RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C21ORF91 (Homo sapiens)

Ensembl gene IDs: ENSG00000154642

Ensembl transcript IDs: ENST00000284881.9, ENST00000400558.7, ENST00000400559.7, ENST00000405964.2, ENST00000493464.1

Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CATGGTAACTTAGAACAGTTCTTCAGAAGCTGTTCGATGGCAACGTaGCGGACATGGAGCTGTGAGGCCAAAGAATCTTTTTCTTGCACT +
Preference number: 1 (lower is better)
Translates to: HGNLEQFFRSCSMAT*RTWSCEAKESFSCT
Trigger: AGTGCAAGAAAAAGATTCTTTGGCCTCACAGCTCCATGTCCGCCACGTTGCCATCGAACAGCTTCTGAAGAACTGTTCTAAGTTACCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400558.7
3UTR GCA 90 bp TGCTCCACCATTGTGCATAGTCAACGACACAACAAAACACTATTCTaGTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCATGCCTTT +
Preference number: 1 (lower is better)
Translates to: CSTIVHSQRHNKTLF*CLNHLLLESQVHAF
Trigger: AAAGGCATGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTGTTGTGTCGTTGACTATGCACAATGGTGGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
3UTR-3UTR CCA 90 bp CAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCATGCCAAAGTTTGCATGTCTaGGAGACCAATAAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: QNTILLPESSITGVSSACQSLHV*ETNKGQ
Trigger: CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTG...GCATGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
3UTR-3UTR GCA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGCCTGTTCGCCCTACTTaGAGACATGGTAACTTAGAA +
Preference number: 2 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQPVRPT*RHGNLE
Trigger: TTCTAAGTTACCATGTCTGCAAGTAGGGCGAACAGG...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400558.7
3UTR-3UTR GCA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGTTGTTTATGGGTAGGTaGGACTTCATTCCTGTTCGC +
Preference number: 2 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQLFMGR*DFIPVR
Trigger: GCGAACAGGAATGAAGTCGCACCTACCCATAAACAA...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400558.7
3UTR-3UTR CCA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGCAAAGTTTGCATGTCTaGGAGACCAATAAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQQSLHV*ETNKGQ
Trigger: CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTG...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
3UTR-3UTR TCA 90 bp CAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCATGCTCTATGGAGACAAATTaGCATAGAAGCCAGATTAGT +
Preference number: 2 (lower is better)
Translates to: QNTILLPESSITGVSSACSMETN*HRSQIS
Trigger: ACTAATCTGGCTTCTATGTCAATTTGTCTCCATAGA...GCATGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
3UTR-3UTR TCA 90 bp GATGCGTCTGAAAGAAACAAGGTACACACACTTACTAAAATTCCCCTTTGCTTTTTATATCTTTATGCATaGAGCTGCCACGTTACTGGG +
Preference number: 2 (lower is better)
Translates to: DASERNKVHTLTKIPLCFLYLYA*SCHVTG
Trigger: CCCAGTAACGTGGCAGCTTCATGCATAAAGATATAA...AAAGCAAAGGGGAATTTTAGTAAGTGTGTGTACCTTGTTTCTTTCAGACGCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284881.9
3UTR-3UTR TCA 90 bp GATGCGTCTGAAAGAAACAAGGTACACACACTTACTAAAATTCCCCTTTGCTTTCCAAATAAAGTAGTGTaGGTACCAGCACCACAAAGT +
Preference number: 2 (lower is better)
Translates to: DASERNKVHTLTKIPLCFPNKVV*VPAPQS
Trigger: ACTTTGTGGTGCTGGTACTCACACTACTTTATTTGG...AAAGCAAAGGGGAATTTTAGTAAGTGTGTGTACCTTGTTTCTTTCAGACGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284881.9
3UTR-3UTR GCA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGAACTTCTTCAAAGTTTaGATGTCTGGGAGACCAATA +
Preference number: 2 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRNFFKV*MSGRPI
Trigger: TATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTT...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
3UTR-3UTR GCA 90 bp GATGCGTCTGAAAGAAACAAGGTACACACACTTACTAAAATTCCCCTTTGCTTTTTTGCTCCACCATTGTaGATAGTCAACGACACAACA +
Preference number: 2 (lower is better)
Translates to: DASERNKVHTLTKIPLCFFAPPL*IVNDTT
Trigger: TGTTGTGTCGTTGACTATGCACAATGGTGGAGCAAA...AAAGCAAAGGGGAATTTTAGTAAGTGTGTGTACCTTGTTTCTTTCAGACGCATC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000284881.9
3UTR-3UTR CCA 90 bp CAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCATGCATGCATCACAGTCACTaGTGTGAAGCTAATAATGAA +
Preference number: 2 (lower is better)
Translates to: QNTILLPESSITGVSSACMHHSH*CEANNE
Trigger: TTCATTATTAGCTTCACACCAGTGACTGTGATGCAT...GCATGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
3UTR-3UTR CCA 90 bp GAAATGAAAATACTGAGATGCAAGCATTATAGCCCTCCTCCAAGTTACCTTTATAAGCTGCCACGTTACTaGGCTTTTCAGCAGATACTT +
Preference number: 2 (lower is better)
Translates to: EMKILRCKHYSPPPSYLYKLPRY*AFQQIL
Trigger: AAGTATCTGCTGAAAAGCCCAGTAACGTGGCAGCTT...ATAAAGGTAACTTGGAGGAGGGCTATAATGCTTGCATCTCAGTATTTTCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284881.9
3UTR-3UTR TCA 90 bp GAAATGAAAATACTGAGATGCAAGCATTATAGCCCTCCTCCAAGTTACCTTTATATTGGAAGTGAGGCTTaGCTTACTCTGTCCAAATTC +
Preference number: 2 (lower is better)
Translates to: EMKILRCKHYSPPPSYLYIGSEA*LTLSKF
Trigger: GAATTTGGACAGAGTAAGTCAAGCCTCACTTCCAAT...ATAAAGGTAACTTGGAGGAGGGCTATAATGCTTGCATCTCAGTATTTTCATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
3UTR-3UTR TCA 90 bp GATGCGTCTGAAAGAAACAAGGTACACACACTTACTAAAATTCCCCTTTGCTTTTATCCCCAACTTTTATaGCTGTCCCTAACTCATCTA +
Preference number: 2 (lower is better)
Translates to: DASERNKVHTLTKIPLCFYPQLL*LSLTHL
Trigger: TAGATGAGTTAGGGACAGTCATAAAAGTTGGGGATA...AAAGCAAAGGGGAATTTTAGTAAGTGTGTGTACCTTGTTTCTTTCAGACGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000284881.9
3UTR-3UTR GCA 90 bp CAACAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCAAACTTCTTCAAAGTTTaGATGTCTGGGAGACCAATA +
Preference number: 2 (lower is better)
Translates to: QQNTILLPESSITGVSSANFFKV*MSGRPI
Trigger: TATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTT...TGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
3UTR-3UTR GCA 90 bp CAACAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCATGTTGTATTCAGGACTaGAACTTATGGCTCATATTC +
Preference number: 2 (lower is better)
Translates to: QQNTILLPESSITGVSSACCIQD*NLWLIF
Trigger: GAATATGAGCCATAAGTTGCAGTCCTGAATACAACA...TGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
3UTR-3UTR TCA 90 bp GATGCGTCTGAAAGAAACAAGGTACACACACTTACTAAAATTCCCCTTTGCTTTGACCTGAAATATGGGTaGACATATTCACACATGATA +
Preference number: 2 (lower is better)
Translates to: DASERNKVHTLTKIPLCFDLKYG*TYSHMI
Trigger: TATCATGTGTGAATATGTTCACCCATATTTCAGGTC...AAAGCAAAGGGGAATTTTAGTAAGTGTGTGTACCTTGTTTCTTTCAGACGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284881.9
3UTR-3UTR TCA 90 bp GAAATGAAAATACTGAGATGCAAGCATTATAGCCCTCCTCCAAGTTACCTTTATAAATTTAGTAATGGATaGCTGGCAGTCTGTTTTGCC +
Preference number: 2 (lower is better)
Translates to: EMKILRCKHYSPPPSYLYKFSNG*LAVCFA
Trigger: GGCAAAACAGACTGCCAGTCATCCATTACTAAATTT...ATAAAGGTAACTTGGAGGAGGGCTATAATGCTTGCATCTCAGTATTTTCATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284881.9
3UTR-3UTR GCA 90 bp GAAATGAAAATACTGAGATGCAAGCATTATAGCCCTCCTCCAAGTTACCTTTATACTGGCAGTCTGTTTTaGCACTTTTTAAACAGTAGT +
