RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C21ORF58 (Homo sapiens)

Ensembl gene IDs: ENSG00000160298

Ensembl transcript IDs: ENST00000291691.12, ENST00000397679.5, ENST00000397680.5, ENST00000397682.7, ENST00000397683.5, ENST00000417060.5, ENST00000445935.5, ENST00000472607.1, ENST00000475776.1, ENST00000491666.5

Found 690 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGGAGGAGCCTGCAGTCCACACTCGCGTAGCCACTCCGGGTGGTaGCAGGGTCTCTCCCTGCTCCCTTCCATAGTCCCGCCACAGCCC +
Preference number: 1 (lower is better)
Translates to: PGGACSPHSRSHSGW*QGLSLLPSIVPPQP
Trigger: GGGCTGTGGCGGGACTATGGAAGGGAGCAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGACTGCAGGCTCCTCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
3UTR CCA 90 bp TCCCCAGGAGGAGCCTGCAGTCCACACTCGCGTAGCCACTCCGGGTaGTGGCAGGGTCTCTCCCTGCTCCCTTCCATAGTCCCGCCACAG +
Preference number: 1 (lower is better)
Translates to: SPGGACSPHSRSHSG*WQGLSLLPSIVPPQ
Trigger: CTGTGGCGGGACTATGGAAGGGAGCAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGACTGCAGGCTCCTCCTGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
3UTR GCA 90 bp GCTCTGCAGCTCAGTGGCAACTCTCTGGTCATCCTGTCTCCTACCTaGAAACTTTCAAAGATGGAAGCACTGGGACAGGGTTCCTCCTTG +
Preference number: 1 (lower is better)
Translates to: ALQLSGNSLVILSPT*KLSKMEALGQGSSL
Trigger: CAAGGAGGAACCCTGTCCCAGTGCTTCCATCTTTGAAAGTTTGCAGGTAGGAGACAGGATGACCAGAGAGTTGCCACTGAGCTGCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000491666.5
3UTR CCA 90 bp TTTCTTAAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTaGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGA +
Preference number: 1 (lower is better)
Translates to: FLKLFLDEIFISSGW*RPRPQLYLRDGRGG
Trigger: TCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTTAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
3UTR CCA 90 bp GATTTTCTTAAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTaGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGG +
Preference number: 1 (lower is better)
Translates to: DFLKLFLDEIFISSG*WRPRPQLYLRDGRG
Trigger: CCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTTAAGAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
3UTR CCA 90 bp GAGTCTGAGCTTTGGTTTGAGCTTTTAACGAGAGCACAGAGTCTCTaGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGT +
Preference number: 1 (lower is better)
Translates to: ESELWFELLTRAQSL*NHLQEARKDGSERS
Trigger: ACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGTTAAAAGCTCAAACCAAAGCTCAGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000491666.5
3UTR-3UTR CCA 90 bp GTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGCTCCCTTAGCCCTGAGGAAGCCTaGGGGTGGAGGGTGCCCCGG +
Preference number: 2 (lower is better)
Translates to: VHTRVATPGGGRVSPCSLSPEEA*GWRVPR
Trigger: CCGGGGCACCCTCCACCCCCAGGCTTCCTCAGGGCT...AAGGGAGCAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
3UTR-3UTR GCA 90 bp TCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGAACCCGGAGCAAGGGATaGCCCCTGGAATGGCCCCGT +
Preference number: 2 (lower is better)
Translates to: SGWWRPRPQLYLRDGRGGTRSKG*PLEWPR
Trigger: ACGGGGCCATTCCAGGGGGCATCCCTTGCTCCGGGT...TCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
3UTR-3UTR CCA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACTCTGAGGCTCCCAGGTaGGCCGGCGCCGCCCTACAG +
Preference number: 2 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHSEAPR*AGAALQ
Trigger: CTGTAGGGCGGCGCCGGCCCACCTGGGAGCCTCAGA...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
3UTR-3UTR CCA 90 bp CACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCCCTCTGAGGCTCCCAGGTaGGCCGGCGCCGCCCTACAG +
Preference number: 2 (lower is better)
Translates to: HPYFFSGSLCHSCGHRCPSEAPR*AGAALQ
Trigger: CTGTAGGGCGGCGCCGGCCCACCTGGGAGCCTCAGA...GGGACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
3UTR-3UTR TCA 90 bp ACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCAGAGCTCATGGAAGAGGGGGATCTaGGGCTCCCAGGTGGGCCGG +
Preference number: 2 (lower is better)
Translates to: TGACSVVQAIVQWFHQSSWKRGI*GSQVGR
Trigger: CCGGCCCACCTGGGAGCCTCAGATCCCCCTCTTCCA...TGAGCTCTGATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
3UTR-3UTR GCA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACTCACAGGCCCCTCACTaGAGGGGACCCGGAGCAAGG +
Preference number: 2 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHSQAPH*RGPGAR
Trigger: CCTTGCTCCGGGTCCCCTGCAGTGAGGGGCCTGTGA...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
3UTR-3UTR GCA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACCCTGGGAGGGGCTGTTaGCCTGGTGGGGTTCACAGG +
Preference number: 2 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHPGRGC*PGGVHR
Trigger: CCTGTGAACCCCACCAGGGCAACAGCCCCTCCCAGG...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
3UTR-3UTR CCA 90 bp ACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCAGAGCTCAGAAAGGAGGGGTCCCTaGGAGGGGCTGTTGCCCTGG +
Preference number: 2 (lower is better)
Translates to: TGACSVVQAIVQWFHQSSERRGP*EGLLPW
Trigger: CCAGGGCAACAGCCCCTCCCAGGGACCCCTCCTTTC...TGAGCTCTGATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
3UTR-3UTR CCA 90 bp ATTTTTGAGACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATAGCCCTGAGGAAGCCTaGGGGTGGAGGGTGCCCCGG +
Preference number: 2 (lower is better)
Translates to: IFETGACSVVQAIVQWFHSPEEA*GWRVPR
Trigger: CCGGGGCACCCTCCACCCCCAGGCTTCCTCAGGGCT...ATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGTCTCAAAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
3UTR-3UTR CCA 90 bp ACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCAGAGCTCAGCAAGGGATGCCCCCTaGAATGGCCCCGTGACCAGA +
Preference number: 2 (lower is better)
Translates to: TGACSVVQAIVQWFHQSSARDAP*NGPVTR
Trigger: TCTGGTCACGGGGCCATTCCAGGGGGCATCCCTTGC...TGAGCTCTGATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
3UTR-3UTR CCA 90 bp CTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCAGCTCTGCAGCTCAGTaGCAACTCTCTGGTCATCCT +
Preference number: 2 (lower is better)
Translates to: LGPSVFTPARPCQHQVAVSSAAQ*QLSGHP
Trigger: AGGATGACCAGAGAGTTGCCACTGAGCTGCAGAGCT...GACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
3UTR-3UTR GCA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACACCAGAAAGCGAGCCTaGCCAGCTTCCCCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHTRKRA*PASPGG
Trigger: TCCTCCTGGGGAAGCTGGGCAGGCTCGCTTTCTGGT...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
3UTR-3UTR CCA 90 bp GAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTAGCCCTGAGGAAGCCTaGGGGTGGAGGGTGCCCCGG +
Preference number: 2 (lower is better)
Translates to: EIFISSGWWRPRPQLYLRSPEEA*GWRVPR
Trigger: CCGGGGCACCCTCCACCCCCAGGCTTCCTCAGGGCT...ACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
3UTR-3UTR TCA 90 bp GAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTTGGAAGAGGGGGATCTaGGGCTCCCAGGTGGGCCGG +
Preference number: 2 (lower is better)
Translates to: EIFISSGWWRPRPQLYLRWKRGI*GSQVGR
Trigger: CCGGCCCACCTGGGAGCCTCAGATCCCCCTCTTCCA...ACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
3UTR-3UTR CCA 90 bp GTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCACAAAGATGGAAGCACTaGGACAGGGTTCCTCCTTGT +
Preference number: 2 (lower is better)
Translates to: VLLPVAALGPSVFTPARPQRWKH*DRVPPC
Trigger: ACAAGGAGGAACCCTGTCCCAGTGCTTCCATCTTTG...TGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000491666.5
3UTR-3UTR CCA 90 bp GAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGGATGCCCCCTGGAATaGCCCCGTGACCAGAAAGCG +
Preference number: 2 (lower is better)
Translates to: EIFISSGWWRPRPQLYLRGCPLE*PRDQKA
Trigger: CGCTTTCTGGTCACGGGGCCATTCCAGGGGGCATCC...ACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
3UTR-3UTR CCA 90 bp GAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGCAAGGGATGCCCCCTaGAATGGCCCCGTGACCAGA +
Preference number: 2 (lower is better)
Translates to: EIFISSGWWRPRPQLYLRARDAP*NGPVTR
Trigger: TCTGGTCACGGGGCCATTCCAGGGGGCATCCCTTGC...ACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
3UTR-3UTR GCA 90 bp GAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTACCAGAAAGCGAGCCTaGCCAGCTTCCCCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: EIFISSGWWRPRPQLYLRTRKRA*PASPGG
Trigger: TCCTCCTGGGGAAGCTGGGCAGGCTCGCTTTCTGGT...ACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
3UTR-3UTR CCA 90 bp CACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCCCTTTATTTCATCAGGCTaGTGGCGTCCACGGCCTCAA +
Preference number: 2 (lower is better)
Translates to: HPYFFSGSLCHSCGHRCPFISSG*WRPRPQ
Trigger: TTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAA...GGGACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
3UTR-3UTR CCA 90 bp GAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGACCAGGTGGCTGTCCCTaGGGAGCTCTGCAGCTCAGT +
Preference number: 2 (lower is better)
Translates to: EHRVSGITFKRHEKMVLRPGGCP*GALQLS
Trigger: ACTGAGCTGCAGAGCTCCCCAGGGACAGCCACCTGG...TCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
3UTR-3UTR CCA 90 bp TTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTGGATGCCCCCTGGAATaGCCCCGTGACCAGAAAGCG +
Preference number: 2 (lower is better)
Translates to: FLDEIFISSGWWRPRPQLGCPLE*PRDQKA
Trigger: CGCTTTCTGGTCACGGGGCCATTCCAGGGGGCATCC...AAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
3UTR-3UTR CCA 90 bp ATTTTTGAGACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATATTTCATCAGGCTGGTaGCGTCCACGGCCTCAACTT +
Preference number: 2 (lower is better)
Translates to: IFETGACSVVQAIVQWFHISSGW*RPRPQL
Trigger: AAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAAT...ATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGTCTCAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
3UTR-3UTR CCA 90 bp GAGCTTTGGTTTGAGCTTTTAACGAGAGCACAGAGTCTCTGGAATCACCTTCAACCAGGTGGCTGTCCCTaGGGAGCTCTGCAGCTCAGT +
Preference number: 2 (lower is better)
Translates to: ELWFELLTRAQSLWNHLQPGGCP*GALQLS
Trigger: ACTGAGCTGCAGAGCTCCCCAGGGACAGCCACCTGG...TTGAAGGTGATTCCAGAGACTCTGTGCTCTCGTTAAAAGCTCAAACCAAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000491666.5
3UTR-3UTR TCA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACTTCTGTTCTGGCTCCTaGGCTGAGATTTTCTTAAAC +
Preference number: 2 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHFCSGS*AEIFLN
Trigger: GTTTAAGAAAATCTCAGCTCAGGAGCCAGAACAGAA...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
3UTR-3UTR TCA 90 bp ACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCAGAGCTCATTCTGGCTCCTGAGCTaGGATTTTCTTAAACTCTTT +
Preference number: 2 (lower is better)
Translates to: TGACSVVQAIVQWFHQSSFWLLS*DFLKLF
Trigger: AAAGAGTTTAAGAAAATCTCAGCTCAGGAGCCAGAA...TGAGCTCTGATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
3UTR-3UTR TCA 90 bp TGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCTTCTGGCTCCTGAGCTaGGATTTTCTTAAACTCTTT +
Preference number: 2 (lower is better)
Translates to: CTPTSLVGVCATAVDTGVFWLLS*DFLKLF
Trigger: AAAGAGTTTAAGAAAATCTCAGCTCAGGAGCCAGAA...GACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
3UTR-3UTR CCA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACGTTCACACTTCCATGTaGCTAAAGCTATTGATCTTT +
Preference number: 2 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHVHTSM*LKLLIF
Trigger: AAAGATCAATAGCTTTAGCCACATGGAAGTGTGAAC...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
3UTR-3UTR CCA 90 bp AACGAGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCCAAAGATGGAAGCACTaGGACAGGGTTCCTCCTTGT +
Preference number: 2 (lower is better)
Translates to: NESTESLESPSRGTKRWFQRWKH*DRVPPC
Trigger: ACAAGGAGGAACCCTGTCCCAGTGCTTCCATCTTTG...GAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000491666.5
3UTR-3UTR CCA 90 bp GAGTCTGAGCTTTGGTTTGAGCTTTTAACGAGAGCACAGAGTCTCTGGAATCACAGCTCTGCAGCTCAGTaGCAACTCTCTGGTCATCCT +
Preference number: 2 (lower is better)
Translates to: ESELWFELLTRAQSLWNHSSAAQ*QLSGHP
Trigger: AGGATGACCAGAGAGTTGCCACTGAGCTGCAGAGCT...GTGATTCCAGAGACTCTGTGCTCTCGTTAAAAGCTCAAACCAAAGCTCAGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000491666.5
3UTR-3UTR CCA 90 bp TCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTGAGTGTTAGCTCTGCAGCTCAGTaGCAACTCTCTGGTCATCCT +
Preference number: 2 (lower is better)
Translates to: SGITFKRHEKMVLREVSVSSAAQ*QLSGHP
Trigger: AGGATGACCAGAGAGTTGCCACTGAGCTGCAGAGCT...AACACTCACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
3UTR-3UTR CCA 90 bp GTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTGAGTGCAAACTTTCAAAGATaGAAGCACTGGGACAGGGTT +
Preference number: 2 (lower is better)
Translates to: VSGITFKRHEKMVLREVSANFQR*KHWDRV
Trigger: AACCCTGTCCCAGTGCTTCCATCTTTGAAAGTTTGC...ACTCACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000491666.5
3UTR CCA 72 bp CTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTaGGCCGGCGCCGCCCTACAGGAAAGGAGGGGTCCC +
Preference number: 3 (lower is better)
Translates to: LRDGRGGSEAPR*AGAALQERRGP
Trigger: GGGACCCCTCCTTTCCTGTAGGGCGGCGCCGGCCCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
3UTR GCA 72 bp GCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTaGCCGTCCATGTCAGCACCAGGTGGCTGTCCCTGG +
Preference number: 3 (lower is better)
Translates to: ASSCAGPFGVHT*PSMSAPGGCPW
Trigger: CCAGGGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
3UTR CCA 72 bp GGAGCCTGCAGTCCACACTCGCGTAGCCACTCCGGGTaGTGGCAGGGTCTCTCCCTGCTCCCTTCCATAGTC +
Preference number: 3 (lower is better)
Translates to: GACSPHSRSHSG*WQGLSLLPSIV
Trigger: GACTATGGAAGGGAGCAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGACTGCAGGCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
3UTR GCA 72 bp ATGGTTCTGAGAGAAGTGAGTGTTACTGCCAGTAGCTaGGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCC +
Preference number: 3 (lower is better)
Translates to: MVLREVSVTASS*AGPFGVHTCPS
Trigger: GGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACACTCACTTCTCTCAGAACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
3UTR-3UTR CAA 90 bp TTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTCCCTGGGAGGGGCTGTaGCCCTGGTGGGGTTCACAG +
Preference number: 3 (lower is better)
Translates to: FLDEIFISSGWWRPRPQLPWEGL*PWWGSQ
Trigger: CTGTGAACCCCACCAGGGCAACAGCCCCTCCCAGGG...AAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
3UTR-3UTR CAA 90 bp AGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGGGACAGGGTTCCTCCTaGTGCGGAACTTCAGGAATG +
Preference number: 3 (lower is better)
Translates to: RAQSLWNHLQEARKDGSEGQGSS*CGTSGM
Trigger: CATTCCTGAAGTTCCGCACAAGGAGGAACCCTGTCC...CTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397683.5
3UTR CCA 72 bp CTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTaGCGTCCACGGCCTCAACTTTACCTCCGTGATGGA +
Preference number: 3 (lower is better)
Translates to: LFLDEIFISSGW*RPRPQLYLRDG
Trigger: TCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
3UTR CCA 72 bp AAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTaGTGGCGTCCACGGCCTCAACTTTACCTCCGTGAT +
Preference number: 3 (lower is better)
Translates to: KLFLDEIFISSG*WRPRPQLYLRD
Trigger: ATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
3UTR CCA 72 bp CTTTGGTTTGAGCTTTTAACGAGAGCACAGAGTCTCTaGAATCACCTTCAAGAGGCACGAAAAGATGGTTCT +
Preference number: 3 (lower is better)
Translates to: LWFELLTRAQSL*NHLQEARKDGS
Trigger: AGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGTTAAAAGCTCAAACCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000491666.5
CDS-3UTR CCA 90 bp CGGGTGGTGGCAGGGTCTCTCCCTGCTCCCTTCCATAGTCCCGCCACAGCCCACGAGGGCTCCTCTGCTTaGCCCGCTCCAGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RVVAGSLPAPFHSPATAHEGSSA*PAPGLG
Trigger: GCCCAGGCCTGGAGCGGGCCAAGCAGAGGAGCCCTC...GTGGGCTGTGGCGGGACTATGGAAGGGAGCAGGGAGAGACCCTGCCACCACCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp CGGGTGGTGGCAGGGTCTCTCCCTGCTCCCTTCCATAGTCCCGCCACAGCCCACGCGGGCCTTACCTCCTaGAGACCAGCGCGCGCGCCA +
Preference number: 4 (lower is better)
Translates to: RVVAGSLPAPFHSPATAHAGLTS*RPARAP
Trigger: TGGCGCGCGCGCTGGTCTCCAGGAGGTAAGGCCCGC...GTGGGCTGTGGCGGGACTATGGAAGGGAGCAGGGAGAGACCCTGCCACCACCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397680.5
CDS-3UTR TCA 90 bp GTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGCTCCCTTTACGCGCGCGCCAGCTaGGAAAACGCCCACCCCGGC +
Preference number: 4 (lower is better)
Translates to: VHTRVATPGGGRVSPCSLYARAS*ENAHPG
Trigger: GCCGGGGTGGGCGTTTTCTCAGCTGGCGCGCGCGTA...AAGGGAGCAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291691.12
CDS-3UTR GCA 90 bp ACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGGCCGGCGCCGCCAACAGGTCACAGGCGGTaGGGACCCCGGGACTGTGTC +
Preference number: 4 (lower is better)
Translates to: TSVMEEGDLRLPGGPAPPTGHRR*GPRDCV
Trigger: GACACAGTCCCGGGGTCCGCACCGCCTGTGACCTGT...TGGCGGCGCCGGCCCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397682.7
CDS-3UTR CCA 90 bp GCCTGCAGTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGCCCGGCCCGCTGTCCTaGTGGACACAAAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: ACSPHSRSHSGWWQGLSLPGPLS*WTQSPG
Trigger: CCCTGGGCTTTGTGTCCACCAGGACAGCGGGCCGGG...CAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGACTGCAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397680.5
CDS-3UTR CCA 90 bp GCCTGCAGTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGGGGATGGGGAGGCAGTaGGTAGGATGCCCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: ACSPHSRSHSGWWQGLSLGMGRQ*VGCPWG
Trigger: CCCCCACGGGCATCCTACCCACTGCCTCCCCATCCC...CAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGACTGCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp GCCTGCAGTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGGATCCTTGGCGGGTCTaGGGCCAGCGGGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: ACSPHSRSHSGWWQGLSLDPWRV*GQRGWG
Trigger: TCCCCATCCCCGCTGGCCCCAGACCCGCCAAGGATC...CAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGACTGCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp GCCTGCAGTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGCGGGCTGGAGGACAGTaGCAGCCCCAGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: ACSPHSRSHSGWWQGLSLRAGGQ*QPQVAT
Trigger: TGTGGCCACCTGGGGCTGCCACTGTCCTCCAGCCCG...CAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGACTGCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp GTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGCTCCCTTTCTGAGGCTCCCAGGTaGGCCGGCGCCGCCCTACAG +
Preference number: 4 (lower is better)
Translates to: VHTRVATPGGGRVSPCSLSEAPR*AGAALQ
Trigger: CTGTAGGGCGGCGCCGGCCCACCTGGGAGCCTCAGA...AAGGGAGCAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp CGGGTGGTGGCAGGGTCTCTCCCTGCTCCCTTCCATAGTCCCGCCACAGCCCACAGGCTCAGGCCAGCCTaGGCCAGGTACAGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: RVVAGSLPAPFHSPATAHRLRPA*ARYRRL
Trigger: GAGGCGCCTGTACCTGGCCCAGGCTGGCCTGAGCCT...GTGGGCTGTGGCGGGACTATGGAAGGGAGCAGGGAGAGACCCTGCCACCACCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp GCCTGCAGTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGCCCAAGCACCGGTGTTaGCTGCAGGGCGGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: ACSPHSRSHSGWWQGLSLPKHRC*LQGGPY
Trigger: GTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGG...CAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGACTGCAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp GTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGCTCCCTTACCCGAGGGCTCCTCTaGTTGGCCCGCTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: VHTRVATPGGGRVSPCSLTRGLL*LARSRP
Trigger: AGGCCTGGAGCGGGCCAAGCAGAGGAGCCCTCGGGT...AAGGGAGCAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp CTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCTGGGGACATGTGGCGGGTCCTaGAGGGCTGGGGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LRCSHLPVHVSTRWLSLGTCGGS*RAGGRA
Trigger: GGCCCTGCCCCCAGCCCTGCAGGACCCGCCACATGT...CCCCAGGGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000417060.5
