCTTGTCTCGGGCACCTGGAGGGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR GCA 90 bp GACTCCCTCCAGGTGCCCGAGACAAGGTTGATATTTCCAAAATATTTTGGTGATTTGCCACTTGAAATATaGAAACAGGTAGCTAGAAAC +
Preference number: 2 (lower is better)
Translates to: DSLQVPETRLIFPKYFGDLPLEI*KQVARN
Trigger: GTTTCTAGCTACCTGTTTGCATATTTCAAGTGGCAA...ATCACCAAAATATTTTGGAAATATCAACCTTGTCTCGGGCACCTGGAGGGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR TCA 90 bp GAAATATGCAAACAGGTAGCTAGAAACCATCTGGGCTTGACAAAGTCTAATGCCATAAGCTTATCCCTCTaGAAACAAAATGGTGCTTGT +
Preference number: 2 (lower is better)
Translates to: EICKQVARNHLGLTKSNAISLSL*KQNGAC
Trigger: ACAAGCACCATTTTGTTTTCAGAGGGATAAGCTTAT...GGCATTAGACTTTGTCAAGCCCAGATGGTTTCTAGCTACCTGTTTGCATATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR CCA 72 bp CACCACCTGACGTGGCAGAAGGCTGGTAGGATGGGCTaGCCTGAGGATGGCCCTGCCTGGCAGAGGAGTGGA +
Preference number: 3 (lower is better)
Translates to: HHLTWQKAGRMG*PEDGPAWQRSG
Trigger: TCCACTCCTCTGCCAGGCAGGGCCATCCTCAGGCCAGCCCATCCTACCAGCCTTCTGCCACGTCAGGTGGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR TCA 72 bp GGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTaGGTCTCAGAGGCTCCATCTGCATTCCGGGGCAGG +
Preference number: 3 (lower is better)
Translates to: GCSGFASLRTGL*VSEAPSAFRGR
Trigger: CCTGCCCCGGAATGCAGATGGAGCCTCTGAGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CAA 90 bp AACAGAGTGGAATTCAGCACCCGCCACAGCAGCCAGCCATGGGGTGCCCAAGAGCTCCAGTGGTCGAGCTaGGGCTACCCTGCCCGTCTC +
Preference number: 3 (lower is better)
Translates to: NRVEFSTRHSSQPWGAQELQWSS*GYPARL
Trigger: GAGACGGGCAGGGTAGCCCAAGCTCGACCACTGGAG...CTCTTGGGCACCCCATGGCTGGCTGCTGTGGCGGGTGCTGAATTCCACTCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CAA 90 bp GCTGCTGAGTATGCCTTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGCTCCAGTGGTCGAGCTaGGGCTACCCTGCCCGTCTC +
Preference number: 3 (lower is better)
Translates to: AAEYALGYCRAVLCHHLTLQWSS*GYPARL
Trigger: GAGACGGGCAGGGTAGCCCAAGCTCGACCACTGGAG...CGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATACTCAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR CCA 72 bp TTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGATTaGAACTCCCAGGCCAGGGCTCTAGGTCGCTCCCAC +
Preference number: 3 (lower is better)
Translates to: FAQERSRGTCRD*NSQARALGRSH
Trigger: GTGGGAGCGACCTAGAGCCCTGGCCTGGGAGTTCCAATCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR CCA 72 bp CAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGTaGGTTTTGCCCAAGAAAGGTCACGCGGCACATGCA +
Preference number: 3 (lower is better)
Translates to: QQGLADAQARSW*VLPKKGHAAHA
Trigger: TGCATGTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CAA 90 bp ACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGGCTGCTGAGTATGCCTaGGGGTACTGCAGGGCAGTG +
Preference number: 3 (lower is better)
Translates to: THVLVGMLGLCFSADGAVAAEYA*GYCRAV
Trigger: CACTGCCCTGCAGTACCCCAAGGCATACTCAGCAGC...CACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CAA 90 bp AAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGAGCTGCTGAGTATGCCTaGGGGTACTGCAGGGCAGTG +
Preference number: 3 (lower is better)
Translates to: KHGAGGFCPRKVTRHMQGAAEYA*GYCRAV
Trigger: CACTGCCCTGCAGTACCCCAAGGCATACTCAGCAGC...TCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR GCA 72 bp GCTGAGTATGCCTTGGGGTACTGCAGGGCAGTGCTATaGCACCACCTGACGTGGCAGAAGGCTGGTAGGATG +
Preference number: 3 (lower is better)
Translates to: AEYALGYCRAVL*HHLTWQKAGRM
Trigger: CATCCTACCAGCCTTCTGCCACGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATACTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR GCA 72 bp CTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACATaGAGGGATTGGAACTCCCAGGCCAGGGCTCTAGGT +
Preference number: 3 (lower is better)
Translates to: LVGFAQERSRGT*RDWNSQARALG
Trigger: ACCTAGAGCCCTGGCCTGGGAGTTCCAATCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR GCA 72 bp GTGTCAGGTGACTCCTTCCCAGCAGGGCCTCGCAGATaGACAAGCACGGAGCTGGTGGGTTTTGCCCAAGAA +
Preference number: 3 (lower is better)
Translates to: VSGDSFPAGPRR*TSTELVGFAQE
Trigger: TTCTTGGGCAAAACCCACCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGAGTCACCTGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR GCA 72 bp ACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTaGGGACGGGGCTGTGAGTCTCAGAGGCTCCATCTG +
Preference number: 3 (lower is better)
Translates to: TCPSRDARALLL*GRGCESQRLHL
Trigger: CAGATGGAGCCTCTGAGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CAA 90 bp CAGGTCAGAAGTGGTGGGAAGCAGGCCCAGTGGATACCTTTAGACACATGTCCTGCTGCTGAGTATGCCTaGGGGTACTGCAGGGCAGTG +
Preference number: 3 (lower is better)
Translates to: QVRSGGKQAQWIPLDTCPAAEYA*GYCRAV
Trigger: CACTGCCCTGCAGTACCCCAAGGCATACTCAGCAGC...AGGACATGTGTCTAAAGGTATCCACTGGGCCTGCTTCCCACCACTTCTGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CAA 90 bp CAGATGCACAAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACAGAAACCATCTGGGCTaGACAAAGTCTAATGCCTTG +
Preference number: 3 (lower is better)
Translates to: QMHKHGAGGFCPRKVTRHRNHLG*TKSNAL
Trigger: CAAGGCATTAGACTTTGTCAAGCCCAGATGGTTTCT...GTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTTGTGCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CAA 90 bp AAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGACGTTGCAGAGGTTTATaGAGATCATTAACAGAGTGG +
Preference number: 3 (lower is better)
Translates to: KHGAGGFCPRKVTRHMQGRCRGL*RSLTEW
Trigger: CCACTCTGTTAATGATCTCAATAAACCTCTGCAACG...TCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CAA 90 bp GGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGATTGGAACTCCCAGGCCGGTTGTGGTATCTTGTaGAGACTTAGTTTTCACAGA +
Preference number: 3 (lower is better)
Translates to: GFAQERSRGTCRDWNSQAGCGIL*RLSFHR
Trigger: TCTGTGAAAACTAAGTCTCAACAAGATACCACAACC...GGCCTGGGAGTTCCAATCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR CCA 72 bp AACCGTTGCAGAGGTTTATTGAGATCATTAACAGAGTaGAATTCAGCACCCGCCACAGCAGCCAGCCATGGG +
Preference number: 3 (lower is better)
Translates to: NRCRGLLRSLTE*NSAPATAASHG
Trigger: CCCATGGCTGGCTGCTGTGGCGGGTGCTGAATTCCACTCTGTTAATGATCTCAATAAACCTCTGCAACGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR CCA 72 bp AAACCGAAACTTGGGTCATGTGACCTGATGGGATTATaGGACTCCCTCCAGGTGCCCGAGACAAGGTTGATA +
Preference number: 3 (lower is better)
Translates to: KPKLGSCDLMGL*DSLQVPETRLI
Trigger: TATCAACCTTGTCTCGGGCACCTGGAGGGAGTCCCATAATCCCATCAGGTCACATGACCCAAGTTTCGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CAA 90 bp GATTGGAACTCCCAGGCCAGGGCTCTAGGTCGCTCCCACCTTTTCATGTTTCTTAGGGATAATGAACCGTaGCAGAGGTTTATTGAGATC +
Preference number: 3 (lower is better)
Translates to: DWNSQARALGRSHLFMFLRDNEP*QRFIEI
Trigger: GATCTCAATAAACCTCTGCAACGGTTCATTATCCCT...AAGAAACATGAAAAGGTGGGAGCGACCTAGAGCCCTGGCCTGGGAGTTCCAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CAA 90 bp CGTTGCAGAGGTTTATTGAGATCATTAACAGAGTGGAATTCAGCACCCGCCACAAGAGGTTGGTTCCCGTaGCCACTTGAAATATGCAAA +
Preference number: 3 (lower is better)
Translates to: RCRGLLRSLTEWNSAPATRGWFP*PLEICK
Trigger: TTTGCATATTTCAAGTGGCAACGGGAACCAACCTCT...TGTGGCGGGTGCTGAATTCCACTCTGTTAATGATCTCAATAAACCTCTGCAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CAA 90 bp CGTTGCAGAGGTTTATTGAGATCATTAACAGAGTGGAATTCAGCACCCGCCACAATTGTGGTTGAATACTaGCCTAAGGCGGTAAGAAAT +
Preference number: 3 (lower is better)
Translates to: RCRGLLRSLTEWNSAPATIVVEY*PKAVRN
Trigger: ATTTCTTACCGCCTTAGGCAAGTATTCAACCACAAT...TGTGGCGGGTGCTGAATTCCACTCTGTTAATGATCTCAATAAACCTCTGCAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR GCA 72 bp AAGCTAAAGCCAACTTTTAATCCTGAATGCACTGCTTaGCAGGTAAATGCCCTTGGTTGTGGTATCTTGTTG +
Preference number: 3 (lower is better)
Translates to: KLKPTFNPECTA*QVNALGCGILL
Trigger: CAACAAGATACCACAACCAAGGGCATTTACCTGGCAAGCAGTGCATTCAGGATTAAAAGTTGGCTTTAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR GCA 72 bp AAAGACATAAAGCTAAAGCCAACTTTTAATCCTGAATaGACTGCTTGCCAGGTAAATGCCCTTGGTTGTGGT +
Preference number: 3 (lower is better)
Translates to: KDIKLKPTFNPE*TACQVNALGCG
Trigger: ACCACAACCAAGGGCATTTACCTGGCAAGCAGTGCATTCAGGATTAAAAGTTGGCTTTAGCTTTATGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR-3UTR CAA 90 bp GAAATATGCAAACAGGTAGCTAGAAACCATCTGGGCTTGACAAAGTCTAATGCCATTGTGGTTGAATACTaGCCTAAGGCGGTAAGAAAT +
Preference number: 3 (lower is better)
Translates to: EICKQVARNHLGLTKSNAIVVEY*PKAVRN
Trigger: ATTTCTTACCGCCTTAGGCAAGTATTCAACCACAAT...GGCATTAGACTTTGTCAAGCCCAGATGGTTTCTAGCTACCTGTTTGCATATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
3UTR GCA 72 bp TTGAGACTTAGTTTTCACAGAGGGATAATGAACCGTTaGAGAGGTTTATTGAGATCATTAACAGAGTGGAAT +
Preference number: 3 (lower is better)
Translates to: LRLSFHRGIMNR*RGLLRSLTEWN
Trigger: ATTCCACTCTGTTAATGATCTCAATAAACCTCTGCAACGGTTCATTATCCCTCTGTGAAAACTAAGTCTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CCCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGCGCGATCTGGGCTGCTaGAGCTGGCAGCTAGCGCCT +
Preference number: 4 (lower is better)
Translates to: PCLAEEWTPVVELGLPCPRDLGC*SWQLAP
Trigger: AGGCGCTAGCTGCCAGCTCCAGCAGCCCAGATCGCG...CGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249079.6
ENST00000403305.6
CDS-3UTR CCA 90 bp CCCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGGACGGGCTGCGAGGATaGGAGGCAGGTAGATGGGCG +
Preference number: 4 (lower is better)
Translates to: PCLAEEWTPVVELGLPCPDGLRG*EAGRWA
Trigger: CGCCCATCTACCTGCCTCCCATCCTCGCAGCCCGTC...CGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp CCCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGGGACAAGGTGTCAGGTaGCTCCTTCCCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PCLAEEWTPVVELGLPCPGQGVR*LLPSRA
Trigger: GGCCCTGCTGGGAAGGAGTCACCTGACACCTTGTCC...CGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGTCTGGGCTGCTGGAGCTaGCAGCTAGCGCCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: PAWQRSGLQWSSLGYPARLGCWS*QLAPLA
Trigger: AGCGAGAGGCGCTAGCTGCCAGCTCCAGCAGCCCAG...ACGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249079.6
ENST00000403305.6
CDS-3UTR TCA 90 bp CCCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGTGGTGGCTTGAGGCTTaGACTGCTCCCGGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: PCLAEEWTPVVELGLPCPWWLEA*TAPGCR
Trigger: CCTACAGCCGGGAGCAGTTCAAGCCTCAAGCCACCA...CGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp AGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGTCTCTGGAGACAGTTGGCAGGCCGGAGGTaGGGACGGGCTGCGAGGATG +
Preference number: 4 (lower is better)
Translates to: RSGLQWSSLGYPARLWRQLAGRR*GRAARM
Trigger: CATCCTCGCAGCCCGTCCCCACCTCCGGCCTGCCAA...CTGTCTCCAGAGACGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp CCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGTCTCAGAGGCTCCATCTaGATTCCGGGGCAGGGGCTA +
Preference number: 4 (lower is better)
Translates to: PAWQRSGLQWSSLGYPARLRGSI*IPGQGL
Trigger: TAGCCCCTGCCCCGGAATGCAGATGGAGCCTCTGAG...ACGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp AGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGAGTCTCAGAGGTTGGCAGGCCGGAGGTaGGGACGGGCTGCGAGGATG +
Preference number: 4 (lower is better)
Translates to: SRDARALLLCGRGCESQRLAGRR*GRAARM
Trigger: CATCCTCGCAGCCCGTCCCCACCTCCGGCCTGCCAA...CCTCTGAGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGTTCCAGTGGTCGAGCTTaGGCTACCCTGCCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: PAWQRSGLQWSSLGYPARSSGRA*ATLPVS
Trigger: AGAGACGGGCAGGGTAGCCCAAGCTCGACCACTGGA...ACGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CCCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGCTGCTGAGTATGCCTTaGGGTACTGCAGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: PCLAEEWTPVVELGLPCPLLSMP*GTAGQC
Trigger: GCACTGCCCTGCAGTACCCCAAGGCATACTCAGCAG...CGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGTGGCACATGCAGGGATTaGAACTCCCAGGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PAWQRSGLQWSSLGYPARGTCRD*NSQARA
Trigger: AGCCCTGGCCTGGGAGTTCCAATCCCTGCATGTGCC...ACGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp AACAGAGTGGAATTCAGCACCCGCCACAGCAGCCAGCCATGGGGTGCCCAAGAGCTGCGCGATCTGGGCTaGTGGAGCTGGCAGCTAGCG +
Preference number: 4 (lower is better)
Translates to: NRVEFSTRHSSQPWGAQELRDLG*WSWQLA
Trigger: CGCTAGCTGCCAGCTCCAGCAGCCCAGATCGCGCAG...CTCTTGGGCACCCCATGGCTGGCTGCTGTGGCGGGTGCTGAATTCCACTCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249079.6
ENST00000403305.6
CDS-3UTR GCA 90 bp CCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGTGCCACGCAGAAATACTaGGCGATCTGGGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PAWQRSGLQWSSLGYPARATQKY*AIWAAG
Trigger: TCCAGCAGCCCAGATCGCGCAGTATTTCTGCGTGGC...ACGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249079.6
ENST00000403305.6
CDS-3UTR GCA 90 bp AGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGTCTCTGGAGACAGCCGCATCCGCACCGGTaGCACGCAGAAATACTGCGC +
Preference number: 4 (lower is better)
Translates to: RSGLQWSSLGYPARLWRQPHPHR*HAEILR
Trigger: GCGCAGTATTTCTGCGTGGCACCGGTGCGGATGCGG...CTGTCTCCAGAGACGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249079.6
ENST00000403305.6
CDS-3UTR GCA 90 bp TTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGTGGCAGAAGGCTGGTGAGGTGGGGACGGGCTaGGAGGATGGGAGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: LGYCRAVLCHHLTWQKAGEVGTG*EDGRQV