Preference number: 2 (lower is better)
Translates to: EMKILRCKHYSPPPSYLYTGSLF*HFLNSS
Trigger: ACTACTGTTTAAAAAGTGGCAAAACAGACTGCCAGT...ATAAAGGTAACTTGGAGGAGGGCTATAATGCTTGCATCTCAGTATTTTCATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284881.9
3UTR CAA 90 bp AGCTATGTATATTTGTCAGAAAACTCCTTTCTTTGGATAACACTGTaGTATTCAGGACTGCAACTTATGGCTCATATTCTGGAAATATGC +
Preference number: 2 (lower is better)
Translates to: SYVYLSENSFLWITL*YSGLQLMAHILEIC
Trigger: GCATATTTCCAGAATATGAGCCATAAGTTGCAGTCCTGAATACAACAGTGTTATCCAAAGAAAGGAGTTTTCTGACAAATATACATAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
3UTR TCA 72 bp AAGCTGTTCGATGGCAACGTGGCGGACATGGAGCTGTaGGGCCAAAGAATCTTTTTCTTGCACTTGGTGAGT +
Preference number: 3 (lower is better)
Translates to: KLFDGNVADMEL*GQRIFFLHLVS
Trigger: ACTCACCAAGTGCAAGAAAAAGATTCTTTGGCCTCACAGCTCCATGTCCGCCACGTTGCCATCGAACAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400558.7
3UTR CCA 72 bp TTCTTCAGAAGCTGTTCGATGGCAACGTGGCGGACATaGAGCTGTGAGGCCAAAGAATCTTTTTCTTGCACT +
Preference number: 3 (lower is better)
Translates to: FFRSCSMATWRT*SCEAKESFSCT
Trigger: AGTGCAAGAAAAAGATTCTTTGGCCTCACAGCTCCATGTCCGCCACGTTGCCATCGAACAGCTTCTGAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400558.7
3UTR CCA 72 bp TTAGAACAGTTCTTCAGAAGCTGTTCGATGGCAACGTaGCGGACATGGAGCTGTGAGGCCAAAGAATCTTTT +
Preference number: 3 (lower is better)
Translates to: LEQFFRSCSMAT*RTWSCEAKESF
Trigger: AAAAGATTCTTTGGCCTCACAGCTCCATGTCCGCCACGTTGCCATCGAACAGCTTCTGAAGAACTGTTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400558.7
3UTR TCA 72 bp ATAGTCAACGACACAACAAAACACTATTCTGCTGCCTaGATCATCTATTACTGGAGTCTCAAGTGCATGCCT +
Preference number: 3 (lower is better)
Translates to: IVNDTTKHYSAA*IIYYWSLKCMP
Trigger: AGGCATGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTGTTGTGTCGTTGACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
3UTR CCA 72 bp ACAACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTaGGAGACCAATAAAGGGCAGGGCATACGAAGTAAG +
Preference number: 3 (lower is better)
Translates to: TTFFKLLQSLHV*ETNKGQGIRSK
Trigger: CTTACTTCGTATGCCCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
3UTR-3UTR CAA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGAAACTTCTTCAAAGTTaGCATGTCTGGGAGACCAAT +
Preference number: 3 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRKLLQS*HVWETN
Trigger: ATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTT...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
3UTR-3UTR CAA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGAAACTTCTTCAAAGTTaGCATGTCTGGGAGACCAAT +
Preference number: 3 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQKLLQS*HVWETN
Trigger: ATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTT...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
3UTR-3UTR CAA 90 bp CAACAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCACTTTGGATAACACTGTaGTATTCAGGACTGCAACTT +
Preference number: 3 (lower is better)
Translates to: QQNTILLPESSITGVSSALWITL*YSGLQL
Trigger: AAGTTGCAGTCCTGAATACAACAGTGTTATCCAAAG...TGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
3UTR-3UTR CAA 90 bp CAACAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCAGAACGTGAAAAAGATTaGTCTTATCTCACTCCCCTT +
Preference number: 3 (lower is better)
Translates to: QQNTILLPESSITGVSSAEREKD*SYLTPL
Trigger: AAGGGGAGTGAGATAAGACAAATCTTTTTCACGTTC...TGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284881.9
3UTR TCA 72 bp AAGCAAGAGGAGGCTTTCATTTCTATGGAGACAAATTaGCATAGAAGCCAGATTAGTCTTTTCTTCCTGAAC +
Preference number: 3 (lower is better)
Translates to: KQEEAFISMETN*HRSQISLFFLN
Trigger: GTTCAGGAAGAAAAGACTAATCTGGCTTCTATGTCAATTTGTCTCCATAGAAATGAAAGCCTCCTCTTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
3UTR TCA 72 bp TTAATACTTTCTAAATTGCCTCTTTTGGAGGTACGGTaGAAGAAAAACATTCTAGATGCGTCTGAAAGAAAC +
Preference number: 3 (lower is better)
Translates to: LILSKLPLLEVR*KKNILDASERN
Trigger: GTTTCTTTCAGACGCATCTAGAATGTTTTTCTTTCACCGTACCTCCAAAAGAGGCAATTTAGAAAGTATTAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284881.9
3UTR GCA 72 bp CTCATATTCTGGAAATATGCTACTATTGATATCAAATaGAACATATCCCCAACTTTTATGACTGTCCCTAAC +
Preference number: 3 (lower is better)
Translates to: LIFWKYATIDIK*NISPTFMTVPN
Trigger: GTTAGGGACAGTCATAAAAGTTGGGGATATGTTGCATTTGATATCAATAGTAGCATATTTCCAGAATATGAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284881.9
3UTR CCA 72 bp CAAAGCTATGTATATTTGTCAGAAAACTCCTTTCTTTaGATAACACTGTTGTATTCAGGACTGCAACTTATG +
Preference number: 3 (lower is better)
Translates to: QSYVYLSENSFL*ITLLYSGLQLM
Trigger: CATAAGTTGCAGTCCTGAATACAACAGTGTTATCCAAAGAAAGGAGTTTTCTGACAAATATACATAGCTTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR GCA 90 bp AGTTCTTCAGAAGCTGTTCGATGGCAACGTGGCGGACATGGAGCTGTGAGGCCAACCACCGCCGTTCCGTaGGGCTCGGGTTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: SSSEAVRWQRGGHGAVRPTTAVP*GSGSST
Trigger: AGTGGAGGAACCCGAGCCGCACGGAACGGCGGTGGT...TGGCCTCACAGCTCCATGTCCGCCACGTTGCCATCGAACAGCTTCTGAAGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400558.7
CDS-3UTR CCA 90 bp TCTTCAGAAGCTGTTCGATGGCAACGTGGCGGACATGGAGCTGTGAGGCCAAAGTGTTCGATGGCAACGTaGCGGACATGGAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: SSEAVRWQRGGHGAVRPKCSMAT*RTWSCE
Trigger: CTCACAGCTCCATGTCCGCCACGTTGCCATCGAACA...CTTTGGCCTCACAGCTCCATGTCCGCCACGTTGCCATCGAACAGCTTCTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400558.7
CDS-3UTR CCA 90 bp AGTTCTTCAGAAGCTGTTCGATGGCAACGTGGCGGACATGGAGCTGTGAGGCCATCAGAAGCTGTTCGATaGCAACGTGGCGGACATGGA +
Preference number: 4 (lower is better)
Translates to: SSSEAVRWQRGGHGAVRPSEAVR*QRGGHG
Trigger: TCCATGTCCGCCACGTTGCCATCGAACAGCTTCTGA...TGGCCTCACAGCTCCATGTCCGCCACGTTGCCATCGAACAGCTTCTGAAGAACT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400558.7
CDS-3UTR GCA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGACCACCGCCGTTCCGTaGGGCTCGGGTTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRTTAVP*GSGSST
Trigger: AGTGGAGGAACCCGAGCCGCACGGAACGGCGGTGGT...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR GCA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGACCACCGCCGTTCCGTaGGGCTCGGGTTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQTTAVP*GSGSST
Trigger: AGTGGAGGAACCCGAGCCGCACGGAACGGCGGTGGT...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CCA 90 bp AGTTCTTCAGAAGCTGTTCGATGGCAACGTGGCGGACATGGAGCTGTGAGGCCACAAAGTTTGCATGTCTaGGAGACCAATAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SSSEAVRWQRGGHGAVRPQSLHV*ETNKGQ
Trigger: CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTG...TGGCCTCACAGCTCCATGTCCGCCACGTTGCCATCGAACAGCTTCTGAAGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400558.7
CDS-3UTR GCA 90 bp TCTTCAGAAGCTGTTCGATGGCAACGTGGCGGACATGGAGCTGTGAGGCCAAAGAAACTTATTCCTCTCTaGTGTAATGTGGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: SSEAVRWQRGGHGAVRPKKLIPL*CNVDAG
Trigger: CCCAGCATCCACATTACAGCAGAGAGGAATAAGTTT...CTTTGGCCTCACAGCTCCATGTCCGCCACGTTGCCATCGAACAGCTTCTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400558.7