CDS-3UTR GCA 90 bp GCCTGCAGTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGTGGTGGTGGTGGTGGTaGACGGCAGGCAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: ACSPHSRSHSGWWQGLSLWWWWW*TAGSLG
Trigger: GCCAAGGCTGCCTGCCGTGCACCACCACCACCACCA...CAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGACTGCAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp CGGGTGGTGGCAGGGTCTCTCCCTGCTCCCTTCCATAGTCCCGCCACAGCCCACACCCGGAGCAAGGGATaGCCCCTGGAATGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: RVVAGSLPAPFHSPATAHTRSKG*PLEWPR
Trigger: ACGGGGCCATTCCAGGGGGCATCCCTTGCTCCGGGT...GTGGGCTGTGGCGGGACTATGGAAGGGAGCAGGGAGAGACCCTGCCACCACCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp GCCTGCAGTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGTCACAGGCCCCTCACTaGAGGGGACCCGGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: ACSPHSRSHSGWWQGLSLSQAPH*RGPGAR
Trigger: CCTTGCTCCGGGTCCCCTGCAGTGAGGGGCCTGTGA...CAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGACTGCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp GCCTGCAGTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGGCGCCGCGTGACAGTTaGCAGGCTGCCAGACACAGG +
Preference number: 4 (lower is better)
Translates to: ACSPHSRSHSGWWQGLSLAPRDS*QAARHR
Trigger: CCTGTGTCTGGCAGCCTGGCAACTGTCACGCGGCGC...CAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGACTGCAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR CCA 90 bp ACCCGGAGCAAGGGATGCCCCCTGGAATGGCCCCGTGACCAGAAAGCGAGCCTGCCCGGCCCGCTGTCCTaGTGGACACAAAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TRSKGCPLEWPRDQKASLPGPLS*WTQSPG
Trigger: CCCTGGGCTTTGTGTCCACCAGGACAGCGGGCCGGG...CAGGCTCGCTTTCTGGTCACGGGGCCATTCCAGGGGGCATCCCTTGCTCCGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397680.5
CDS-3UTR CCA 90 bp GGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCTGAGGGCTCCTCTGCTTaGCCCGCTCCAGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GPSVFTPARPCQHQVAVPEGSSA*PAPGLG
Trigger: GCCCAGGCCTGGAGCGGGCCAAGCAGAGGAGCCCTC...AGGGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp CTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCGAGGGCTCCTCTGCTTaGCCCGCTCCAGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LGPSVFTPARPCQHQVAVEGSSA*PAPGLG
Trigger: GCCCAGGCCTGGAGCGGGCCAAGCAGAGGAGCCCTC...GACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp GTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGCTCCCTTTGGGTAGGATGCCCGTaGGGGGCAGCTCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: VHTRVATPGGGRVSPCSLWVGCP*GAALGA
Trigger: TGCCCCCAGAGCTGCCCCCCACGGGCATCCTACCCA...AAGGGAGCAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR TCA 90 bp CGGGTGGTGGCAGGGTCTCTCCCTGCTCCCTTCCATAGTCCCGCCACAGCCCACCCCTTGCGGATCCCCTaGGATCCACCTCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RVVAGSLPAPFHSPATAHPLRIP*DPPQQP
Trigger: AGGCTGCTGAGGTGGATCTCAGGGGATCCGCAAGGG...GTGGGCTGTGGCGGGACTATGGAAGGGAGCAGGGAGAGACCCTGCCACCACCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397680.5
CDS-3UTR TCA 90 bp CGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGGCGCTGGGCGCCGCGTaGCAGTTGCCAGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RPQLYLRDGRGGSEAPRWALGAA*QLPGCQ
Trigger: CTGGCAGCCTGGCAACTGTCACGCGGCGCCCAGCGC...CCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR GCA 90 bp CGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCCCAAGCGGCGGGGCCTaGAGGTCCAGGCGGTTCGCG +
Preference number: 4 (lower is better)
Translates to: RPRPQLYLRDGRGGSEAPPSGGA*RSRRFA
Trigger: CGCGAACCGCCTGGACCTGCAGGCCCCGCCGCTTGG...GGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp GCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCAACCCGAGGGCTCCTCTaGTTGGCCCGCTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: ASSCAGPFGVHTCPSMSATRGLL*LARSRP
Trigger: AGGCCTGGAGCGGGCCAAGCAGAGGAGCCCTCGGGT...TGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp CGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGAGGCCGATGCAGAGCTaGTGCACACGGGGACGGGGA +
Preference number: 4 (lower is better)
Translates to: RWALRCSHLPVHVSTRWLRPMQS*CTRGRG
Trigger: TCCCCGTCCCCGTGTGCAGCAGCTCTGCATCGGCCT...CAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR GCA 90 bp ACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGGCCGGCGCCGCCATTCCTGCAAGGCCGATaGAGAGCTGCTGCACACGGG +
Preference number: 4 (lower is better)
Translates to: TSVMEEGDLRLPGGPAPPFLQGR*RAAAHG
Trigger: CCCGTGTGCAGCAGCTCTGCATCGGCCTTGCAGGAA...TGGCGGCGCCGGCCCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397682.7
CDS-3UTR CCA 90 bp GTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGGAGGGCTCCTCTGCTTaGCCCGCTCCAGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: VTASSCAGPFGVHTCPSMEGSSA*PAPGLG
Trigger: GCCCAGGCCTGGAGCGGGCCAAGCAGAGGAGCCCTC...CATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp TGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCTGGGTAGGATGCCCGTaGGGGGCAGCTCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: WALRCSHLPVHVSTRWLSWVGCP*GAALGA
Trigger: TGCCCCCAGAGCTGCCCCCCACGGGCATCCTACCCA...GGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp GCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCTGGATCCTTGGCGGGTCTaGGGCCAGCGGGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: ALRCSHLPVHVSTRWLSLDPWRV*GQRGWG
Trigger: TCCCCATCCCCGCTGGCCCCAGACCCGCCAAGGATC...CAGGGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp GGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCAGGCAGGATGATCCTTaGCGGGTCTGGGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: GPFGVHTCPSMSAPGGCPRQDDP*RVWGQR
Trigger: CCGCTGGCCCCAGACCCGCCAAGGATCATCCTGCCT...GGGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp GGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCTCGGGTCCTGCAGGGCTaGGGGCAGGGCCTTGAGCAT +
Preference number: 4 (lower is better)
Translates to: GPSVFTPARPCQHQVAVPRVLQG*GQGLEH
Trigger: ATGCTCAAGGCCCTGCCCCCAGCCCTGCAGGACCCG...AGGGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000417060.5
CDS-3UTR TCA 90 bp CGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCTGTCCGGGTGGTTGCTaGGCACCGTTCGGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: RPRPQLYLRDGRGGSEAPCPGGC*APFGAA
Trigger: GGCGGCGCCGAACGGTGCTCAGCAACCACCCGGACA...GGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp CGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGTGTCCGGGTGGTTGCTaGGCACCGTTCGGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: RPQLYLRDGRGGSEAPRWCPGGC*APFGAA
Trigger: GGCGGCGCCGAACGGTGCTCAGCAACCACCCGGACA...CCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp ACCCGGAGCAAGGGATGCCCCCTGGAATGGCCCCGTGACCAGAAAGCGAGCCTGGAGGAGGCTGCAAGGTaGGCTTGCGTCAGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: TRSKGCPLEWPRDQKASLEEAAR*ACVSEE
Trigger: CTCCTCGCTGACGCAAGCTCACCTTGCAGCCTCCTC...CAGGCTCGCTTTCTGGTCACGGGGCCATTCCAGGGGGCATCCCTTGCTCCGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291691.12
CDS-3UTR TCA 90 bp CGGGTGGTGGCAGGGTCTCTCCCTGCTCCCTTCCATAGTCCCGCCACAGCCCACACTGGGAGGACAGGGTaGGGAGACTGCCTACCAAGG +
Preference number: 4 (lower is better)
Translates to: RVVAGSLPAPFHSPATAHTGRTG*GDCLPR
Trigger: CCTTGGTAGGCAGTCTCCTCACCCTGTCCTCCCAGT...GTGGGCTGTGGCGGGACTATGGAAGGGAGCAGGGAGAGACCCTGCCACCACCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR TCA 90 bp TGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCCCAGGGTTATGTGCATaGGGGTGGCCTCCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: CAGPFGVHTCPSMSAPGGPGLCA*GWPPGV
Trigger: GACTCCGGGAGGCCACCCTCATGCACATAACCCTGG...GCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR GCA 90 bp GCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCCAAGCACCGGTGTTaGCTGCAGGGCGGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: ASSCAGPFGVHTCPSMSAPKHRC*LQGGPY
Trigger: GTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGG...TGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp ACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGGCCGGCGCCGCCACCCCCTTCCACGTTCTaGCGTTCTTGCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TSVMEEGDLRLPGGPAPPPPSTF*RSCSSF
Trigger: GAAGCTGGAGCAAGAACGGCAGAACGTGGAAGGGGG...TGGCGGCGCCGGCCCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397682.7
CDS-3UTR GCA 90 bp GTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGACCCGAGGGCTCCTCTaGTTGGCCCGCTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: VTASSCAGPFGVHTCPSMTRGLL*LARSRP
Trigger: AGGCCTGGAGCGGGCCAAGCAGAGGAGCCCTCGGGT...CATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp CGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCACATGTGGCGGGTCCTaGAGGGCTGGGGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RPRPQLYLRDGRGGSEAPTCGGS*RAGGRA
Trigger: GGCCCTGCCCCCAGCCCTGCAGGACCCGCCACATGT...GGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp GCCTGCAGTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGGCCTCCCGGAGTCTCTaGAGAAGGTCCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: ACSPHSRSHSGWWQGLSLASRSL*RRSLLL
Trigger: GAGAAGGAGGGACCTTCTGCAGAGACTCCGGGAGGC...CAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGACTGCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp GCCTGCAGTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGCCTTCCAGGGTTATGTaGATGAGGGTGGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: ACSPHSRSHSGWWQGLSLPSRVM*MRVASR
Trigger: CCGGGAGGCCACCCTCATGCACATAACCCTGGAAGG...CAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGACTGCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp GTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGGGTAGGATGCCCGTaGGGGGCAGCTCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: VLLPVAALGPSVFTPARPWVGCP*GAALGA
Trigger: TGCCCCCAGAGCTGCCCCCCACGGGCATCCTACCCA...TGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp GTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCAGATCCTTGGCGGGTCTaGGGCCAGCGGGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: VLLPVAALGPSVFTPARPDPWRV*GQRGWG
Trigger: TCCCCATCCCCGCTGGCCCCAGACCCGCCAAGGATC...TGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp CGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGCCTCGGGGGCACATGTaGCGGGTCCTGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RPQLYLRDGRGGSEAPRWPRGHM*RVLQGW
Trigger: CCAGCCCTGCAGGACCCGCCACATGTGCCCCCGAGG...CCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp GTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTGGCCTGGCAGCTCGTaGGACCCTCGGGGGCACATG +
Preference number: 4 (lower is better)
Translates to: VTASSCAGPFGVHTCPSMWPGSS*DPRGHM
Trigger: CATGTGCCCCCGAGGGTCCCACGAGCTGCCAGGCCA...CATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000417060.5
CDS-3UTR CCA 90 bp GTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGCTCCCTTGGCCACACAGCATGGTaGTGGTGGTGGTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: VHTRVATPGGGRVSPCSLGHTAW*WWWWWC
Trigger: GCACCACCACCACCACCACCACCATGCTGTGTGGCC...AAGGGAGCAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp CGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGGGCCACACAGCATGGTaGTGGTGGTGGTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: RWALRCSHLPVHVSTRWLGHTAW*WWWWWC
Trigger: GCACCACCACCACCACCACCACCATGCTGTGTGGCC...CAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000417060.5
CDS-3UTR CCA 90 bp CGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGGGTGGCCACACAGCATaGTGGTGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RWALRCSHLPVHVSTRWLGGHTA*WWWWWW
Trigger: CCACCACCACCACCACCACCATGCTGTGTGGCCACC...CAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000417060.5
CDS-3UTR CCA 90 bp GGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCAGTGGCAGCCCCAGGTaGCCACACAGCATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GPFGVHTCPSMSAPGGCPSGSPR*PHSMVV
Trigger: CACCACCATGCTGTGTGGCCACCTGGGGCTGCCACT...GGGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000417060.5
CDS-3UTR CCA 90 bp GGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGAGCCCTGAGGAAGCCTaGGGGTGGAGGGTGCCCCGG +
Preference number: 4 (lower is better)
Translates to: GGVHGLNFTSVMEEGDLRSPEEA*GWRVPR
Trigger: CCGGGGCACCCTCCACCCCCAGGCTTCCTCAGGGCT...CCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp ACCCGGAGCAAGGGATGCCCCCTGGAATGGCCCCGTGACCAGAAAGCGAGCCTGGCAAGGGATGCCCCCTaGAATGGCCCCGTGACCAGA +
Preference number: 4 (lower is better)
Translates to: TRSKGCPLEWPRDQKASLARDAP*NGPVTR
Trigger: TCTGGTCACGGGGCCATTCCAGGGGGCATCCCTTGC...CAGGCTCGCTTTCTGGTCACGGGGCCATTCCAGGGGGCATCCCTTGCTCCGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp TCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTaGGCCGGCGCCGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: SGWWRPRPQLYLRDGRGGSEAPR*AGAATQ
Trigger: CTGAGTGGCGGCGCCGGCCCACCTGGGAGCCTCAGA...TCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397682.7
CDS-3UTR TCA 90 bp CGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCTGGAAGAGGGGGATCTaGGGCTCCCAGGTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: RPRPQLYLRDGRGGSEAPWKRGI*GSQVGR
Trigger: CCGGCCCACCTGGGAGCCTCAGATCCCCCTCTTCCA...GGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp GGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCTCGGGCAGGATGGCCATaGCTGGAAGACCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GPSVFTPARPCQHQVAVPRAGWP*LEDPSR
Trigger: CCTGGAAGGGTCTTCCAGTCATGGCCATCCTGCCCG...AGGGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR GCA 90 bp CACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCCCCCAAGCGGCGGGGCCTaGAGGTCCAGGCGGTTCGCG +
Preference number: 4 (lower is better)
Translates to: HPYFFSGSLCHSCGHRCPPSGGA*RSRRFA
Trigger: CGCGAACCGCCTGGACCTGCAGGCCCCGCCGCTTGG...GGGACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp ACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGGCCGGCGCCGCCAGTCAGTCGGGTCACTTaGTCTGCTGCTGATGAGTCC +
Preference number: 4 (lower is better)
Translates to: TSVMEEGDLRLPGGPAPPVSRVT*SAADES
Trigger: GGACTCATCAGCAGCAGAGCAAGTGACCCGACTGAC...TGGCGGCGCCGGCCCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397682.7
CDS-3UTR GCA 90 bp GCCTGCAGTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGCCCCCTTCCACGTTCTaGCGTTCTTGCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: ACSPHSRSHSGWWQGLSLPPSTF*RSCSSF
Trigger: GAAGCTGGAGCAAGAACGGCAGAACGTGGAAGGGGG...CAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGACTGCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp GCCTGCAGTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGTGCAGGACCAACTGGTaGACCTGTGCGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ACSPHSRSHSGWWQGLSLCRTNW*TCAFCS
Trigger: GCTGCAGAACGCACAGGTGCACCAGTTGGTCCTGCA...CAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGACTGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp GTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGCTCCCTTGCCTCCCGGAGTCTCTaGAGAAGGTCCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: VHTRVATPGGGRVSPCSLASRSL*RRSLLL
Trigger: GAGAAGGAGGGACCTTCTGCAGAGACTCCGGGAGGC...AAGGGAGCAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp ACCCGGAGCAAGGGATGCCCCCTGGAATGGCCCCGTGACCAGAAAGCGAGCCTGTTCCTGCAAGGCCGATaGAGAGCTGCTGCACACGGG +
Preference number: 4 (lower is better)
Translates to: TRSKGCPLEWPRDQKASLFLQGR*RAAAHG
Trigger: CCCGTGTGCAGCAGCTCTGCATCGGCCTTGCAGGAA...CAGGCTCGCTTTCTGGTCACGGGGCCATTCCAGGGGGCATCCCTTGCTCCGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp CATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGCCCGGCCCGCTGTCCTaGTGGACACAAAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: HQAGGVHGLNFTSVMEEGPGPLS*WTQSPG
Trigger: CCCTGGGCTTTGTGTCCACCAGGACAGCGGGCCGGG...CCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp GCCTGCAGTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGGCCCACCTCCCTCCCTaGTTCTGTTACTCGCAGGAA +
Preference number: 4 (lower is better)
Translates to: ACSPHSRSHSGWWQGLSLAHLPP*FCYSQE
Trigger: TTCCTGCGAGTAACAGAACCAGGGAGGGAGGTGGGC...CAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGACTGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp CTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCTGGGGTTTCCTGGCTCGAGGTaGAGGCCCTCAGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: LRCSHLPVHVSTRWLSLGFPGSR*RPSGPP
Trigger: AGGGGGACCTGAGGGCCTCCACCTCGAGCCAGGAAA...CCCCAGGGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp CTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCGGTCCTCATTTCCTaGCTCGAGGTGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: LGPSVFTPARPCQHQVAVPVLIS*LEVEAL
Trigger: GAGGGCCTCCACCTCGAGCCAGGAAATGAGGACCGG...GACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp CGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCTGGGTAGGATGCCCGTaGGGGGCAGCTCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: RPRPQLYLRDGRGGSEAPWVGCP*GAALGA
Trigger: TGCCCCCAGAGCTGCCCCCCACGGGCATCCTACCCA...GGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp CATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGTGGGTAGGATGCCCGTaGGGGGCAGCTCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: HQAGGVHGLNFTSVMEEGWVGCP*GAALGA
Trigger: TGCCCCCAGAGCTGCCCCCCACGGGCATCCTACCCA...CCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp GGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGGGGATGGGGAGGCAGTaGGTAGGATGCCCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GGVHGLNFTSVMEEGDLRGMGRQ*VGCPWG
Trigger: CCCCCACGGGCATCCTACCCACTGCCTCCCCATCCC...CCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp TCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGAGATCCTTGGCGGGTCTaGGGCCAGCGGGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: SGWWRPRPQLYLRDGRGGDPWRV*GQRGWG
Trigger: TCCCCATCCCCGCTGGCCCCAGACCCGCCAAGGATC...TCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp GGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGGTGGCCTGGCAGCTCGTaGGACCCTCGGGGGCACATG +
Preference number: 4 (lower is better)
Translates to: GLNFTSVMEEGDLRLPGGWPGSS*DPRGHM
Trigger: CATGTGCCCCCGAGGGTCCCACGAGCTGCCAGGCCA...CCCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp CGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGTGGCCTGGCAGCTCGTaGGACCCTCGGGGGCACATG +
Preference number: 4 (lower is better)
Translates to: RPQLYLRDGRGGSEAPRWWPGSS*DPRGHM
Trigger: CATGTGCCCCCGAGGGTCCCACGAGCTGCCAGGCCA...CCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACTGTCCGGGTGGTTGCTaGGCACCGTTCGGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHCPGGC*APFGAA
Trigger: GGCGGCGCCGAACGGTGCTCAGCAACCACCCGGACA...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACGGGTCCCGGCAAGGGTaGGGGAGCCCTTGCGGATCC +
Preference number: 4 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHGSRQG*GSPCGS
Trigger: GGATCCGCAAGGGCTCCCTCACCCTTGCCGGGACCC...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp CACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCCCTACGCGCGCGCCAGCTaGGAAAACGCCCACCCCGGC +
Preference number: 4 (lower is better)
Translates to: HPYFFSGSLCHSCGHRCPYARAS*ENAHPG
Trigger: GCCGGGGTGGGCGTTTTCTCAGCTGGCGCGCGCGTA...GGGACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR TCA 90 bp TCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGAGCTTCCACGGCTTCCTaGGGGAGGTTGCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: SGWWRPRPQLYLRDGRGGASTAS*GRLQGA
Trigger: GGCTCCCTGCAACCTCCCTCAGGAAGCCGTGGAAGC...TCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR TCA 90 bp CGGGTGGTGGCAGGGTCTCTCCCTGCTCCCTTCCATAGTCCCGCCACAGCCCACATACTTCCTGACCGTTaGGTAGGGAAGGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: RVVAGSLPAPFHSPATAHILPDR*VGKAWG
Trigger: TCCCCAGGCCTTCCCTACTCAACGGTCAGGAAGTAT...GTGGGCTGTGGCGGGACTATGGAAGGGAGCAGGGAGAGACCCTGCCACCACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR TCA 90 bp AGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCACTGGGGGCAGGGCCTTaGGCATCCAGTTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SSCAGPFGVHTCPSMSAPLGAGP*ASSSAG