Trigger: TACCTGCCTCCCATCCTCGCAGCCCGTCCCCACCTC...ACCAGCCTTCTGCCACGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp CCCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGTATGCCTTGGGGTACTaGAGGGCAGTGCTATGCCAC +
Preference number: 4 (lower is better)
Translates to: PCLAEEWTPVVELGLPCPYALGY*RAVLCH
Trigger: GTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATA...CGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp TCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGTGGGTTTTGCCCAGCCAGCCATGGGGTaGCCAAGAGGTTGGTTCCCG +
Preference number: 4 (lower is better)
Translates to: SFPAGPRRCTSTELVGFAQPAMG*PRGWFP
Trigger: CGGGAACCAACCTCTTGGGCACCCCATGGCTGGCTG...GGCAAAACCCACCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp AGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGTCTCTGGAGACAGGCAGGGCCTCGCAGATaGACAAGCACGGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RSGLQWSSLGYPARLWRQAGPRR*TSTELV
Trigger: CACCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGC...CTGTCTCCAGAGACGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp GACAAGGTGTCAGGTGACTCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGACGGGCTGCGAGGATaGGAGGCAGGTAGATGGGCG +
Preference number: 4 (lower is better)
Translates to: DKVSGDSFPAGPRRCTSTDGLRG*EAGRWA
Trigger: CGCCCATCTACCTGCCTCCCATCCTCGCAGCCCGTC...CGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGAGTCACCTGACACCTTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp GTATGCCTTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGTGGCAGAATTGGCAGGCCGGAGGTaGGGACGGGCTGCGAGGATG +
Preference number: 4 (lower is better)
Translates to: VCLGVLQGSAMPPPDVAELAGRR*GRAARM
Trigger: CATCCTCGCAGCCCGTCCCCACCTCCGGCCTGCCAA...TTCTGCCACGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGTTGCCTGGCAGAGGAGTaGACTCCAGTGGTCGAGCTT +
Preference number: 4 (lower is better)
Translates to: PAWQRSGLQWSSLGYPARCLAEE*TPVVEL
Trigger: AAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCA...ACGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp AACAGAGTGGAATTCAGCACCCGCCACAGCAGCCAGCCATGGGGTGCCCAAGAGGCTGGTAGGATGGGCTaGCCTGAGGATGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: NRVEFSTRHSSQPWGAQEAGRMG*PEDGPA
Trigger: GGCAGGGCCATCCTCAGGCCAGCCCATCCTACCAGC...CTCTTGGGCACCCCATGGCTGGCTGCTGTGGCGGGTGCTGAATTCCACTCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp GACAAGGTGTCAGGTGACTCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGCTGGTAGGATGGGCTaGCCTGAGGATGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: DKVSGDSFPAGPRRCTSTAGRMG*PEDGPA
Trigger: GGCAGGGCCATCCTCAGGCCAGCCCATCCTACCAGC...CGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGAGTCACCTGACACCTTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGTTGCCACCACCTGACGTaGCAGAAGGCTGGTAGGATG +
Preference number: 4 (lower is better)
Translates to: PAWQRSGLQWSSLGYPARCHHLT*QKAGRM
Trigger: CATCCTACCAGCCTTCTGCCACGTCAGGTGGTGGCA...ACGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp CTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGAGTCTCAGACTGCGCGATCTGGGCTaGTGGAGCTGGCAGCTAGCG +
Preference number: 4 (lower is better)
Translates to: LVGMLGLCFSADGAVSLRLRDLG*WSWQLA
Trigger: CGCTAGCTGCCAGCTCCAGCAGCCCAGATCGCGCAG...TCTGAGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249079.6
ENST00000403305.6
CDS-3UTR GCA 90 bp CCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGTGGCTGGATGTTGGGCTaGACTGTAGGGGCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: PAWQRSGLQWSSLGYPARGWMLG*TVGAKH
Trigger: ATGCTTTGCCCCTACAGTGCAGCCCAACATCCAGCC...ACGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp CTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGAGTCTCAGAGAGGTGGGGACGGGCTaGGAGGATGGGAGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: LVGMLGLCFSADGAVSLREVGTG*EDGRQV
Trigger: TACCTGCCTCCCATCCTCGCAGCCCGTCCCCACCTC...TCTGAGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp ACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGGAGGTGGGGACGGGCTaGGAGGATGGGAGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: THVLVGMLGLCFSADGAVEVGTG*EDGRQV
Trigger: TACCTGCCTCCCATCCTCGCAGCCCGTCCCCACCTC...CACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp CCCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGTGGAGCCTTCTGTCGTaGAGGAGGGGCCTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PCLAEEWTPVVELGLPCPWSLLS*RRGLSF
Trigger: AAAAGAAAGGCCCCTCCTGCACGACAGAAGGCTCCA...CGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp TCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGTGGGTTTTGCCCTCAGAGGCTCCATCTaGATTCCGGGGCAGGGGCTA +
Preference number: 4 (lower is better)
Translates to: SFPAGPRRCTSTELVGFALRGSI*IPGQGL
Trigger: TAGCCCCTGCCCCGGAATGCAGATGGAGCCTCTGAG...GGCAAAACCCACCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp GCTGCTGAGTATGCCTTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGGGGATGCTCGGGCTTTaGTTCTCTGCGGACGGGGCT +
Preference number: 4 (lower is better)
Translates to: AAEYALGYCRAVLCHHLTGMLGL*FSADGA
Trigger: AGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCC...CGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATACTCAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp ACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGCGCGATCTGGGCTGCTaGAGCTGGCAGCTAGCGCCT +
Preference number: 4 (lower is better)
Translates to: THVLVGMLGLCFSADGAVRDLGC*SWQLAP
Trigger: AGGCGCTAGCTGCCAGCTCCAGCAGCCCAGATCGCG...CACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249079.6
ENST00000403305.6
CDS-3UTR CCA 90 bp CCCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGGAAGGTAAGACTCTCTaGCTGGATGTTGGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: PCLAEEWTPVVELGLPCPEGKTL*LDVGLH
Trigger: GTGCAGCCCAACATCCAGCCAGAGAGTCTTACCTTC...CGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGTTGGGAGGCAGGTAGATaGGCGAGGCTATTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: PAWQRSGLQWSSLGYPARWEAGR*ARLFAW
Trigger: CCAAGCAAATAGCCTCGCCCATCTACCTGCCTCCCA...ACGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGAGTCTCAGAGACGGGCTGCGAGGATaGGAGGCAGGTAGATGGGCG +
Preference number: 4 (lower is better)
Translates to: LVGMLGLCFSADGAVSLRDGLRG*EAGRWA
Trigger: CGCCCATCTACCTGCCTCCCATCCTCGCAGCCCGTC...TCTGAGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp AGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGTCTCTGGAGACAGTGGCTTGACACATGTTaGCAGGCCGGAGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: RSGLQWSSLGYPARLWRQWLDTC*QAGGGD
Trigger: GTCCCCACCTCCGGCCTGCCAACATGTGTCAAGCCA...CTGTCTCCAGAGACGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGTGGCTGTAGGCCCCATTaGCTTGACACATGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PAWQRSGLQWSSLGYPARGCRPH*LDTCWQ
Trigger: CTGCCAACATGTGTCAAGCCAATGGGGCCTACAGCC...ACGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp TCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGTGGGTTTTGCCAGAAGGCTGGTAGGATaGGCTGGCCTGAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: SFPAGPRRCTSTELVGFARRLVG*AGLRMA
Trigger: GGCCATCCTCAGGCCAGCCCATCCTACCAGCCTTCT...GGCAAAACCCACCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CACCACCTGACGTGGCAGAAGGCTGGTAGGATGGGCTGGCCTGAGGATGGCCCTTGCCACCACCTGACGTaGCAGAAGGCTGGTAGGATG +
Preference number: 4 (lower is better)
Translates to: HHLTWQKAGRMGWPEDGPCHHLT*QKAGRM
Trigger: CATCCTACCAGCCTTCTGCCACGTCAGGTGGTGGCA...AGGGCCATCCTCAGGCCAGCCCATCCTACCAGCCTTCTGCCACGTCAGGTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp AGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGTCTCTGGAGACAGGGCACATGCAGGGATTaGAACTCCCAGGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RSGLQWSSLGYPARLWRQGTCRD*NSQARA
Trigger: AGCCCTGGCCTGGGAGTTCCAATCCCTGCATGTGCC...CTGTCTCCAGAGACGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp TGTCAGGTGACTCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGAGAAGGCAGGGATCGTaGGTGTCAGGAGCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: CQVTPSQQGLADAQARSWRRQGS*VSGARG
Trigger: CCCTCTGGCTCCTGACACCCACGATCCCTGCCTTCT...CCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGAGTCACCTGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp AACAGAGTGGAATTCAGCACCCGCCACAGCAGCCAGCCATGGGGTGCCCAAGAGCCTTCATCATCACTCTaGGCAGCTCGCAGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: NRVEFSTRHSSQPWGAQEPSSSL*AARRSP
Trigger: CGGGGACCTGCGAGCTGCTCAGAGTGATGATGAAGG...CTCTTGGGCACCCCATGGCTGGCTGCTGTGGCGGGTGCTGAATTCCACTCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249079.6
ENST00000403305.6
CDS-3UTR TCA 90 bp TCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGTGGGTTTTGCCCAAGTGCTATGCCACCACCTaGCGTGGCAGAAGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: SQQGLADAQARSWWVLPKCYATT*RGRRLV
Trigger: TACCAGCCTTCTGCCACGTCAGGTGGTGGCATAGCA...CTTGGGCAAAACCCACCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp TTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGTGGCAGAAGGCTGGTCAGGGGCTAGGCTGCTaGGTATGCCTTGGGGTACTG +
Preference number: 4 (lower is better)
Translates to: LGYCRAVLCHHLTWQKAGQGLGC*VCLGVL
Trigger: CAGTACCCCAAGGCATACTCAGCAGCCTAGCCCCTG...ACCAGCCTTCTGCCACGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp GCTGCTGAGTATGCCTTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGCAGGGGCTAGGCTGCTaGGTATGCCTTGGGGTACTG +
Preference number: 4 (lower is better)
Translates to: AAEYALGYCRAVLCHHLTQGLGC*VCLGVL
Trigger: CAGTACCCCAAGGCATACTCAGCAGCCTAGCCCCTG...CGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATACTCAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp CTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGAGTCTCAGACTGCGGACGGGGCTGTaGGTCTCAGAGGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: LVGMLGLCFSADGAVSLRLRTGL*VSEAPS
Trigger: AGATGGAGCCTCTGAGACTCACAGCCCCGTCCGCAG...TCTGAGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp AAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGACTGCGGACGGGGCTGTaGGTCTCAGAGGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: KHGAGGFCPRKVTRHMQGLRTGL*VSEAPS
Trigger: AGATGGAGCCTCTGAGACTCACAGCCCCGTCCGCAG...TCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp CCCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGAGTGGGACAAGCAAATaGCAGAATACCGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: PCLAEEWTPVVELGLPCPSGTSK*QNTGEG
Trigger: GCCTTCTCCGGTATTCTGTCATTTGCTTGTCCCACT...CGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp AAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGAAAGCATCTCCTCCTCTaGGCAGCTCGCAGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: KHGAGGFCPRKVTRHMQGKHLLL*AARRSP
Trigger: CGGGGACCTGCGAGCTGCTCAGAGGAGGAGATGCTT...TCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619227.4
CDS-3UTR GCA 90 bp AGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGTCTCTGGAGACAGGAGCTTGGGCTACCCTaGCCGTCTCTGGAGACAGAT +
Preference number: 4 (lower is better)
Translates to: RSGLQWSSLGYPARLWRQELGLP*PSLETD
Trigger: ATCTGTCTCCAGAGACGGGCAGGGTAGCCCAAGCTC...CTGTCTCCAGAGACGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp TTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGTGGCAGAAGGCTGGTTGCAGGGCAGTGCTATaGCACCACCTGACGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LGYCRAVLCHHLTWQKAGCRAVL*HHLTWQ
Trigger: CTGCCACGTCAGGTGGTGGCATAGCACTGCCCTGCA...ACCAGCCTTCTGCCACGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp GCTGCTGAGTATGCCTTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGCGGGCTTTGCTTCTCTaGGGACGGGGCTGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: AAEYALGYCRAVLCHHLTRALLL*GRGCES
Trigger: AGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCG...CGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATACTCAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp TTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGTGGCAGAAGGCTGGTCGGGCTTTGCTTCTCTaGGGACGGGGCTGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: LGYCRAVLCHHLTWQKAGRALLL*GRGCES
Trigger: AGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCG...ACCAGCCTTCTGCCACGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp CTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGAGTCTCAGAGGGATGCTCGGGCTTTaGTTCTCTGCGGACGGGGCT +
Preference number: 4 (lower is better)
Translates to: LVGMLGLCFSADGAVSLRGMLGL*FSADGA
Trigger: AGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCC...TCTGAGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp AGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGTCTCTGGAGACAGAGGTCACGCGGCACATaGAGGGATTGGAACTCCCAG +
Preference number: 4 (lower is better)
Translates to: RSGLQWSSLGYPARLWRQRSRGT*RDWNSQ
Trigger: CTGGGAGTTCCAATCCCTGCATGTGCCGCGTGACCT...CTGTCTCCAGAGACGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CCCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGGCGAGGCTATTTGCTTaGAAGGTAAGACTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PCLAEEWTPVVELGLPCPARLFA*KVRLSG
Trigger: GCCAGAGAGTCTTACCTTCCAAGCAAATAGCCTCGC...CGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CACCACCTGACGTGGCAGAAGGCTGGTAGGATGGGCTGGCCTGAGGATGGCCCTTGGGAGGCAGGTAGATaGGCGAGGCTATTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: HHLTWQKAGRMGWPEDGPWEAGR*ARLFAW