CDS-3UTR CCA 90 bp GAAGCTGTTCGATGGCAACGTGGCGGACATGGAGCTGTGAGGCCAAAGAATCTTGGCCCCTTAATGATTTaGTGTGCAAGAGATCAGACT +
Preference number: 4 (lower is better)
Translates to: EAVRWQRGGHGAVRPKNLGPLMI*CARDQT
Trigger: AGTCTGATCTCTTGCACACCAAATCATTAAGGGGCC...AAGATTCTTTGGCCTCACAGCTCCATGTCCGCCACGTTGCCATCGAACAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400558.7
CDS-3UTR GCA 90 bp TCTTCAGAAGCTGTTCGATGGCAACGTGGCGGACATGGAGCTGTGAGGCCAAAGTCAATGTTTACAAACTaGTCCTCTTCGTTCATAGTG +
Preference number: 4 (lower is better)
Translates to: SSEAVRWQRGGHGAVRPKSMFTN*SSSFIV
Trigger: CACTATGAACGAAGAGGAGCAGTTTGTAAACATTGA...CTTTGGCCTCACAGCTCCATGTCCGCCACGTTGCCATCGAACAGCTTCTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400558.7
CDS-3UTR GCA 90 bp TTAGAACAGTTCTTCAGAAGCTGTTCGATGGCAACGTGGCGGACATGGAGCTGTCCTGTTCGCCCTACTTaGAGACATGGTAACTTAGAA +
Preference number: 4 (lower is better)
Translates to: LEQFFRSCSMATWRTWSCPVRPT*RHGNLE
Trigger: TTCTAAGTTACCATGTCTGCAAGTAGGGCGAACAGG...ACAGCTCCATGTCCGCCACGTTGCCATCGAACAGCTTCTGAAGAACTGTTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400558.7
CDS-3UTR GCA 90 bp TTAGAACAGTTCTTCAGAAGCTGTTCGATGGCAACGTGGCGGACATGGAGCTGTTTGTTTATGGGTAGGTaGGACTTCATTCCTGTTCGC +
Preference number: 4 (lower is better)
Translates to: LEQFFRSCSMATWRTWSCLFMGR*DFIPVR
Trigger: GCGAACAGGAATGAAGTCGCACCTACCCATAAACAA...ACAGCTCCATGTCCGCCACGTTGCCATCGAACAGCTTCTGAAGAACTGTTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400558.7
CDS-3UTR CCA 90 bp TCTTCAGAAGCTGTTCGATGGCAACGTGGCGGACATGGAGCTGTGAGGCCAAAGTGTTACGACATAAAGTaGCACCTGAATCTTGTAACA +
Preference number: 4 (lower is better)
Translates to: SSEAVRWQRGGHGAVRPKCYDIK*HLNLVT
Trigger: TGTTACAAGATTCAGGTGCCACTTTATGTCGTAACA...CTTTGGCCTCACAGCTCCATGTCCGCCACGTTGCCATCGAACAGCTTCTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400558.7
CDS-3UTR CCA 90 bp TTAGAACAGTTCTTCAGAAGCTGTTCGATGGCAACGTGGCGGACATGGAGCTGTCTGGACATTAGCCTCTaGACTAGAGATTGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LEQFFRSCSMATWRTWSCLDISL*TRDCLF
Trigger: GAAGAGACAATCTCTAGTCCAGAGGCTAATGTCCAG...ACAGCTCCATGTCCGCCACGTTGCCATCGAACAGCTTCTGAAGAACTGTTCTAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400558.7
CDS-3UTR CCA 90 bp CAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCATGCGCAACGTGGCGGACATaGAGCTGTGAGGCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: QNTILLPESSITGVSSACATWRT*SCEAKE
Trigger: TTCTTTGGCCTCACAGCTCCATGTCCGCCACGTTGC...GCATGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CCA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGTGTTCGATGGCAACGTaGCGGACATGGAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRCSMAT*RTWSCE
Trigger: CTCACAGCTCCATGTCCGCCACGTTGCCATCGAACA...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR TCA 90 bp GAAGCTGTTCGATGGCAACGTGGCGGACATGGAGCTGTGAGGCCAAAGAATCTTCTGAAATTAAACAGATaGTGCTGGGGGTTTTTAGAA +
Preference number: 4 (lower is better)
Translates to: EAVRWQRGGHGAVRPKNLLKLNR*CWGFLE
Trigger: TTCTAAAAACCCCCAGCATCATCTGTTTAATTTCAG...AAGATTCTTTGGCCTCACAGCTCCATGTCCGCCACGTTGCCATCGAACAGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400558.7
CDS-3UTR CCA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGCAACGTGGCGGACATaGAGCTGTGAGGCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQATWRT*SCEAKE
Trigger: TTCTTTGGCCTCACAGCTCCATGTCCGCCACGTTGC...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CCA 90 bp CAACAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCATGTTCGATGGCAACGTaGCGGACATGGAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: QQNTILLPESSITGVSSACSMAT*RTWSCE
Trigger: CTCACAGCTCCATGTCCGCCACGTTGCCATCGAACA...TGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CCA 90 bp CAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCATGCTCAGAAGCTGTTCGATaGCAACGTGGCGGACATGGA +
Preference number: 4 (lower is better)
Translates to: QNTILLPESSITGVSSACSEAVR*QRGGHG
Trigger: TCCATGTCCGCCACGTTGCCATCGAACAGCTTCTGA...GCATGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CCA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGTCAGAAGCTGTTCGATaGCAACGTGGCGGACATGGA +
Preference number: 4 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRSEAVR*QRGGHG
Trigger: TCCATGTCCGCCACGTTGCCATCGAACAGCTTCTGA...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CCA 90 bp CAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCATGCTGTGGATGCTGGGTCTaGACATTAGCCTCTGGACTA +
Preference number: 4 (lower is better)
Translates to: QNTILLPESSITGVSSACCGCWV*TLASGL
Trigger: TAGTCCAGAGGCTAATGTCCAGACCCAGCATCCACA...GCATGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CCA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGTGTGGATGCTGGGTCTaGACATTAGCCTCTGGACTA +
Preference number: 4 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRCGCWV*TLASGL
Trigger: TAGTCCAGAGGCTAATGTCCAGACCCAGCATCCACA...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR TCA 90 bp CAACAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCAGCGGACATGGAGCTGTaGGGCCAAAGAATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: QQNTILLPESSITGVSSAADMEL*GQRIFF
Trigger: GAAAAAGATTCTTTGGCCTCACAGCTCCATGTCCGC...TGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR TCA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGCGGACATGGAGCTGTaGGGCCAAAGAATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQADMEL*GQRIFF
Trigger: GAAAAAGATTCTTTGGCCTCACAGCTCCATGTCCGC...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CCA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGTGTGGATGCTGGGTCTaGACATTAGCCTCTGGACTA +
Preference number: 4 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQCGCWV*TLASGL
Trigger: TAGTCCAGAGGCTAATGTCCAGACCCAGCATCCACA...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CCA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGCTCTCTGCTGTAATGTaGATGCTGGGTCTGGACATT +
Preference number: 4 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRLSAVM*MLGLDI
Trigger: AATGTCCAGACCCAGCATCCACATTACAGCAGAGAG...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR GCA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGAGCTTTGCATTCAGTTaGTCTACCTCACCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRSFAFS*STSPRV
Trigger: GACTCTTGGTGAGGTAGAGCAACTGAATGCAAAGCT...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284881.9
ENST00000400559.7
CDS-3UTR GCA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGTTGTTTATGGGTAGGTaGGACTTCATTCCTGTTCGC +
Preference number: 4 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRLFMGR*DFIPVR
Trigger: GCGAACAGGAATGAAGTCGCACCTACCCATAAACAA...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CCA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGGGCCCCTTAATGATTTaGTGTGCAAGAGATCAGACT +
Preference number: 4 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRGPLMI*CARDQT
Trigger: AGTCTGATCTCTTGCACACCAAATCATTAAGGGGCC...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CCA 90 bp GGGAGACCAATAAAGGGCAGGGCATACGAAGTAAGTCTGTTTAGGTCAGTTGTTGATCGAGGACAACCCTaGTTTGCAATTAAATGGTAT +