Trigger: TCCTGCAGAACTGGATGCTCAAGGCCCTGCCCCCAG...TGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR TCA 90 bp GGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCCTGGAATGGCCCCGTaGCCAGAAAGCGAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: GGVHGLNFTSVMEEGDLRPGMAP*PESEPA
Trigger: GGCAGGCTCGCTTTCTGGTCACGGGGCCATTCCAGG...CCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR TCA 90 bp CGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGCCTGGAATGGCCCCGTaGCCAGAAAGCGAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RPQLYLRDGRGGSEAPRWPGMAP*PESEPA
Trigger: GGCAGGCTCGCTTTCTGGTCACGGGGCCATTCCAGG...CCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp GGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGAGCACCGGTGTTGCCTaGAGGGCGGGCCTTACCTCC +
Preference number: 4 (lower is better)
Translates to: GGVHGLNFTSVMEEGDLRSTGVA*RAGLTS
Trigger: GGAGGTAAGGCCCGCCCTGCAGGCAACACCGGTGCT...CCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp CGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCCCCAAGCACCGGTGTTaGCTGCAGGGCGGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: RPRPQLYLRDGRGGSEAPPKHRC*LQGGPY
Trigger: GTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGG...GGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp CGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGCCCAAGCACCGGTGTTaGCTGCAGGGCGGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: RPQLYLRDGRGGSEAPRWPKHRC*LQGGPY
Trigger: GTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGG...CCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp CGGGTGGTGGCAGGGTCTCTCCCTGCTCCCTTCCATAGTCCCGCCACAGCCCACCTCGCAGGAAAGAACTaGTCAGCAGGAGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: RVVAGSLPAPFHSPATAHLAGKN*SAGAQA
Trigger: TGCTTGGGCTCCTGCTGAGCAGTTCTTTCCTGCGAG...GTGGGCTGTGGCGGGACTATGGAAGGGAGCAGGGAGAGACCCTGCCACCACCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp GTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGCTCTTCAGAGCAGTCTaGAGGGCATCGTCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: VTASSCAGPFGVHTCPSMLFRAV*RASSGR
Trigger: CCGGCCGGACGATGCCCTGCAGACTGCTCTGAAGAG...CATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp ACCCGGAGCAAGGGATGCCCCCTGGAATGGCCCCGTGACCAGAAAGCGAGCCTGCAACTGGTGCACCTGTaGGTTCTGCAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TRSKGCPLEWPRDQKASLQLVHL*VLQQQQ
Trigger: CTGCTGCTGCTGCAGAACGCACAGGTGCACCAGTTG...CAGGCTCGCTTTCTGGTCACGGGGCCATTCCAGGGGGCATCCCTTGCTCCGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp CGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGCAACTGGTGCACCTGTaGGTTCTGCAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RWALRCSHLPVHVSTRWLQLVHL*VLQQQQ
Trigger: CTGCTGCTGCTGCAGAACGCACAGGTGCACCAGTTG...CAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp ACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCAGAGCTCAACATGTGGCGGGTCCTaGAGGGCTGGGGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TGACSVVQAIVQWFHQSSTCGGS*RAGGRA
Trigger: GGCCCTGCCCCCAGCCCTGCAGGACCCGCCACATGT...TGAGCTCTGATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp GGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGGTCACAGGCCCCTCACTaGAGGGGACCCGGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: GLNFTSVMEEGDLRLPGGSQAPH*RGPGAR
Trigger: CCTTGCTCCGGGTCCCCTGCAGTGAGGGGCCTGTGA...CCCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp CGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGCCTGGGAGGGGCTGTTaGCCTGGTGGGGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: RPQLYLRDGRGGSEAPRWPGRGC*PGGVHR
Trigger: CCTGTGAACCCCACCAGGGCAACAGCCCCTCCCAGG...CCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp GCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCTGGCCTCCCGGAGTCTCTaGAGAAGGTCCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: ALRCSHLPVHVSTRWLSLASRSL*RRSLLL
Trigger: GAGAAGGAGGGACCTTCTGCAGAGACTCCGGGAGGC...CAGGGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR GCA 90 bp CGGGTGGTGGCAGGGTCTCTCCCTGCTCCCTTCCATAGTCCCGCCACAGCCCACAGGAGGTGTTGTTCCTaGAAGGCCGATGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: RVVAGSLPAPFHSPATAHRRCCS*KADAEL
Trigger: CAGCTCTGCATCGGCCTTGCAGGAACAACACCTCCT...GTGGGCTGTGGCGGGACTATGGAAGGGAGCAGGGAGAGACCCTGCCACCACCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp CCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCTGGCCGAGATCGCTCCATTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: PFGVHTCPSMSAPGGCPWPRSLH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAATGGAGCGATCTCGG...CCAGGGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491666.5
CDS-3UTR CCA 90 bp TGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCGCCCACCTCCCTCCCTaGTTCTGTTACTCGCAGGAA +
Preference number: 4 (lower is better)
Translates to: CAGPFGVHTCPSMSAPGGAHLPP*FCYSQE
Trigger: TTCCTGCGAGTAACAGAACCAGGGAGGGAGGTGGGC...GCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACGAGGGCTCCTCTGCTTaGCCCGCTCCAGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHEGSSA*PAPGLG
Trigger: GCCCAGGCCTGGAGCGGGCCAAGCAGAGGAGCCCTC...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp CATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGAAAGGAGGGGTCCCTaGGAGGGGCTGTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: HQAGGVHGLNFTSVMEEGERRGP*EGLLPW
Trigger: CCAGGGCAACAGCCCCTCCCAGGGACCCCTCCTTTC...CCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp ACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCAGAGCTCATCTGAGGCTCCCAGGTaGGCCGGCGCCGCCCTACAG +
Preference number: 4 (lower is better)
Translates to: TGACSVVQAIVQWFHQSSSEAPR*AGAALQ
Trigger: CTGTAGGGCGGCGCCGGCCCACCTGGGAGCCTCAGA...TGAGCTCTGATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp GTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCACCAGGTGGCTGTCCCTaGGGAGCTCTGCAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: VLLPVAALGPSVFTPARPPGGCP*GALQLS
Trigger: ACTGAGCTGCAGAGCTCCCCAGGGACAGCCACCTGG...TGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR TCA 90 bp CCATGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGGGTCCCGGCAAGGGTaGGGGAGCCCTTGCGGATCC +
Preference number: 4 (lower is better)
Translates to: PCTPTSLVGVCATAVDTGGSRQG*GSPCGS
Trigger: GGATCCGCAAGGGCTCCCTCACCCTTGCCGGGACCC...ACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp GGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGGCCGCTGAGCTCAAGCTaGGGGACGACGACCTCATGC +
Preference number: 4 (lower is better)
Translates to: GLNFTSVMEEGDLRLPGGPLSSS*GTTTSC
Trigger: GCATGAGGTCGTCGTCCCTCAGCTTGAGCTCAGCGG...CCCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp TGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCGAGGAATCTGTGCTATaGGTGGCTGCTGAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: CAGPFGVHTCPSMSAPGGEESVL*VAAEGA
Trigger: AGCTCCCTCAGCAGCCACTCATAGCACAGATTCCTC...GCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR TCA 90 bp CGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGCTGGGGGCAGGGCCTTaGGCATCCAGTTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: RPQLYLRDGRGGSEAPRWLGAGP*ASSSAG
Trigger: TCCTGCAGAACTGGATGCTCAAGGCCCTGCCCCCAG...CCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACTGGAAGAGGGGGATCTaGGGCTCCCAGGTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHWKRGI*GSQVGR
Trigger: CCGGCCCACCTGGGAGCCTCAGATCCCCCTCTTCCA...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp GGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCCAGGGTTATGTGCATaGGGGTGGCCTCCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: GGVHGLNFTSVMEEGDLRPGLCA*GWPPGV
Trigger: GACTCCGGGAGGCCACCCTCATGCACATAACCCTGG...CCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp TCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGACCAGGGTTATGTGCATaGGGGTGGCCTCCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: SGWWRPRPQLYLRDGRGGPGLCA*GWPPGV
Trigger: GACTCCGGGAGGCCACCCTCATGCACATAACCCTGG...TCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp CATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGCGGGCAGGATGGCCATaGCTGGAAGACCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: HQAGGVHGLNFTSVMEEGRAGWP*LEDPSR
Trigger: CCTGGAAGGGTCTTCCAGTCATGGCCATCCTGCCCG...CCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp GGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTTCCTGAGGGAGGTTaGAGGGAGCCGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: GGVHGLNFTSVMEEGDLRLPEGG*REPRSR
Trigger: GCGCGATCTCGGCTCCCTGCAACCTCCCTCAGGAAG...CCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR GCA 90 bp CGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGCTCGCAGGAAAGAACTaGTCAGCAGGAGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: RWALRCSHLPVHVSTRWLLAGKN*SAGAQA
Trigger: TGCTTGGGCTCCTGCTGAGCAGTTCTTTCCTGCGAG...CAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp CCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCTGGCCCCCTTCCACGTTCTaGCGTTCTTGCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PFGVHTCPSMSAPGGCPWPPSTF*RSCSSF
Trigger: GAAGCTGGAGCAAGAACGGCAGAACGTGGAAGGGGG...CCAGGGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp CATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGCTCTTCAGAGCAGTCTaGAGGGCATCGTCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: HQAGGVHGLNFTSVMEEGLFRAV*RASSGR
Trigger: CCGGCCGGACGATGCCCTGCAGACTGCTCTGAAGAG...CCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp GGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCTGTTCCCGGAGTCTCTaGAGAAGGTCCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: GPFGVHTCPSMSAPGGCPCSRSL*RRSLLL
Trigger: GAGAAGGAGGGACCTTCTGCAGAGACTCCGGGAACA...GGGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp TGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCAACTGGTGCACCTGTaGGTTCTGCAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: WALRCSHLPVHVSTRWLSQLVHL*VLQQQQ
Trigger: CTGCTGCTGCTGCAGAACGCACAGGTGCACCAGTTG...GGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp GCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCTGTGCAGGACCAACTGGTaGACCTGTGCGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ALRCSHLPVHVSTRWLSLCRTNW*TCAFCS
Trigger: GCTGCAGAACGCACAGGTGCACCAGTTGGTCCTGCA...CAGGGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp CTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCTGGGGTGCAGGACCAACTGGTaGACCTGTGCGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LRCSHLPVHVSTRWLSLGCRTNW*TCAFCS
Trigger: GCTGCAGAACGCACAGGTGCACCAGTTGGTCCTGCA...CCCCAGGGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp CTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCTGCAGGACCAACTGGTaGACCTGTGCGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LGPSVFTPARPCQHQVAVCRTNW*TCAFCS
Trigger: GCTGCAGAACGCACAGGTGCACCAGTTGGTCCTGCA...GACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp GTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGCTCCCTTGCAGGGAGTCAAGTTTaGAGGAAGCTTCGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: VHTRVATPGGGRVSPCSLAGSQV*RKLRRG
Trigger: CCCTCTGCGAAGCTTCCTGCAAACTTGACTCCCTGC...AAGGGAGCAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR GCA 90 bp GGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCAGGACCAGAGGGGGTaGCCAGGGGATATGTCCCAC +
Preference number: 4 (lower is better)
Translates to: GGVHGLNFTSVMEEGDLRQDQRG*PGDMSH
Trigger: GTGGGACATATCCCCTGGGCACCCCCTCTGGTCCTG...CCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR GCA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACCCGATGCAGAGCTGCTaGACACGGGGACGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHPMQSC*TRGRGA
Trigger: GGCTCCCCGTCCCCGTGTGCAGCAGCTCTGCATCGG...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp CACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCCCCCGATGCAGAGCTGCTaGACACGGGGACGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: HPYFFSGSLCHSCGHRCPPMQSC*TRGRGA
Trigger: GGCTCCCCGTCCCCGTGTGCAGCAGCTCTGCATCGG...GGGACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp ACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCAGAGCTCACCGATGCAGAGCTGCTaGACACGGGGACGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: TGACSVVQAIVQWFHQSSPMQSC*TRGRGA
Trigger: GGCTCCCCGTCCCCGTGTGCAGCAGCTCTGCATCGG...TGAGCTCTGATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp GTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGCTCCCTTAGGAGGTGTTGTTCCTaGAAGGCCGATGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: VHTRVATPGGGRVSPCSLRRCCS*KADAEL
Trigger: CAGCTCTGCATCGGCCTTGCAGGAACAACACCTCCT...AAGGGAGCAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp GGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGACGTCAGTTTCCCCCTaGGACCACGAACCCACGGCC +
Preference number: 4 (lower is better)
Translates to: GGVHGLNFTSVMEEGDLRTSVSP*DHEPTA
Trigger: GGCCGTGGGTTCGTGGTCCCAGGGGGAAACTGACGT...CCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp GGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGGACGTCAGTTTCCCCCTaGGACCACGAACCCACGGCC +
Preference number: 4 (lower is better)
Translates to: GLNFTSVMEEGDLRLPGGTSVSP*DHEPTA
Trigger: GGCCGTGGGTTCGTGGTCCCAGGGGGAAACTGACGT...CCCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp CTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCGCCCACCTCCCTCCCTaGTTCTGTTACTCGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LGPSVFTPARPCQHQVAVAHLPP*FCYSQE
Trigger: TTCCTGCGAGTAACAGAACCAGGGAGGGAGGTGGGC...GACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp TGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCATGAGTCCAGCATGGTaGGAGCTGCAGGAGACGACT +
Preference number: 4 (lower is better)
Translates to: CAGPFGVHTCPSMSAPGGMSPAW*ELQETT
Trigger: AGTCGTCTCCTGCAGCTCCCACCATGCTGGACTCAT...GCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp CGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCTTTCCTGGCTCGAGGTaGAGGCCCTCAGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: RPRPQLYLRDGRGGSEAPFPGSR*RPSGPP
Trigger: AGGGGGACCTGAGGGCCTCCACCTCGAGCCAGGAAA...GGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp CGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGTTTCCTGGCTCGAGGTaGAGGCCCTCAGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: RPQLYLRDGRGGSEAPRWFPGSR*RPSGPP
Trigger: AGGGGGACCTGAGGGCCTCCACCTCGAGCCAGGAAA...CCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp ACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCAGAGCTCAGGGATGGGGAGGCAGTaGGTAGGATGCCCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: TGACSVVQAIVQWFHQSSGMGRQ*VGCPWG
Trigger: CCCCCACGGGCATCCTACCCACTGCCTCCCCATCCC...TGAGCTCTGATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp AGAGAAGTGAGTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCGGGATGGGGAGGCAGTaGGTAGGATGCCCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: REVSVTASSCAGPFGVHTGMGRQ*VGCPWG
Trigger: CCCCCACGGGCATCCTACCCACTGCCTCCCCATCCC...GGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACACTCACTTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp ACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCAGAGCTCAGATCCTTGGCGGGTCTaGGGCCAGCGGGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: TGACSVVQAIVQWFHQSSDPWRV*GQRGWG
Trigger: TCCCCATCCCCGCTGGCCCCAGACCCGCCAAGGATC...TGAGCTCTGATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACCGGGTCCTGCAGGGCTaGGGGCAGGGCCTTGAGCAT +
Preference number: 4 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHRVLQG*GQGLEH
Trigger: ATGCTCAAGGCCCTGCCCCCAGCCCTGCAGGACCCG...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp CATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGGCCACACAGCATGGTaGTGGTGGTGGTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: HQAGGVHGLNFTSVMEEGGHTAW*WWWWWC
Trigger: GCACCACCACCACCACCACCACCATGCTGTGTGGCC...CCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp GGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGGGTGGCCACACAGCATaGTGGTGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GGVHGLNFTSVMEEGDLRGGHTA*WWWWWW
Trigger: CCACCACCACCACCACCACCATGCTGTGTGGCCACC...CCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp GGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGGAGTGGCAGCCCCAGGTaGCCACACAGCATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GLNFTSVMEEGDLRLPGGSGSPR*PHSMVV
Trigger: CACCACCATGCTGTGTGGCCACCTGGGGCTGCCACT...CCCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp AGAGAAGTGAGTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCCGGGCTGGAGGACAGTaGCAGCCCCAGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: REVSVTASSCAGPFGVHTRAGGQ*QPQVAT
Trigger: TGTGGCCACCTGGGGCTGCCACTGTCCTCCAGCCCG...GGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACACTCACTTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000417060.5
CDS-3UTR CCA 90 bp CCATGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTAGCCCTGAGGAAGCCTaGGGGTGGAGGGTGCCCCGG +
Preference number: 4 (lower is better)
Translates to: PCTPTSLVGVCATAVDTGSPEEA*GWRVPR
Trigger: CCGGGGCACCCTCCACCCCCAGGCTTCCTCAGGGCT...ACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp CATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGGATGCCCCCTGGAATaGCCCCGTGACCAGAAAGCG +
Preference number: 4 (lower is better)
Translates to: HQAGGVHGLNFTSVMEEGGCPLE*PRDQKA
Trigger: CGCTTTCTGGTCACGGGGCCATTCCAGGGGGCATCC...CCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp CGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGGGATGCCCCCTGGAATaGCCCCGTGACCAGAAAGCG +
Preference number: 4 (lower is better)
Translates to: RPQLYLRDGRGGSEAPRWGCPLE*PRDQKA
Trigger: CGCTTTCTGGTCACGGGGCCATTCCAGGGGGCATCC...CCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp GTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCACATGTCAGCACCAGGTaGCTGTCCCTGGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: VLLPVAALGPSVFTPARPHVSTR*LSLGSS
Trigger: AGAGCTCCCCAGGGACAGCCACCTGGTGCTGACATG...TGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp AGTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCCTGCAAAACTCAGGGTaGGCCAGGCGTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: SVTASSCAGPFGVHTCPSLQNSG*ARRPQA
Trigger: AGCCTGTGGACGCCTGGCCCACCCTGAGTTTTGCAG...GGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417060.5
CDS-3UTR TCA 90 bp ACCCGGAGCAAGGGATGCCCCCTGGAATGGCCCCGTGACCAGAAAGCGAGCCTGAAGCTTATGTTCCGCTaGGCTCAAGCTGAGGGACGA +
Preference number: 4 (lower is better)
Translates to: TRSKGCPLEWPRDQKASLKLMFR*AQAEGR
Trigger: TCGTCCCTCAGCTTGAGCTCAGCGGAACATAAGCTT...CAGGCTCGCTTTCTGGTCACGGGGCCATTCCAGGGGGCATCCCTTGCTCCGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397680.5
CDS-3UTR TCA 90 bp ACCCGGAGCAAGGGATGCCCCCTGGAATGGCCCCGTGACCAGAAAGCGAGCCTGTTAAGTTGCAGTTGCTaGGGAGGCTGCAAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: TRSKGCPLEWPRDQKASLLSCSC*GGCKVS
Trigger: GCTCACCTTGCAGCCTCCTCAGCAACTGCAACTTAA...CAGGCTCGCTTTCTGGTCACGGGGCCATTCCAGGGGGCATCCCTTGCTCCGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291691.12
CDS-3UTR TCA 90 bp TGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCGAGGAATCTGTGCTATaGGTGGCTGCTGAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: WALRCSHLPVHVSTRWLSEESVL*VAAEGA
Trigger: AGCTCCCTCAGCAGCCACTCATAGCACAGATTCCTC...GGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp CACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCCCACAGGTCACAGGCGGTaGGGACCCCGGGACTGTGTC +
Preference number: 4 (lower is better)
Translates to: HPYFFSGSLCHSCGHRCPTGHRR*GPRDCV
Trigger: GACACAGTCCCGGGGTCCGCACCGCCTGTGACCTGT...GGGACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp CTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCGTCAGTCGGGTCACTTaGTCTGCTGCTGATGAGTCC +
Preference number: 4 (lower is better)
Translates to: LGPSVFTPARPCQHQVAVVSRVT*SAADES
Trigger: GGACTCATCAGCAGCAGAGCAAGTGACCCGACTGAC...GACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp GCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCTGGGGAGGAGGAATCTGTaGTATGAGTGGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: ALRCSHLPVHVSTRWLSLGRRNL*YEWLLR