Trigger: CCAAGCAAATAGCCTCGCCCATCTACCTGCCTCCCA...AGGGCCATCCTCAGGCCAGCCCATCCTACCAGCCTTCTGCCACGTCAGGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp AGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGAGTCTCAGAGGTGGCTTGACACATGTTaGCAGGCCGGAGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: SRDARALLLCGRGCESQRWLDTC*QAGGGD
Trigger: GTCCCCACCTCCGGCCTGCCAACATGTGTCAAGCCA...CCTCTGAGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp GCTGCTGAGTATGCCTTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGTGGCTTGACACATGTTaGCAGGCCGGAGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: AAEYALGYCRAVLCHHLTWLDTC*QAGGGD
Trigger: GTCCCCACCTCCGGCCTGCCAACATGTGTCAAGCCA...CGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATACTCAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp AACAGAGTGGAATTCAGCACCCGCCACAGCAGCCAGCCATGGGGTGCCCAAGAGTCCAGTGGTCGAGCTTaGGCTACCCTGCCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: NRVEFSTRHSSQPWGAQESSGRA*ATLPVS
Trigger: AGAGACGGGCAGGGTAGCCCAAGCTCGACCACTGGA...CTCTTGGGCACCCCATGGCTGGCTGCTGTGGCGGGTGCTGAATTCCACTCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp AGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGTCTCTGGAGACAGAGGAGTGGACTCCAGTaGTCGAGCTTGGGCTACCCT +
Preference number: 4 (lower is better)
Translates to: RSGLQWSSLGYPARLWRQRSGLQ*SSLGYP
Trigger: AGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCT...CTGTCTCCAGAGACGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp GACAAGGTGTCAGGTGACTCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGAGAAGGCAGGGATCGTaGGTGTCAGGAGCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: DKVSGDSFPAGPRRCTSTRRQGS*VSGARG
Trigger: CCCTCTGGCTCCTGACACCCACGATCCCTGCCTTCT...CGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGAGTCACCTGACACCTTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CACCACCTGACGTGGCAGAAGGCTGGTAGGATGGGCTGGCCTGAGGATGGCCCTGCTTCTGTGAAGCCATaGGAGGACTCAGTCAGCGCA +
Preference number: 4 (lower is better)
Translates to: HHLTWQKAGRMGWPEDGPASVKP*EDSVSA
Trigger: TGCGCTGACTGAGTCCTCCCATGGCTTCACAGAAGC...AGGGCCATCCTCAGGCCAGCCCATCCTACCAGCCTTCTGCCACGTCAGGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619227.4
CDS-3UTR TCA 90 bp ACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGTGGTGGCTTGAGGCTTaGACTGCTCCCGGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: THVLVGMLGLCFSADGAVWWLEA*TAPGCR
Trigger: CCTACAGCCGGGAGCAGTTCAAGCCTCAAGCCACCA...CACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp AACAGAGTGGAATTCAGCACCCGCCACAGCAGCCAGCCATGGGGTGCCCAAGAGTGCTATGCCACCACCTaGCGTGGCAGAAGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: NRVEFSTRHSSQPWGAQECYATT*RGRRLV
Trigger: TACCAGCCTTCTGCCACGTCAGGTGGTGGCATAGCA...CTCTTGGGCACCCCATGGCTGGCTGCTGTGGCGGGTGCTGAATTCCACTCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp GTATGCCTTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGTGGCAGAACAGGGGCTAGGCTGCTaGGTATGCCTTGGGGTACTG +
Preference number: 4 (lower is better)
Translates to: VCLGVLQGSAMPPPDVAEQGLGC*VCLGVL
Trigger: CAGTACCCCAAGGCATACTCAGCAGCCTAGCCCCTG...TTCTGCCACGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp AACAGAGTGGAATTCAGCACCCGCCACAGCAGCCAGCCATGGGGTGCCCAAGAGGCCACGCAGAAATACTaGGCGATCTGGGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: NRVEFSTRHSSQPWGAQEATQKY*AIWAAG
Trigger: TCCAGCAGCCCAGATCGCGCAGTATTTCTGCGTGGC...CTCTTGGGCACCCCATGGCTGGCTGCTGTGGCGGGTGCTGAATTCCACTCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249079.6
ENST00000403305.6
CDS-3UTR GCA 90 bp GACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGGAGGCGGTGACCACTaGTTTACAGCCGCATCCGCA +
Preference number: 4 (lower is better)
Translates to: DTCPSRDARALLLCGRGCGGGDH*FTAASA
Trigger: TGCGGATGCGGCTGTAAAGCAGTGGTCACCGCCTCC...ACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249079.6
ENST00000403305.6
CDS-3UTR GCA 90 bp TTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGTGGCAGAAGGCTGGTTTCCTCGGTACTGTTTaGCCTGTCCCAGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LGYCRAVLCHHLTWQKAGFLGTV*PVPGPP
Trigger: TGGAGGCCCTGGGACAGGGCAAACAGTACCGAGGAA...ACCAGCCTTCTGCCACGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CACCACCTGACGTGGCAGAAGGCTGGTAGGATGGGCTGGCCTGAGGATGGCCCTTACCCTGCCCGTCTCTaGAGACAGATTAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: HHLTWQKAGRMGWPEDGPYPARL*RQIKWW
Trigger: CCACCACTTAATCTGTCTCCAGAGACGGGCAGGGTA...AGGGCCATCCTCAGGCCAGCCCATCCTACCAGCCTTCTGCCACGTCAGGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp GTATGCCTTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGTGGCAGAATCCAGTGGTCGAGCTTaGGCTACCCTGCCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: VCLGVLQGSAMPPPDVAESSGRA*ATLPVS
Trigger: AGAGACGGGCAGGGTAGCCCAAGCTCGACCACTGGA...TTCTGCCACGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp AACAGAGTGGAATTCAGCACCCGCCACAGCAGCCAGCCATGGGGTGCCCAAGAGTGCCACCACCTGACGTaGCAGAAGGCTGGTAGGATG +
Preference number: 4 (lower is better)
Translates to: NRVEFSTRHSSQPWGAQECHHLT*QKAGRM
Trigger: CATCCTACCAGCCTTCTGCCACGTCAGGTGGTGGCA...CTCTTGGGCACCCCATGGCTGGCTGCTGTGGCGGGTGCTGAATTCCACTCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp AACAGAGTGGAATTCAGCACCCGCCACAGCAGCCAGCCATGGGGTGCCCAAGAGCTGCTGAGTATGCCTTaGGGTACTGCAGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: NRVEFSTRHSSQPWGAQELLSMP*GTAGQC
Trigger: GCACTGCCCTGCAGTACCCCAAGGCATACTCAGCAG...CTCTTGGGCACCCCATGGCTGGCTGCTGTGGCGGGTGCTGAATTCCACTCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp TGTCAGGTGACTCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGGGGTGCCCAAGAGGTTaGTTCCCGTTGCCACTTGAA +
Preference number: 4 (lower is better)
Translates to: CQVTPSQQGLADAQARSWGCPRG*FPLPLE
Trigger: TTCAAGTGGCAACGGGAACCAACCTCTTGGGCACCC...CCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGAGTCACCTGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp TTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGTGGCAGAAGGCTGGTGACCTGATGGGATTATaGGACTCCCTCCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LGYCRAVLCHHLTWQKAGDLMGL*DSLQVP
Trigger: GGGCACCTGGAGGGAGTCCCATAATCCCATCAGGTC...ACCAGCCTTCTGCCACGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR CAA 72 bp TTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGATaGGAACTCCCAGGCCAGGGCTCTAGGTCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: FCPRKVTRHMQG*ELPGQGSRSLP
Trigger: TGGGAGCGACCTAGAGCCCTGGCCTGGGAGTTCCAATCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR CAA 72 bp GGCCTCGCAGATGCACAAGCACGGAGCTGGTGGGTTTaGCCCAAGAAAGGTCACGCGGCACATGCAGGGATT +
Preference number: 4 (lower is better)
Translates to: GLADAQARSWWV*PKKGHAAHAGI
Trigger: AATCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTTGTGCATCTGCGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp CTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGAGTCTCAGAAAATCCCTGGTGGCTTaGGGCTTGAACTGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LVGMLGLCFSADGAVSLRKSLVA*GLNCSR
Trigger: CCGGGAGCAGTTCAAGCCTCAAGCCACCAGGGATTT...TCTGAGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp GACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTAAATCCCTGGTGGCTTaGGGCTTGAACTGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: DTCPSRDARALLLCGRGCKSLVA*GLNCSR
Trigger: CCGGGAGCAGTTCAAGCCTCAAGCCACCAGGGATTT...ACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp ACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGGAGCTTGGGCTACCCTaGCCGTCTCTGGAGACAGAT +
Preference number: 4 (lower is better)
Translates to: THVLVGMLGLCFSADGAVELGLP*PSLETD
Trigger: ATCTGTCTCCAGAGACGGGCAGGGTAGCCCAAGCTC...CACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp GCTGCTGAGTATGCCTTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGTATGCCTTGGGGTACTaGAGGGCAGTGCTATGCCAC +
Preference number: 4 (lower is better)
Translates to: AAEYALGYCRAVLCHHLTYALGY*RAVLCH
Trigger: GTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATA...CGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATACTCAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp CCCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGTGCTTGCCAGGTAAATaGCCTTGGTTGTGGTATCTT +
Preference number: 4 (lower is better)
Translates to: PCLAEEWTPVVELGLPCPCLPGK*PWLWYL
Trigger: AAGATACCACAACCAAGGGCATTTACCTGGCAAGCA...CGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp CACCACCTGACGTGGCAGAAGGCTGGTAGGATGGGCTGGCCTGAGGATGGCCCTCCTGAATGCACTGCTTaGCAGGTAAATGCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: HHLTWQKAGRMGWPEDGPPECTA*QVNALG
Trigger: ACCAAGGGCATTTACCTGGCAAGCAGTGCATTCAGG...AGGGCCATCCTCAGGCCAGCCCATCCTACCAGCCTTCTGCCACGTCAGGTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp ACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGAGGTCACGCGGCACATaGAGGGATTGGAACTCCCAG +
Preference number: 4 (lower is better)
Translates to: THVLVGMLGLCFSADGAVRSRGT*RDWNSQ
Trigger: CTGGGAGTTCCAATCCCTGCATGTGCCGCGTGACCT...CACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp GACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGGAGCTGGTGGGTTTTaGCCAAGAAAGGTCACGCGG +
Preference number: 4 (lower is better)
Translates to: DTCPSRDARALLLCGRGCGAGGF*PRKVTR
Trigger: CCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCC...ACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp ACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGAAATACTGCGCGATCTaGGCTGCTGGAGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: THVLVGMLGLCFSADGAVKYCAI*AAGAGS
Trigger: GCTGCCAGCTCCAGCAGCCCAGATCGCGCAGTATTT...CACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249079.6
ENST00000403305.6
CDS-3UTR CCA 90 bp CAGATGCACAAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACTGCCTGGCAGAGGAGTaGACTCCAGTGGTCGAGCTT +
Preference number: 4 (lower is better)
Translates to: QMHKHGAGGFCPRKVTRHCLAEE*TPVVEL
Trigger: AAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCA...GTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTTGTGCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp AGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGAGTCTCAGAGGACAGGTCAGAAGTGGTaGGAAGCAGGCCCAGTGGAT +
Preference number: 4 (lower is better)
Translates to: SRDARALLLCGRGCESQRTGQKW*EAGPVD
Trigger: ATCCACTGGGCCTGCTTCCCACCACTTCTGACCTGT...CCTCTGAGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp TGTCAGGTGACTCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGGCACAAGCACGGAGCTaGTGGGTTTTGCCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: CQVTPSQQGLADAQARSWAQARS*WVLPKK
Trigger: TTTCTTGGGCAAAACCCACCAGCTCCGTGCTTGTGC...CCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGAGTCACCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp CAGTGGATACCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCGGCTCCCGGAGGCGGTaGCCACTGCTTTACAGCCGC +
Preference number: 4 (lower is better)
Translates to: QWIPLDTCPSRDARALLLGSRRR*PLLYSR
Trigger: GCGGCTGTAAAGCAGTGGTCACCGCCTCCGGGAGCC...GAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGGTATCCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249079.6
ENST00000403305.6
CDS-3UTR TCA 90 bp TGGAACTCCCAGGCCAGGGCTCTAGGTCGCTCCCACCTTTTCATGTTTCTTTCTGGACAAGGTGTCAGGTaGCTCCTTCCCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: WNSQARALGRSHLFMFLSGQGVR*LLPSRA
Trigger: GGCCCTGCTGGGAAGGAGTCACCTGACACCTTGTCC...AGAAAGAAACATGAAAAGGTGGGAGCGACCTAGAGCCCTGGCCTGGGAGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp CACCACCTGACGTGGCAGAAGGCTGGTAGGATGGGCTGGCCTGAGGATGGCCCTGAAACTTGGGTCATGTaGCCTGATGGGATTATGGGA +
Preference number: 4 (lower is better)
Translates to: HHLTWQKAGRMGWPEDGPETWVM*PDGIMG
Trigger: TCCCATAATCCCATCAGGTCACATGACCCAAGTTTC...AGGGCCATCCTCAGGCCAGCCCATCCTACCAGCCTTCTGCCACGTCAGGTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp AACAGAGTGGAATTCAGCACCCGCCACAGCAGCCAGCCATGGGGTGCCCAAGAGTGGAGCCTTCTGTCGTaGAGGAGGGGCCTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: NRVEFSTRHSSQPWGAQEWSLLS*RRGLSF
Trigger: AAAAGAAAGGCCCCTCCTGCACGACAGAAGGCTCCA...CTCTTGGGCACCCCATGGCTGGCTGCTGTGGCGGGTGCTGAATTCCACTCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp TGGAACTCCCAGGCCAGGGCTCTAGGTCGCTCCCACCTTTTCATGTTTCTTTCTGGGATGCTCGGGCTTTaGTTCTCTGCGGACGGGGCT +
Preference number: 4 (lower is better)
Translates to: WNSQARALGRSHLFMFLSGMLGL*FSADGA
Trigger: AGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCC...AGAAAGAAACATGAAAAGGTGGGAGCGACCTAGAGCCCTGGCCTGGGAGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp TGGAACTCCCAGGCCAGGGCTCTAGGTCGCTCCCACCTTTTCATGTTTCTTTCTCAGCCAGCCATGGGGTaGCCAAGAGGTTGGTTCCCG +
Preference number: 4 (lower is better)
Translates to: WNSQARALGRSHLFMFLSQPAMG*PRGWFP
Trigger: CGGGAACCAACCTCTTGGGCACCCCATGGCTGGCTG...AGAAAGAAACATGAAAAGGTGGGAGCGACCTAGAGCCCTGGCCTGGGAGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp GACAAGGTGTCAGGTGACTCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAAGGTAAGACTCTCTaGCTGGATGTTGGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: DKVSGDSFPAGPRRCTSTEGKTL*LDVGLH
Trigger: GTGCAGCCCAACATCCAGCCAGAGAGTCTTACCTTC...CGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGAGTCACCTGACACCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp AAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGAGGCTGTAGGCCCCATTaGCTTGACACATGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: KHGAGGFCPRKVTRHMQGGCRPH*LDTCWQ