Preference number: 4 (lower is better)
Translates to: GRPIKGRAYEVSLFRSVVDRGQP*FAIKWY
Trigger: ATACCATTTAATTGCAAACCAGGGTTGTCCTCGATC...AACAACTGACCTAAACAGACTTACTTCGTATGCCCTGCCCTTTATTGGTCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400558.7
CDS-3UTR CCA 90 bp TTAGAACAGTTCTTCAGAAGCTGTTCGATGGCAACGTGGCGGACATGGAGCTGTTTTTGCAGAATATTTTaGTACTTGGGAGTCAAACTG +
Preference number: 4 (lower is better)
Translates to: LEQFFRSCSMATWRTWSCFCRIF*YLGVKL
Trigger: CAGTTTGACTCCCAAGTACCAAAATATTCTGCAAAA...ACAGCTCCATGTCCGCCACGTTGCCATCGAACAGCTTCTGAAGAACTGTTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400558.7
CDS-3UTR CCA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGCTGGACATTAGCCTCTaGACTAGAGATTGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRLDISL*TRDCLF
Trigger: GAAGAGACAATCTCTAGTCCAGAGGCTAATGTCCAG...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR TCA 90 bp GAAATGAAAATACTGAGATGCAAGCATTATAGCCCTCCTCCAAGTTACCTTTATCTCTTCCCTGCCCCATaGCCACAAAACTTTACTTGG +
Preference number: 4 (lower is better)
Translates to: EMKILRCKHYSPPPSYLYLFPAP*PQNFTW
Trigger: CCAAGTAAAGTTTTGTGGTCATGGGGCAGGGAAGAG...ATAAAGGTAACTTGGAGGAGGGCTATAATGCTTGCATCTCAGTATTTTCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR GCA 90 bp CAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCATGCAATTCAATTCCTCTCTaGTGTAATGTGGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: QNTILLPESSITGVSSACNSIPL*CNVDAG
Trigger: CCCAGCATCCACATTACAGCAGAGAGGAATTGAATT...GCATGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR GCA 90 bp CAACAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCACCTGTTCGCCCTACTTaGAGACATGGTAACTTAGAA +
Preference number: 4 (lower is better)
Translates to: QQNTILLPESSITGVSSAPVRPT*RHGNLE
Trigger: TTCTAAGTTACCATGTCTGCAAGTAGGGCGAACAGG...TGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR GCA 90 bp CAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCATGCTTTGCTCCACCATTGTaGATAGTCAACGACACAACA +
Preference number: 4 (lower is better)
Translates to: QNTILLPESSITGVSSACFAPPL*IVNDTT
Trigger: TGTTGTGTCGTTGACTATGCACAATGGTGGAGCAAA...GCATGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CCA 90 bp GATGCGTCTGAAAGAAACAAGGTACACACACTTACTAAAATTCCCCTTTGCTTTCTCTCTGCTGTAATGTaGATGCTGGGTCTGGACATT +
Preference number: 4 (lower is better)
Translates to: DASERNKVHTLTKIPLCFLSAVM*MLGLDI
Trigger: AATGTCCAGACCCAGCATCCACATTACAGCAGAGAG...AAAGCAAAGGGGAATTTTAGTAAGTGTGTGTACCTTGTTTCTTTCAGACGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CCA 90 bp CAACAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCACAAAGTTTGCATGTCTaGGAGACCAATAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: QQNTILLPESSITGVSSAQSLHV*ETNKGQ
Trigger: CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTG...TGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CCA 90 bp CAACAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCAAAGCTGCCACGTTACTaGGCTTTTCAGCAGATACTT +
Preference number: 4 (lower is better)
Translates to: QQNTILLPESSITGVSSAKLPRY*AFQQIL
Trigger: AAGTATCTGCTGAAAAGCCCAGTAACGTGGCAGCTT...TGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR TCA 90 bp CAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCATGCGAGAATAAAATGCAGTaGCCTGAAATATGGGTGAAC +
Preference number: 4 (lower is better)
Translates to: QNTILLPESSITGVSSACENKMQ*PEIWVN
Trigger: GTTCACCCATATTTCAGGTCACTGCATTTTATTCTC...GCATGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR TCA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGGAGAATAAAATGCAGTaGCCTGAAATATGGGTGAAC +
Preference number: 4 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRENKMQ*PEIWVN
Trigger: GTTCACCCATATTTCAGGTCACTGCATTTTATTCTC...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284881.9
ENST00000400559.7
CDS-3UTR TCA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGTATTTGAATTGGAAGTaGGGCTTGACTTACTCTGTC +
Preference number: 4 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRYLNWK*GLTYSV
Trigger: GACAGAGTAAGTCAAGCCTCACTTCCAATTCAAATA...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR TCA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGTTATATCTTTATGCATaGAGCTGCCACGTTACTGGG +
Preference number: 4 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQLYLYA*SCHVTG
Trigger: CCCAGTAACGTGGCAGCTTCATGCATAAAGATATAA...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR TCA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGTATCCCCAACTTTTATaGCTGTCCCTAACTCATCTA +
Preference number: 4 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRYPQLL*LSLTHL
Trigger: TAGATGAGTTAGGGACAGTCATAAAAGTTGGGGATA...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR TCA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGCCAAATAAAGTAGTGTaGGTACCAGCACCACAAAGT +
Preference number: 4 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQPNKVV*VPAPQS
Trigger: ACTTTGTGGTGCTGGTACTCACACTACTTTATTTGG...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR GCA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGTTAGAGATGCCACCTaGACTTCCATCTATCCATTT +
Preference number: 4 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQVRDAT*TSIYPF
Trigger: AAATGGATAGATGGAAGTGCAGGTGGCATCTCTAAC...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR GCA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGAATTCAATTCCTCTCTaGTGTAATGTGGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQNSIPL*CNVDAG
Trigger: CCCAGCATCCACATTACAGCAGAGAGGAATTGAATT...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284881.9
ENST00000400559.7
CDS-3UTR CCA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGAGCTCAAAACAAATGTaGCAGAAGGAGAGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRSSKQM*QKESVS
Trigger: AGAAACACTCTCCTTCTGCCACATTTGTTTTGAGCT...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CCA 90 bp GATGCGTCTGAAAGAAACAAGGTACACACACTTACTAAAATTCCCCTTTGCTTTGGCCCCTTAATGATTTaGTGTGCAAGAGATCAGACT +
Preference number: 4 (lower is better)
Translates to: DASERNKVHTLTKIPLCFGPLMI*CARDQT
Trigger: AGTCTGATCTCTTGCACACCAAATCATTAAGGGGCC...AAAGCAAAGGGGAATTTTAGTAAGTGTGTGTACCTTGTTTCTTTCAGACGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CCA 90 bp CAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCATGCGATCGAGGACAACCCTaGTTTGCAATTAAATGGTAT +
Preference number: 4 (lower is better)
Translates to: QNTILLPESSITGVSSACDRGQP*FAIKWY
Trigger: ATACCATTTAATTGCAAACCAGGGTTGTCCTCGATC...GCATGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CCA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGGAATATTTTGGTACTTaGGAGTCAAACTGTGGGAGT +
Preference number: 4 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGREYFGT*ESNCGS
Trigger: ACTCCCACAGTTTGACTCCCAAGTACCAAAATATTC...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CCA 90 bp GATGCGTCTGAAAGAAACAAGGTACACACACTTACTAAAATTCCCCTTTGCTTTCTGGACATTAGCCTCTaGACTAGAGATTGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: DASERNKVHTLTKIPLCFLDISL*TRDCLF