Trigger: CCTCAGCAGCCACTCATAGCACAGATTCCTCCTCCC...CAGGGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp GTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGCAACTGGTGCACCTGTaGGTTCTGCAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VTASSCAGPFGVHTCPSMQLVHL*VLQQQQ
Trigger: CTGCTGCTGCTGCAGAACGCACAGGTGCACCAGTTG...CATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp CGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGACCAGAAAGCGAGCCTaGCCAGCTTCCCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RPQLYLRDGRGGSEAPRWTRKRA*PASPGG
Trigger: TCCTCCTGGGGAAGCTGGGCAGGCTCGCTTTCTGGT...CCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp GGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGGACCAGAAAGCGAGCCTaGCCAGCTTCCCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GLNFTSVMEEGDLRLPGGTRKRA*PASPGG
Trigger: TCCTCCTGGGGAAGCTGGGCAGGCTCGCTTTCTGGT...CCCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp CATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGAGGGAGGCCCCAGGTTaGCAGGTTTCCACTGTGCGT +
Preference number: 4 (lower is better)
Translates to: HQAGGVHGLNFTSVMEEGREAPG*QVSTVR
Trigger: ACGCACAGTGGAAACCTGGCAACCTGGGGCCTCCCT...CCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR GCA 90 bp GGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCTTTCGGTGTTCACACCTaGCCGTCCATGTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: GPSVFTPARPCQHQVAVPFGVHT*PSMSAP
Trigger: TGGTGCTGACATGGACGGGCAGGTGTGAACACCGAA...AGGGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp TGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCATCCTGTCTCCTACCTaGAAAACTCAGGGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: CAGPFGVHTCPSMSAPGGILSPT*KTQGGP
Trigger: TGGCCCACCCTGAGTTTTGCAGGTAGGAGACAGGAT...GCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417060.5
CDS-3UTR CCA 90 bp ACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCAGAGCTCACTGGCCCTGTCCGGGTaGTTGCTGAGCACCGTTCGG +
Preference number: 4 (lower is better)
Translates to: TGACSVVQAIVQWFHQSSLALSG*LLSTVR
Trigger: CCGAACGGTGCTCAGCAACCACCCGGACAGGGCCAG...TGAGCTCTGATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp CCATGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGATCCTTGGCGGGTCTaGGGCCAGCGGGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: PCTPTSLVGVCATAVDTGDPWRV*GQRGWG
Trigger: TCCCCATCCCCGCTGGCCCCAGACCCGCCAAGGATC...ACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACAGGCAGGATGATCCTTaGCGGGTCTGGGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHRQDDP*RVWGQR
Trigger: CCGCTGGCCCCAGACCCGCCAAGGATCATCCTGCCT...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp GTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGCTCCCTTAATCTGTGCTATGAGTaGCTGCTGAGGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VHTRVATPGGGRVSPCSLNLCYE*LLRELL
Trigger: CAGCAGCTCCCTCAGCAGCCACTCATAGCACAGATT...AAGGGAGCAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp CCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCTGGTTCTGCAGGACCAACTaGTGCACCTGTGCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PFGVHTCPSMSAPGGCPWFCRTN*CTCAFC
Trigger: GCAGAACGCACAGGTGCACCAGTTGGTCCTGCAGAA...CCAGGGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp TGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCCGGGTCCTGCAGGGCTaGGGGCAGGGCCTTGAGCAT +
Preference number: 4 (lower is better)
Translates to: CTPTSLVGVCATAVDTGVRVLQG*GQGLEH
Trigger: ATGCTCAAGGCCCTGCCCCCAGCCCTGCAGGACCCG...GACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp TGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCTGGCCTGGCAGCTCGTaGGACCCTCGGGGGCACATG +
Preference number: 4 (lower is better)
Translates to: CTPTSLVGVCATAVDTGVWPGSS*DPRGHM
Trigger: CATGTGCCCCCGAGGGTCCCACGAGCTGCCAGGCCA...GACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACGAAAGGAGGGGTCCCTaGGAGGGGCTGTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHERRGP*EGLLPW
Trigger: CCAGGGCAACAGCCCCTCCCAGGGACCCCTCCTTTC...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp GTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGCTCCCTTATTTCATCAGGCTGGTaGCGTCCACGGCCTCAACTT +
Preference number: 4 (lower is better)
Translates to: VHTRVATPGGGRVSPCSLISSGW*RPRPQL
Trigger: AAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAAT...AAGGGAGCAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp CGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCGACCTGCAGAGGGGCTaGGCTTTAGCAGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: RPRPQLYLRDGRGGSEAPDLQRG*ALAGPE
Trigger: CTCTGGTCCTGCTAAAGCCCAGCCCCTCTGCAGGTC...GGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR CCA 90 bp ACCCGGAGCAAGGGATGCCCCCTGGAATGGCCCCGTGACCAGAAAGCGAGCCTGCAGGATGGCCATGACTaGAAGACCCTTCCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: TRSKGCPLEWPRDQKASLQDGHD*KTLPGL
Trigger: TAACCCTGGAAGGGTCTTCCAGTCATGGCCATCCTG...CAGGCTCGCTTTCTGGTCACGGGGCCATTCCAGGGGGCATCCCTTGCTCCGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp TGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCAGGCTCAGGCCAGCCTaGGCCAGGTACAGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: CTPTSLVGVCATAVDTGVRLRPA*ARYRRL
Trigger: GAGGCGCCTGTACCTGGCCCAGGCTGGCCTGAGCCT...GACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp GAAGTGAGTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCAGGTGGCTGTCCCTaGGGAGCTCTGCAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: EVSVTASSCAGPFGVHTCPGGCP*GALQLS
Trigger: ACTGAGCTGCAGAGCTCCCCAGGGACAGCCACCTGG...GCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACACTCACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR TCA 90 bp GGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCGAACCTTTTGCAAGTaGAGGCGCACGAACAGGCCC +
Preference number: 4 (lower is better)
Translates to: GGVHGLNFTSVMEEGDLRRTFCK*RRTNRP
Trigger: GGGCCTGTTCGTGCGCCTTCACTTGCAAAAGGTTCG...CCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR TCA 90 bp CGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCCGAACCTTTTGCAAGTaGAGGCGCACGAACAGGCCC +
Preference number: 4 (lower is better)
Translates to: RPRPQLYLRDGRGGSEAPRTFCK*RRTNRP
Trigger: GGGCCTGTTCGTGCGCCTTCACTTGCAAAAGGTTCG...GGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR TCA 90 bp CACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCCCGAGGAGGCTGCAAGGTaGGCTTGCGTCAGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: HPYFFSGSLCHSCGHRCPEEAAR*ACVSEE
Trigger: CTCCTCGCTGACGCAAGCTCACCTTGCAGCCTCCTC...GGGACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR TCA 90 bp AGTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATACTTCCTGACCGTTaGGTAGGGAAGGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SVTASSCAGPFGVHTCPSILPDR*VGKAWG
Trigger: TCCCCAGGCCTTCCCTACTCAACGGTCAGGAAGTAT...GGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR TCA 90 bp CACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCCCCTGGGGGCAGGGCCTTaGGCATCCAGTTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: HPYFFSGSLCHSCGHRCPLGAGP*ASSSAG
Trigger: TCCTGCAGAACTGGATGCTCAAGGCCCTGCCCCCAG...GGGACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp ACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCAGAGCTCACTGGGGGCAGGGCCTTaGGCATCCAGTTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: TGACSVVQAIVQWFHQSSLGAGP*ASSSAG
Trigger: TCCTGCAGAACTGGATGCTCAAGGCCCTGCCCCCAG...TGAGCTCTGATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp CACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCCCCTTCCTGAGGGAGGTTaGAGGGAGCCGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: HPYFFSGSLCHSCGHRCPLPEGG*REPRSR
Trigger: GCGCGATCTCGGCTCCCTGCAACCTCCCTCAGGAAG...GGGACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR GCA 90 bp GGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGGCCCCCTTCCACGTTCTaGCGTTCTTGCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GLNFTSVMEEGDLRLPGGPPSTF*RSCSSF
Trigger: GAAGCTGGAGCAAGAACGGCAGAACGTGGAAGGGGG...CCCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp AGAGAAGTGAGTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCCTCTTCAGAGCAGTCTaGAGGGCATCGTCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: REVSVTASSCAGPFGVHTLFRAV*RASSGR
Trigger: CCGGCCGGACGATGCCCTGCAGACTGCTCTGAAGAG...GGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACACTCACTTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp GTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTGTTCCCGGAGTCTCTaGAGAAGGTCCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: VTASSCAGPFGVHTCPSMCSRSL*RRSLLL
Trigger: GAGAAGGAGGGACCTTCTGCAGAGACTCCGGGAACA...CATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp GGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGGCAACTGGTGCACCTGTaGGTTCTGCAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GLNFTSVMEEGDLRLPGGQLVHL*VLQQQQ
Trigger: CTGCTGCTGCTGCAGAACGCACAGGTGCACCAGTTG...CCCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp GGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGTGCAGGACCAACTGGTaGACCTGTGCGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GGVHGLNFTSVMEEGDLRCRTNW*TCAFCS
Trigger: GCTGCAGAACGCACAGGTGCACCAGTTGGTCCTGCA...CCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp TTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAACATGTGGCGGGTCCTaGAGGGCTGGGGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LFHQAGGVHGLNFTSVMETCGGS*RAGGRA
Trigger: GGCCCTGCCCCCAGCCCTGCAGGACCCGCCACATGT...TTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp GCCTGCAGTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGAACAGGAGCGTGGTCTaGACTTGGTTGGGCATTAAA +
Preference number: 4 (lower is better)
Translates to: ACSPHSRSHSGWWQGLSLNRSVV*TWLGIK
Trigger: TTTAATGCCCAACCAAGTGCAGACCACGCTCCTGTT...CAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGACTGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR GCA 90 bp TGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCAGGCCGATGCAGAGCTaGTGCACACGGGGACGGGGA +
Preference number: 4 (lower is better)
Translates to: CTPTSLVGVCATAVDTGVRPMQS*CTRGRG
Trigger: TCCCCGTCCCCGTGTGCAGCAGCTCTGCATCGGCCT...GACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp TGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCCTGGCCCTGTCCGGGTaGTTGCTGAGCACCGTTCGG +
Preference number: 4 (lower is better)
Translates to: CTPTSLVGVCATAVDTGVLALSG*LLSTVR
Trigger: CCGAACGGTGCTCAGCAACCACCCGGACAGGGCCAG...GACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp AGTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGAGTCCAGCATGGTaGGAGCTGCAGGAGACGACT +
Preference number: 4 (lower is better)
Translates to: SVTASSCAGPFGVHTCPSMSPAW*ELQETT
Trigger: AGTCGTCTCCTGCAGCTCCCACCATGCTGGACTCAT...GGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACTTTCCTGGCTCGAGGTaGAGGCCCTCAGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHFPGSR*RPSGPP
Trigger: AGGGGGACCTGAGGGCCTCCACCTCGAGCCAGGAAA...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp ACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCAGAGCTCATTTCCTGGCTCGAGGTaGAGGCCCTCAGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: TGACSVVQAIVQWFHQSSFPGSR*RPSGPP
Trigger: AGGGGGACCTGAGGGCCTCCACCTCGAGCCAGGAAA...TGAGCTCTGATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp CACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCCCCCGGTCCTCATTTCCTaGCTCGAGGTGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: HPYFFSGSLCHSCGHRCPPVLIS*LEVEAL
Trigger: GAGGGCCTCCACCTCGAGCCAGGAAATGAGGACCGG...GGGACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp ACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCAGAGCTCACCGGTCCTCATTTCCTaGCTCGAGGTGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: TGACSVVQAIVQWFHQSSPVLIS*LEVEAL
Trigger: GAGGGCCTCCACCTCGAGCCAGGAAATGAGGACCGG...TGAGCTCTGATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp GTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTTCTGCAGGACCAACTaGTGCACCTGTGCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: VTASSCAGPFGVHTCPSMFCRTN*CTCAFC
Trigger: GCAGAACGCACAGGTGCACCAGTTGGTCCTGCAGAA...CATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp CCATGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGAAAGGAGGGGTCCCTaGGAGGGGCTGTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PCTPTSLVGVCATAVDTGERRGP*EGLLPW
Trigger: CCAGGGCAACAGCCCCTCCCAGGGACCCCTCCTTTC...ACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp CATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGAGGCAGACTGACATGTaGGGGATGTCAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: HQAGGVHGLNFTSVMEEGRQTDM*GMSAAG
Trigger: CCCTGCTGCTGACATCCCCCACATGTCAGTCTGCCT...CCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR CCA 90 bp CCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCTGGAGCTCTGCAGCTCAGTaGCAACTCTCTGGTCATCCT +
Preference number: 4 (lower is better)
Translates to: PFGVHTCPSMSAPGGCPWSSAAQ*QLSGHP
Trigger: AGGATGACCAGAGAGTTGCCACTGAGCTGCAGAGCT...CCAGGGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR TCA 90 bp TGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCCCCTTGCGGATCCCCTaGGATCCACCTCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: CTPTSLVGVCATAVDTGVPLRIP*DPPQQP
Trigger: AGGCTGCTGAGGTGGATCTCAGGGGATCCGCAAGGG...GACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp GAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGGGTCCCGGCAAGGGTaGGGGAGCCCTTGCGGATCC +
Preference number: 4 (lower is better)
Translates to: EIFISSGWWRPRPQLYLRGSRQG*GSPCGS
Trigger: GGATCCGCAAGGGCTCCCTCACCCTTGCCGGGACCC...ACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp CGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCGAGGAATCTGTGCTATaGGTGGCTGCTGAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RPRPQLYLRDGRGGSEAPEESVL*VAAEGA
Trigger: AGCTCCCTCAGCAGCCACTCATAGCACAGATTCCTC...GGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp GGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGGAGGAATCTGTGCTATaGGTGGCTGCTGAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GGVHGLNFTSVMEEGDLREESVL*VAAEGA
Trigger: AGCTCCCTCAGCAGCCACTCATAGCACAGATTCCTC...CCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp CGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGGAGGAATCTGTGCTATaGGTGGCTGCTGAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RPQLYLRDGRGGSEAPRWEESVL*VAAEGA
Trigger: AGCTCCCTCAGCAGCCACTCATAGCACAGATTCCTC...CCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp CGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCATACTTCCTGACCGTTaGGTAGGGAAGGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: RPRPQLYLRDGRGGSEAPILPDR*VGKAWG
Trigger: TCCCCAGGCCTTCCCTACTCAACGGTCAGGAAGTAT...GGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp GGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGATACTTCCTGACCGTTaGGTAGGGAAGGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GGVHGLNFTSVMEEGDLRILPDR*VGKAWG
Trigger: TCCCCAGGCCTTCCCTACTCAACGGTCAGGAAGTAT...CCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp CCATGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTCGGGCAGGATGGCCATaGCTGGAAGACCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PCTPTSLVGVCATAVDTGRAGWP*LEDPSR
Trigger: CCTGGAAGGGTCTTCCAGTCATGGCCATCCTGCCCG...ACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp CGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGGCGGAACTTCAGGAATaGAAGAATCTGTCACTCAGG +
Preference number: 4 (lower is better)
Translates to: RWALRCSHLPVHVSTRWLAELQE*KNLSLR
Trigger: CCTGAGTGACAGATTCTTTCATTCCTGAAGTTCCGC...CAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR GCA 90 bp TTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAACCCGAGGGCTCCTCTaGTTGGCCCGCTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LFHQAGGVHGLNFTSVMETRGLL*LARSRP
Trigger: AGGCCTGGAGCGGGCCAAGCAGAGGAGCCCTCGGGT...TTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp TCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGAGGGAGGAGGAATCTGTaGTATGAGTGGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SGWWRPRPQLYLRDGRGGGRRNL*YEWLLR
Trigger: CCTCAGCAGCCACTCATAGCACAGATTCCTCCTCCC...TCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp TGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCTCCCCAGGAGGAGCCTaGAGTCCACACTCGCGTAGC +
Preference number: 4 (lower is better)
Translates to: CTPTSLVGVCATAVDTGVSPGGA*SPHSRS
Trigger: GCTACGCGAGTGTGGACTGCAGGCTCCTCCTGGGGA...GACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp CGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCGCCCCACCTGTGTACTaGCTCCAGGGTGTTAATACC +
Preference number: 4 (lower is better)
Translates to: RPRPQLYLRDGRGGSEAPAPPVY*LQGVNT
Trigger: GGTATTAACACCCTGGAGGCAGTACACAGGTGGGGC...GGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR GCA 90 bp ACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCAGAGCTCACCTTCCAGGGTTATGTaGATGAGGGTGGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: TGACSVVQAIVQWFHQSSPSRVM*MRVASR
Trigger: CCGGGAGGCCACCCTCATGCACATAACCCTGGAAGG...TGAGCTCTGATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACTTCCTGCAAGGCCGATaGAGAGCTGCTGCACACGGG +
Preference number: 4 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHFLQGR*RAAAHG
Trigger: CCCGTGTGCAGCAGCTCTGCATCGGCCTTGCAGGAA...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp CCATGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTACGTCAGTTTCCCCCTaGGACCACGAACCCACGGCC +
Preference number: 4 (lower is better)
Translates to: PCTPTSLVGVCATAVDTGTSVSP*DHEPTA
Trigger: GGCCGTGGGTTCGTGGTCCCAGGGGGAAACTGACGT...ACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACGCGGGCCTTACCTCCTaGAGACCAGCCACACAGAAG +
Preference number: 4 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHAGLTS*RPATQK
Trigger: CTTCTGTGTGGCTGGTCTCCAGGAGGTAAGGCCCGC...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR CCA 90 bp CGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCATGAGTCCAGCATGGTaGGAGCTGCAGGAGACGACT +
Preference number: 4 (lower is better)
Translates to: RPRPQLYLRDGRGGSEAPMSPAW*ELQETT
Trigger: AGTCGTCTCCTGCAGCTCCCACCATGCTGGACTCAT...GGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp AGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAAATCTGTGCTATGAGTaGCTGCTGAGGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SSCAGPFGVHTCPSMSAPNLCYE*LLRELL
Trigger: CAGCAGCTCCCTCAGCAGCCACTCATAGCACAGATT...TGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp GGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGGTTCTGCAGGACCAACTaGTGCACCTGTGCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: GLNFTSVMEEGDLRLPGGFCRTN*CTCAFC
Trigger: GCAGAACGCACAGGTGCACCAGTTGGTCCTGCAGAA...CCCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp TCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATTCTGCAGGACCAACTaGTGCACCTGTGCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SGWWRPRPQLYLRDGRGGFCRTN*CTCAFC
Trigger: GCAGAACGCACAGGTGCACCAGTTGGTCCTGCAGAA...TCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp ATGGAAGCACTGGGACAGGGTTCCTCCTTGTGCGGAACTTCAGGAATGAAAGAACCTCGGGGGCACATGTaGCGGGTCCTGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: MEALGQGSSLCGTSGMKEPRGHM*RVLQGW
Trigger: CCAGCCCTGCAGGACCCGCCACATGTGCCCCCGAGG...TTCTTTCATTCCTGAAGTTCCGCACAAGGAGGAACCCTGTCCCAGTGCTTCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR CCA 90 bp CCATGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGGCCACACAGCATGGTaGTGGTGGTGGTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PCTPTSLVGVCATAVDTGGHTAW*WWWWWC
Trigger: GCACCACCACCACCACCACCACCATGCTGTGTGGCC...ACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp TTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAACGGGCTGGAGGACAGTaGCAGCCCCAGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: LFHQAGGVHGLNFTSVMERAGGQ*QPQVAT