Trigger: CTGCCAACATGTGTCAAGCCAATGGGGCCTACAGCC...TCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp GCTGCTGAGTATGCCTTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGTACCCTGCCCGTCTCTaGAGACAGATTAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: AAEYALGYCRAVLCHHLTYPARL*RQIKWW
Trigger: CCACCACTTAATCTGTCTCCAGAGACGGGCAGGGTA...CGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATACTCAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGAGTCTCAGAACAGGTCAGAAGTGGTaGGAAGCAGGCCCAGTGGAT +
Preference number: 4 (lower is better)
Translates to: LVGMLGLCFSADGAVSLRTGQKW*EAGPVD
Trigger: ATCCACTGGGCCTGCTTCCCACCACTTCTGACCTGT...TCTGAGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp GACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGGGTGCCCAAGAGGTTaGTTCCCGTTGCCACTTGAA +
Preference number: 4 (lower is better)
Translates to: DTCPSRDARALLLCGRGCGCPRG*FPLPLE
Trigger: TTCAAGTGGCAACGGGAACCAACCTCTTGGGCACCC...ACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CAGATGCACAAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACGGGTGCCCAAGAGGTTaGTTCCCGTTGCCACTTGAA +
Preference number: 4 (lower is better)
Translates to: QMHKHGAGGFCPRKVTRHGCPRG*FPLPLE
Trigger: TTCAAGTGGCAACGGGAACCAACCTCTTGGGCACCC...GTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTTGTGCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp GCTGCTGAGTATGCCTTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGCAAGCACGGAGCTGGTaGGTTTTGCCCAAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: AAEYALGYCRAVLCHHLTQARSW*VLPKKG
Trigger: ACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTTG...CGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATACTCAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp AAACCGAAACTTGGGTCATGTGACCTGATGGGATTATGGGACTCCCTCCAGGTGCTGCGGACGGGGCTGTaGGTCTCAGAGGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: KPKLGSCDLMGLWDSLQVLRTGL*VSEAPS
Trigger: AGATGGAGCCTCTGAGACTCACAGCCCCGTCCGCAG...CACCTGGAGGGAGTCCCATAATCCCATCAGGTCACATGACCCAAGTTTCGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp TGGAACTCCCAGGCCAGGGCTCTAGGTCGCTCCCACCTTTTCATGTTTCTTTCTTGCAGGGCAGTGCTATaGCACCACCTGACGTGGCAG +
Preference number: 4 (lower is better)
Translates to: WNSQARALGRSHLFMFLSCRAVL*HHLTWQ
Trigger: CTGCCACGTCAGGTGGTGGCATAGCACTGCCCTGCA...AGAAAGAAACATGAAAAGGTGGGAGCGACCTAGAGCCCTGGCCTGGGAGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp CAGGTCAGAAGTGGTGGGAAGCAGGCCCAGTGGATACCTTTAGACACATGTCCTTGCAGGGCAGTGCTATaGCACCACCTGACGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QVRSGGKQAQWIPLDTCPCRAVL*HHLTWQ
Trigger: CTGCCACGTCAGGTGGTGGCATAGCACTGCCCTGCA...AGGACATGTGTCTAAAGGTATCCACTGGGCCTGCTTCCCACCACTTCTGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp TGGAACTCCCAGGCCAGGGCTCTAGGTCGCTCCCACCTTTTCATGTTTCTTTCTCTCAGAGGCTCCATCTaGATTCCGGGGCAGGGGCTA +
Preference number: 4 (lower is better)
Translates to: WNSQARALGRSHLFMFLSLRGSI*IPGQGL
Trigger: TAGCCCCTGCCCCGGAATGCAGATGGAGCCTCTGAG...AGAAAGAAACATGAAAAGGTGGGAGCGACCTAGAGCCCTGGCCTGGGAGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp TGGAACTCCCAGGCCAGGGCTCTAGGTCGCTCCCACCTTTTCATGTTTCTTTCTCGGGCTTTGCTTCTCTaGGGACGGGGCTGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: WNSQARALGRSHLFMFLSRALLL*GRGCES
Trigger: AGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCG...AGAAAGAAACATGAAAAGGTGGGAGCGACCTAGAGCCCTGGCCTGGGAGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp CACCACCTGACGTGGCAGAAGGCTGGTAGGATGGGCTGGCCTGAGGATGGCCCTTGCTTGCCAGGTAAATaGCCTTGGTTGTGGTATCTT +
Preference number: 4 (lower is better)
Translates to: HHLTWQKAGRMGWPEDGPCLPGK*PWLWYL
Trigger: AAGATACCACAACCAAGGGCATTTACCTGGCAAGCA...AGGGCCATCCTCAGGCCAGCCCATCCTACCAGCCTTCTGCCACGTCAGGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp AACAGAGTGGAATTCAGCACCCGCCACAGCAGCCAGCCATGGGGTGCCCAAGAGGTAAGACTCTCTGGCTaGATGTTGGGCTGCACTGTA +
Preference number: 4 (lower is better)
Translates to: NRVEFSTRHSSQPWGAQEVRLSG*MLGCTV
Trigger: TACAGTGCAGCCCAACATCCAGCCAGAGAGTCTTAC...CTCTTGGGCACCCCATGGCTGGCTGCTGTGGCGGGTGCTGAATTCCACTCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp TGGAACTCCCAGGCCAGGGCTCTAGGTCGCTCCCACCTTTTCATGTTTCTTTCTAGAAGGCTGGTAGGATaGGCTGGCCTGAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: WNSQARALGRSHLFMFLSRRLVG*AGLRMA
Trigger: GGCCATCCTCAGGCCAGCCCATCCTACCAGCCTTCT...AGAAAGAAACATGAAAAGGTGGGAGCGACCTAGAGCCCTGGCCTGGGAGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp GCTGCTGAGTATGCCTTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGGGGAAGCAGGCCCAGTaGATACCTTTAGACACATGT +
Preference number: 4 (lower is better)
Translates to: AAEYALGYCRAVLCHHLTGKQAQ*IPLDTC
Trigger: ACATGTGTCTAAAGGTATCCACTGGGCCTGCTTCCC...CGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATACTCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CAGATGCACAAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACCAAGCACGGAGCTGGTaGGTTTTGCCCAAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: QMHKHGAGGFCPRKVTRHQARSW*VLPKKG
Trigger: ACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTTG...GTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTTGTGCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp AAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGAGCACAAGCACGGAGCTaGTGGGTTTTGCCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: KHGAGGFCPRKVTRHMQGAQARS*WVLPKK
Trigger: TTTCTTGGGCAAAACCCACCAGCTCCGTGCTTGTGC...TCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR CAA 72 bp CCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTaGCTTCTCTGCGGACGGGGCTGTGAGTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: PLDTCPSRDARA*LLCGRGCESQR
Trigger: CCTCTGAGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp GACAAGGTGTCAGGTGACTCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGTTCCCGTTGCCACTTaGAATATGCAAACAGGTAGC +
Preference number: 4 (lower is better)
Translates to: DKVSGDSFPAGPRRCTSTVPVAT*NMQTGS
Trigger: GCTACCTGTTTGCATATTTCAAGTGGCAACGGGAAC...CGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGAGTCACCTGACACCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp GACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGTCACTACCTCCATCTaGTTCTGTGAAGCCATGGGA +
Preference number: 4 (lower is better)
Translates to: DTCPSRDARALLLCGRGCVTTSI*FCEAMG
Trigger: TCCCATGGCTTCACAGAAGCAGATGGAGGTAGTGAC...ACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp CAGATGCACAAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACGTCACTACCTCCATCTaGTTCTGTGAAGCCATGGGA +
Preference number: 4 (lower is better)
Translates to: QMHKHGAGGFCPRKVTRHVTTSI*FCEAMG
Trigger: TCCCATGGCTTCACAGAAGCAGATGGAGGTAGTGAC...GTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTTGTGCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp CCCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGTTGCCACTTGAAATATaGAAACAGGTAGCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: PCLAEEWTPVVELGLPCPLPLEI*KQVARN
Trigger: GTTTCTAGCTACCTGTTTGCATATTTCAAGTGGCAA...CGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp CAGTGGATACCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCGCAGGGCCTCGCAGATaGACAAGCACGGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: QWIPLDTCPSRDARALLLAGPRR*TSTELV
Trigger: CACCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGC...GAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGGTATCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp AACAGAGTGGAATTCAGCACCCGCCACAGCAGCCAGCCATGGGGTGCCCAAGAGGTGTTAACACAGCCATaGTCACAACAGTACCCACTG +
Preference number: 4 (lower is better)
Translates to: NRVEFSTRHSSQPWGAQEVLTQP*SQQYPL
Trigger: CAGTGGGTACTGTTGTGACCATGGCTGTGTTAACAC...CTCTTGGGCACCCCATGGCTGGCTGCTGTGGCGGGTGCTGAATTCCACTCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249079.6
CDS-3UTR CCA 90 bp GACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGGAACCCAGTTCCTTTaGTCACTACCTCCATCTGCT +
Preference number: 4 (lower is better)
Translates to: DTCPSRDARALLLCGRGCGTQFL*SLPPSA
Trigger: AGCAGATGGAGGTAGTGACCAAAGGAACTGGGTTCC...ACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CAGATGCACAAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACGGAACCCAGTTCCTTTaGTCACTACCTCCATCTGCT +
Preference number: 4 (lower is better)
Translates to: QMHKHGAGGFCPRKVTRHGTQFL*SLPPSA
Trigger: AGCAGATGGAGGTAGTGACCAAAGGAACTGGGTTCC...GTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTTGTGCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp GTATGCCTTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGTGGCAGAAATGATGTCCATGATGTaGCGCTGCTGGATGTTCGTC +
Preference number: 4 (lower is better)
Translates to: VCLGVLQGSAMPPPDVAEMMSMM*RCWMFV
Trigger: GACGAACATCCAGCAGCGCCACATCATGGACATCAT...TTCTGCCACGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249079.6
ENST00000403305.6
CDS-3UTR CCA 90 bp AAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGAGTAAGACTCTCTGGCTaGATGTTGGGCTGCACTGTA +
Preference number: 4 (lower is better)
Translates to: KHGAGGFCPRKVTRHMQGVRLSG*MLGCTV
Trigger: TACAGTGCAGCCCAACATCCAGCCAGAGAGTCTTAC...TCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp GGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGATTGGAACTCCCAGGCCGGGAAGCAGGCCCAGTaGATACCTTTAGACACATGT +
Preference number: 4 (lower is better)
Translates to: GFAQERSRGTCRDWNSQAGKQAQ*IPLDTC
Trigger: ACATGTGTCTAAAGGTATCCACTGGGCCTGCTTCCC...GGCCTGGGAGTTCCAATCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp TCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGTGGGTTTTGCCCAAGAGATCATTAACAGAGTaGAATTCAGCACCCGCCACA +
Preference number: 4 (lower is better)
Translates to: SQQGLADAQARSWWVLPKRSLTE*NSAPAT
Trigger: TGTGGCGGGTGCTGAATTCCACTCTGTTAATGATCT...CTTGGGCAAAACCCACCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp GATTGGAACTCCCAGGCCAGGGCTCTAGGTCGCTCCCACCTTTTCATGTTTCTTGACCTGATGGGATTATaGGACTCCCTCCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: DWNSQARALGRSHLFMFLDLMGL*DSLQVP
Trigger: GGGCACCTGGAGGGAGTCCCATAATCCCATCAGGTC...AAGAAACATGAAAAGGTGGGAGCGACCTAGAGCCCTGGCCTGGGAGTTCCAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp GACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGTTCCCGTTGCCACTTaGAATATGCAAACAGGTAGC +
Preference number: 4 (lower is better)
Translates to: DTCPSRDARALLLCGRGCVPVAT*NMQTGS
Trigger: GCTACCTGTTTGCATATTTCAAGTGGCAACGGGAAC...ACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp GACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTATGGGCGAGGCTATTTaGTTGGAAGGTAAGACTCTC +
Preference number: 4 (lower is better)
Translates to: DTCPSRDARALLLCGRGCMGEAI*LEGKTL
Trigger: GAGAGTCTTACCTTCCAAGCAAATAGCCTCGCCCAT...ACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp CAGATGCACAAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACATGGGCGAGGCTATTTaGTTGGAAGGTAAGACTCTC +
Preference number: 4 (lower is better)
Translates to: QMHKHGAGGFCPRKVTRHMGEAI*LEGKTL
Trigger: GAGAGTCTTACCTTCCAAGCAAATAGCCTCGCCCAT...GTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTTGTGCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp AAACCGAAACTTGGGTCATGTGACCTGATGGGATTATGGGACTCCCTCCAGGTGGAGCTTGGGCTACCCTaGCCGTCTCTGGAGACAGAT +
Preference number: 4 (lower is better)
Translates to: KPKLGSCDLMGLWDSLQVELGLP*PSLETD
Trigger: ATCTGTCTCCAGAGACGGGCAGGGTAGCCCAAGCTC...CACCTGGAGGGAGTCCCATAATCCCATCAGGTCACATGACCCAAGTTTCGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp TGGAACTCCCAGGCCAGGGCTCTAGGTCGCTCCCACCTTTTCATGTTTCTTTCTTATGCCTTGGGGTACTaGAGGGCAGTGCTATGCCAC +
Preference number: 4 (lower is better)
Translates to: WNSQARALGRSHLFMFLSYALGY*RAVLCH
Trigger: GTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATA...AGAAAGAAACATGAAAAGGTGGGAGCGACCTAGAGCCCTGGCCTGGGAGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp AGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGAGTCTCAGAGGGAGGTTGGTTCCCGTTaGCACTTGAAATATGCAAAC +
Preference number: 4 (lower is better)
Translates to: SRDARALLLCGRGCESQREVGSR*HLKYAN
Trigger: GTTTGCATATTTCAAGTGGCAACGGGAACCAACCTC...CCTCTGAGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp TTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGTGGCAGAAGGCTGGTCCATGTCCTTCCCTGTaGCAAAGATATTTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: LGYCRAVLCHHLTWQKAGPCPSL*QRYFGV
Trigger: GACTCCAAAATATCTTTGCCACAGGGAAGGACATGG...ACCAGCCTTCTGCCACGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp AGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGAGTCTCAGAGGTCCTCACTCCTTCTGTaGTCAATGTCTTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: SRDARALLLCGRGCESQRSSLLL*SMSSIS
Trigger: GGAAATGGAAGACATTGACCACAGAAGGAGTGAGGA...CCTCTGAGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CAGTGGATACCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCAGAAGGCTGGTAGGATaGGCTGGCCTGAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: QWIPLDTCPSRDARALLLRRLVG*AGLRMA
Trigger: GGCCATCCTCAGGCCAGCCCATCCTACCAGCCTTCT...GAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGGTATCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp GCTGCTGAGTATGCCTTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGCCAGGTAAATGCCCTTaGTTGTGGTATCTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: AAEYALGYCRAVLCHHLTPGKCP*LWYLVE