Trigger: GAAGAGACAATCTCTAGTCCAGAGGCTAATGTCCAG...AAAGCAAAGGGGAATTTTAGTAAGTGTGTGTACCTTGTTTCTTTCAGACGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR TCA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGCTGAAATTAAACAGATaGTGCTGGGGGTTTTTAGAA +
Preference number: 4 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRLKLNR*CWGFLE
Trigger: TTCTAAAAACCCCCAGCATCATCTGTTTAATTTCAG...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR TCA 90 bp CAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCATGCGACCTGAAATATGGGTaGACATATTCACACATGATA +
Preference number: 4 (lower is better)
Translates to: QNTILLPESSITGVSSACDLKYG*TYSHMI
Trigger: TATCATGTGTGAATATGTTCACCCATATTTCAGGTC...GCATGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR TCA 90 bp GATGCGTCTGAAAGAAACAAGGTACACACACTTACTAAAATTCCCCTTTGCTTTATTGGAAGTGAGGCTTaGCTTACTCTGTCCAAATTC +
Preference number: 4 (lower is better)
Translates to: DASERNKVHTLTKIPLCFIGSEA*LTLSKF
Trigger: GAATTTGGACAGAGTAAGTCAAGCCTCACTTCCAAT...AAAGCAAAGGGGAATTTTAGTAAGTGTGTGTACCTTGTTTCTTTCAGACGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR TCA 90 bp CAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCATGCCTTTTGGAGGTACGGTaGAAGAAAAACATTCTAGAT +
Preference number: 4 (lower is better)
Translates to: QNTILLPESSITGVSSACLLEVR*KKNILD
Trigger: ATCTAGAATGTTTTTCTTTCACCGTACCTCCAAAAG...GCATGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR GCA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGCAGATCCTTATTTTGTaGATACTGCACAATCCAGTT +
Preference number: 4 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRQILIL*ILHNPV
Trigger: AACTGGATTGTGCAGTATGCACAAAATAAGGATCTG...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR GCA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGATGAAAATACTGAGATaGAAGCATTATAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRMKILR*KHYSPP
Trigger: AGGAGGGCTATAATGCTTGCATCTCAGTATTTTCAT...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR GCA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGTCAAAAACCTGGATTTaGTGTAGGAGCTTTGCATTC +
Preference number: 4 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQSKTWI*CRSFAF
Trigger: GAATGCAAAGCTCCTACAGCAAATCCAGGTTTTTGA...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400559.7
CDS-3UTR CCA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGAGCTCAAAACAAATGTaGCAGAAGGAGAGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQSSKQM*QKESVS
Trigger: AGAAACACTCTCCTTCTGCCACATTTGTTTTGAGCT...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CCA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGATCGAGGACAACCCTaGTTTGCAATTAAATGGTAT +
Preference number: 4 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQDRGQP*FAIKWY
Trigger: ATACCATTTAATTGCAAACCAGGGTTGTCCTCGATC...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CCA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGAATATTTTGGTACTTaGGAGTCAAACTGTGGGAGT +
Preference number: 4 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQEYFGT*ESNCGS
Trigger: ACTCCCACAGTTTGACTCCCAAGTACCAAAATATTC...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CCA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGTGTTACGACATAAAGTaGCACCTGAATCTTGTAACA +
Preference number: 4 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRCYDIK*HLNLVT
Trigger: TGTTACAAGATTCAGGTGCCACTTTATGTCGTAACA...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CCA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGTTAGTAATGGATGACTaGCAGTCTGTTTTGCCACTT +
Preference number: 4 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQLVMDD*QSVLPL
Trigger: AAGTGGCAAAACAGACTGCCAGTCATCCATTACTAA...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
3UTR CAA 72 bp GCAAGCATTATAGCCCTCCTCCAAGTTACCTTTATTTaGTGTGAGGGCTCTAGTATTCTGGTAAATAAACTC +
Preference number: 4 (lower is better)
Translates to: ASIIALLQVTFI*CEGSSILVNKL
Trigger: GAGTTTATTTACCAGAATACTAGAGCCCTCACACAAAATAAAGGTAACTTGGAGGAGGGCTATAATGCTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR TCA 90 bp CAACAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCACTGAAATTAAACAGATaGTGCTGGGGGTTTTTAGAA +
Preference number: 4 (lower is better)
Translates to: QQNTILLPESSITGVSSALKLNR*CWGFLE
Trigger: TTCTAAAAACCCCCAGCATCATCTGTTTAATTTCAG...TGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR TCA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGACCTGAAATATGGGTaGACATATTCACACATGATA +
Preference number: 4 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQDLKYG*TYSHMI
Trigger: TATCATGTGTGAATATGTTCACCCATATTTCAGGTC...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284881.9
ENST00000400559.7
CDS-3UTR TCA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGTCTATGGAGACAAATTaGCATAGAAGCCAGATTAGT +
Preference number: 4 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQSMETN*HRSQIS
Trigger: ACTAATCTGGCTTCTATGTCAATTTGTCTCCATAGA...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR TCA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGCAGTTTAAGTATTCTTaGAACTTTACCCAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQQFKYS*NFTQSG
Trigger: GCCACTTTGGGTAAAGTTTCAAGAATACTTAAACTG...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR TCA 90 bp CAACAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCATCACAATGCTTTCTTTaGGCACTAAGTTCAATGATG +
Preference number: 4 (lower is better)
Translates to: QQNTILLPESSITGVSSASQCFL*ALSSMM
Trigger: CATCATTGAACTTAGTGCTCAAAGAAAGCATTGTGA...TGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR TCA 90 bp GAAATGAAAATACTGAGATGCAAGCATTATAGCCCTCCTCCAAGTTACCTTTATCACTATTCTGCTGCCTaGATCATCTATTACTGGAGT +
Preference number: 4 (lower is better)
Translates to: EMKILRCKHYSPPPSYLYHYSAA*IIYYWS
Trigger: ACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTG...ATAAAGGTAACTTGGAGGAGGGCTATAATGCTTGCATCTCAGTATTTTCATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR TCA 90 bp GAAATGAAAATACTGAGATGCAAGCATTATAGCCCTCCTCCAAGTTACCTTTATCATTCTAGATGCGTCTaGAAGAAACAAGGTACACAC +
Preference number: 4 (lower is better)
Translates to: EMKILRCKHYSPPPSYLYHSRCV*KKQGTH
Trigger: GTGTGTACCTTGTTTCTTTCAGACGCATCTAGAATG...ATAAAGGTAACTTGGAGGAGGGCTATAATGCTTGCATCTCAGTATTTTCATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR TCA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGTTTTCTTGCACTTGGTaGGTTAACTCTTCAAAAACC +
Preference number: 4 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQFSCTW*VNSSKT
Trigger: GGTTTTTGAAGAGTTAACTCACCAAGTGCAAGAAAA...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400559.7
CDS-3UTR GCA 90 bp CAACAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCATCAATGTTTACAAACTaGTCCTCTTCGTTCATAGTG +
Preference number: 4 (lower is better)
Translates to: QQNTILLPESSITGVSSASMFTN*SSSFIV
Trigger: CACTATGAACGAAGAGGAGCAGTTTGTAAACATTGA...TGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR GCA 90 bp CAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCATGCCCAGTTTACAAACACTaGAAATGTTGTCATCATTCA +