Trigger: TGTGGCCACCTGGGGCTGCCACTGTCCTCCAGCCCG...TTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp ACCCGGAGCAAGGGATGCCCCCTGGAATGGCCCCGTGACCAGAAAGCGAGCCTGAGGAACTTGCCTCAGTaGCCAAAATTGCTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: TRSKGCPLEWPRDQKASLRNLPQ*PKLLSC
Trigger: GCAAGAGAGCAATTTTGGCCACTGAGGCAAGTTCCT...CAGGCTCGCTTTCTGGTCACGGGGCCATTCCAGGGGGCATCCCTTGCTCCGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR CCA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACAGGGTGGGGAGACACTaGGAGGACAGGGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHRVGRH*EDRVRR
Trigger: TCTCCTCACCCTGTCCTCCCAGTGTCTCCCCACCCT...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR CCA 90 bp CACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCCCCAGAACCCTCAGACCTaGGGGAAGGGCAGTCGTGAC +
Preference number: 4 (lower is better)
Translates to: HPYFFSGSLCHSCGHRCPQNPQT*GKGSRD
Trigger: GTCACGACTGCCCTTCCCCCAGGTCTGAGGGTTCTG...GGGACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR CCA 90 bp AGTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCAGCTCTGCAGCTCAGTaGCAACTCTCTGGTCATCCT +
Preference number: 4 (lower is better)
Translates to: SVTASSCAGPFGVHTCPSSSAAQ*QLSGHP
Trigger: AGGATGACCAGAGAGTTGCCACTGAGCTGCAGAGCT...GGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp GTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCAAGCTCTGCAGCTCAGTaGCAACTCTCTGGTCATCCT +
Preference number: 4 (lower is better)
Translates to: VLLPVAALGPSVFTPARPSSAAQ*QLSGHP
Trigger: AGGATGACCAGAGAGTTGCCACTGAGCTGCAGAGCT...TGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR TCA 90 bp TCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGAAAGCTTATGTTCCGCTaGGCTCAAGCTGAGGGACGA +
Preference number: 4 (lower is better)
Translates to: SGWWRPRPQLYLRDGRGGKLMFR*AQAEGR
Trigger: TCGTCCCTCAGCTTGAGCTCAGCGGAACATAAGCTT...TCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp ATTTTTGAGACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATGCTTCCACGGCTTCCTaGGGGAGGTTGCAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: IFETGACSVVQAIVQWFHASTAS*GRLQGA
Trigger: GGCTCCCTGCAACCTCCCTCAGGAAGCCGTGGAAGC...ATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGTCTCAAAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR TCA 90 bp GAAGTGAGTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCATACTTCCTGACCGTTaGGTAGGGAAGGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: EVSVTASSCAGPFGVHTCILPDR*VGKAWG
Trigger: TCCCCAGGCCTTCCCTACTCAACGGTCAGGAAGTAT...GCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACACTCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR TCA 90 bp CCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCTGGAGTACTCTATGGCCATaGAAAGAGCAGAACACCACC +
Preference number: 4 (lower is better)
Translates to: PFGVHTCPSMSAPGGCPWSTLWP*KEQNTT
Trigger: GGTGGTGTTCTGCTCTTTTCATGGCCATAGAGTACT...CCAGGGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR GCA 90 bp TTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAACAGTTAAGGACGGCCTaGGCGAGGTCACCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LFHQAGGVHGLNFTSVMEQLRTA*ARSPAL
Trigger: CAGGGCCGGTGACCTCGCGCAGGCCGTCCTTAACTG...TTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR GCA 90 bp ATTTTTGAGACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATTGGTGGTGGTGGTGGTaGACGGCAGGCAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: IFETGACSVVQAIVQWFHWWWWW*TAGSLG
Trigger: GCCAAGGCTGCCTGCCGTGCACCACCACCACCACCA...ATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGTCTCAAAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp TTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAAGGCCGATGCAGAGCTaGTGCACACGGGGACGGGGA +
Preference number: 4 (lower is better)
Translates to: LFHQAGGVHGLNFTSVMERPMQS*CTRGRG
Trigger: TCCCCGTCCCCGTGTGCAGCAGCTCTGCATCGGCCT...TTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp CATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGCACCCAAACCTTCCGTaGTTTCCACCTCTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: HQAGGVHGLNFTSVMEEGHPNLP*FPPLQA
Trigger: AGCTTGCAGAGGTGGAAACCACGGAAGGTTTGGGTG...CCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp ACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCAGAGCTCAGCCCACCTCCCTCCCTaGTTCTGTTACTCGCAGGAA +
Preference number: 4 (lower is better)
Translates to: TGACSVVQAIVQWFHQSSAHLPP*FCYSQE
Trigger: TTCCTGCGAGTAACAGAACCAGGGAGGGAGGTGGGC...TGAGCTCTGATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp AGAGAAGTGAGTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCGCCCACCTCCCTCCCTaGTTCTGTTACTCGCAGGAA +
Preference number: 4 (lower is better)
Translates to: REVSVTASSCAGPFGVHTAHLPP*FCYSQE
Trigger: TTCCTGCGAGTAACAGAACCAGGGAGGGAGGTGGGC...GGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACACTCACTTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp TGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCGAGGGCTCCTCTGCTTaGCCCGCTCCAGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: WMKSLFHQAGGVHGLNFTEGSSA*PAPGLG
Trigger: GCCCAGGCCTGGAGCGGGCCAAGCAGAGGAGCCCTC...GGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp TCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACCCTCGGGGGCACATGTaGCGGGTCCTGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SFWMKSLFHQAGGVHGLNPRGHM*RVLQGW
Trigger: CCAGCCCTGCAGGACCCGCCACATGTGCCCCCGAGG...GTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp AGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGCCTCGGGGGCACATGTaGCGGGTCCTGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RAQSLWNHLQEARKDGSEPRGHM*RVLQGW
Trigger: CCAGCCCTGCAGGACCCGCCACATGTGCCCCCGAGG...CTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000417060.5
CDS-3UTR CCA 90 bp TGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCAGCCCTGAGGAAGCCTaGGGGTGGAGGGTGCCCCGG +
Preference number: 4 (lower is better)
Translates to: WMKSLFHQAGGVHGLNFTSPEEA*GWRVPR
Trigger: CCGGGGCACCCTCCACCCCCAGGCTTCCTCAGGGCT...GGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp TGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCTGAGGCTCCCAGGTaGGCCGGCGCCGCCCTACAG +
Preference number: 4 (lower is better)
Translates to: WMKSLFHQAGGVHGLNFTSEAPR*AGAALQ
Trigger: CTGTAGGGCGGCGCCGGCCCACCTGGGAGCCTCAGA...GGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp GGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGGATTTCATCAGGCTGGTaGCGTCCACGGCCTCAACTT +
Preference number: 4 (lower is better)
Translates to: GLNFTSVMEEGDLRLPGGISSGW*RPRPQL
Trigger: AAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAAT...CCCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp GAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTCCCAGAAGCCAGCGCTaGGCGCCGCGTGACAGTTGC +
Preference number: 4 (lower is better)
Translates to: EIFISSGWWRPRPQLYLRPRSQR*APRDSC
Trigger: GCAACTGTCACGCGGCGCCCAGCGCTGGCTTCTGGG...ACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR CCA 90 bp CGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCCAGGATGGCCATGACTaGAAGACCCTTCCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: RPRPQLYLRDGRGGSEAPQDGHD*KTLPGL
Trigger: TAACCCTGGAAGGGTCTTCCAGTCATGGCCATCCTG...GGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp GGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGGCAGGATGGCCATGACTaGAAGACCCTTCCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: GLNFTSVMEEGDLRLPGGQDGHD*KTLPGL
Trigger: TAACCCTGGAAGGGTCTTCCAGTCATGGCCATCCTG...CCCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp GGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCGCAAACTTTCAAAGATaGAAGCACTGGGACAGGGTT +
Preference number: 4 (lower is better)
Translates to: GPFGVHTCPSMSAPGGCPANFQR*KHWDRV
Trigger: AACCCTGTCCCAGTGCTTCCATCTTTGAAAGTTTGC...GGGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000491666.5
CDS-3UTR CCA 90 bp GCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCTGAGAGCACAGAGTCTCTaGAATCACCTTCAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: ALRCSHLPVHVSTRWLSLRAQSL*NHLQEA
Trigger: TGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCT...CAGGGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp GGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCTAGAGCACAGAGTCTCTaGAATCACCTTCAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: GPSVFTPARPCQHQVAVPRAQSL*NHLQEA
Trigger: TGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCT...AGGGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR TCA 90 bp ATTTTTGAGACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCCGCTGAGCTCAAGCTaGGGGACGACGACCTCATGC +
Preference number: 4 (lower is better)
Translates to: IFETGACSVVQAIVQWFHPLSSS*GTTTSC
Trigger: GCATGAGGTCGTCGTCCCTCAGCTTGAGCTCAGCGG...ATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGTCTCAAAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp CACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCCCGAGGAATCTGTGCTATaGGTGGCTGCTGAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: HPYFFSGSLCHSCGHRCPEESVL*VAAEGA
Trigger: AGCTCCCTCAGCAGCCACTCATAGCACAGATTCCTC...GGGACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp GTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATTCCTTAATACTTCCTaGCCGTTGAGTAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: VLLPVAALGPSVFTPARPFLNTS*PLSREG
Trigger: GCCTTCCCTACTCAACGGTCAGGAAGTATTAAGGAA...TGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR TCA 90 bp AGTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCTTCCTTAATACTTCCTaGCCGTTGAGTAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SVTASSCAGPFGVHTCPSFLNTS*PLSREG
Trigger: GCCTTCCCTACTCAACGGTCAGGAAGTATTAAGGAA...GGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR TCA 90 bp TGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTGGAAGAGGGGGATCTaGGGCTCCCAGGTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: WMKSLFHQAGGVHGLNFTWKRGI*GSQVGR
Trigger: CCGGCCCACCTGGGAGCCTCAGATCCCCCTCTTCCA...GGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp ACCCGGAGCAAGGGATGCCCCCTGGAATGGCCCCGTGACCAGAAAGCGAGCCTGTTCTGTTCTGGCTCCTaGGCTGAGATTTTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: TRSKGCPLEWPRDQKASLFCSGS*AEIFLN
Trigger: GTTTAAGAAAATCTCAGCTCAGGAGCCAGAACAGAA...CAGGCTCGCTTTCTGGTCACGGGGCCATTCCAGGGGGCATCCCTTGCTCCGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR TCA 90 bp TTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAACCAGGGTTATGTGCATaGGGGTGGCCTCCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: LFHQAGGVHGLNFTSVMEPGLCA*GWPPGV
Trigger: GACTCCGGGAGGCCACCCTCATGCACATAACCCTGG...TTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp TTAAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCAGCGCGCGCGCCAGCTaGGAAAACGCCCACCCCGGC +
Preference number: 4 (lower is better)
Translates to: LNSFWMKSLFHQAGGVHGSARAS*ENAHPG
Trigger: GCCGGGGTGGGCGTTTTCTCAGCTGGCGCGCGCGCT...GCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397680.5
CDS-3UTR GCA 90 bp TTAAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCCAAGCGGCGGGGCCTaGAGGTCCAGGCGGTTCGCG +
Preference number: 4 (lower is better)
Translates to: LNSFWMKSLFHQAGGVHGPSGGA*RSRRFA
Trigger: CGCGAACCGCCTGGACCTGCAGGCCCCGCCGCTTGG...GCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp GAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTACAGGTCACAGGCGGTaGGGACCCCGGGACTGTGTC +
Preference number: 4 (lower is better)
Translates to: EIFISSGWWRPRPQLYLRTGHRR*GPRDCV
Trigger: GACACAGTCCCGGGGTCCGCACCGCCTGTGACCTGT...ACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp CACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCCCGGGCATCGTTACTGCTaGAAACAAGCACACGGCCCT +
Preference number: 4 (lower is better)
Translates to: HPYFFSGSLCHSCGHRCPGHRYC*KQAHGP
Trigger: AGGGCCGTGTGCTTGTTTGCAGCAGTAACGATGCCC...GGGACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR GCA 90 bp CACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCCCGTCAGTCGGGTCACTTaGTCTGCTGCTGATGAGTCC +
Preference number: 4 (lower is better)
Translates to: HPYFFSGSLCHSCGHRCPVSRVT*SAADES
Trigger: GGACTCATCAGCAGCAGAGCAAGTGACCCGACTGAC...GGGACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp GAAGTGAGTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCACGTTCTGCCGTTCTTaGTCCAGCTTCTGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: EVSVTASSCAGPFGVHTCTFCRS*SSFCPK
Trigger: CTTGGGACAGAAGCTGGAGCAAGAACGGCAGAACGT...GCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACACTCACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp TTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAACTCTTCAGAGCAGTCTaGAGGGCATCGTCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: LFHQAGGVHGLNFTSVMELFRAV*RASSGR
Trigger: CCGGCCGGACGATGCCCTGCAGACTGCTCTGAAGAG...TTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp TGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCACCCGAGGGCTCCTCTaGTTGGCCCGCTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: WMKSLFHQAGGVHGLNFTTRGLL*LARSRP
Trigger: AGGCCTGGAGCGGGCCAAGCAGAGGAGCCCTCGGGT...GGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp TTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTACATGTGGCGGGTCCTaGAGGGCTGGGGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: FLDEIFISSGWWRPRPQLTCGGS*RAGGRA
Trigger: GGCCCTGCCCCCAGCCCTGCAGGACCCGCCACATGT...AAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp CAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTACATGTGGCGGGTCCTaGAGGGCTGGGGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QSLWNHLQEARKDGSERSTCGGS*RAGGRA
Trigger: GGCCCTGCCCCCAGCCCTGCAGGACCCGCCACATGT...ACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000417060.5
CDS-3UTR GCA 90 bp TTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAATCCCCAGGAGGAGCCTaGAGTCCACACTCGCGTAGC +
Preference number: 4 (lower is better)
Translates to: LFHQAGGVHGLNFTSVMESPGGA*SPHSRS
Trigger: GCTACGCGAGTGTGGACTGCAGGCTCCTCCTGGGGA...TTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp TCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGAACGTTCTGCCGTTCTTaGTCCAGCTTCTGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: SGWWRPRPQLYLRDGRGGTFCRS*SSFCEE
Trigger: TTCCTCACAGAAGCTGGAGCAAGAACGGCAGAACGT...TCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397679.5
ENST00000397682.7
CDS-3UTR GCA 90 bp GAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGACCGATGCAGAGCTGCTaGACACGGGGACGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: EHRVSGITFKRHEKMVLRPMQSC*TRGRGA
Trigger: GGCTCCCCGTCCCCGTGTGCAGCAGCTCTGCATCGG...TCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR GCA 90 bp TGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTCAGAGATGCTTCCTTaGCAGATTCTCCTTTTCGTT +
Preference number: 4 (lower is better)
Translates to: CAGPFGVHTCPSMSAPGGSEMLP*QILLFV
Trigger: AACGAAAAGGAGAATCTGGCAAGGAAGCATCTCTGA...GCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR GCA 90 bp AGAGAAGTGAGTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCTGCTGCAGGCTCTaGCCACATCAGAGATGCTTC +
Preference number: 4 (lower is better)
Translates to: REVSVTASSCAGPFGVHTCCCRL*PHQRCF
Trigger: GAAGCATCTCTGATGTGGGCAGAGCCTGCAGCAGCA...GGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACACTCACTTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR CCA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACCATTCGGCGGGCTGGTaGCGTAGGATTTTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHHSAGW*RRILFR
Trigger: CCGAAACAAAATCCTACGCCACCAGCCCGCCGAATG...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp ACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCAGAGCTCAGCGCATTCGGCGGGCTaGTGGCGTAGGATTTTGTTT +
Preference number: 4 (lower is better)
Translates to: TGACSVVQAIVQWFHQSSAHSAG*WRRILF
Trigger: AAACAAAATCCTACGCCACCAGCCCGCCGAATGCGC...TGAGCTCTGATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp CCATGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGCCCACCTCCCTCCCTaGTTCTGTTACTCGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PCTPTSLVGVCATAVDTGAHLPP*FCYSQE
Trigger: TTCCTGCGAGTAACAGAACCAGGGAGGGAGGTGGGC...ACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp TGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCGCCCACCTCCCTCCCTaGTTCTGTTACTCGCAGGAA +
Preference number: 4 (lower is better)
Translates to: CTPTSLVGVCATAVDTGVAHLPP*FCYSQE
Trigger: TTCCTGCGAGTAACAGAACCAGGGAGGGAGGTGGGC...GACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp CACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCCCATGAGTCCAGCATGGTaGGAGCTGCAGGAGACGACT +
Preference number: 4 (lower is better)
Translates to: HPYFFSGSLCHSCGHRCPMSPAW*ELQETT
Trigger: AGTCGTCTCCTGCAGCTCCCACCATGCTGGACTCAT...GGGACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp GCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAGGGATGGGGAGGCAGTaGGTAGGATGCCCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: AQSLWNHLQEARKDGSERGMGRQ*VGCPWG
Trigger: CCCCCACGGGCATCCTACCCACTGCCTCCCCATCCC...TCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp ACGAGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGATCCTTGGCGGGTCTaGGGCCAGCGGGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: TRAQSLWNHLQEARKDGSDPWRV*GQRGWG
Trigger: TCCCCATCCCCGCTGGCCCCAGACCCGCCAAGGATC...AGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp AGAGAAGTGAGTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTTCTGCAGGACCAACTaGTGCACCTGTGCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: REVSVTASSCAGPFGVHTFCRTN*CTCAFC
Trigger: GCAGAACGCACAGGTGCACCAGTTGGTCCTGCAGAA...GGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACACTCACTTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp AAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCCTCGGGGGCACATGTaGCGGGTCCTGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KLFLDEIFISSGWWRPRPPRGHM*RVLQGW
Trigger: CCAGCCCTGCAGGACCCGCCACATGTGCCCCCGAGG...AGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp TCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTGGCCTGGCAGCTCGTaGGACCCTCGGGGGCACATG +
Preference number: 4 (lower is better)
Translates to: SFWMKSLFHQAGGVHGLNWPGSS*DPRGHM
Trigger: CATGTGCCCCCGAGGGTCCCACGAGCTGCCAGGCCA...GTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp TGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCCGGGCTGGAGGACAGTaGCAGCCCCAGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: WMKSLFHQAGGVHGLNFTRAGGQ*QPQVAT
Trigger: TGTGGCCACCTGGGGCTGCCACTGTCCTCCAGCCCG...GGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp TCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACCGGGCTGGAGGACAGTaGCAGCCCCAGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: SFWMKSLFHQAGGVHGLNRAGGQ*QPQVAT
Trigger: TGTGGCCACCTGGGGCTGCCACTGTCCTCCAGCCCG...GTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp ATTTTTGAGACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATGACTCACACTCAGGGTaGGCCAGGCGTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: IFETGACSVVQAIVQWFHDSHSG*ARRPQA
Trigger: AGCCTGTGGACGCCTGGCCCACCCTGAGTGTGAGTC...ATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGTCTCAAAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp TTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGGATGCCCCCTGGAATaGCCCCGTGACCAGAAAGCG +
Preference number: 4 (lower is better)
Translates to: LFHQAGGVHGLNFTSVMEGCPLE*PRDQKA
Trigger: CGCTTTCTGGTCACGGGGCCATTCCAGGGGGCATCC...TTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp ATTTTTGAGACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATGCAAGGGATGCCCCCTaGAATGGCCCCGTGACCAGA +
Preference number: 4 (lower is better)
Translates to: IFETGACSVVQAIVQWFHARDAP*NGPVTR
Trigger: TCTGGTCACGGGGCCATTCCAGGGGGCATCCCTTGC...ATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGTCTCAAAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp GGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGGTTTATTTCATCAGGCTaGTGGCGTCCACGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: GLNFTSVMEEGDLRLPGGFISSG*WRPRPQ