Trigger: CTCAACAAGATACCACAACCAAGGGCATTTACCTGG...CGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATACTCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp CACCACCTGACGTGGCAGAAGGCTGGTAGGATGGGCTGGCCTGAGGATGGCCCTTGCCCGAGACAAGGTTaGTATTTCCAAAATATTTTG +
Preference number: 4 (lower is better)
Translates to: HHLTWQKAGRMGWPEDGPCPRQG*YFQNIL
Trigger: CAAAATATTTTGGAAATATCAACCTTGTCTCGGGCA...AGGGCCATCCTCAGGCCAGCCCATCCTACCAGCCTTCTGCCACGTCAGGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp CGTTGCAGAGGTTTATTGAGATCATTAACAGAGTGGAATTCAGCACCCGCCACACAGCCAGCCATGGGGTaGCCAAGAGGTTGGTTCCCG +
Preference number: 4 (lower is better)
Translates to: RCRGLLRSLTEWNSAPATQPAMG*PRGWFP
Trigger: CGGGAACCAACCTCTTGGGCACCCCATGGCTGGCTG...TGTGGCGGGTGCTGAATTCCACTCTGTTAATGATCTCAATAAACCTCTGCAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp CAGTGGATACCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCGGAGCTGGTGGGTTTTaGCCAAGAAAGGTCACGCGG +
Preference number: 4 (lower is better)
Translates to: QWIPLDTCPSRDARALLLGAGGF*PRKVTR
Trigger: CCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCC...GAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGGTATCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CAGTGGATACCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCGCTTCTGTGAAGCCATaGGAGGACTCCAGCGCCTGT +
Preference number: 4 (lower is better)
Translates to: QWIPLDTCPSRDARALLLASVKP*EDSSAC
Trigger: ACAGGCGCTGGAGTCCTCCCATGGCTTCACAGAAGC...GAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGGTATCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249079.6
CDS-3UTR CCA 90 bp AGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGAGTCTCAGAGGGGATGTTCGTCAGTTTaGATTCCTTCATCATCACTC +
Preference number: 4 (lower is better)
Translates to: SRDARALLLCGRGCESQRGCSSV*IPSSSL
Trigger: GAGTGATGATGAAGGAATCCAAACTGACGAACATCC...CCTCTGAGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249079.6
ENST00000403305.6
CDS-3UTR CCA 90 bp AACAGAGTGGAATTCAGCACCCGCCACAGCAGCCAGCCATGGGGTGCCCAAGAGGGATGTTCGTCAGTTTaGATTCCTTCATCATCACTC +
Preference number: 4 (lower is better)
Translates to: NRVEFSTRHSSQPWGAQEGCSSV*IPSSSL
Trigger: GAGTGATGATGAAGGAATCCAAACTGACGAACATCC...CTCTTGGGCACCCCATGGCTGGCTGCTGTGGCGGGTGCTGAATTCCACTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249079.6
ENST00000403305.6
CDS-3UTR CCA 90 bp CTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGAGTCTCAGACCATGTCCTTCCCTGTaGCAAAGATATTTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: LVGMLGLCFSADGAVSLRPCPSL*QRYFGV
Trigger: GACTCCAAAATATCTTTGCCACAGGGAAGGACATGG...TCTGAGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp AAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGACCATGTCCTTCCCTGTaGCAAAGATATTTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: KHGAGGFCPRKVTRHMQGPCPSL*QRYFGV
Trigger: GACTCCAAAATATCTTTGCCACAGGGAAGGACATGG...TCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp ACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGATTTCCCGGAGTTTCTaGGAGATTTCAGCAAGGATG +
Preference number: 4 (lower is better)
Translates to: THVLVGMLGLCFSADGAVISRSF*EISARM
Trigger: CATCCTTGCTGAAATCTCCCAGAAACTCCGGGAAAT...CACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp GACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTTCCTCACTCCTTCTGTaGTCAATGTCTTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: DTCPSRDARALLLCGRGCSSLLL*SMSSIS
Trigger: GGAAATGGAAGACATTGACCACAGAAGGAGTGAGGA...ACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CAGTGGATACCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCAGGAGTGGACTCCAGTaGTCGAGCTTGGGCTACCCT +
Preference number: 4 (lower is better)
Translates to: QWIPLDTCPSRDARALLLRSGLQ*SSLGYP
Trigger: AGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCT...GAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGGTATCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp GACTCCCTCCAGGTGCCCGAGACAAGGTTGATATTTCCAAAATATTTTGGTGATGCTGGTAGGATGGGCTaGCCTGAGGATGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: DSLQVPETRLIFPKYFGDAGRMG*PEDGPA
Trigger: GGCAGGGCCATCCTCAGGCCAGCCCATCCTACCAGC...ATCACCAAAATATTTTGGAAATATCAACCTTGTCTCGGGCACCTGGAGGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp GACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTAGATCATTAACAGAGTaGAATTCAGCACCCGCCACA +
Preference number: 4 (lower is better)
Translates to: DTCPSRDARALLLCGRGCRSLTE*NSAPAT
Trigger: TGTGGCGGGTGCTGAATTCCACTCTGTTAATGATCT...ACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp ACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGAGATCATTAACAGAGTaGAATTCAGCACCCGCCACA +
Preference number: 4 (lower is better)
Translates to: THVLVGMLGLCFSADGAVRSLTE*NSAPAT
Trigger: TGTGGCGGGTGCTGAATTCCACTCTGTTAATGATCT...CACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp ACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGCCAGGTAAATGCCCTTaGTTGTGGTATCTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: THVLVGMLGLCFSADGAVPGKCP*LWYLVE
Trigger: CTCAACAAGATACCACAACCAAGGGCATTTACCTGG...CACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR CAA 72 bp CAGCCAGCCATGGGGTGCCCAAGAGGTTGGTTCCCGTaGCCACTTGAAATATGCAAACAGGTAGCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: QPAMGCPRGWFP*PLEICKQVARN
Trigger: GTTTCTAGCTACCTGTTTGCATATTTCAAGTGGCAACGGGAACCAACCTCTTGGGCACCCCATGGCTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp TTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGTGGCAGAAGGCTGGTGTGATATGCCAAAATTaGAATTTCACCCTAAGACCC +
Preference number: 4 (lower is better)
Translates to: LGYCRAVLCHHLTWQKAGVICQN*NFTLRP
Trigger: GGGTCTTAGGGTGAAATTTCAATTTTGGCATATCAC...ACCAGCCTTCTGCCACGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249079.6
CDS-3UTR TCA 90 bp GACAAGGTGTCAGGTGACTCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGTTGTGGTATCTTGTTaGGACTTAGTTTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: DKVSGDSFPAGPRRCTSTVVVSC*DLVFTE
Trigger: CTCTGTGAAAACTAAGTCTCAACAAGATACCACAAC...CGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGAGTCACCTGACACCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp TGTCAGGTGACTCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGTGCCCGAGACAAGGTTaGTATTTCCAAAATATTTTG +
Preference number: 4 (lower is better)
Translates to: CQVTPSQQGLADAQARSWCPRQG*YFQNIL
Trigger: CAAAATATTTTGGAAATATCAACCTTGTCTCGGGCA...CCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGAGTCACCTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CAGGTCAGAAGTGGTGGGAAGCAGGCCCAGTGGATACCTTTAGACACATGTCCTGTAAGACTCTCTGGCTaGATGTTGGGCTGCACTGTA +
Preference number: 4 (lower is better)
Translates to: QVRSGGKQAQWIPLDTCPVRLSG*MLGCTV
Trigger: TACAGTGCAGCCCAACATCCAGCCAGAGAGTCTTAC...AGGACATGTGTCTAAAGGTATCCACTGGGCCTGCTTCCCACCACTTCTGACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CAGTGGATACCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGGGAGGCAGGTAGATaGGCGAGGCTATTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: QWIPLDTCPSRDARALLLWEAGR*ARLFAW
Trigger: CCAAGCAAATAGCCTCGCCCATCTACCTGCCTCCCA...GAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGGTATCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CAGTGGATACCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCGGCTGTAGGCCCCATTaGCTTGACACATGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: QWIPLDTCPSRDARALLLGCRPH*LDTCWQ
Trigger: CTGCCAACATGTGTCAAGCCAATGGGGCCTACAGCC...GAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGGTATCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp TCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGTGGGTTTTGCCGTGGCAAAGATATTTTaGAGTCTTTGTTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SFPAGPRRCTSTELVGFAVAKIF*SLCFSF
Trigger: GAAGGAGAAACAAAGACTCCAAAATATCTTTGCCAC...GGCAAAACCCACCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp CGTTGCAGAGGTTTATTGAGATCATTAACAGAGTGGAATTCAGCACCCGCCACAAAATCCCTGGTGGCTTaGGGCTTGAACTGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: RCRGLLRSLTEWNSAPATKSLVA*GLNCSR
Trigger: CCGGGAGCAGTTCAAGCCTCAAGCCACCAGGGATTT...TGTGGCGGGTGCTGAATTCCACTCTGTTAATGATCTCAATAAACCTCTGCAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp TTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGTGGCAGAAGGCTGGTCAAAGTCTAATGCCTTaGACAAATAAGCTTATCCCT +
Preference number: 4 (lower is better)
Translates to: LGYCRAVLCHHLTWQKAGQSLMP*TNKLIP
Trigger: AGGGATAAGCTTATTTGTTCAAGGCATTAGACTTTG...ACCAGCCTTCTGCCACGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp CAGATGCACAAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACGTTGTGGTATCTTGTTaGGACTTAGTTTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: QMHKHGAGGFCPRKVTRHVVVSC*DLVFTE
Trigger: CTCTGTGAAAACTAAGTCTCAACAAGATACCACAAC...GTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTTGTGCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp GCTGCTGAGTATGCCTTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGTTGCCACTTGAAATATaGAAACAGGTAGCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: AAEYALGYCRAVLCHHLTLPLEI*KQVARN
Trigger: GTTTCTAGCTACCTGTTTGCATATTTCAAGTGGCAA...CGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATACTCAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp GACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGGGATAATGAACCGTTaGAGAGGTTTATTGAGATCA +
Preference number: 4 (lower is better)
Translates to: DTCPSRDARALLLCGRGCGIMNR*RGLLRS
Trigger: TGATCTCAATAAACCTCTGCAACGGTTCATTATCCC...ACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp GACAAGGTGTCAGGTGACTCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGACTTTTAATCCTGAATaGACTGCTTGCCAGGTAAAT +
Preference number: 4 (lower is better)
Translates to: DKVSGDSFPAGPRRCTSTTFNPE*TACQVN
Trigger: ATTTACCTGGCAAGCAGTGCATTCAGGATTAAAAGT...CGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGAGTCACCTGACACCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp ATATGTTTTATTGGCCAGTTAATCATTGTGGTTGAATACTTGCCTAAGGCGGTAGGCTCCCGGAGGCGGTaGCCACTGCTTTACAGCCGC +
Preference number: 4 (lower is better)
Translates to: ICFIGQLIIVVEYLPKAVGSRRR*PLLYSR
Trigger: GCGGCTGTAAAGCAGTGGTCACCGCCTCCGGGAGCC...TACCGCCTTAGGCAAGTATTCAACCACAATGATTAACTGGCCAATAAAACATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249079.6
ENST00000403305.6
CDS-3UTR TCA 90 bp GACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTATAAGCTTATCCCTCTaGAAACAAAATGGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: DTCPSRDARALLLCGRGCISLSL*KQNGAC
Trigger: ACAAGCACCATTTTGTTTTCAGAGGGATAAGCTTAT...ACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp GTATGCCTTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGTGGCAGAACAAAGTCTAATGCCTTaGACAAATAAGCTTATCCCT +
Preference number: 4 (lower is better)
Translates to: VCLGVLQGSAMPPPDVAEQSLMP*TNKLIP
Trigger: AGGGATAAGCTTATTTGTTCAAGGCATTAGACTTTG...TTCTGCCACGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp CAGTGGATACCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCGTCACTACCTCCATCTaGTTCTGTGAAGCCATGGGA +
Preference number: 4 (lower is better)
Translates to: QWIPLDTCPSRDARALLLVTTSI*FCEAMG
Trigger: TCCCATGGCTTCACAGAAGCAGATGGAGGTAGTGAC...GAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGGTATCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp CAGTGGATACCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTCCATGATGTGGCGCTaGTGGATGTTCGTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: QWIPLDTCPSRDARALLLSMMWR*WMFVSL
Trigger: CAAACTGACGAACATCCAGCAGCGCCACATCATGGA...GAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGGTATCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249079.6
ENST00000403305.6
CDS-3UTR GCA 90 bp GTATGCCTTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGTGGCAGAATTGCCACTTGAAATATaGAAACAGGTAGCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: VCLGVLQGSAMPPPDVAELPLEI*KQVARN
Trigger: GTTTCTAGCTACCTGTTTGCATATTTCAAGTGGCAA...TTCTGCCACGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp GATTGGAACTCCCAGGCCAGGGCTCTAGGTCGCTCCCACCTTTTCATGTTTCTTGAGGTTGGTTCCCGTTaGCACTTGAAATATGCAAAC +
Preference number: 4 (lower is better)
Translates to: DWNSQARALGRSHLFMFLEVGSR*HLKYAN
Trigger: GTTTGCATATTTCAAGTGGCAACGGGAACCAACCTC...AAGAAACATGAAAAGGTGGGAGCGACCTAGAGCCCTGGCCTGGGAGTTCCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp CAGTGGATACCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCCCTGAATGCACTGCTTaGCAGGTAAATGCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: QWIPLDTCPSRDARALLLPECTA*QVNALG
Trigger: ACCAAGGGCATTTACCTGGCAAGCAGTGCATTCAGG...GAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGGTATCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CAGTGGATACCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCGGAACCCAGTTCCTTTaGTCACTACCTCCATCTGCT +
Preference number: 4 (lower is better)
Translates to: QWIPLDTCPSRDARALLLGTQFL*SLPPSA
Trigger: AGCAGATGGAGGTAGTGACCAAAGGAACTGGGTTCC...GAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGGTATCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp ACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGGTGGCAAAGATATTTTaGAGTCTTTGTTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: THVLVGMLGLCFSADGAVVAKIF*SLCFSF