Preference number: 4 (lower is better)
Translates to: QNTILLPESSITGVSSACPVYKH*KCCHHS
Trigger: TGAATGATGACAACATTTGCAGTGTTTGTAAACTGG...GCATGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR GCA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGCCAGTTTACAAACACTaGAAATGTTGTCATCATTCA +
Preference number: 4 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRPVYKH*KCCHHS
Trigger: TGAATGATGACAACATTTGCAGTGTTTGTAAACTGG...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR GCA 90 bp GAAATGAAAATACTGAGATGCAAGCATTATAGCCCTCCTCCAAGTTACCTTTATGTTAGAGATGCCACCTaGACTTCCATCTATCCATTT +
Preference number: 4 (lower is better)
Translates to: EMKILRCKHYSPPPSYLYVRDAT*TSIYPF
Trigger: AAATGGATAGATGGAAGTGCAGGTGGCATCTCTAAC...ATAAAGGTAACTTGGAGGAGGGCTATAATGCTTGCATCTCAGTATTTTCATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR GCA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGAACTTCTTCAAAGTTTaGATGTCTGGGAGACCAATA +
Preference number: 4 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQNFFKV*MSGRPI
Trigger: TATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTT...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR GCA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGACTGGCAGTCTGTTTTaGCACTTTTTAAACAGTAGT +
Preference number: 4 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQTGSLF*HFLNSS
Trigger: ACTACTGTTTAAAAAGTGGCAAAACAGACTGCCAGT...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CCA 90 bp CAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCATGCTGCATCCATACTCCCTaGATTTTAAATTCATTTTGC +
Preference number: 4 (lower is better)
Translates to: QNTILLPESSITGVSSACCIHTP*ILNSFC
Trigger: GCAAAATGAATTTAAAATCCAGGGAGTATGGATGCA...GCATGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CCA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGAACTCTTCAAAAACCTaGATTTGCTGTAGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQNSSKT*ICCRSF
Trigger: AAAGCTCCTACAGCAAATCCAGGTTTTTGAAGAGTT...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400559.7
CDS-3UTR GCA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGCCAGTTTACAAACACTaGAAATGTTGTCATCATTCA +
Preference number: 4 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQPVYKH*KCCHHS
Trigger: TGAATGATGACAACATTTGCAGTGTTTGTAAACTGG...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR GCA 90 bp GATGCGTCTGAAAGAAACAAGGTACACACACTTACTAAAATTCCCCTTTGCTTTTGTTGTATTCAGGACTaGAACTTATGGCTCATATTC +
Preference number: 4 (lower is better)
Translates to: DASERNKVHTLTKIPLCFCCIQD*NLWLIF
Trigger: GAATATGAGCCATAAGTTGCAGTCCTGAATACAACA...AAAGCAAAGGGGAATTTTAGTAAGTGTGTGTACCTTGTTTCTTTCAGACGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR GCA 90 bp CAACAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCAAAAACACTATTCTGCTaGCTGAATCATCTATTACTG +
Preference number: 4 (lower is better)
Translates to: QQNTILLPESSITGVSSAKTLFC*LNHLLL
Trigger: CAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTT...TGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR GCA 90 bp CAACAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCACTTAATAGGTTAGACTaGACCATAATCAAGGCAATT +
Preference number: 4 (lower is better)
Translates to: QQNTILLPESSITGVSSALNRLD*TIIKAI
Trigger: AATTGCCTTGATTATGGTGCAGTCTAACCTATTAAG...TGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CCA 90 bp GAAATGAAAATACTGAGATGCAAGCATTATAGCCCTCCTCCAAGTTACCTTTATGAATATTTTGGTACTTaGGAGTCAAACTGTGGGAGT +
Preference number: 4 (lower is better)
Translates to: EMKILRCKHYSPPPSYLYEYFGT*ESNCGS
Trigger: ACTCCCACAGTTTGACTCCCAAGTACCAAAATATTC...ATAAAGGTAACTTGGAGGAGGGCTATAATGCTTGCATCTCAGTATTTTCATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CCA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGTTTTGCAGAATATTTTaGTACTTGGGAGTCAAACTG +
Preference number: 4 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQFCRIF*YLGVKL
Trigger: CAGTTTGACTCCCAAGTACCAAAATATTCTGCAAAA...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CCA 90 bp GATGCGTCTGAAAGAAACAAGGTACACACACTTACTAAAATTCCCCTTTGCTTTTCTTCAAAAACTTCCTaGATTTGCTGTAGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: DASERNKVHTLTKIPLCFSSKTS*ICCRSF
Trigger: AAAGCTCCTACAGCAAATCCAGGAAGTTTTTGAAGA...AAAGCAAAGGGGAATTTTAGTAAGTGTGTGTACCTTGTTTCTTTCAGACGCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CCA 90 bp GATGCGTCTGAAAGAAACAAGGTACACACACTTACTAAAATTCCCCTTTGCTTTCTAAATTGCCTCTTTTaGAGGTACGGTGAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: DASERNKVHTLTKIPLCFLNCLF*RYGERK
Trigger: TTTTCTTTCACCGTACCTCCAAAAGAGGCAATTTAG...AAAGCAAAGGGGAATTTTAGTAAGTGTGTGTACCTTGTTTCTTTCAGACGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR GCA 90 bp GATGCGTCTGAAAGAAACAAGGTACACACACTTACTAAAATTCCCCTTTGCTTTTCATTTATATCTTTATaGATGAAGCTGCCACGTTAC +
Preference number: 4 (lower is better)
Translates to: DASERNKVHTLTKIPLCFSFISL*MKLPRY
Trigger: GTAACGTGGCAGCTTCATGCATAAAGATATAAATGA...AAAGCAAAGGGGAATTTTAGTAAGTGTGTGTACCTTGTTTCTTTCAGACGCATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CCA 90 bp GAAATGAAAATACTGAGATGCAAGCATTATAGCCCTCCTCCAAGTTACCTTTATTGTTACGACATAAAGTaGCACCTGAATCTTGTAACA +
Preference number: 4 (lower is better)
Translates to: EMKILRCKHYSPPPSYLYCYDIK*HLNLVT
Trigger: TGTTACAAGATTCAGGTGCCACTTTATGTCGTAACA...ATAAAGGTAACTTGGAGGAGGGCTATAATGCTTGCATCTCAGTATTTTCATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CCA 90 bp GAAATGAAAATACTGAGATGCAAGCATTATAGCCCTCCTCCAAGTTACCTTTATATGCATCACAGTCACTaGTGTGAAGCTAATAATGAA +
Preference number: 4 (lower is better)
Translates to: EMKILRCKHYSPPPSYLYMHHSH*CEANNE
Trigger: TTCATTATTAGCTTCACACCAGTGACTGTGATGCAT...ATAAAGGTAACTTGGAGGAGGGCTATAATGCTTGCATCTCAGTATTTTCATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
3UTR CAA 72 bp GCAAAGCTATGTATATTTGTCAGAAAACTCCTTTCTTaGGATAACACTGTTGTATTCAGGACTGCAACTTAT +
Preference number: 4 (lower is better)
Translates to: AKLCIFVRKLLS*DNTVVFRTATY
Trigger: ATAAGTTGCAGTCCTGAATACAACAGTGTTATCCAAAGAAAGGAGTTTTCTGACAAATATACATAGCTTTGC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS CCA 90 bp TTCACGGTACCGGCCGGGCACCGCCGGAGGGGCCCAAGCCGGAGCTaGGAGAGCCGCGGCATCCTGGAGCCCGGCGGGCGGGAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: FTVPAGHRRRGPSRS*ESRGILEPGGRESL
Trigger: GAGGCTCTCCCGCCCGCCGGGCTCCAGGATGCCGCGGCTCTCCCAGCTCCGGCTTGGGCCCCTCCGGCGGTGCCCGGCCGGTACCGTGAA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405964.2
CDS GCA 90 bp TTCATAGTGCCCCGTCCGGCTCCGCGGGCCACCACCGCCGTTCCGTaGGGCTCGGGTTCCTCCACTATTGTTTCCGGCCGCAGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: FIVPRPAPRATTAVP*GSGSSTIVSGRSRG
Trigger: GCCTCTGCTGCGGCCGGAAACAATAGTGGAGGAACCCGAGCCGCACGGAACGGCGGTGGTGGCCCGCGGAGCCGGACGGGGCACTATGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CAA 90 bp GGGAGACCAATAAAGGGCAGGGCATACGAAGTAAGTCTGTTTAGGTCAGTTGTTCGGGTTCCTCCACTATaGTTTCCGGCCGCAGCAGAG +
Preference number: 5 (lower is better)