Trigger: TTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAA...CCCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp GGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGAGCGTGGTCTGCACTTaGTTGGGCATTAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: GGVHGLNFTSVMEEGDLRSVVCT*LGIKLH
Trigger: GTGGAGTTTAATGCCCAACCAAGTGCAGACCACGCT...CCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR CCA 90 bp ACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCAGAGCTCACGCAAAACAGGAGCGTaGTCTGCACTTGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: TGACSVVQAIVQWFHQSSRKTGA*SALGWA
Trigger: TGCCCAACCAAGTGCAGACCACGCTCCTGTTTTGCG...TGAGCTCTGATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR CCA 90 bp GAAGTGAGTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCAGGATGGCCATGACTaGAAGACCCTTCCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: EVSVTASSCAGPFGVHTCQDGHD*KTLPGL
Trigger: TAACCCTGGAAGGGTCTTCCAGTCATGGCCATCCTG...GCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACACTCACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR TCA 90 bp CGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCTTCCTTAATACTTCCTaGCCGTTGAGTAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: RPRPQLYLRDGRGGSEAPFLNTS*PLSREG
Trigger: GCCTTCCCTACTCAACGGTCAGGAAGTATTAAGGAA...GGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp TCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACCCTGGAATGGCCCCGTaGCCAGAAAGCGAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: SFWMKSLFHQAGGVHGLNPGMAP*PESEPA
Trigger: GGCAGGCTCGCTTTCTGGTCACGGGGCCATTCCAGG...GTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR TCA 90 bp GAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTCGGGCAGGATGGCCATaGCTGGAAGACCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: EIFISSGWWRPRPQLYLRRAGWP*LEDPSR
Trigger: CCTGGAAGGGTCTTCCAGTCATGGCCATCCTGCCCG...ACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp GTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGGCTGGAAAGTCACCTTaGAAAGAGGAAATGGAGTCT +
Preference number: 4 (lower is better)
Translates to: VTASSCAGPFGVHTCPSMAGKSP*KEEMES
Trigger: AGACTCCATTTCCTCTTTTCAAGGTGACTTTCCAGC...CATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000491666.5
CDS-3UTR GCA 90 bp ATTTTTGAGACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATGGGACGACGACCTCATaGGACGTCAGTTTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: IFETGACSVVQAIVQWFHGTTTS*DVSFPL
Trigger: CAGGGGGAAACTGACGTCGCATGAGGTCGTCGTCCC...ATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGTCTCAAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACGAAGGGCATCGTTACTaGTGCAAACAAGCACACGGC +
Preference number: 4 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHEGHRY*CKQAHG
Trigger: GCCGTGTGCTTGTTTGCAGCAGTAACGATGCCCTTC...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR GCA 90 bp TCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACAGCACCGGTGTTGCCTaGAGGGCGGGCCTTACCTCC +
Preference number: 4 (lower is better)
Translates to: SFWMKSLFHQAGGVHGLNSTGVA*RAGLTS
Trigger: GGAGGTAAGGCCCGCCCTGCAGGCAACACCGGTGCT...GTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp AGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGCACCGGTGTTGCCTaGAGGGCGGGCCTTACCTCC +
Preference number: 4 (lower is better)
Translates to: RAQSLWNHLQEARKDGSESTGVA*RAGLTS
Trigger: GGAGGTAAGGCCCGCCCTGCAGGCAACACCGGTGCT...CTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR GCA 90 bp AGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGCCCAAGCACCGGTGTTaGCTGCAGGGCGGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: RAQSLWNHLQEARKDGSEPKHRC*LQGGPY
Trigger: GTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGG...CTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp GCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGACCCAAGCACCGGTGTTaGCTGCAGGGCGGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: AQSLWNHLQEARKDGSERPKHRC*LQGGPY
Trigger: GTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGG...TCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp CCATGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCAGTCGGGTCACTTaGTCTGCTGCTGATGAGTCC +
Preference number: 4 (lower is better)
Translates to: PCTPTSLVGVCATAVDTGVSRVT*SAADES
Trigger: GGACTCATCAGCAGCAGAGCAAGTGACCCGACTGAC...ACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp AGAGAAGTGAGTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCACGTTCTGCCGTTCTTaGTCCAGCTTCTGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: REVSVTASSCAGPFGVHTTFCRS*SSFCPK
Trigger: CTTGGGACAGAAGCTGGAGCAAGAACGGCAGAACGT...GGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACACTCACTTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp TTTAACGAGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGACCCGAGGGCTCCTCTaGTTGGCCCGCTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: FNESTESLESPSRGTKRWTRGLL*LARSRP
Trigger: AGGCCTGGAGCGGGCCAAGCAGAGGAGCCCTCGGGT...CCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp ACGAGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTTGGTGGTGGTGGTGGTaGACGGCAGGCAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: TRAQSLWNHLQEARKDGSWWWWW*TAGSLG
Trigger: GCCAAGGCTGCCTGCCGTGCACCACCACCACCACCA...AGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000417060.5
CDS-3UTR GCA 90 bp TCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACACCCGGAGCAAGGGATaGCCCCTGGAATGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: SFWMKSLFHQAGGVHGLNTRSKG*PLEWPR
Trigger: ACGGGGCCATTCCAGGGGGCATCCCTTGCTCCGGGT...GTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp TCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACCCTGGGAGGGGCTGTTaGCCTGGTGGGGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: SFWMKSLFHQAGGVHGLNPGRGC*PGGVHR
Trigger: CCTGTGAACCCCACCAGGGCAACAGCCCCTCCCAGG...GTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp CATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGCTCAGTGGCCAAAATTaGTCTCTTGCCCTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: HQAGGVHGLNFTSVMEEGLSGQN*SLALSS
Trigger: AGAACTGAGGGCAAGAGAGCAATTTTGGCCACTGAG...CCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR GCA 90 bp ATTTTTGAGACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATGCCTCCCGGAGTCTCTaGAGAAGGTCCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: IFETGACSVVQAIVQWFHASRSL*RRSLLL
Trigger: GAGAAGGAGGGACCTTCTGCAGAGACTCCGGGAGGC...ATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGTCTCAAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp CCATGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTCATTCGGCGGGCTGGTaGCGTAGGATTTTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: PCTPTSLVGVCATAVDTGHSAGW*RRILFR
Trigger: CCGAAACAAAATCCTACGCCACCAGCCCGCCGAATG...ACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp TGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCGCGCATTCGGCGGGCTaGTGGCGTAGGATTTTGTTT +
Preference number: 4 (lower is better)
Translates to: CTPTSLVGVCATAVDTGVAHSAG*WRRILF
Trigger: AAACAAAATCCTACGCCACCAGCCCGCCGAATGCGC...GACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp TGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCATGAGTCCAGCATGGTaGGAGCTGCAGGAGACGACT +
Preference number: 4 (lower is better)
Translates to: CTPTSLVGVCATAVDTGVMSPAW*ELQETT
Trigger: AGTCGTCTCCTGCAGCTCCCACCATGCTGGACTCAT...GACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp TTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTGGGTAGGATGCCCGTaGGGGGCAGCTCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: FLDEIFISSGWWRPRPQLWVGCP*GAALGA
Trigger: TGCCCCCAGAGCTGCCCCCCACGGGCATCCTACCCA...AAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp CAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTTGGGTAGGATGCCCGTaGGGGGCAGCTCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: QSLWNHLQEARKDGSERSWVGCP*GAALGA
Trigger: TGCCCCCAGAGCTGCCCCCCACGGGCATCCTACCCA...ACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp TTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTGGGATGGGGAGGCAGTaGGTAGGATGCCCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: FLDEIFISSGWWRPRPQLGMGRQ*VGCPWG
Trigger: CCCCCACGGGCATCCTACCCACTGCCTCCCCATCCC...AAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACAATCTGTGCTATGAGTaGCTGCTGAGGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHNLCYE*LLRELL
Trigger: CAGCAGCTCCCTCAGCAGCCACTCATAGCACAGATT...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp TTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTCGGGTCCTGCAGGGCTaGGGGCAGGGCCTTGAGCAT +
Preference number: 4 (lower is better)
Translates to: FLDEIFISSGWWRPRPQLRVLQG*GQGLEH
Trigger: ATGCTCAAGGCCCTGCCCCCAGCCCTGCAGGACCCG...AAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp GTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTGAGTCGGGTCCTGCAGGGCTaGGGGCAGGGCCTTGAGCAT +
Preference number: 4 (lower is better)
Translates to: VSGITFKRHEKMVLREVSRVLQG*GQGLEH
Trigger: ATGCTCAAGGCCCTGCCCCCAGCCCTGCAGGACCCG...ACTCACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000417060.5
CDS-3UTR CCA 90 bp TTTAACGAGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTGGCCTGGCAGCTCGTaGGACCCTCGGGGGCACATG +
Preference number: 4 (lower is better)
Translates to: FNESTESLESPSRGTKRWWPGSS*DPRGHM
Trigger: CATGTGCCCCCGAGGGTCCCACGAGCTGCCAGGCCA...CCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGTTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000417060.5
CDS-3UTR CCA 90 bp GAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTAGTGGCAGCCCCAGGTaGCCACACAGCATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: EIFISSGWWRPRPQLYLRSGSPR*PHSMVV
Trigger: CACCACCATGCTGTGTGGCCACCTGGGGCTGCCACT...ACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp TTTGAGCTTTTAACGAGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGACGGGCTGGAGGACAGTaGCAGCCCCAGGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: FELLTRAQSLWNHLQEARRAGGQ*QPQVAT
Trigger: TGTGGCCACCTGGGGCTGCCACTGTCCTCCAGCCCG...TCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGTTAAAAGCTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000417060.5
CDS-3UTR CCA 90 bp GAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGACTCACACTCAGGGTaGGCCAGGCGTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: EIFISSGWWRPRPQLYLRDSHSG*ARRPQA
Trigger: AGCCTGTGGACGCCTGGCCCACCCTGAGTGTGAGTC...ACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACATTTCATCAGGCTGGTaGCGTCCACGGCCTCAACTT +
Preference number: 4 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHISSGW*RPRPQL
Trigger: AAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAAT...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp AAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTAGGGGCCCAGACCTGTaGACCCGAGGGGCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: KLFLDEIFISSGWWRPRPRGPDL*TRGAEV
Trigger: GACCTCTGCCCCTCGGGTCCACAGGTCTGGGCCCCT...AGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR CCA 90 bp TCAAAGATGGAAGCACTGGGACAGGGTTCCTCCTTGTGCGGAACTTCAGGAATGATCTGTCACTCAGGGTaGGCCAGGCGTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: SKMEALGQGSSLCGTSGMICHSG*ARRPQA
Trigger: AGCCTGTGGACGCCTGGCCCACCCTGAGTGACAGAT...CATTCCTGAAGTTCCGCACAAGGAGGAACCCTGTCCCAGTGCTTCCATCTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR CCA 90 bp GAAGTGAGTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCAAAGATGGAAGCACTaGGACAGGGTTCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: EVSVTASSCAGPFGVHTCQRWKH*DRVPPC
Trigger: ACAAGGAGGAACCCTGTCCCAGTGCTTCCATCTTTG...GCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACACTCACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000491666.5
CDS-3UTR TCA 90 bp TGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCTTAAGTTGCAGTTGCTaGGGAGGCTGCAAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: CTPTSLVGVCATAVDTGVLSCSC*GGCKVS
Trigger: GCTCACCTTGCAGCCTCCTCAGCAACTGCAACTTAA...GACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR TCA 90 bp TGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCCTGGGGGCAGGGCCTTaGGCATCCAGTTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: WMKSLFHQAGGVHGLNFTLGAGP*ASSSAG
Trigger: TCCTGCAGAACTGGATGCTCAAGGCCCTGCCCCCAG...GGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp GAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGACTGGGGGCAGGGCCTTaGGCATCCAGTTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: EHRVSGITFKRHEKMVLRLGAGP*ASSSAG
Trigger: TCCTGCAGAACTGGATGCTCAAGGCCCTGCCCCCAG...TCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR TCA 90 bp TTAAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCTGGAAGAGGGGGATCTaGGGCTCCCAGGTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: LNSFWMKSLFHQAGGVHGWKRGI*GSQVGR
Trigger: CCGGCCCACCTGGGAGCCTCAGATCCCCCTCTTCCA...GCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp AAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAGTTAAGGACGGCCTaGGCGAGGTCACCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: KLFLDEIFISSGWWRPRPQLRTA*ARSPAL
Trigger: CAGGGCCGGTGACCTCGCGCAGGCCGTCCTTAACTG...AGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR GCA 90 bp AAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTAGCACCGGTGTTGCCTaGAGGGCGGGCCTTACCTCC +
Preference number: 4 (lower is better)
Translates to: KLFLDEIFISSGWWRPRPSTGVA*RAGLTS
Trigger: GGAGGTAAGGCCCGCCCTGCAGGCAACACCGGTGCT...AGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp AAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCCCAAGCACCGGTGTTaGCTGCAGGGCGGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: KLFLDEIFISSGWWRPRPPKHRC*LQGGPY
Trigger: GTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGG...AGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp TGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCACGTTCTGCCGTTCTTaGTCCAGCTTCTGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: CTPTSLVGVCATAVDTGVTFCRS*SSFCPK
Trigger: CTTGGGACAGAAGCTGGAGCAAGAACGGCAGAACGT...GACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397680.5
CDS-3UTR GCA 90 bp TTAAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCACCCGAGGGCTCCTCTaGTTGGCCCGCTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LNSFWMKSLFHQAGGVHGTRGLL*LARSRP
Trigger: AGGCCTGGAGCGGGCCAAGCAGAGGAGCCCTCGGGT...GCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp TTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAACAACTGGTGCACCTGTaGGTTCTGCAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LFHQAGGVHGLNFTSVMEQLVHL*VLQQQQ
Trigger: CTGCTGCTGCTGCAGAACGCACAGGTGCACCAGTTG...TTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp CTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTGAGTGTTGGTGGTGGTGGTGGTaGACGGCAGGCAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LWNHLQEARKDGSERSECWWWWW*TAGSLG
Trigger: GCCAAGGCTGCCTGCCGTGCACCACCACCACCACCA...ACACTCACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000417060.5
CDS-3UTR GCA 90 bp AAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTACCCGGAGCAAGGGATaGCCCCTGGAATGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: KLFLDEIFISSGWWRPRPTRSKG*PLEWPR
Trigger: ACGGGGCCATTCCAGGGGGCATCCCTTGCTCCGGGT...AGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp AAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTTCACAGGCCCCTCACTaGAGGGGACCCGGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: KLFLDEIFISSGWWRPRPSQAPH*RGPGAR
Trigger: CCTTGCTCCGGGTCCCCTGCAGTGAGGGGCCTGTGA...AGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp CCATGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTTTTAGTGGGAGTCTGTaGCACAGCTGTGGACACAGG +
Preference number: 4 (lower is better)
Translates to: PCTPTSLVGVCATAVDTGFSGSL*HSCGHR
Trigger: CCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAA...ACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp ATTTTTGAGACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATGCCAGGTTTCCACTGTaGGTCCTCAGGCTACCGGTA +
Preference number: 4 (lower is better)
Translates to: IFETGACSVVQAIVQWFHARFPL*VLRLPV
Trigger: TACCGGTAGCCTGAGGACGCACAGTGGAAACCTGGC...ATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGTCTCAAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR GCA 90 bp ATGGAAGCACTGGGACAGGGTTCCTCCTTGTGCGGAACTTCAGGAATGAAAGAACCTTCCAGGGTTATGTaGATGAGGGTGGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: MEALGQGSSLCGTSGMKEPSRVM*MRVASR
Trigger: CCGGGAGGCCACCCTCATGCACATAACCCTGGAAGG...TTCTTTCATTCCTGAAGTTCCGCACAAGGAGGAACCCTGTCCCAGTGCTTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR GCA 90 bp TTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTAGGCCGATGCAGAGCTaGTGCACACGGGGACGGGGA +
Preference number: 4 (lower is better)
Translates to: FLDEIFISSGWWRPRPQLRPMQS*CTRGRG
Trigger: TCCCCGTCCCCGTGTGCAGCAGCTCTGCATCGGCCT...AAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp TCAAAGATGGAAGCACTGGGACAGGGTTCCTCCTTGTGCGGAACTTCAGGAATGCTCCACATCTGCTGCTaGAGGCTCTGCCCACATCAG +
Preference number: 4 (lower is better)
Translates to: SKMEALGQGSSLCGTSGMLHICC*RLCPHQ
Trigger: CTGATGTGGGCAGAGCCTGCAGCAGCAGATGTGGAG...CATTCCTGAAGTTCCGCACAAGGAGGAACCCTGTCCCAGTGCTTCCATCTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR CCA 90 bp TGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCCCACACAGAAGACTGTaGCCTGAGTCAGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: CTPTSLVGVCATAVDTGVPHRRL*PESGEG
Trigger: TCCTTCTCCTGACTCAGGCCACAGTCTTCTGTGTGG...GACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR CCA 90 bp ACGAGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTTTTCCTGGCTCGAGGTaGAGGCCCTCAGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: TRAQSLWNHLQEARKDGSFPGSR*RPSGPP
Trigger: AGGGGGACCTGAGGGCCTCCACCTCGAGCCAGGAAA...AGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp ACGAGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTCCGGTCCTCATTTCCTaGCTCGAGGTGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: TRAQSLWNHLQEARKDGSPVLIS*LEVEAL
Trigger: GAGGGCCTCCACCTCGAGCCAGGAAATGAGGACCGG...AGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp TCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTGAGTGTTGGGATGGGGAGGCAGTaGGTAGGATGCCCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SGITFKRHEKMVLREVSVGMGRQ*VGCPWG
Trigger: CCCCCACGGGCATCCTACCCACTGCCTCCCCATCCC...AACACTCACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp TTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTAGGCAGGATGATCCTTaGCGGGTCTGGGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: FLDEIFISSGWWRPRPQLRQDDP*RVWGQR
Trigger: CCGCTGGCCCCAGACCCGCCAAGGATCATCCTGCCT...AAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp CAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTAGGCAGGATGATCCTTaGCGGGTCTGGGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: QSLWNHLQEARKDGSERSRQDDP*RVWGQR
Trigger: CCGCTGGCCCCAGACCCGCCAAGGATCATCCTGCCT...ACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp TCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACGGCCACACAGCATGGTaGTGGTGGTGGTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SFWMKSLFHQAGGVHGLNGHTAW*WWWWWC
Trigger: GCACCACCACCACCACCACCACCATGCTGTGTGGCC...GTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp GAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGGCCACACAGCATGGTaGTGGTGGTGGTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: EHRVSGITFKRHEKMVLRGHTAW*WWWWWC
Trigger: GCACCACCACCACCACCACCACCATGCTGTGTGGCC...TCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000417060.5
CDS-3UTR CCA 90 bp ACGAGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGGTGGCCACACAGCATaGTGGTGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TRAQSLWNHLQEARKDGSGGHTA*WWWWWW
Trigger: CCACCACCACCACCACCACCATGCTGTGTGGCCACC...AGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000417060.5