Trigger: GAAGGAGAAACAAAGACTCCAAAATATCTTTGCCAC...CACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp AAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGAGTGGCAAAGATATTTTaGAGTCTTTGTTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: KHGAGGFCPRKVTRHMQGVAKIF*SLCFSF
Trigger: GAAGGAGAAACAAAGACTCCAAAATATCTTTGCCAC...TCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp GATTGGAACTCCCAGGCCAGGGCTCTAGGTCGCTCCCACCTTTTCATGTTTCTTTCCTCACTCCTTCTGTaGTCAATGTCTTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: DWNSQARALGRSHLFMFLSSLLL*SMSSIS
Trigger: GGAAATGGAAGACATTGACCACAGAAGGAGTGAGGA...AAGAAACATGAAAAGGTGGGAGCGACCTAGAGCCCTGGCCTGGGAGTTCCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp CAGTGGATACCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCGTTCCCGTTGCCACTTaGAATATGCAAACAGGTAGC +
Preference number: 4 (lower is better)
Translates to: QWIPLDTCPSRDARALLLVPVAT*NMQTGS
Trigger: GCTACCTGTTTGCATATTTCAAGTGGCAACGGGAAC...GAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGGTATCCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp GACTCCCTCCAGGTGCCCGAGACAAGGTTGATATTTCCAAAATATTTTGGTGATGGCTGGATGTTGGGCTaGACTGTAGGGGCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: DSLQVPETRLIFPKYFGDGWMLG*TVGAKH
Trigger: ATGCTTTGCCCCTACAGTGCAGCCCAACATCCAGCC...ATCACCAAAATATTTTGGAAATATCAACCTTGTCTCGGGCACCTGGAGGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp CAGTGGATACCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCATGGGCGAGGCTATTTaGTTGGAAGGTAAGACTCTC +
Preference number: 4 (lower is better)
Translates to: QWIPLDTCPSRDARALLLMGEAI*LEGKTL
Trigger: GAGAGTCTTACCTTCCAAGCAAATAGCCTCGCCCAT...GAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGGTATCCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp GAAATATGCAAACAGGTAGCTAGAAACCATCTGGGCTTGACAAAGTCTAATGCCGACTCAGTCAGCGCATaGGCACTTTCCCCGCTCTGT +
Preference number: 4 (lower is better)
Translates to: EICKQVARNHLGLTKSNADSVSA*ALSPLC
Trigger: ACAGAGCGGGGAAAGTGCGCATGCGCTGACTGAGTC...GGCATTAGACTTTGTCAAGCCCAGATGGTTTCTAGCTACCTGTTTGCATATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619227.4
CDS-3UTR CCA 90 bp ATATGTTTTATTGGCCAGTTAATCATTGTGGTTGAATACTTGCCTAAGGCGGTACTGGGCTGCTGGAGCTaGCAGCTAGCGCCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: ICFIGQLIIVVEYLPKAVLGCWS*QLAPLA
Trigger: AGCGAGAGGCGCTAGCTGCCAGCTCCAGCAGCCCAG...TACCGCCTTAGGCAAGTATTCAACCACAATGATTAACTGGCCAATAAAACATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249079.6
ENST00000403305.6
CDS-3UTR CCA 90 bp GACTCCCTCCAGGTGCCCGAGACAAGGTTGATATTTCCAAAATATTTTGGTGATACAGGTCAGAAGTGGTaGGAAGCAGGCCCAGTGGAT +
Preference number: 4 (lower is better)
Translates to: DSLQVPETRLIFPKYFGDTGQKW*EAGPVD
Trigger: ATCCACTGGGCCTGCTTCCCACCACTTCTGACCTGT...ATCACCAAAATATTTTGGAAATATCAACCTTGTCTCGGGCACCTGGAGGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp CAGTGGATACCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCATTTCCCGGAGTTTCTaGGAGATTTCAGCAAGGATG +
Preference number: 4 (lower is better)
Translates to: QWIPLDTCPSRDARALLLISRSF*EISARM
Trigger: CATCCTTGCTGAAATCTCCCAGAAACTCCGGGAAAT...GAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGGTATCCACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp ATATGTTTTATTGGCCAGTTAATCATTGTGGTTGAATACTTGCCTAAGGCGGTATGGTGGCTTGAGGCTTaGACTGCTCCCGGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: ICFIGQLIIVVEYLPKAVWWLEA*TAPGCR
Trigger: CCTACAGCCGGGAGCAGTTCAAGCCTCAAGCCACCA...TACCGCCTTAGGCAAGTATTCAACCACAATGATTAACTGGCCAATAAAACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp CAGGTCAGAAGTGGTGGGAAGCAGGCCCAGTGGATACCTTTAGACACATGTCCTATAAGCTTATCCCTCTaGAAACAAAATGGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: QVRSGGKQAQWIPLDTCPISLSL*KQNGAC
Trigger: ACAAGCACCATTTTGTTTTCAGAGGGATAAGCTTAT...AGGACATGTGTCTAAAGGTATCCACTGGGCCTGCTTCCCACCACTTCTGACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp GACTCCCTCCAGGTGCCCGAGACAAGGTTGATATTTCCAAAATATTTTGGTGATAGTGGGACAAGCAAATaGCAGAATACCGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: DSLQVPETRLIFPKYFGDSGTSK*QNTGEG
Trigger: GCCTTCTCCGGTATTCTGTCATTTGCTTGTCCCACT...ATCACCAAAATATTTTGGAAATATCAACCTTGTCTCGGGCACCTGGAGGGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp CGTTGCAGAGGTTTATTGAGATCATTAACAGAGTGGAATTCAGCACCCGCCACAGAAACTTGGGTCATGTaGCCTGATGGGATTATGGGA +
Preference number: 4 (lower is better)
Translates to: RCRGLLRSLTEWNSAPATETWVM*PDGIMG
Trigger: TCCCATAATCCCATCAGGTCACATGACCCAAGTTTC...TGTGGCGGGTGCTGAATTCCACTCTGTTAATGATCTCAATAAACCTCTGCAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp ATATGTTTTATTGGCCAGTTAATCATTGTGGTTGAATACTTGCCTAAGGCGGTAGGAGGCGGTGACCACTaGTTTACAGCCGCATCCGCA +
Preference number: 4 (lower is better)
Translates to: ICFIGQLIIVVEYLPKAVGGGDH*FTAASA
Trigger: TGCGGATGCGGCTGTAAAGCAGTGGTCACCGCCTCC...TACCGCCTTAGGCAAGTATTCAACCACAATGATTAACTGGCCAATAAAACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249079.6
ENST00000403305.6
CDS-3UTR GCA 90 bp GACTCCCTCCAGGTGCCCGAGACAAGGTTGATATTTCCAAAATATTTTGGTGATTCCATGATGTGGCGCTaGTGGATGTTCGTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: DSLQVPETRLIFPKYFGDSMMWR*WMFVSL
Trigger: CAAACTGACGAACATCCAGCAGCGCCACATCATGGA...ATCACCAAAATATTTTGGAAATATCAACCTTGTCTCGGGCACCTGGAGGGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403305.6
CDS-3UTR CCA 90 bp GAAATATGCAAACAGGTAGCTAGAAACCATCTGGGCTTGACAAAGTCTAATGCCGAAGGTAAGACTCTCTaGCTGGATGTTGGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: EICKQVARNHLGLTKSNAEGKTL*LDVGLH
Trigger: GTGCAGCCCAACATCCAGCCAGAGAGTCTTACCTTC...GGCATTAGACTTTGTCAAGCCCAGATGGTTTCTAGCTACCTGTTTGCATATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp ATATGTTTTATTGGCCAGTTAATCATTGTGGTTGAATACTTGCCTAAGGCGGTATTCCTCGGTACTGTTTaGCCTGTCCCAGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: ICFIGQLIIVVEYLPKAVFLGTV*PVPGPP
Trigger: TGGAGGCCCTGGGACAGGGCAAACAGTACCGAGGAA...TACCGCCTTAGGCAAGTATTCAACCACAATGATTAACTGGCCAATAAAACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp GAAATATGCAAACAGGTAGCTAGAAACCATCTGGGCTTGACAAAGTCTAATGCCATGATGTCCATGATGTaGCGCTGCTGGATGTTCGTC +
Preference number: 4 (lower is better)
Translates to: EICKQVARNHLGLTKSNAMMSMM*RCWMFV
Trigger: GACGAACATCCAGCAGCGCCACATCATGGACATCAT...GGCATTAGACTTTGTCAAGCCCAGATGGTTTCTAGCTACCTGTTTGCATATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249079.6
ENST00000403305.6
CDS-3UTR CCA 90 bp GAAATATGCAAACAGGTAGCTAGAAACCATCTGGGCTTGACAAAGTCTAATGCCGCGAGGCTATTTGCTTaGAAGGTAAGACTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: EICKQVARNHLGLTKSNAARLFA*KVRLSG
Trigger: GCCAGAGAGTCTTACCTTCCAAGCAAATAGCCTCGC...GGCATTAGACTTTGTCAAGCCCAGATGGTTTCTAGCTACCTGTTTGCATATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp ATATGTTTTATTGGCCAGTTAATCATTGTGGTTGAATACTTGCCTAAGGCGGTAAGGAGTGGACTCCAGTaGTCGAGCTTGGGCTACCCT +
Preference number: 4 (lower is better)
Translates to: ICFIGQLIIVVEYLPKAVRSGLQ*SSLGYP
Trigger: AGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCT...TACCGCCTTAGGCAAGTATTCAACCACAATGATTAACTGGCCAATAAAACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp ATATGTTTTATTGGCCAGTTAATCATTGTGGTTGAATACTTGCCTAAGGCGGTACTGCTGAGTATGCCTTaGGGTACTGCAGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: ICFIGQLIIVVEYLPKAVLLSMP*GTAGQC
Trigger: GCACTGCCCTGCAGTACCCCAAGGCATACTCAGCAG...TACCGCCTTAGGCAAGTATTCAACCACAATGATTAACTGGCCAATAAAACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp GACTCCCTCCAGGTGCCCGAGACAAGGTTGATATTTCCAAAATATTTTGGTGATATTTCCCGGAGTTTCTaGGAGATTTCAGCAAGGATG +
Preference number: 4 (lower is better)
Translates to: DSLQVPETRLIFPKYFGDISRSF*EISARM
Trigger: CATCCTTGCTGAAATCTCCCAGAAACTCCGGGAAAT...ATCACCAAAATATTTTGGAAATATCAACCTTGTCTCGGGCACCTGGAGGGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR CAA 72 bp TTTCACAGAGGGATAATGAACCGTTGCAGAGGTTTATaGAGATCATTAACAGAGTGGAATTCAGCACCCGCC +
Preference number: 4 (lower is better)
Translates to: FHRGIMNRCRGL*RSLTEWNSAPA
Trigger: GGCGGGTGCTGAATTCCACTCTGTTAATGATCTCAATAAACCTCTGCAACGGTTCATTATCCCTCTGTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
3UTR CAA 72 bp ACTGCTTGCCAGGTAAATGCCCTTGGTTGTGGTATCTaGTTGAGACTTAGTTTTCACAGAGGGATAATGAAC +
Preference number: 4 (lower is better)
Translates to: TACQVNALGCGI*LRLSFHRGIMN
Trigger: GTTCATTATCCCTCTGTGAAAACTAAGTCTCAACAAGATACCACAACCAAGGGCATTTACCTGGCAAGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp CGTTGCAGAGGTTTATTGAGATCATTAACAGAGTGGAATTCAGCACCCGCCACACAAAGTCTAATGCCTTaGACAAATAAGCTTATCCCT +
Preference number: 4 (lower is better)
Translates to: RCRGLLRSLTEWNSAPATQSLMP*TNKLIP
Trigger: AGGGATAAGCTTATTTGTTCAAGGCATTAGACTTTG...TGTGGCGGGTGCTGAATTCCACTCTGTTAATGATCTCAATAAACCTCTGCAACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CCA 90 bp ATATGTTTTATTGGCCAGTTAATCATTGTGGTTGAATACTTGCCTAAGGCGGTAGCGAGGCTATTTGCTTaGAAGGTAAGACTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ICFIGQLIIVVEYLPKAVARLFA*KVRLSG
Trigger: GCCAGAGAGTCTTACCTTCCAAGCAAATAGCCTCGC...TACCGCCTTAGGCAAGTATTCAACCACAATGATTAACTGGCCAATAAAACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp GAAATATGCAAACAGGTAGCTAGAAACCATCTGGGCTTGACAAAGTCTAATGCCGGGATAATGAACCGTTaGAGAGGTTTATTGAGATCA +
Preference number: 4 (lower is better)
Translates to: EICKQVARNHLGLTKSNAGIMNR*RGLLRS
Trigger: TGATCTCAATAAACCTCTGCAACGGTTCATTATCCC...GGCATTAGACTTTGTCAAGCCCAGATGGTTTCTAGCTACCTGTTTGCATATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR GCA 90 bp GAAATATGCAAACAGGTAGCTAGAAACCATCTGGGCTTGACAAAGTCTAATGCCACTTTTAATCCTGAATaGACTGCTTGCCAGGTAAAT +
Preference number: 4 (lower is better)
Translates to: EICKQVARNHLGLTKSNATFNPE*TACQVN
Trigger: ATTTACCTGGCAAGCAGTGCATTCAGGATTAAAAGT...GGCATTAGACTTTGTCAAGCCCAGATGGTTTCTAGCTACCTGTTTGCATATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR TCA 90 bp ATATGTTTTATTGGCCAGTTAATCATTGTGGTTGAATACTTGCCTAAGGCGGTAACAGTACCCACTGAGTaGTATGCCAAAATTGAAATT +
Preference number: 4 (lower is better)
Translates to: ICFIGQLIIVVEYLPKAVTVPTE*YAKIEI
Trigger: AATTTCAATTTTGGCATATCACTCAGTGGGTACTGT...TACCGCCTTAGGCAAGTATTCAACCACAATGATTAACTGGCCAATAAAACATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249079.6
CDS-3UTR TCA 90 bp ATATGTTTTATTGGCCAGTTAATCATTGTGGTTGAATACTTGCCTAAGGCGGTAATAAGCTTATCCCTCTaGAAACAAAATGGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: ICFIGQLIIVVEYLPKAVISLSL*KQNGAC
Trigger: ACAAGCACCATTTTGTTTTCAGAGGGATAAGCTTAT...TACCGCCTTAGGCAAGTATTCAACCACAATGATTAACTGGCCAATAAAACATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS GCA 90 bp CTCCCGGAGGCGGTGACCACTGCTTTACAGCCGCATCCGCACCGGTaGCACGCAGAAATACTGCGCGATCTGGGCTGCTGGAGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: LPEAVTTALQPHPHR*HAEILRDLGCWSWQ
Trigger: CTGCCAGCTCCAGCAGCCCAGATCGCGCAGTATTTCTGCGTGGCACCGGTGCGGATGCGGCTGTAAAGCAGTGGTCACCGCCTCCGGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249079.6
ENST00000403305.6
CDS-3UTR CAA 90 bp CCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTTGGGCTACCCTGCCCGTATTCCTCGGTACTGTTaGCCCTGTCCCAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: PAWQRSGLQWSSLGYPARIPRYC*PCPRAS
Trigger: GGAGGCCCTGGGACAGGGCAAACAGTACCGAGGAAT...ACGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS TCA 90 bp TCTGGGTGCTCCCCTCTCCACATAGAAGTGGGCTCCCGGAGGCGGTaGCCACTGCTTTACAGCCGCATCCGCACCGGTGCCACGCAGAAA +
Preference number: 5 (lower is better)
Translates to: SGCSPLHIEVGSRRR*PLLYSRIRTGATQK
Trigger: TTTCTGCGTGGCACCGGTGCGGATGCGGCTGTAAAGCAGTGGTCACCGCCTCCGGGAGCCCACTTCTATGTGGAGAGGGGAGCACCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249079.6
ENST00000403305.6
CDS-3UTR CAA 90 bp CACCACCTGACGTGGCAGAAGGCTGGTAGGATGGGCTGGCCTGAGGATGGCCCTATTCCTCGGTACTGTTaGCCCTGTCCCAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: HHLTWQKAGRMGWPEDGPIPRYC*PCPRAS
Trigger: GGAGGCCCTGGGACAGGGCAAACAGTACCGAGGAAT...AGGGCCATCCTCAGGCCAGCCCATCCTACCAGCCTTCTGCCACGTCAGGTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp TTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGTGGCAGAAGGCTGGTCTCCAGTGGTCGAGCTaGGGCTACCCTGCCCGTCTC +
Preference number: 5 (lower is better)
Translates to: LGYCRAVLCHHLTWQKAGLQWSS*GYPARL
Trigger: GAGACGGGCAGGGTAGCCCAAGCTCGACCACTGGAG...ACCAGCCTTCTGCCACGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp CACCACCTGACGTGGCAGAAGGCTGGTAGGATGGGCTGGCCTGAGGATGGCCCTGCTGCTGAGTATGCCTaGGGGTACTGCAGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: HHLTWQKAGRMGWPEDGPAAEYA*GYCRAV
Trigger: CACTGCCCTGCAGTACCCCAAGGCATACTCAGCAGC...AGGGCCATCCTCAGGCCAGCCCATCCTACCAGCCTTCTGCCACGTCAGGTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp AACAGAGTGGAATTCAGCACCCGCCACAGCAGCCAGCCATGGGGTGCCCAAGAGAGGGATGCTCGGGCTTaGCTTCTCTGCGGACGGGGC +
Preference number: 5 (lower is better)
Translates to: NRVEFSTRHSSQPWGAQERDARA*LLCGRG
Trigger: GCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCT...CTCTTGGGCACCCCATGGCTGGCTGCTGTGGCGGGTGCTGAATTCCACTCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp AGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGAGTCTCAGAGGCGGCACATGCAGGGATaGGAACTCCCAGGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: SRDARALLLCGRGCESQRRHMQG*ELPGQG
Trigger: GCCCTGGCCTGGGAGTTCCAATCCCTGCATGTGCCG...CCTCTGAGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS GCA 90 bp TTGGGGCGGCGCCGGAACCCAGTTCCTTTGGTCACTACCTCCATCTaGTTCTGTGAAGCCATGGGAGGACTCCAGCGCCTGTGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: LGRRRNPVPLVTTSI*FCEAMGGLQRLWQG