Translates to: GRPIKGRAYEVSLFRSVVRVPPL*FPAAAE
Trigger: CTCTGCTGCGGCCGGAAACAATAGTGGAGGAACCCG...AACAACTGACCTAAACAGACTTACTTCGTATGCCCTGCCCTTTATTGGTCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400558.7
CDS-3UTR CAA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGCGGGTTCCTCCACTATaGTTTCCGGCCGCAGCAGAG +
Preference number: 5 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRRVPPL*FPAAAE
Trigger: CTCTGCTGCGGCCGGAAACAATAGTGGAGGAACCCG...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CAA 90 bp AGTTCTTCAGAAGCTGTTCGATGGCAACGTGGCGGACATGGAGCTGTGAGGCCAAAGGAGAGTGTTTCTTaGTCTGTTCCCAGTTTACAA +
Preference number: 5 (lower is better)
Translates to: SSSEAVRWQRGGHGAVRPKESVS*SVPSLQ
Trigger: TTGTAAACTGGGAACAGACAAAGAAACACTCTCCTT...TGGCCTCACAGCTCCATGTCCGCCACGTTGCCATCGAACAGCTTCTGAAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400558.7
CDS-3UTR CAA 90 bp AACTTAGAACAGTTCTTCAGAAGCTGTTCGATGGCAACGTGGCGGACATGGAGCTGGCCCCTTAATGATTaGGTGTGCAAGAGATCAGAC +
Preference number: 5 (lower is better)
Translates to: NLEQFFRSCSMATWRTWSWPLND*VCKRSD
Trigger: GTCTGATCTCTTGCACACCAAATCATTAAGGGGCCA...GCTCCATGTCCGCCACGTTGCCATCGAACAGCTTCTGAAGAACTGTTCTAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400558.7
CDS-3UTR CAA 90 bp GGGAGACCAATAAAGGGCAGGGCATACGAAGTAAGTCTGTTTAGGTCAGTTGTTGTCTGTTTAGGTCAGTaGTTTATGGGTAGGTGCGAC +
Preference number: 5 (lower is better)
Translates to: GRPIKGRAYEVSLFRSVVVCLGQ*FMGRCD
Trigger: GTCGCACCTACCCATAAACAACTGACCTAAACAGAC...AACAACTGACCTAAACAGACTTACTTCGTATGCCCTGCCCTTTATTGGTCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400558.7
CDS-3UTR CAA 90 bp AACTTAGAACAGTTCTTCAGAAGCTGTTCGATGGCAACGTGGCGGACATGGAGCAAACTTCTTCAAAGTTaGCATGTCTGGGAGACCAAT +
Preference number: 5 (lower is better)
Translates to: NLEQFFRSCSMATWRTWSKLLQS*HVWETN
Trigger: ATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTT...GCTCCATGTCCGCCACGTTGCCATCGAACAGCTTCTGAAGAACTGTTCTAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400558.7
CDS-3UTR CAA 90 bp GGGAGACCAATAAAGGGCAGGGCATACGAAGTAAGTCTGTTTAGGTCAGTTGTTGCAAGAGATCAGACTTaGGTACCCCCTCAATATTTA +
Preference number: 5 (lower is better)
Translates to: GRPIKGRAYEVSLFRSVVARDQT*VPPQYL
Trigger: TAAATATTGAGGGGGTACCAAAGTCTGATCTCTTGC...AACAACTGACCTAAACAGACTTACTTCGTATGCCCTGCCCTTTATTGGTCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400558.7
CDS-3UTR CAA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGTGGCCCCTTAATGATTaGGTGTGCAAGAGATCAGAC +
Preference number: 5 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRWPLND*VCKRSD
Trigger: GTCTGATCTCTTGCACACCAAATCATTAAGGGGCCA...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CAA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGGAGCTTTGCATTCAGTaGCTCTACCTCACCAAGAGT +
Preference number: 5 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRELCIQ*LYLTKS
Trigger: ACTCTTGGTGAGGTAGAGCAACTGAATGCAAAGCTC...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284881.9
ENST00000400559.7
CDS-3UTR CAA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGGTCTGTTTAGGTCAGTaGTTTATGGGTAGGTGCGAC +
Preference number: 5 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRVCLGQ*FMGRCD
Trigger: GTCGCACCTACCCATAAACAACTGACCTAAACAGAC...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CAA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGGTCTTTGCTCCACCATaGTGCATAGTCAACGACACA +
Preference number: 5 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRVFAPP*CIVNDT
Trigger: TGTGTCGTTGACTATGCACAATGGTGGAGCAAAGAC...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS TCA 90 bp AATCTATCTTTGTCTTCTTTCTGTAATCTCAGCTTCCTGGGAGACTaGGGTGGGAGAATTGCTCAAGGTCAGCCCTCAATATTTAGCTCA +
Preference number: 5 (lower is better)
Translates to: NLSLSSFCNLSFLGD*GGRIAQGQPSIFSS
Trigger: TGAGCTAAATATTGAGGGCTGACCTTGAGCAATTCTCCCACCTCAGTCTCCCAGGAAGCTGAGATTACAGAAAGAAGACAAAGATAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493464.1
CDS GCA 90 bp TCTTCAAAAACTTCCTGGATTTGCTGTAGGAGCTTTGCATTCAGTTaGTCTACCTCACCAAGAGTCATCGAATTCAATTCCTCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: SSKTSWICCRSFAFS*STSPRVIEFNSSLL
Trigger: CAGCAGAGAGGAATTGAATTCGATGACTCTTGGTGAGGTAGAGCAACTGAATGCAAAGCTCCTACAGCAAATCCAGGAAGTTTTTGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS GCA 90 bp AACTCTTCAAAAACCTGGATTTGCTGTAGGAGCTTTGCATTCAGTTaGTCTACCTCACCAAGAGTCATCGAATTCAATTCCTCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: NSSKTWICCRSFAFS*STSPRVIEFNSSLL
Trigger: CAGCAGAGAGGAATTGAATTCGATGACTCTTGGTGAGGTAGAGCAACTGAATGCAAAGCTCCTACAGCAAATCCAGGTTTTTGAAGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400559.7
CDS-3UTR CAA 90 bp GGGAGACCAATAAAGGGCAGGGCATACGAAGTAAGTCTGTTTAGGTCAGTTGTTATCCAGATCCTTATTTaGTGCATACTGCACAATCCA +
Preference number: 5 (lower is better)
Translates to: GRPIKGRAYEVSLFRSVVIQILI*CILHNP
Trigger: TGGATTGTGCAGTATGCACAAAATAAGGATCTGGAT...AACAACTGACCTAAACAGACTTACTTCGTATGCCCTGCCCTTTATTGGTCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400558.7
CDS-3UTR CAA 90 bp CAACAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCAGAGCTTTGCATTCAGTaGCTCTACCTCACCAAGAGT +
Preference number: 5 (lower is better)
Translates to: QQNTILLPESSITGVSSAELCIQ*LYLTKS
Trigger: ACTCTTGGTGAGGTAGAGCAACTGAATGCAAAGCTC...TGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CAA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGTCTGTTTAGGTCAGTaGTTTATGGGTAGGTGCGAC +
Preference number: 5 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQVCLGQ*FMGRCD
Trigger: GTCGCACCTACCCATAAACAACTGACCTAAACAGAC...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CAA 90 bp GATGCGTCTGAAAGAAACAAGGTACACACACTTACTAAAATTCCCCTTTGCTTTTGGCCCCTTAATGATTaGGTGTGCAAGAGATCAGAC +
Preference number: 5 (lower is better)
Translates to: DASERNKVHTLTKIPLCFWPLND*VCKRSD
Trigger: GTCTGATCTCTTGCACACCAAATCATTAAGGGGCCA...AAAGCAAAGGGGAATTTTAGTAAGTGTGTGTACCTTGTTTCTTTCAGACGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CAA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGAGAATATTTTGGTACTaGGGAGTCAAACTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRRIFWY*GVKLWE
Trigger: CTCCCACAGTTTGACTCCCAAGTACCAAAATATTCT...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CAA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGTTTGCTGTAGGAGCTTaGCATTCAGTTGCTCTACCT +
Preference number: 5 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQFAVGA*HSVALP
Trigger: AGGTAGAGCAACTGAATGCAAAGCTCCTACAGCAAA...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284881.9
ENST00000400559.7
CDS-3UTR CAA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGAAGGAGAGTGTTTCTTaGTCTGTTCCCAGTTTACAA +
Preference number: 5 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGRKESVS*SVPSLQ
Trigger: TTGTAAACTGGGAACAGACAAAGAAACACTCTCCTT...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CAA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGCAAGAGATCAGACTTaGGTACCCCCTCAATATTTA +
Preference number: 5 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQARDQT*VPPQYL