CDS-3UTR CCA 90 bp TCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACAGTGGCAGCCCCAGGTaGCCACACAGCATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SFWMKSLFHQAGGVHGLNSGSPR*PHSMVV
Trigger: CACCACCATGCTGTGTGGCCACCTGGGGCTGCCACT...GTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp ACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCAGAGCTCATTTATTTCATCAGGCTaGTGGCGTCCACGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: TGACSVVQAIVQWFHQSSFISSG*WRPRPQ
Trigger: TTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAA...TGAGCTCTGATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp GAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTACTCATCCCCAGGTGTaGCCAGCTGGGCTTCATGGG +
Preference number: 4 (lower is better)
Translates to: EIFISSGWWRPRPQLYLRTHPQV*PAGLHG
Trigger: CCCATGAAGCCCAGCTGGCCACACCTGGGGATGAGT...ACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR CCA 90 bp CCATGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTAAGAGAAGAGCCCTGTaGGAAGATAGCCACACCCTC +
Preference number: 4 (lower is better)
Translates to: PCTPTSLVGVCATAVDTGKRRAL*EDSHTL
Trigger: GAGGGTGTGGCTATCTTCCCACAGGGCTCTTCTCTT...ACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR CCA 90 bp GAGCTTTGGTTTGAGCTTTTAACGAGAGCACAGAGTCTCTGGAATCACCTTCAAAGGCTCAGGCCAGCCTaGGCCAGGTACAGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: ELWFELLTRAQSLWNHLQRLRPA*ARYRRL
Trigger: GAGGCGCCTGTACCTGGCCCAGGCTGGCCTGAGCCT...TTGAAGGTGATTCCAGAGACTCTGTGCTCTCGTTAAAAGCTCAAACCAAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR CCA 90 bp GCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGACCAGGTGGCTGTCCCTaGGGAGCTCTGCAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: AQSLWNHLQEARKDGSERPGGCP*GALQLS
Trigger: ACTGAGCTGCAGAGCTCCCCAGGGACAGCCACCTGG...TCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp GCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCTGATGGAGTCTGAGCTTTaGTTTGAGCTTTTAACGAGA +
Preference number: 4 (lower is better)
Translates to: ALRCSHLPVHVSTRWLSLMESEL*FELLTR
Trigger: TCTCGTTAAAAGCTCAAACCAAAGCTCAGACTCCAT...CAGGGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000491666.5
CDS-3UTR CCA 90 bp GCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGATCTGTCCTGCAGGGCTaGGGGCAGGGCCTTGAGCAT +
Preference number: 4 (lower is better)
Translates to: AQSLWNHLQEARKDGSERSVLQG*GQGLEH
Trigger: ATGCTCAAGGCCCTGCCCCCAGCCCTGCAGGACAGA...TCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491666.5
CDS-3UTR TCA 90 bp AAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCCGCTGAGCTCAAGCTaGGGGACGACGACCTCATGC +
Preference number: 4 (lower is better)
Translates to: KLFLDEIFISSGWWRPRPPLSSS*GTTTSC
Trigger: GCATGAGGTCGTCGTCCCTCAGCTTGAGCTCAGCGG...AGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp CTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTGAGTGTCTGGGGGCAGGGCCTTaGGCATCCAGTTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LWNHLQEARKDGSERSECLGAGP*ASSSAG
Trigger: TCCTGCAGAACTGGATGCTCAAGGCCCTGCCCCCAG...ACACTCACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR TCA 90 bp TTAAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCGGGGAAGGGCAGTCGTaGCCCCCTATGCACCACCAG +
Preference number: 4 (lower is better)
Translates to: LNSFWMKSLFHQAGGVHGGEGQS*PPMHHQ
Trigger: CTGGTGGTGCATAGGGGGTCACGACTGCCCTTCCCC...GCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR TCA 90 bp CCATGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTTGTGTGCTCCAGGAATaGCTAAGAGGCTTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PCTPTSLVGVCATAVDTGCVLQE*LRGFLS
Trigger: GGACAGAAAGCCTCTTAGTCATTCCTGGAGCACACA...ACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397679.5
ENST00000397682.7
CDS-3UTR GCA 90 bp ATTTTTGAGACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCTCGCAGGAAAGAACTaGTCAGCAGGAGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: IFETGACSVVQAIVQWFHLAGKN*SAGAQA
Trigger: TGCTTGGGCTCCTGCTGAGCAGTTCTTTCCTGCGAG...ATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGTCTCAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp CAAACTTTCAAAGATGGAAGCACTGGGACAGGGTTCCTCCTTGTGCGGAACTTCCCCCCTTCCACGTTCTaGCGTTCTTGCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QTFKDGSTGTGFLLVRNFPPSTF*RSCSSF
Trigger: GAAGCTGGAGCAAGAACGGCAGAACGTGGAAGGGGG...GAAGTTCCGCACAAGGAGGAACCCTGTCCCAGTGCTTCCATCTTTGAAAGTTTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR GCA 90 bp AAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCTCTTCAGAGCAGTCTaGAGGGCATCGTCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: KLFLDEIFISSGWWRPRPLFRAV*RASSGR
Trigger: CCGGCCGGACGATGCCCTGCAGACTGCTCTGAAGAG...AGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp CTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTGAGTGTCTCTTCAGAGCAGTCTaGAGGGCATCGTCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: LWNHLQEARKDGSERSECLFRAV*RASSGR
Trigger: CCGGCCGGACGATGCCCTGCAGACTGCTCTGAAGAG...ACACTCACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp ATTTTTGAGACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATTGTTCCCGGAGTCTCTaGAGAAGGTCCCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: IFETGACSVVQAIVQWFHCSRSL*RRSLLL
Trigger: GAGAAGGAGGGACCTTCTGCAGAGACTCCGGGAACA...ATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGTCTCAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291691.12
CDS-3UTR GCA 90 bp ATTTTTGAGACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATGGGAGGAGGAATCTGTaGTATGAGTGGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: IFETGACSVVQAIVQWFHGRRNL*YEWLLR
Trigger: CCTCAGCAGCCACTCATAGCACAGATTCCTCCTCCC...ATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGTCTCAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp TTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTCCCCAGGAGGAGCCTaGAGTCCACACTCGCGTAGC +
Preference number: 4 (lower is better)
Translates to: FLDEIFISSGWWRPRPQLSPGGA*SPHSRS
Trigger: GCTACGCGAGTGTGGACTGCAGGCTCCTCCTGGGGA...AAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp TTAAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCCTGGGAGGGGCTGTTaGCCTGGTGGGGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: LNSFWMKSLFHQAGGVHGPGRGC*PGGVHR
Trigger: CCTGTGAACCCCACCAGGGCAACAGCCCCTCCCAGG...GCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACGTATCTATGGTTGTGTaGCTGTCCTGTCTTCCAACC +
Preference number: 4 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHVSMVV*LSCLPT
Trigger: GGTTGGAAGACAGGACAGGCACACAACCATAGATAC...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR GCA 90 bp CATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGCCAAAATTGCTCTCTTaGCCTCAGTTCTGTAAATGG +
Preference number: 4 (lower is better)
Translates to: HQAGGVHGLNFTSVMEEGPKLLS*PQFCKW
Trigger: CCATTTACAGAACTGAGGGCAAGAGAGCAATTTTGG...CCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR GCA 90 bp TGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCCCTTCCAGGGTTATGTaGATGAGGGTGGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: WMKSLFHQAGGVHGLNFTPSRVM*MRVASR
Trigger: CCGGGAGGCCACCCTCATGCACATAACCCTGGAAGG...GGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp TCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACGCGGGCCTTACCTCCTaGAGACCAGCCACACAGAAG +
Preference number: 4 (lower is better)
Translates to: SFWMKSLFHQAGGVHGLNAGLTS*RPATQK
Trigger: CTTCTGTGTGGCTGGTCTCCAGGAGGTAAGGCCCGC...GTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR CCA 90 bp TTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAATGAGTCCAGCATGGTaGGAGCTGCAGGAGACGACT +
Preference number: 4 (lower is better)
Translates to: LFHQAGGVHGLNFTSVMEMSPAW*ELQETT
Trigger: AGTCGTCTCCTGCAGCTCCCACCATGCTGGACTCAT...TTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp CAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTTTTCCTGGCTCGAGGTaGAGGCCCTCAGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: QSLWNHLQEARKDGSERSFPGSR*RPSGPP
Trigger: AGGGGGACCTGAGGGCCTCCACCTCGAGCCAGGAAA...ACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp TTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTCCGGTCCTCATTTCCTaGCTCGAGGTGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: FLDEIFISSGWWRPRPQLPVLIS*LEVEAL
Trigger: GAGGGCCTCCACCTCGAGCCAGGAAATGAGGACCGG...AAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp AAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCCGGTCCTCATTTCCTaGCTCGAGGTGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: KLFLDEIFISSGWWRPRPPVLIS*LEVEAL
Trigger: GAGGGCCTCCACCTCGAGCCAGGAAATGAGGACCGG...AGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp TTTGAGCTTTTAACGAGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGACCGGTCCTCATTTCCTaGCTCGAGGTGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: FELLTRAQSLWNHLQEARPVLIS*LEVEAL
Trigger: GAGGGCCTCCACCTCGAGCCAGGAAATGAGGACCGG...TCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGTTAAAAGCTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp TTAAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCAGGCAGGATGATCCTTaGCGGGTCTGGGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: LNSFWMKSLFHQAGGVHGRQDDP*RVWGQR
Trigger: CCGCTGGCCCCAGACCCGCCAAGGATCATCCTGCCT...GCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp GAGCTTTGGTTTGAGCTTTTAACGAGAGCACAGAGTCTCTGGAATCACCTTCAAAGGCAGGATGATCCTTaGCGGGTCTGGGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: ELWFELLTRAQSLWNHLQRQDDP*RVWGQR
Trigger: CCGCTGGCCCCAGACCCGCCAAGGATCATCCTGCCT...TTGAAGGTGATTCCAGAGACTCTGTGCTCTCGTTAAAAGCTCAAACCAAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000491666.5
CDS-3UTR CCA 90 bp TTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTGGTGGCCACACAGCATaGTGGTGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: FLDEIFISSGWWRPRPQLGGHTA*WWWWWW
Trigger: CCACCACCACCACCACCACCATGCTGTGTGGCCACC...AAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp AAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTGGTGGCCACACAGCATaGTGGTGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KLFLDEIFISSGWWRPRPGGHTA*WWWWWW
Trigger: CCACCACCACCACCACCACCATGCTGTGTGGCCACC...AGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp AAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTGACTCACACTCAGGGTaGGCCAGGCGTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: KLFLDEIFISSGWWRPRPDSHSG*ARRPQA
Trigger: AGCCTGTGGACGCCTGGCCCACCCTGAGTGTGAGTC...AGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR CCA 90 bp AAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTGGATATGTCCCACCTTaGGGCTGGGGGCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: KLFLDEIFISSGWWRPRPGYVPP*GWGHWA
Trigger: TGCCCAGTGCCCCCAGCCCCAAGGTGGGACATATCC...AGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR CCA 90 bp AGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGGCGGGCCTTACCTCCTaGAGACCAGCCAGAGTACTC +
Preference number: 4 (lower is better)
Translates to: RAQSLWNHLQEARKDGSEAGLTS*RPARVL
Trigger: GAGTACTCTGGCTGGTCTCCAGGAGGTAAGGCCCGC...CTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR CCA 90 bp AAACTTTCAAAGATGGAAGCACTGGGACAGGGTTCCTCCTTGTGCGGAACTTCACATGTCAGCACCAGGTaGCTGTCCCTGGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: KLSKMEALGQGSSLCGTSHVSTR*LSLGSS
Trigger: AGAGCTCCCCAGGGACAGCCACCTGGTGCTGACATG...TGAAGTTCCGCACAAGGAGGAACCCTGTCCCAGTGCTTCCATCTTTGAAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR CCA 90 bp ACGAGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTCATGTCAGCACCAGGTaGCTGTCCCTGGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: TRAQSLWNHLQEARKDGSHVSTR*LSLGSS
Trigger: AGAGCTCCCCAGGGACAGCCACCTGGTGCTGACATG...AGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR TCA 90 bp TTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAAAGCTTATGTTCCGCTaGGCTCAAGCTGAGGGACGA +
Preference number: 4 (lower is better)
Translates to: LFHQAGGVHGLNFTSVMEKLMFR*AQAEGR
Trigger: TCGTCCCTCAGCTTGAGCTCAGCGGAACATAAGCTT...TTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp CATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGTTCTGGCTCCTGAGCTaGGATTTTCTTAAACTCTTT +
Preference number: 4 (lower is better)
Translates to: HQAGGVHGLNFTSVMEEGFWLLS*DFLKLF
Trigger: AAAGAGTTTAAGAAAATCTCAGCTCAGGAGCCAGAA...CCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp TCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATTCTGGCTCCTGAGCTaGGATTTTCTTAAACTCTTT +
Preference number: 4 (lower is better)
Translates to: SGWWRPRPQLYLRDGRGGFWLLS*DFLKLF
Trigger: AAAGAGTTTAAGAAAATCTCAGCTCAGGAGCCAGAA...TCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp TTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAATTGCTCCAGCTTCTGTaGGGAAGAGAGACCGTGACA +
Preference number: 4 (lower is better)
Translates to: LFHQAGGVHGLNFTSVMELLQLL*GRETVT
Trigger: TGTCACGGTCTCTCTTCCTCACAGAAGCTGGAGCAA...TTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397679.5
ENST00000397682.7
CDS-3UTR GCA 90 bp ACGAGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTCCCCCTTCCACGTTCTaGCGTTCTTGCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TRAQSLWNHLQEARKDGSPPSTF*RSCSSF
Trigger: GAAGCTGGAGCAAGAACGGCAGAACGTGGAAGGGGG...AGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp TTAAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCTTCAGAGCAGTCTaGAGGGCATCGTCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: LNSFWMKSLFHQAGGVHGLFRAV*RASSGR
Trigger: CCGGCCGGACGATGCCCTGCAGACTGCTCTGAAGAG...GCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp ATGGAAGCACTGGGACAGGGTTCCTCCTTGTGCGGAACTTCAGGAATGAAAGAAGGGAGGAGGAATCTGTaGTATGAGTGGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: MEALGQGSSLCGTSGMKEGRRNL*YEWLLR
Trigger: CCTCAGCAGCCACTCATAGCACAGATTCCTCCTCCC...TTCTTTCATTCCTGAAGTTCCGCACAAGGAGGAACCCTGTCCCAGTGCTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR GCA 90 bp TGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCCAACTGGTGCACCTGTaGGTTCTGCAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: WMKSLFHQAGGVHGLNFTQLVHL*VLQQQQ
Trigger: CTGCTGCTGCTGCAGAACGCACAGGTGCACCAGTTG...GGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp TGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTGCAGGACCAACTGGTaGACCTGTGCGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WMKSLFHQAGGVHGLNFTCRTNW*TCAFCS
Trigger: GCTGCAGAACGCACAGGTGCACCAGTTGGTCCTGCA...GGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp ATTTTTGAGACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATTTTAGTGGGAGTCTGTaGCACAGCTGTGGACACAGG +
Preference number: 4 (lower is better)
Translates to: IFETGACSVVQAIVQWFHFSGSL*HSCGHR
Trigger: CCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAA...ATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGTCTCAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp CAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTTTCCTGCAAGGCCGATaGAGAGCTGCTGCACACGGG +
Preference number: 4 (lower is better)
Translates to: QSLWNHLQEARKDGSERSFLQGR*RAAAHG
Trigger: CCCGTGTGCAGCAGCTCTGCATCGGCCTTGCAGGAA...ACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR CCA 90 bp ATTTTTGAGACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCACCCAAACCTTCCGTaGTTTCCACCTCTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: IFETGACSVVQAIVQWFHHPNLP*FPPLQA
Trigger: AGCTTGCAGAGGTGGAAACCACGGAAGGTTTGGGTG...ATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGTCTCAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp ATTTTTGAGACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCCACACAGAAGACTGTaGCCTGAGTCAGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: IFETGACSVVQAIVQWFHPHRRL*PESGEG
Trigger: TCCTTCTCCTGACTCAGGCCACAGTCTTCTGTGTGG...ATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGTCTCAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR CCA 90 bp TTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAAATCTGTGCTATGAGTaGCTGCTGAGGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LFHQAGGVHGLNFTSVMENLCYE*LLRELL
Trigger: CAGCAGCTCCCTCAGCAGCCACTCATAGCACAGATT...TTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp TTAAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCGGTGGCCACACAGCATaGTGGTGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LNSFWMKSLFHQAGGVHGGGHTA*WWWWWW
Trigger: CCACCACCACCACCACCACCATGCTGTGTGGCCACC...GCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp TTAAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCAGTGGCAGCCCCAGGTaGCCACACAGCATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LNSFWMKSLFHQAGGVHGSGSPR*PHSMVV
Trigger: CACCACCATGCTGTGTGGCCACCTGGGGCTGCCACT...GCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp TCTGAGCTTTGGTTTGAGCTTTTAACGAGAGCACAGAGTCTCTGGAATCACCTTAGTGGCAGCCCCAGGTaGCCACACAGCATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SELWFELLTRAQSLWNHLSGSPR*PHSMVV
Trigger: CACCACCATGCTGTGTGGCCACCTGGGGCTGCCACT...AAGGTGATTCCAGAGACTCTGTGCTCTCGTTAAAAGCTCAAACCAAAGCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR CCA 90 bp TGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCCCAGGTGTGGCCAGCTaGGCTTCATGGGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: WMKSLFHQAGGVHGLNFTPGVAS*ASWEGK
Trigger: TTTGCCTTCCCATGAAGCCCAGCTGGCCACACCTGG...GGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR TCA 90 bp ACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCAGAGCTCATTCTGTTCTGGCTCCTaGGCTGAGATTTTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: TGACSVVQAIVQWFHQSSFCSGS*AEIFLN
Trigger: GTTTAAGAAAATCTCAGCTCAGGAGCCAGAACAGAA...TGAGCTCTGATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp TTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTAAGCTTCGCAGAGGGTaGCGCAAAACAGGAGCGTGG +
Preference number: 4 (lower is better)
Translates to: FLDEIFISSGWWRPRPQLKLRRG*RKTGAW
Trigger: CCACGCTCCTGTTTTGCGTCACCCTCTGCGAAGCTT...AAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR GCA 90 bp TTAAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCGGGACGACGACCTCATaGGACGTCAGTTTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: LNSFWMKSLFHQAGGVHGGTTTS*DVSFPL
Trigger: CAGGGGGAAACTGACGTCGCATGAGGTCGTCGTCCC...GCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp AGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGCTCGCAGGAAAGAACTaGTCAGCAGGAGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: RAQSLWNHLQEARKDGSELAGKN*SAGAQA
Trigger: TGCTTGGGCTCCTGCTGAGCAGTTCTTTCCTGCGAG...CTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp TGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCGTCAGTCGGGTCACTTaGTCTGCTGCTGATGAGTCC +
Preference number: 4 (lower is better)
Translates to: WMKSLFHQAGGVHGLNFTVSRVT*SAADES
Trigger: GGACTCATCAGCAGCAGAGCAAGTGACCCGACTGAC...GGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp AAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCCCCCTTCCACGTTCTaGCGTTCTTGCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KLFLDEIFISSGWWRPRPPPSTF*RSCSSF
Trigger: GAAGCTGGAGCAAGAACGGCAGAACGTGGAAGGGGG...AGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp TCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACGGGAGGAGGAATCTGTaGTATGAGTGGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SFWMKSLFHQAGGVHGLNGRRNL*YEWLLR
Trigger: CCTCAGCAGCCACTCATAGCACAGATTCCTCCTCCC...GTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp TTAAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCACCAGAAAGCGAGCCTaGCCAGCTTCCCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LNSFWMKSLFHQAGGVHGTRKRA*PASPGG
Trigger: TCCTCCTGGGGAAGCTGGGCAGGCTCGCTTTCTGGT...GCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS-3UTR GCA 90 bp GAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTTTTAGTGGGAGTCTGTaGCACAGCTGTGGACACAGG +
Preference number: 4 (lower is better)
Translates to: EIFISSGWWRPRPQLYLRFSGSL*HSCGHR
Trigger: CCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAA...ACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp TTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAACGTTCTGCCGTTCTTaGTCCAGCTTCTGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: LFHQAGGVHGLNFTSVMETFCRS*SSFCEE