Trigger: TCCCTGCCACAGGCGCTGGAGTCCTCCCATGGCTTCACAGAAGCAGATGGAGGTAGTGACCAAAGGAACTGGGTTCCGGCGCCGCCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249079.6
CDS CCA 90 bp CAGGCCGGAGGTGGGGACGGGCTGCGAGGATGGGAGGCAGGTAGATaGGCGAGGCTATTTGCTTGGAAGGTAAGACTCTCTGGCTGGATG +
Preference number: 5 (lower is better)
Translates to: QAGGGDGLRGWEAGR*ARLFAWKVRLSGWM
Trigger: CATCCAGCCAGAGAGTCTTACCTTCCAAGCAAATAGCCTCGCCCATCTACCTGCCTCCCATCCTCGCAGCCCGTCCCCACCTCCGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249079.6
ENST00000403026.5
ENST00000403305.6
ENST00000418863.5
ENST00000422191.1
ENST00000619227.4
CDS-3UTR CAA 90 bp TGTCAGGTGACTCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGGTAGGCCCCATTGGCTaGACACATGTTGGCAGGCCG +
Preference number: 5 (lower is better)
Translates to: CQVTPSQQGLADAQARSWVGPIG*THVGRP
Trigger: CGGCCTGCCAACATGTGTCAAGCCAATGGGGCCTAC...CCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGAGTCACCTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp GGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGATTGGAACTCCCAGGCCCTCCAGTGGTCGAGCTaGGGCTACCCTGCCCGTCTC +
Preference number: 5 (lower is better)
Translates to: GFAQERSRGTCRDWNSQALQWSS*GYPARL
Trigger: GAGACGGGCAGGGTAGCCCAAGCTCGACCACTGGAG...GGCCTGGGAGTTCCAATCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp GTATGCCTTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGTGGCAGAAAGGGATGCTCGGGCTTaGCTTCTCTGCGGACGGGGC +
Preference number: 5 (lower is better)
Translates to: VCLGVLQGSAMPPPDVAERDARA*LLCGRG
Trigger: GCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCT...TTCTGCCACGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp AAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGACGGCACATGCAGGGATaGGAACTCCCAGGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: KHGAGGFCPRKVTRHMQGRHMQG*ELPGQG
Trigger: GCCCTGGCCTGGGAGTTCCAATCCCTGCATGTGCCG...TCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS CCA 90 bp AGGATGGCCCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTTaGGCTACCCTGCCCGTCTCTGGAGACAGATTAAGTGGTGGCAAG +
Preference number: 5 (lower is better)
Translates to: RMALPGRGVDSSGRA*ATLPVSGDRLSGGK
Trigger: CTTGCCACCACTTAATCTGTCTCCAGAGACGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGGGCCATCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp TTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGTGGCAGAAGGCTGGTGTAGGCCCCATTGGCTaGACACATGTTGGCAGGCCG +
Preference number: 5 (lower is better)
Translates to: LGYCRAVLCHHLTWQKAGVGPIG*THVGRP
Trigger: CGGCCTGCCAACATGTGTCAAGCCAATGGGGCCTAC...ACCAGCCTTCTGCCACGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp AACAGAGTGGAATTCAGCACCCGCCACAGCAGCCAGCCATGGGGTGCCCAAGAGGCTGCTGAGTATGCCTaGGGGTACTGCAGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: NRVEFSTRHSSQPWGAQEAAEYA*GYCRAV
Trigger: CACTGCCCTGCAGTACCCCAAGGCATACTCAGCAGC...CTCTTGGGCACCCCATGGCTGGCTGCTGTGGCGGGTGCTGAATTCCACTCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS GCA 90 bp TTGGGGCGGCGCCGGAACCCAGTTCCTTTGGTCACTACCTCCATCTaGTTCTGTGAAGCCATGGGAGGACTCAGTCAGCGCATGCGCACT +
Preference number: 5 (lower is better)
Translates to: LGRRRNPVPLVTTSI*FCEAMGGLSQRMRT
Trigger: AGTGCGCATGCGCTGACTGAGTCCTCCCATGGCTTCACAGAAGCAGATGGAGGTAGTGACCAAAGGAACTGGGTTCCGGCGCCGCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403026.5
ENST00000619227.4
CDS-3UTR CAA 90 bp CTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGAGTCTCAGAATTCCTCGGTACTGTTaGCCCTGTCCCAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: LVGMLGLCFSADGAVSLRIPRYC*PCPRAS
Trigger: GGAGGCCCTGGGACAGGGCAAACAGTACCGAGGAAT...TCTGAGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp GACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTCGGAGCTGGTGGGTTTaGCCCAAGAAAGGTCACGCG +
Preference number: 5 (lower is better)
Translates to: DTCPSRDARALLLCGRGCRSWWV*PKKGHA
Trigger: CGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCG...ACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS GCA 90 bp TTGGGGCGGCGCCGGAACCCAGTTCCTTTGGTCACTACCTCCATCTaGTTCTGTGAAGCCATGGGAGGACTCCTAAGACCCTCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: LGRRRNPVPLVTTSI*FCEAMGGLLRPSLG
Trigger: ACCCAGAGAGGGTCTTAGGAGTCCTCCCATGGCTTCACAGAAGCAGATGGAGGTAGTGACCAAAGGAACTGGGTTCCGGCGCCGCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403305.6
CDS GCA 90 bp TTGGGGCGGCGCCGGAACCCAGTTCCTTTGGTCACTACCTCCATCTaGTTCTGTGAAGCCATGGGAGGACTCGGTGCCACGCAGAAATAC +
Preference number: 5 (lower is better)
Translates to: LGRRRNPVPLVTTSI*FCEAMGGLGATQKY
Trigger: GTATTTCTGCGTGGCACCGAGTCCTCCCATGGCTTCACAGAAGCAGATGGAGGTAGTGACCAAAGGAACTGGGTTCCGGCGCCGCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418863.5
CDS CCA 90 bp GGGCTGCGAGGATGGGAGGCAGGTAGATGGGCGAGGCTATTTGCTTaGAAGGTAAGACTCTCTGGCTGGATGTTGGGCTGCACTGTAGGG +
Preference number: 5 (lower is better)
Translates to: GLRGWEAGRWARLFA*KVRLSGWMLGCTVG
Trigger: CCCTACAGTGCAGCCCAACATCCAGCCAGAGAGTCTTACCTTCCAAGCAAATAGCCTCGCCCATCTACCTGCCTCCCATCCTCGCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249079.6
ENST00000403026.5
ENST00000403305.6
ENST00000418863.5
ENST00000422191.1
ENST00000619227.4
CDS TCA 90 bp GCCCAACACCCCCAGAAGTCTGGAAGCGGGGATCGAGCCAGAGAATaGTGCCGCCAGTTAATATTGCGACAGTGCCCAAACCTCCCATCC +
Preference number: 5 (lower is better)
Translates to: AQHPQKSGSGDRARE*CRQLILRQCPNLPS
Trigger: GGATGGGAGGTTTGGGCACTGTCGCAATATTAACTGGCGGCATCATTCTCTGGCTCGATCCCCGCTTCCAGACTTCTGGGGGTGTTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422191.1
CDS-3UTR CAA 90 bp GGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGATTGGAACTCCCAGGCCCGGAACCCAGTTCCTTaGGTCACTACCTCCATCTGC +
Preference number: 5 (lower is better)
Translates to: GFAQERSRGTCRDWNSQARNPVP*VTTSIC
Trigger: GCAGATGGAGGTAGTGACCAAAGGAACTGGGTTCCG...GGCCTGGGAGTTCCAATCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp GCTGCTGAGTATGCCTTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGGGCGAGGCTATTTGCTaGGAAGGTAAGACTCTCTGG +
Preference number: 5 (lower is better)
Translates to: AAEYALGYCRAVLCHHLTGEAIC*EGKTLW
Trigger: CCAGAGAGTCTTACCTTCCAAGCAAATAGCCTCGCC...CGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAAGGCATACTCAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS TCA 90 bp AACCTCCCATCCAGACACACAGATACACACACACAGTCCTCATTCTaGCCCAGCGCCTGTGGCAGGGAAGTCTCCTCGGGAGGGAGTGTT +
Preference number: 5 (lower is better)
Translates to: NLPSRHTDTHTQSSF*PSACGREVSSGGSV
Trigger: AACACTCCCTCCCGAGGAGACTTCCCTGCCACAGGCGCTGGGTCAGAATGAGGACTGTGTGTGTGTATCTGTGTGTCTGGATGGGAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422191.1
CDS-3UTR CAA 90 bp AAGCACGGAGCTGGTGGGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGAGGCGAGGCTATTTGCTaGGAAGGTAAGACTCTCTGG +
Preference number: 5 (lower is better)
Translates to: KHGAGGFCPRKVTRHMQGGEAIC*EGKTLW
Trigger: CCAGAGAGTCTTACCTTCCAAGCAAATAGCCTCGCC...TCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp CAGGTCAGAAGTGGTGGGAAGCAGGCCCAGTGGATACCTTTAGACACATGTCCTCGGAGCTGGTGGGTTTaGCCCAAGAAAGGTCACGCG +
Preference number: 5 (lower is better)
Translates to: QVRSGGKQAQWIPLDTCPRSWWV*PKKGHA
Trigger: CGCGTGACCTTTCTTGGGCAAAACCCACCAGCTCCG...AGGACATGTGTCTAAAGGTATCCACTGGGCCTGCTTCCCACCACTTCTGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp CAGGTCAGAAGTGGTGGGAAGCAGGCCCAGTGGATACCTTTAGACACATGTCCTCGGAACCCAGTTCCTTaGGTCACTACCTCCATCTGC +
Preference number: 5 (lower is better)
Translates to: QVRSGGKQAQWIPLDTCPRNPVP*VTTSIC
Trigger: GCAGATGGAGGTAGTGACCAAAGGAACTGGGTTCCG...AGGACATGTGTCTAAAGGTATCCACTGGGCCTGCTTCCCACCACTTCTGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp CAGTGGATACCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCGTAGGCCCCATTGGCTaGACACATGTTGGCAGGCCG +
Preference number: 5 (lower is better)
Translates to: QWIPLDTCPSRDARALLLVGPIG*THVGRP
Trigger: CGGCCTGCCAACATGTGTCAAGCCAATGGGGCCTAC...GAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGGTATCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp GACAAGGTGTCAGGTGACTCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGAGAGGTTGGTTCCCGTaGCCACTTGAAATATGCAAA +
Preference number: 5 (lower is better)
Translates to: DKVSGDSFPAGPRRCTSTRGWFP*PLEICK
Trigger: TTTGCATATTTCAAGTGGCAACGGGAACCAACCTCT...CGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGAGTCACCTGACACCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp TCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGTGGGTTTTGCCCAAGCGTTGCAGAGGTTTATaGAGATCATTAACAGAGTGG +
Preference number: 5 (lower is better)
Translates to: SQQGLADAQARSWWVLPKRCRGL*RSLTEW
Trigger: CCACTCTGTTAATGATCTCAATAAACCTCTGCAACG...CTTGGGCAAAACCCACCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp TCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGTGGGTTTTGCCAGGGATAATGAACCGTaGCAGAGGTTTATTGAGATC +
Preference number: 5 (lower is better)
Translates to: SFPAGPRRCTSTELVGFARDNEP*QRFIEI
Trigger: GATCTCAATAAACCTCTGCAACGGTTCATTATCCCT...GGCAAAACCCACCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp TGTCAGGTGACTCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGATTGTGGTTGAATACTaGCCTAAGGCGGTAAGAAAT +
Preference number: 5 (lower is better)
Translates to: CQVTPSQQGLADAQARSWIVVEY*PKAVRN
Trigger: ATTTCTTACCGCCTTAGGCAAGTATTCAACCACAAT...CCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGAGTCACCTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp GACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTAGAAACCATCTGGGCTaGACAAAGTCTAATGCCTTG +
Preference number: 5 (lower is better)
Translates to: DTCPSRDARALLLCGRGCRNHLG*TKSNAL
Trigger: CAAGGCATTAGACTTTGTCAAGCCCAGATGGTTTCT...ACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp TGTCAGGTGACTCCTTCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGGGTTGTGGTATCTTGTaGAGACTTAGTTTTCACAGA +
Preference number: 5 (lower is better)
Translates to: CQVTPSQQGLADAQARSWGCGIL*RLSFHR
Trigger: TCTGTGAAAACTAAGTCTCAACAAGATACCACAACC...CCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGAAGGAGTCACCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp GGTTTTGCCCAAGAAAGGTCACGCGGCACATGCAGGGATTGGAACTCCCAGGCCGGTAAATGCCCTTGGTaGTGGTATCTTGTTGAGACT +
Preference number: 5 (lower is better)
Translates to: GFAQERSRGTCRDWNSQAGKCPW*WYLVET
Trigger: AGTCTCAACAAGATACCACAACCAAGGGCATTTACC...GGCCTGGGAGTTCCAATCCCTGCATGTGCCGCGTGACCTTTCTTGGGCAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp GAAATATGCAAACAGGTAGCTAGAAACCATCTGGGCTTGACAAAGTCTAATGCCCTCCAGTGGTCGAGCTaGGGCTACCCTGCCCGTCTC +
Preference number: 5 (lower is better)
Translates to: EICKQVARNHLGLTKSNALQWSS*GYPARL
Trigger: GAGACGGGCAGGGTAGCCCAAGCTCGACCACTGGAG...GGCATTAGACTTTGTCAAGCCCAGATGGTTTCTAGCTACCTGTTTGCATATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp GAAATATGCAAACAGGTAGCTAGAAACCATCTGGGCTTGACAAAGTCTAATGCCAGGGATGCTCGGGCTTaGCTTCTCTGCGGACGGGGC +
Preference number: 5 (lower is better)
Translates to: EICKQVARNHLGLTKSNARDARA*LLCGRG
Trigger: GCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCT...GGCATTAGACTTTGTCAAGCCCAGATGGTTTCTAGCTACCTGTTTGCATATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp TTGGGGTACTGCAGGGCAGTGCTATGCCACCACCTGACGTGGCAGAAGGCTGGTCTTGGTTGTGGTATCTaGTTGAGACTTAGTTTTCAC +
Preference number: 5 (lower is better)
Translates to: LGYCRAVLCHHLTWQKAGLGCGI*LRLSFH
Trigger: GTGAAAACTAAGTCTCAACAAGATACCACAACCAAG...ACCAGCCTTCTGCCACGTCAGGTGGTGGCATAGCACTGCCCTGCAGTACCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp TCCCAGCAGGGCCTCGCAGATGCACAAGCACGGAGCTGGTGGGTTTTGCCCAAGGTGCCCGAGACAAGGTaGATATTTCCAAAATATTTT +
Preference number: 5 (lower is better)
Translates to: SQQGLADAQARSWWVLPKVPETR*IFPKYF
Trigger: AAAATATTTTGGAAATATCAACCTTGTCTCGGGCAC...CTTGGGCAAAACCCACCAGCTCCGTGCTTGTGCATCTGCGAGGCCCTGCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp CAGTGGATACCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCGGCGAGGCTATTTGCTaGGAAGGTAAGACTCTCTGG +
Preference number: 5 (lower is better)
Translates to: QWIPLDTCPSRDARALLLGEAIC*EGKTLW
Trigger: CCAGAGAGTCTTACCTTCCAAGCAAATAGCCTCGCC...GAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGGTATCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp CTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGAGTCTCAGAATTGTGGTTGAATACTaGCCTAAGGCGGTAAGAAAT +
Preference number: 5 (lower is better)
Translates to: LVGMLGLCFSADGAVSLRIVVEY*PKAVRN
Trigger: ATTTCTTACCGCCTTAGGCAAGTATTCAACCACAAT...TCTGAGACTCACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp GAAATATGCAAACAGGTAGCTAGAAACCATCTGGGCTTGACAAAGTCTAATGCCGCTGCTGAGTATGCCTaGGGGTACTGCAGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: EICKQVARNHLGLTKSNAAAEYA*GYCRAV
Trigger: CACTGCCCTGCAGTACCCCAAGGCATACTCAGCAGC...GGCATTAGACTTTGTCAAGCCCAGATGGTTTCTAGCTACCTGTTTGCATATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp CAGGTCAGAAGTGGTGGGAAGCAGGCCCAGTGGATACCTTTAGACACATGTCCTAGAAACCATCTGGGCTaGACAAAGTCTAATGCCTTG +
Preference number: 5 (lower is better)
Translates to: QVRSGGKQAQWIPLDTCPRNHLG*TKSNAL
Trigger: CAAGGCATTAGACTTTGTCAAGCCCAGATGGTTTCT...AGGACATGTGTCTAAAGGTATCCACTGGGCCTGCTTCCCACCACTTCTGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp ACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCTGCGGACGGGGCTGTGGTGCCCGAGACAAGGTaGATATTTCCAAAATATTTT +
Preference number: 5 (lower is better)
Translates to: THVLVGMLGLCFSADGAVVPETR*IFPKYF