Trigger: TAAATATTGAGGGGGTACCAAAGTCTGATCTCTTGC...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CAA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGAGAATATTTTGGTACTaGGGAGTCAAACTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQRIFWY*GVKLWE
Trigger: CTCCCACAGTTTGACTCCCAAGTACCAAAATATTCT...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CAA 90 bp CAACAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCATACCATAGCCAGAAGTaGCTTAATAGGTTAGACTGC +
Preference number: 5 (lower is better)
Translates to: QQNTILLPESSITGVSSAYHSQK*LNRLDC
Trigger: GCAGTCTAACCTATTAAGCAACTTCTGGCTATGGTA...TGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CAA 90 bp CTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGGAGGACAACCCTGGTTaGCAATTAAATGGTATTTTT +
Preference number: 5 (lower is better)
Translates to: LSSNFFKVCMSGRPIKGREDNPG*QLNGIF
Trigger: AAAAATACCATTTAATTGCAAACCAGGGTTGTCCTC...CCTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CAA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGATCCAGATCCTTATTTaGTGCATACTGCACAATCCA +
Preference number: 5 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQIQILI*CILHNP
Trigger: TGGATTGTGCAGTATGCACAAAATAAGGATCTGGAT...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CAA 90 bp CAAAACACTATTCTGCTGCCTGAATCATCTATTACTGGAGTCTCAAGTGCATGCGGTAAGAATAAACTGTaGGGGGTTTTATCTCTTACT +
Preference number: 5 (lower is better)
Translates to: QNTILLPESSITGVSSACGKNKL*GVLSLT
Trigger: AGTAAGAGATAAAACCCCCAACAGTTTATTCTTACC...GCATGCACTTGAGACTCCAGTAATAGATGATTCAGGCAGCAGAATAGTGTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CAA 90 bp GAAATGAAAATACTGAGATGCAAGCATTATAGCCCTCCTCCAAGTTACCTTTATGCAAGAGATCAGACTTaGGTACCCCCTCAATATTTA +
Preference number: 5 (lower is better)
Translates to: EMKILRCKHYSPPPSYLYARDQT*VPPQYL
Trigger: TAAATATTGAGGGGGTACCAAAGTCTGATCTCTTGC...ATAAAGGTAACTTGGAGGAGGGCTATAATGCTTGCATCTCAGTATTTTCATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CAA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGGAGGACAACCCTGGTTaGCAATTAAATGGTATTTTT +
Preference number: 5 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQEDNPG*QLNGIF
Trigger: AAAAATACCATTTAATTGCAAACCAGGGTTGTCCTC...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
CDS-3UTR CAA 90 bp GATGCGTCTGAAAGAAACAAGGTACACACACTTACTAAAATTCCCCTTTGCTTTATCCAGATCCTTATTTaGTGCATACTGCACAATCCA +
Preference number: 5 (lower is better)
Translates to: DASERNKVHTLTKIPLCFIQILI*CILHNP
Trigger: TGGATTGTGCAGTATGCACAAAATAAGGATCTGGAT...AAAGCAAAGGGGAATTTTAGTAAGTGTGTGTACCTTGTTTCTTTCAGACGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CAA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGCAAGTTACCTTTATTTaGTGTGAGGGCTCTAGTATT +
Preference number: 5 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQQVTFI*CEGSSI
Trigger: AATACTAGAGCCCTCACACAAAATAAAGGTAACTTG...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CAA 90 bp ACTTTCTTCAAACTTCTTCAAAGTTTGCATGTCTGGGAGACCAATAAAGGGCAGTTAATACTTTCTAAATaGCCTCTTTTGGAGGTACGG +
Preference number: 5 (lower is better)
Translates to: TFFKLLQSLHVWETNKGQLILSK*PLLEVR
Trigger: CCGTACCTCCAAAAGAGGCAATTTAGAAAGTATTAA...CTGCCCTTTATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTTGAAGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CAA 90 bp GATGCGTCTGAAAGAAACAAGGTACACACACTTACTAAAATTCCCCTTTGCTTTGAGGACAACCCTGGTTaGCAATTAAATGGTATTTTT +
Preference number: 5 (lower is better)
Translates to: DASERNKVHTLTKIPLCFEDNPG*QLNGIF
Trigger: AAAAATACCATTTAATTGCAAACCAGGGTTGTCCTC...AAAGCAAAGGGGAATTTTAGTAAGTGTGTGTACCTTGTTTCTTTCAGACGCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CAA 90 bp GAAATGAAAATACTGAGATGCAAGCATTATAGCCCTCCTCCAAGTTACCTTTATAAACTTCTTCAAAGTTaGCATGTCTGGGAGACCAAT +
Preference number: 5 (lower is better)
Translates to: EMKILRCKHYSPPPSYLYKLLQS*HVWETN
Trigger: ATTGGTCTCCCAGACATGCAAACTTTGAAGAAGTTT...ATAAAGGTAACTTGGAGGAGGGCTATAATGCTTGCATCTCAGTATTTTCATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS-3UTR CAA 90 bp GAAATGAAAATACTGAGATGCAAGCATTATAGCCCTCCTCCAAGTTACCTTTATGAACGTGAAAAAGATTaGTCTTATCTCACTCCCCTT +
Preference number: 5 (lower is better)
Translates to: EMKILRCKHYSPPPSYLYEREKD*SYLTPL
Trigger: AAGGGGAGTGAGATAAGACAAATCTTTTTCACGTTC...ATAAAGGTAACTTGGAGGAGGGCTATAATGCTTGCATCTCAGTATTTTCATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS CCA 72 bp GGGGCCCAAGCCGGAGCTGGGAGAGCCGCGGCATCCTaGAGCCCGGCGGGCGGGAGAGCCTCGTCCCATCGC +
Preference number: 6 (lower is better)
Translates to: GAQAGAGRAAAS*SPAGGRASSHR
Trigger: GCGATGGGACGAGGCTCTCCCGCCCGCCGGGCTCCAGGATGCCGCGGCTCTCCCAGCTCCGGCTTGGGCCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405964.2
CDS GCA 72 bp CCCCGTCCGGCTCCGCGGGCCACCACCGCCGTTCCGTaGGGCTCGGGTTCCTCCACTATTGTTTCCGGCCGC +
Preference number: 6 (lower is better)
Translates to: PRPAPRATTAVP*GSGSSTIVSGR
Trigger: GCGGCCGGAAACAATAGTGGAGGAACCCGAGCCGCACGGAACGGCGGTGGTGGCCCGCGGAGCCGGACGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400558.7
ENST00000400559.7
CDS CAA 72 bp GTAATCTCAGCTTCCTGGGAGACTGAGGTGGGAGAATaGCTCAAGGTCAGCCCTCAATATTTAGCTCAAAAC +
Preference number: 6 (lower is better)
Translates to: VISASWETEVGE*LKVSPQYLAQN
Trigger: GTTTTGAGCTAAATATTGAGGGCTGACCTTGAGCAATTCTCCCACCTCAGTCTCCCAGGAAGCTGAGATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493464.1
CDS GCA 72 bp ACTTCCTGGATTTGCTGTAGGAGCTTTGCATTCAGTTaGTCTACCTCACCAAGAGTCATCGAATTCAATTCC +
Preference number: 6 (lower is better)
Translates to: TSWICCRSFAFS*STSPRVIEFNS
Trigger: GGAATTGAATTCGATGACTCTTGGTGAGGTAGAGCAACTGAATGCAAAGCTCCTACAGCAAATCCAGGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS CAA 72 bp ACTCTTCAAAAACTTCCTGGATTTGCTGTAGGAGCTTaGCATTCAGTTGCTCTACCTCACCAAGAGTCATCG +
Preference number: 6 (lower is better)
Translates to: TLQKLPGFAVGA*HSVALPHQESS
Trigger: CGATGACTCTTGGTGAGGTAGAGCAACTGAATGCAAAGCTCCTACAGCAAATCCAGGAAGTTTTTGAAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284881.9
CDS GCA 72 bp AAAACCTGGATTTGCTGTAGGAGCTTTGCATTCAGTTaGTCTACCTCACCAAGAGTCATCGAATTCAATTCC +
Preference number: 6 (lower is better)
Translates to: KTWICCRSFAFS*STSPRVIEFNS
Trigger: GGAATTGAATTCGATGACTCTTGGTGAGGTAGAGCAACTGAATGCAAAGCTCCTACAGCAAATCCAGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400559.7
CDS CAA 72 bp TTAACTCTTCAAAAACCTGGATTTGCTGTAGGAGCTTaGCATTCAGTTGCTCTACCTCACCAAGAGTCATCG +
Preference number: 6 (lower is better)
Translates to: LTLQKPGFAVGA*HSVALPHQESS
Trigger: CGATGACTCTTGGTGAGGTAGAGCAACTGAATGCAAAGCTCCTACAGCAAATCCAGGTTTTTGAAGAGTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400559.7
CDS CCA 72 bp AGCTTAGATCGAGGACAACCCTGGTTTGCAATTAAATaGTATTTTTCAAAGCAGTCTTTATGGCCCCTTAAT +
Preference number: 6 (lower is better)
Translates to: SLDRGQPWFAIK*YFSKQSLWPLN
Trigger: ATTAAGGGGCCATAAAGACTGCTTTGAAAAATACCATTTAATTGCAAACCAGGGTTGTCCTCGATCTAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284881.9
ENST00000400558.7
ENST00000400559.7
ENST00000405964.2
ENST00000493464.1