Trigger: AAAATATTTTGGAAATATCAACCTTGTCTCGGGCAC...CACAGCCCCGTCCGCAGAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS CCA 90 bp CCTGTGGCAGGGAAGTCTCCTCGGGAGGGAGTGTTAACACAGCCATaGTCACAACAGTACCCACTGAGTGATATGCCAAAATTGAAATTT +
Preference number: 5 (lower is better)
Translates to: PVAGKSPREGVLTQP*SQQYPLSDMPKLKF
Trigger: AAATTTCAATTTTGGCATATCACTCAGTGGGTACTGTTGTGACCATGGCTGTGTTAACACTCCCTCCCGAGGAGACTTCCCTGCCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249079.6
ENST00000422191.1
CDS-3UTR CAA 90 bp CAGGTCAGAAGTGGTGGGAAGCAGGCCCAGTGGATACCTTTAGACACATGTCCTTGGATGTTCGTCAGTTaGGATTCCTTCATCATCACT +
Preference number: 5 (lower is better)
Translates to: QVRSGGKQAQWIPLDTCPWMFVS*DSFIIT
Trigger: AGTGATGATGAAGGAATCCAAACTGACGAACATCCA...AGGACATGTGTCTAAAGGTATCCACTGGGCCTGCTTCCCACCACTTCTGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249079.6
ENST00000403305.6
CDS-3UTR CAA 90 bp AAACCGAAACTTGGGTCATGTGACCTGATGGGATTATGGGACTCCCTCCAGGTGAGAAACCATCTGGGCTaGACAAAGTCTAATGCCTTG +
Preference number: 5 (lower is better)
Translates to: KPKLGSCDLMGLWDSLQVRNHLG*TKSNAL
Trigger: CAAGGCATTAGACTTTGTCAAGCCCAGATGGTTTCT...CACCTGGAGGGAGTCCCATAATCCCATCAGGTCACATGACCCAAGTTTCGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp CAGGTCAGAAGTGGTGGGAAGCAGGCCCAGTGGATACCTTTAGACACATGTCCTAGGGATAATGAACCGTaGCAGAGGTTTATTGAGATC +
Preference number: 5 (lower is better)
Translates to: QVRSGGKQAQWIPLDTCPRDNEP*QRFIEI
Trigger: GATCTCAATAAACCTCTGCAACGGTTCATTATCCCT...AGGACATGTGTCTAAAGGTATCCACTGGGCCTGCTTCCCACCACTTCTGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp GAAATATGCAAACAGGTAGCTAGAAACCATCTGGGCTTGACAAAGTCTAATGCCCGGAACCCAGTTCCTTaGGTCACTACCTCCATCTGC +
Preference number: 5 (lower is better)
Translates to: EICKQVARNHLGLTKSNARNPVP*VTTSIC
Trigger: GCAGATGGAGGTAGTGACCAAAGGAACTGGGTTCCG...GGCATTAGACTTTGTCAAGCCCAGATGGTTTCTAGCTACCTGTTTGCATATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp CAGTGGATACCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCAGAGGTTGGTTCCCGTaGCCACTTGAAATATGCAAA +
Preference number: 5 (lower is better)
Translates to: QWIPLDTCPSRDARALLLRGWFP*PLEICK
Trigger: TTTGCATATTTCAAGTGGCAACGGGAACCAACCTCT...GAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGGTATCCACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp GATTGGAACTCCCAGGCCAGGGCTCTAGGTCGCTCCCACCTTTTCATGTTTCTTGGTTGTGGTATCTTGTaGAGACTTAGTTTTCACAGA +
Preference number: 5 (lower is better)
Translates to: DWNSQARALGRSHLFMFLGCGIL*RLSFHR
Trigger: TCTGTGAAAACTAAGTCTCAACAAGATACCACAACC...AAGAAACATGAAAAGGTGGGAGCGACCTAGAGCCCTGGCCTGGGAGTTCCAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp CAGTGGATACCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCCGTTGCAGAGGTTTATaGAGATCATTAACAGAGTGG +
Preference number: 5 (lower is better)
Translates to: QWIPLDTCPSRDARALLLRCRGL*RSLTEW
Trigger: CCACTCTGTTAATGATCTCAATAAACCTCTGCAACG...GAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGGTATCCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp AAACCGAAACTTGGGTCATGTGACCTGATGGGATTATGGGACTCCCTCCAGGTGCTTGGTTGTGGTATCTaGTTGAGACTTAGTTTTCAC +
Preference number: 5 (lower is better)
Translates to: KPKLGSCDLMGLWDSLQVLGCGI*LRLSFH
Trigger: GTGAAAACTAAGTCTCAACAAGATACCACAACCAAG...CACCTGGAGGGAGTCCCATAATCCCATCAGGTCACATGACCCAAGTTTCGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp CAGTGGATACCTTTAGACACATGTCCTAGTAGGGATGCTCGGGCTTTGCTTCTCATTGTGGTTGAATACTaGCCTAAGGCGGTAAGAAAT +
Preference number: 5 (lower is better)
Translates to: QWIPLDTCPSRDARALLLIVVEY*PKAVRN
Trigger: ATTTCTTACCGCCTTAGGCAAGTATTCAACCACAAT...GAGAAGCAAAGCCCGAGCATCCCTACTAGGACATGTGTCTAAAGGTATCCACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp CGTTGCAGAGGTTTATTGAGATCATTAACAGAGTGGAATTCAGCACCCGCCACAGGTAAATGCCCTTGGTaGTGGTATCTTGTTGAGACT +
Preference number: 5 (lower is better)
Translates to: RCRGLLRSLTEWNSAPATGKCPW*WYLVET
Trigger: AGTCTCAACAAGATACCACAACCAAGGGCATTTACC...TGTGGCGGGTGCTGAATTCCACTCTGTTAATGATCTCAATAAACCTCTGCAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp GAAATATGCAAACAGGTAGCTAGAAACCATCTGGGCTTGACAAAGTCTAATGCCAGAGGTTGGTTCCCGTaGCCACTTGAAATATGCAAA +
Preference number: 5 (lower is better)
Translates to: EICKQVARNHLGLTKSNARGWFP*PLEICK
Trigger: TTTGCATATTTCAAGTGGCAACGGGAACCAACCTCT...GGCATTAGACTTTGTCAAGCCCAGATGGTTTCTAGCTACCTGTTTGCATATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS-3UTR CAA 90 bp GAAATATGCAAACAGGTAGCTAGAAACCATCTGGGCTTGACAAAGTCTAATGCCAGTGATATGCCAAAATaGAAATTTCACCCTAAGACC +
Preference number: 5 (lower is better)
Translates to: EICKQVARNHLGLTKSNASDMPK*KFHPKT
Trigger: GGTCTTAGGGTGAAATTTCAATTTTGGCATATCACT...GGCATTAGACTTTGTCAAGCCCAGATGGTTTCTAGCTACCTGTTTGCATATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249079.6
CDS CCA 72 bp GCTCCCGGCTGTAGGCCCCATTGGCTTGACACATGTTaGCAGGCCGGAGGTGGGGACGGGCTGCGAGGATGG +
Preference number: 6 (lower is better)
Translates to: APGCRPHWLDTC*QAGGGDGLRGW
Trigger: CCATCCTCGCAGCCCGTCCCCACCTCCGGCCTGCCAACATGTGTCAAGCCAATGGGGCCTACAGCCGGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000249079.6
ENST00000403026.5
ENST00000403305.6
ENST00000418863.5
ENST00000422191.1
ENST00000619227.4
CDS TCA 72 bp TCCCCTCTCCACATAGAAGTGGGCTCCCGGAGGCGGTaGCCACTGCTTTACAGCCGCATCCGCACCGGTGCC +
Preference number: 6 (lower is better)
Translates to: SPLHIEVGSRRR*PLLYSRIRTGA
Trigger: GGCACCGGTGCGGATGCGGCTGTAAAGCAGTGGTCACCGCCTCCGGGAGCCCACTTCTATGTGGAGAGGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000422191.1
CDS GCA 72 bp GCGGTGACCACTGCTTTACAGCCGCATCCGCACCGGTaGCACGCAGAAATACTGCGCGATCTGGGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: AVTTALQPHPHR*HAEILRDLGCW
Trigger: CCAGCAGCCCAGATCGCGCAGTATTTCTGCGTGGCACCGGTGCGGATGCGGCTGTAAAGCAGTGGTCACCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249079.6
ENST00000403305.6
CDS CAA 90 bp GAGGATGGCCCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTaGGGCTACCCTGCCCGTCTCTGGAGACAGATTAAGTGGTGGCAA +
Preference number: 6 (lower is better)
Translates to: EDGPAWQRSGLQWSS*GYPARLWRQIKWWQ
Trigger: TTGCCACCACTTAATCTGTCTCCAGAGACGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGGGCCATCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS CAA 72 bp CCTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTaGGGCTACCCTGCCCGTCTCTGGAGACAGATTAAG +
Preference number: 6 (lower is better)
Translates to: PAWQRSGLQWSS*GYPARLWRQIK
Trigger: CTTAATCTGTCTCCAGAGACGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS GCA 72 bp CGCCGGAACCCAGTTCCTTTGGTCACTACCTCCATCTaGTTCTGTGAAGCCATGGGAGGACTCCAGCGCCTG +
Preference number: 6 (lower is better)
Translates to: RRNPVPLVTTSI*FCEAMGGLQRL
Trigger: CAGGCGCTGGAGTCCTCCCATGGCTTCACAGAAGCAGATGGAGGTAGTGACCAAAGGAACTGGGTTCCGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249079.6
CDS GCA 72 bp CGCCGGAACCCAGTTCCTTTGGTCACTACCTCCATCTaGTTCTGTGAAGCCATGGGAGGACTCGGTGCCACG +
Preference number: 6 (lower is better)
Translates to: RRNPVPLVTTSI*FCEAMGGLGAT
Trigger: CGTGGCACCGAGTCCTCCCATGGCTTCACAGAAGCAGATGGAGGTAGTGACCAAAGGAACTGGGTTCCGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418863.5
CDS CCA 72 bp CTGCCTGGCAGAGGAGTGGACTCCAGTGGTCGAGCTTaGGCTACCCTGCCCGTCTCTGGAGACAGATTAAGT +
Preference number: 6 (lower is better)
Translates to: LPGRGVDSSGRA*ATLPVSGDRLS
Trigger: ACTTAATCTGTCTCCAGAGACGGGCAGGGTAGCCCAAGCTCGACCACTGGAGTCCACTCCTCTGCCAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249079.6
ENST00000403305.6
ENST00000619227.4
CDS GCA 72 bp CGCCGGAACCCAGTTCCTTTGGTCACTACCTCCATCTaGTTCTGTGAAGCCATGGGAGGACTCAGTCAGCGC +
Preference number: 6 (lower is better)
Translates to: RRNPVPLVTTSI*FCEAMGGLSQR
Trigger: GCGCTGACTGAGTCCTCCCATGGCTTCACAGAAGCAGATGGAGGTAGTGACCAAAGGAACTGGGTTCCGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403026.5
ENST00000619227.4
CDS CAA 72 bp GTGATGGTCTTGGGGCGGCGCCGGAACCCAGTTCCTTaGGTCACTACCTCCATCTGCTTCTGTGAAGCCATG +
Preference number: 6 (lower is better)
Translates to: VMVLGRRRNPVP*VTTSICFCEAM
Trigger: CATGGCTTCACAGAAGCAGATGGAGGTAGTGACCAAAGGAACTGGGTTCCGGCGCCGCCCCAAGACCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249079.6
ENST00000403026.5
ENST00000403305.6
ENST00000418863.5
ENST00000422191.1
ENST00000619227.4
CDS TCA 72 bp GTTTCTCCTTCTCCAAATCCCTGGTGGCTTGAGGCTTaGACTGCTCCCGGCTGTAGGCCCCATTGGCTTGAC +
Preference number: 6 (lower is better)
Translates to: VSPSPNPWWLEA*TAPGCRPHWLD
Trigger: GTCAAGCCAATGGGGCCTACAGCCGGGAGCAGTTCAAGCCTCAAGCCACCAGGGATTTGGAGAAGGAGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249079.6
ENST00000403026.5
ENST00000403305.6
ENST00000418863.5
ENST00000619227.4
CDS GCA 72 bp CGCCGGAACCCAGTTCCTTTGGTCACTACCTCCATCTaGTTCTGTGAAGCCATGGGAGGACTCCTAAGACCC +
Preference number: 6 (lower is better)
Translates to: RRNPVPLVTTSI*FCEAMGGLLRP
Trigger: GGGTCTTAGGAGTCCTCCCATGGCTTCACAGAAGCAGATGGAGGTAGTGACCAAAGGAACTGGGTTCCGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403305.6
CDS CCA 72 bp GGATGGGAGGCAGGTAGATGGGCGAGGCTATTTGCTTaGAAGGTAAGACTCTCTGGCTGGATGTTGGGCTGC +
Preference number: 6 (lower is better)
Translates to: GWEAGRWARLFA*KVRLSGWMLGC
Trigger: GCAGCCCAACATCCAGCCAGAGAGTCTTACCTTCCAAGCAAATAGCCTCGCCCATCTACCTGCCTCCCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000249079.6
ENST00000403026.5
ENST00000403305.6
ENST00000418863.5
ENST00000422191.1
ENST00000619227.4
CDS TCA 72 bp CCCCAGAAGTCTGGAAGCGGGGATCGAGCCAGAGAATaGTGCCGCCAGTTAATATTGCGACAGTGCCCAAAC +
Preference number: 6 (lower is better)
Translates to: PQKSGSGDRARE*CRQLILRQCPN
Trigger: GTTTGGGCACTGTCGCAATATTAACTGGCGGCATCATTCTCTGGCTCGATCCCCGCTTCCAGACTTCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422191.1
CDS CCA 72 bp ATGGGCGAGGCTATTTGCTTGGAAGGTAAGACTCTCTaGCTGGATGTTGGGCTGCACTGTAGGGGCAAAGCA +
Preference number: 6 (lower is better)
Translates to: MGEAICLEGKTL*LDVGLHCRGKA
Trigger: TGCTTTGCCCCTACAGTGCAGCCCAACATCCAGCCAGAGAGTCTTACCTTCCAAGCAAATAGCCTCGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000249079.6
ENST00000403026.5
ENST00000403305.6
ENST00000418863.5
ENST00000422191.1
ENST00000619227.4
CDS CAA 72 bp TGGGAGATTTCAGCAAGGATGATTCCTCGGTACTGTTaGCCCTGTCCCAGGGCCTCCATGTCAGCCAGGAAT +
Preference number: 6 (lower is better)
Translates to: WEISARMIPRYC*PCPRASMSARN
Trigger: ATTCCTGGCTGACATGGAGGCCCTGGGACAGGGCAAACAGTACCGAGGAATCATCCTTGCTGAAATCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249079.6
ENST00000403026.5
ENST00000403305.6
ENST00000619227.4
CDS CAA 90 bp CGGAGTTTCTGGGAGATTTCAGCAAGGATGATTCCTCGGTACTGTTaGCCCTGTCCCAGGGCCTCCATGTCAGCCAGGAATTCTTTCCTC +
Preference number: 6 (lower is better)
Translates to: RSFWEISARMIPRYC*PCPRASMSARNSFL
Trigger: GAGGAAAGAATTCCTGGCTGACATGGAGGCCCTGGGACAGGGCAAACAGTACCGAGGAATCATCCTTGCTGAAATCTCCCAGAAACTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249079.6
ENST00000403026.5
ENST00000403305.6
ENST00000619227.4
CDS CCA 72 bp GTGGCAAGACCCTTCCTAAGTTCCTCACTCCTTCTGTaGTCAATGTCTTCCATTTCCCGGAGTTTCTGGGAG +
Preference number: 6 (lower is better)
Translates to: VARPFLSSSLLL*SMSSISRSFWE
Trigger: CTCCCAGAAACTCCGGGAAATGGAAGACATTGACCACAGAAGGAGTGAGGAACTTAGGAAGGGTCTTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000249079.6
ENST00000403026.5
ENST00000403305.6
ENST00000619227.4
CDS CAA 72 bp ATGTCCATGATGTGGCGCTGCTGGATGTTCGTCAGTTaGGATTCCTTCATCATCACTCTGAGCAGCTCGCAG +
Preference number: 6 (lower is better)
Translates to: MSMMWRCWMFVS*DSFIITLSSSQ
Trigger: CTGCGAGCTGCTCAGAGTGATGATGAAGGAATCCAAACTGACGAACATCCAGCAGCGCCACATCATGGACAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000249079.6
ENST00000403026.5
ENST00000403305.6
ENST00000418863.5
ENST00000422191.1
CDS CAA 90 bp CCGTTCCTCCATGTCCTTCCCTGTGGCAAAGATATTTTGGAGTCTTaGTTTCTCCTTCTCCAAATCCCTGGTGGCTTGAGGCTTGAACTG +
Preference number: 6 (lower is better)
Translates to: PFLHVLPCGKDILES*FLLLQIPGGLRLEL
Trigger: CAGTTCAAGCCTCAAGCCACCAGGGATTTGGAGAAGGAGAAACAAAGACTCCAAAATATCTTTGCCACAGGGAAGGACATGGAGGAACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249079.6
ENST00000403026.5
ENST00000403305.6
ENST00000418863.5
ENST00000619227.4
CDS CAA 90 bp CTTTCTTTTCCGTTCCTCCATGTCCTTCCCTGTGGCAAAGATATTTaGGAGTCTTTGTTTCTCCTTCTCCAAATCCCTGGTGGCTTGAGG +
Preference number: 6 (lower is better)
Translates to: LSFPFLHVLPCGKDI*ESLFLLLQIPGGLR
Trigger: CCTCAAGCCACCAGGGATTTGGAGAAGGAGAAACAAAGACTCCAAAATATCTTTGCCACAGGGAAGGACATGGAGGAACGGAAAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249079.6
ENST00000403026.5
ENST00000403305.6
ENST00000418863.5
ENST00000619227.4
CDS GCA 72 bp GCATCTCCTCTTTTCATGATGTCCATGATGTGGCGCTaGTGGATGTTCGTCAGTTTGGATTCCTTCATCATC +
Preference number: 6 (lower is better)
Translates to: ASPLFMMSMMWR*WMFVSLDSFII
Trigger: GATGATGAAGGAATCCAAACTGACGAACATCCAGCAGCGCCACATCATGGACATCATGAAAAGAGGAGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249079.6
ENST00000403026.5
ENST00000403305.6
ENST00000418863.5
ENST00000422191.1
CDS CAA 72 bp CATGTCCTTCCCTGTGGCAAAGATATTTTGGAGTCTTaGTTTCTCCTTCTCCAAATCCCTGGTGGCTTGAGG +
Preference number: 6 (lower is better)
Translates to: HVLPCGKDILES*FLLLQIPGGLR
Trigger: CCTCAAGCCACCAGGGATTTGGAGAAGGAGAAACAAAGACTCCAAAATATCTTTGCCACAGGGAAGGACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000249079.6
ENST00000403026.5
ENST00000403305.6
ENST00000418863.5
ENST00000619227.4