Trigger: TTCCTCACAGAAGCTGGAGCAAGAACGGCAGAACGT...TTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397679.5
ENST00000397682.7
CDS-3UTR GCA 90 bp TCAAAGATGGAAGCACTGGGACAGGGTTCCTCCTTGTGCGGAACTTCAGGAATGACGTTCTGCCGTTCTTaGTCCAGCTTCTGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: SKMEALGQGSSLCGTSGMTFCRS*SSFCEE
Trigger: TTCCTCACAGAAGCTGGAGCAAGAACGGCAGAACGT...CATTCCTGAAGTTCCGCACAAGGAGGAACCCTGTCCCAGTGCTTCCATCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR GCA 90 bp CTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTGAGTGTGTTACTGCCAGTAGCTaGGCTGGGCCCTTCGGTGTT +
Preference number: 4 (lower is better)
Translates to: LWNHLQEARKDGSERSECVTASS*AGPFGV
Trigger: AACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAAC...ACACTCACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp GTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTGAGTGTTACTGCCAGTAGCTaGGCTGGGCCCTTCGGTGTT +
Preference number: 4 (lower is better)
Translates to: VSGITFKRHEKMVLREVSVTASS*AGPFGV
Trigger: AACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAAC...ACTCACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp GCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAATGAGTCCAGCATGGTaGGAGCTGCAGGAGACGACT +
Preference number: 4 (lower is better)
Translates to: AQSLWNHLQEARKDGSERMSPAW*ELQETT
Trigger: AGTCGTCTCCTGCAGCTCCCACCATGCTGGACTCAT...TCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp TGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTTCTGCAGGACCAACTaGTGCACCTGTGCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: WMKSLFHQAGGVHGLNFTFCRTN*CTCAFC
Trigger: GCAGAACGCACAGGTGCACCAGTTGGTCCTGCAGAA...GGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp GGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGGTTCACACTTCCATGTaGCTAAAGCTATTGATCTTT +
Preference number: 4 (lower is better)
Translates to: GGVHGLNFTSVMEEGDLRVHTSM*LKLLIF
Trigger: AAAGATCAATAGCTTTAGCCACATGGAAGTGTGAAC...CCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACAATAAAGGGGTTAGCTaGAGGAATACTCCACAGTTA +
Preference number: 4 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHNKGVS*RNTPQL
Trigger: TAACTGTGGAGTATTCCTTCAGCTAACCCCTTTATT...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR TCA 90 bp CTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTGAGTGTGAGGAATCTGTGCTATaGGTGGCTGCTGAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: LWNHLQEARKDGSERSECEESVL*VAAEGA
Trigger: AGCTCCCTCAGCAGCCACTCATAGCACAGATTCCTC...ACACTCACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR TCA 90 bp GTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTGAGTATACTTCCTGACCGTTaGGTAGGGAAGGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: VSGITFKRHEKMVLREVSILPDR*VGKAWG
Trigger: TCCCCAGGCCTTCCCTACTCAACGGTCAGGAAGTAT...ACTCACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR TCA 90 bp ATTTTTGAGACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATTTCCTTAATACTTCCTaGCCGTTGAGTAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: IFETGACSVVQAIVQWFHFLNTS*PLSREG
Trigger: GCCTTCCCTACTCAACGGTCAGGAAGTATTAAGGAA...ATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGTCTCAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACTTCTGGCTCCTGAGCTaGGATTTTCTTAAACTCTTT +
Preference number: 4 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHFWLLS*DFLKLF
Trigger: AAAGAGTTTAAGAAAATCTCAGCTCAGGAGCCAGAA...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp CCATGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTTTCTGTTCTGGCTCCTaGGCTGAGATTTTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: PCTPTSLVGVCATAVDTGFCSGS*AEIFLN
Trigger: GTTTAAGAAAATCTCAGCTCAGGAGCCAGAACAGAA...ACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp CAAACTTTCAAAGATGGAAGCACTGGGACAGGGTTCCTCCTTGTGCGGAACTTCTGTGTGCTCCAGGAATaGCTAAGAGGCTTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: QTFKDGSTGTGFLLVRNFCVLQE*LRGFLS
Trigger: GGACAGAAAGCCTCTTAGTCATTCCTGGAGCACACA...GAAGTTCCGCACAAGGAGGAACCCTGTCCCAGTGCTTCCATCTTTGAAAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR TCA 90 bp TCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTGCTCCAGCTTCTGTaGGGAAGAGAGACCGTGACA +
Preference number: 4 (lower is better)
Translates to: SFWMKSLFHQAGGVHGLNLLQLL*GRETVT
Trigger: TGTCACGGTCTCTCTTCCTCACAGAAGCTGGAGCAA...GTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397679.5
ENST00000397682.7
CDS-3UTR TCA 90 bp ACGAGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTTTGCTCCAGCTTCTGTaGGGAAGAGAGACCGTGACA +
Preference number: 4 (lower is better)
Translates to: TRAQSLWNHLQEARKDGSLLQLL*GRETVT
Trigger: TGTCACGGTCTCTCTTCCTCACAGAAGCTGGAGCAA...AGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR GCA 90 bp TGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCGAAGGGCATCGTTACTaGTGCAAACAAGCACACGGC +
Preference number: 4 (lower is better)
Translates to: WMKSLFHQAGGVHGLNFTEGHRY*CKQAHG
Trigger: GCCGTGTGCTTGTTTGCAGCAGTAACGATGCCCTTC...GGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR GCA 90 bp AAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCTCGCAGGAAAGAACTaGTCAGCAGGAGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: KLFLDEIFISSGWWRPRPLAGKN*SAGAQA
Trigger: TGCTTGGGCTCCTGCTGAGCAGTTCTTTCCTGCGAG...AGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp TTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTCTCGCAGGAAAGAACTaGTCAGCAGGAGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: FLDEIFISSGWWRPRPQLLAGKN*SAGAQA
Trigger: TGCTTGGGCTCCTGCTGAGCAGTTCTTTCCTGCGAG...AAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp TTTAACGAGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGCTCGCAGGAAAGAACTaGTCAGCAGGAGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: FNESTESLESPSRGTKRWLAGKN*SAGAQA
Trigger: TGCTTGGGCTCCTGCTGAGCAGTTCTTTCCTGCGAG...CCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp CTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTGAGTGTGTCAGTCGGGTCACTTaGTCTGCTGCTGATGAGTCC +
Preference number: 4 (lower is better)
Translates to: LWNHLQEARKDGSERSECVSRVT*SAADES
Trigger: GGACTCATCAGCAGCAGAGCAAGTGACCCGACTGAC...ACACTCACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp AAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTGGGAGGAGGAATCTGTaGTATGAGTGGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: KLFLDEIFISSGWWRPRPGRRNL*YEWLLR
Trigger: CCTCAGCAGCCACTCATAGCACAGATTCCTCCTCCC...AGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp TCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTAGTGGGAGTCTGTaGCACAGCTGTGGACACAGG +
Preference number: 4 (lower is better)
Translates to: SFWMKSLFHQAGGVHGLNFSGSL*HSCGHR
Trigger: CCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAA...GTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp TTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTAGGAGGTGTTGTTCCTaGAAGGCCGATGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: FLDEIFISSGWWRPRPQLRRCCS*KADAEL
Trigger: CAGCTCTGCATCGGCCTTGCAGGAACAACACCTCCT...AAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp TTTAACGAGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGAGGAGGTGTTGTTCCTaGAAGGCCGATGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: FNESTESLESPSRGTKRWRRCCS*KADAEL
Trigger: CAGCTCTGCATCGGCCTTGCAGGAACAACACCTCCT...CCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR GCA 90 bp GTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTGAGTTTCGGTGTTCACACCTaGCCGTCCATGTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: VSGITFKRHEKMVLREVSFGVHT*PSMSAP
Trigger: TGGTGCTGACATGGACGGGCAGGTGTGAACACCGAA...ACTCACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp TCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTGAGTGTTGTTACTGCCAGTAGCTaGGCTGGGCCCTTCGGTGTT +
Preference number: 4 (lower is better)
Translates to: SGITFKRHEKMVLREVSVVTASS*AGPFGV
Trigger: AACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAAC...AACACTCACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp TTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTCATTCGGCGGGCTGGTaGCGTAGGATTTTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: FLDEIFISSGWWRPRPQLHSAGW*RRILFR
Trigger: CCGAAACAAAATCCTACGCCACCAGCCCGCCGAATG...AAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp TCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACCACCCAAACCTTCCGTaGTTTCCACCTCTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: SFWMKSLFHQAGGVHGLNHPNLP*FPPLQA
Trigger: AGCTTGCAGAGGTGGAAACCACGGAAGGTTTGGGTG...GTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp TTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTTCTGCAGGACCAACTaGTGCACCTGTGCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: FLDEIFISSGWWRPRPQLFCRTN*CTCAFC
Trigger: GCAGAACGCACAGGTGCACCAGTTGGTCCTGCAGAA...AAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp ATTTTTGAGACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATTGGTCTGCACTTGGTTaGGCATTAAACTCCACGTTG +
Preference number: 4 (lower is better)
Translates to: IFETGACSVVQAIVQWFHWSALG*ALNSTL
Trigger: CAACGTGGAGTTTAATGCCCAACCAAGTGCAGACCA...ATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGTCTCAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR TCA 90 bp CAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTTCTTGCTGTCACTTGTaGGAAGCCCTCCACATCTGC +
Preference number: 4 (lower is better)
Translates to: QSLWNHLQEARKDGSERSSCCHL*EALHIC
Trigger: GCAGATGTGGAGGGCTTCTCACAAGTGACAGCAAGA...ACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR GCA 90 bp TTAAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCGGGCATCGTTACTGCTaGAAACAAGCACACGGCCCT +
Preference number: 4 (lower is better)
Translates to: LNSFWMKSLFHQAGGVHGGHRYC*KQAHGP
Trigger: AGGGCCGTGTGCTTGTTTGCAGCAGTAACGATGCCC...GCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR GCA 90 bp TCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTGAGTGTTGTCAGTCGGGTCACTTaGTCTGCTGCTGATGAGTCC +
Preference number: 4 (lower is better)
Translates to: SGITFKRHEKMVLREVSVVSRVT*SAADES
Trigger: GGACTCATCAGCAGCAGAGCAAGTGACCCGACTGAC...AACACTCACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR GCA 90 bp ATGCTGGAAAGTCACCTTGAAAAGAGGAAATGGAGTCTGAGCTTTGGTTTGAGCGGGAGGAGGAATCTGTaGTATGAGTGGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: MLESHLEKRKWSLSFGLSGRRNL*YEWLLR
Trigger: CCTCAGCAGCCACTCATAGCACAGATTCCTCCTCCC...GCTCAAACCAAAGCTCAGACTCCATTTCCTCTTTTCAAGGTGACTTTCCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000491666.5
CDS-3UTR GCA 90 bp AACGAGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGCCCACATCAGAGATaGTTCCTTGCCAGATTCTCC +
Preference number: 4 (lower is better)
Translates to: NESTESLESPSRGTKRWFCPHQR*FLARFS
Trigger: GGAGAATCTGGCAAGGAAGCATCTCTGATGTGGGCA...GAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR GCA 90 bp TCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTGAGTGTTTTCGGTGTTCACACCTaGCCGTCCATGTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: SGITFKRHEKMVLREVSVFGVHT*PSMSAP
Trigger: TGGTGCTGACATGGACGGGCAGGTGTGAACACCGAA...AACACTCACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp TTAAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCGCGCATTCGGCGGGCTaGTGGCGTAGGATTTTGTTT +
Preference number: 4 (lower is better)
Translates to: LNSFWMKSLFHQAGGVHGAHSAG*WRRILF
Trigger: AAACAAAATCCTACGCCACCAGCCCGCCGAATGCGC...GCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp TCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTATTTCATCAGGCTaGTGGCGTCCACGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: SFWMKSLFHQAGGVHGLNFISSG*WRPRPQ
Trigger: TTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAA...GTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp TGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTTTATTTCATCAGGCTaGTGGCGTCCACGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: WMKSLFHQAGGVHGLNFTFISSG*WRPRPQ
Trigger: TTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAA...GGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp TCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTCCTTAATACTTCCTaGCCGTTGAGTAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SFWMKSLFHQAGGVHGLNFLNTS*PLSREG
Trigger: GCCTTCCCTACTCAACGGTCAGGAAGTATTAAGGAA...GTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp TGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTTCCTTAATACTTCCTaGCCGTTGAGTAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: WMKSLFHQAGGVHGLNFTFLNTS*PLSREG
Trigger: GCCTTCCCTACTCAACGGTCAGGAAGTATTAAGGAA...GGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp ACGAGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTTTCCTTAATACTTCCTaGCCGTTGAGTAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: TRAQSLWNHLQEARKDGSFLNTS*PLSREG
Trigger: GCCTTCCCTACTCAACGGTCAGGAAGTATTAAGGAA...AGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR TCA 90 bp TTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTGTGTGCTCCAGGAATaGCTAAGAGGCTTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: FLDEIFISSGWWRPRPQLCVLQE*LRGFLS
Trigger: GGACAGAAAGCCTCTTAGTCATTCCTGGAGCACACA...AAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397679.5
ENST00000397682.7
CDS-3UTR CCA 90 bp TCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTGAGTGTTAATCTGTGCTATGAGTaGCTGCTGAGGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SGITFKRHEKMVLREVSVNLCYE*LLRELL
Trigger: CAGCAGCTCCCTCAGCAGCCACTCATAGCACAGATT...AACACTCACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CCA 90 bp TTAAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCATTTCATCAGGCTGGTaGCGTCCACGGCCTCAACTT +
Preference number: 4 (lower is better)
Translates to: LNSFWMKSLFHQAGGVHGISSGW*RPRPQL
Trigger: AAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAAT...GCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp CTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTGAGTGTCAAAGATGGAAGCACTaGGACAGGGTTCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LWNHLQEARKDGSERSECQRWKH*DRVPPC
Trigger: ACAAGGAGGAACCCTGTCCCAGTGCTTCCATCTTTG...ACACTCACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000491666.5
CDS-3UTR CCA 90 bp ACGAGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTAGAGCACAGAGTCTCTaGAATCACCTTCAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: TRAQSLWNHLQEARKDGSRAQSL*NHLQEA
Trigger: TGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCT...AGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR TCA 90 bp ATTTTTGAGACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATAATAAAGGGGTTAGCTaGAGGAATACTCCACAGTTA +
Preference number: 4 (lower is better)
Translates to: IFETGACSVVQAIVQWFHNKGVS*RNTPQL
Trigger: TAACTGTGGAGTATTCCTTCAGCTAACCCCTTTATT...ATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGTCTCAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR CCA 90 bp GAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGCAAACTTTCAAAGATaGAAGCACTGGGACAGGGTT +
Preference number: 4 (lower is better)
Translates to: EHRVSGITFKRHEKMVLRANFQR*KHWDRV
Trigger: AACCCTGTCCCAGTGCTTCCATCTTTGAAAGTTTGC...TCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000491666.5
CDS-3UTR TCA 90 bp TGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTTCTGTTCTGGCTCCTaGGCTGAGATTTTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: WMKSLFHQAGGVHGLNFTFCSGS*AEIFLN
Trigger: GTTTAAGAAAATCTCAGCTCAGGAGCCAGAACAGAA...GGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR TCA 90 bp TTTGAGCTTTTAACGAGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAGCTGGAAAGTCACCTTaGAAAGAGGAAATGGAGTCT +
Preference number: 4 (lower is better)
Translates to: FELLTRAQSLWNHLQEARAGKSP*KEEMES
Trigger: AGACTCCATTTCCTCTTTTCAAGGTGACTTTCCAGC...TCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGTTAAAAGCTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000491666.5
CDS-3UTR CCA 90 bp AAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCCTCAGTTCTGTAAATaGCCCATGTCCATCAGTATC +
Preference number: 4 (lower is better)
Translates to: KLFLDEIFISSGWWRPRPPQFCK*PMSISI
Trigger: GATACTGATGGACATGGGCCATTTACAGAACTGAGG...AGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR TCA 90 bp AAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTTTCTGGCTCCTGAGCTaGGATTTTCTTAAACTCTTT +
Preference number: 4 (lower is better)
Translates to: KLFLDEIFISSGWWRPRPFWLLS*DFLKLF
Trigger: AAAGAGTTTAAGAAAATCTCAGCTCAGGAGCCAGAA...AGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR GCA 90 bp ACGAGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTATAGAAAGAAAGAAATaGCATGCTGGAAAGTCACCT +
Preference number: 4 (lower is better)
Translates to: TRAQSLWNHLQEARKDGSIERKK*HAGKSP
Trigger: AGGTGACTTTCCAGCATGGCATTTCTTTCTTTCTAT...AGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000491666.5
CDS-3UTR CCA 90 bp TCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACGTTCACACTTCCATGTaGCTAAAGCTATTGATCTTT +
Preference number: 4 (lower is better)
Translates to: SFWMKSLFHQAGGVHGLNVHTSM*LKLLIF
Trigger: AAAGATCAATAGCTTTAGCCACATGGAAGTGTGAAC...GTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CCA 90 bp GTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTGAGTATGGAGTCTGAGCTTTaGTTTGAGCTTTTAACGAGA +
Preference number: 4 (lower is better)
Translates to: VSGITFKRHEKMVLREVSMESEL*FELLTR
Trigger: TCTCGTTAAAAGCTCAAACCAAAGCTCAGACTCCAT...ACTCACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000491666.5
CDS-3UTR GCA 90 bp CAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTATAGAAAGAAAGAAATaGCATGCTGGAAAGTCACCT +
Preference number: 4 (lower is better)
Translates to: QSLWNHLQEARKDGSERSIERKK*HAGKSP
Trigger: AGGTGACTTTCCAGCATGGCATTTCTTTCTTTCTAT...ACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000491666.5
CDS-3UTR CCA 90 bp TTAAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCGTTCACACTTCCATGTaGCTAAAGCTATTGATCTTT +
Preference number: 4 (lower is better)
Translates to: LNSFWMKSLFHQAGGVHGVHTSM*LKLLIF
Trigger: AAAGATCAATAGCTTTAGCCACATGGAAGTGTGAAC...GCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS CCA 90 bp GTGGTGGTGGTGGTGCACGGCAGGCAGCCTTGGCCTGGCAGCTCGTaGGACCCTCGGGGGCACATGTGGCGGGTCCTGCAGGGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: VVVVVHGRQPWPGSS*DPRGHMWRVLQGWG
Trigger: CCCCCAGCCCTGCAGGACCCGCCACATGTGCCCCCGAGGGTCCCACGAGCTGCCAGGCCAAGGCTGCCTGCCGTGCACCACCACCACCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
ENST00000397683.5
ENST00000417060.5
ENST00000472607.1
CDS GCA 90 bp GCAGCCCCAGGTGGCCACACAGCATGGTGGTGGTGGTGGTGGTGGTaGACGGCAGGCAGCCTTGGCCTGGCAGCTCGTGGGACCCTCGGG +
Preference number: 5 (lower is better)
Translates to: AAPGGHTAWWWWWWW*TAGSLGLAARGTLG
Trigger: CCCGAGGGTCCCACGAGCTGCCAGGCCAAGGCTGCCTGCCGTGCACCACCACCACCACCACCACCATGCTGTGTGGCCACCTGGGGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
ENST00000397683.5
ENST00000417060.5
ENST00000472607.1
CDS CCA 90 bp CACAGCATGGTGGTGGTGGTGGTGGTGGTGCACGGCAGGCAGCCTTaGCCTGGCAGCTCGTGGGACCCTCGGGGGCACATGTGGCGGGTC +
Preference number: 5 (lower is better)
Translates to: HSMVVVVVVVHGRQP*PGSSWDPRGHMWRV
Trigger: GACCCGCCACATGTGCCCCCGAGGGTCCCACGAGCTGCCAGGCCAAGGCTGCCTGCCGTGCACCACCACCACCACCACCACCATGCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
ENST00000397683.5
ENST00000417060.5
ENST00000472607.1
CDS TCA 90 bp AGGCGGTTCGCGGGCTTTCTGACCGCATTCGGCCGAGTTCTTCTCTaGAGACCCAGGACCCCCGGCCGAGGGGGCGCATTCGGCGGGCTG +
Preference number: 5 (lower is better)
Translates to: RRFAGFLTAFGRVLL*RPRTPGRGGAFGGL
Trigger: CAGCCCGCCGAATGCGCCCCCTCGGCCGGGGGTCCTGGGTCTTCAGAGAAGAACTCGGCCGAATGCGGTCAGAAAGCCCGCGAACCGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS GCA 90 bp CTCCAGGCCTGGGCCCGAGAGAGCTCGTCCAGGAGGTGTTGTTCCTaGAAGGCCGATGCAGAGCTGCTGCACACGGGGACGGGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: LQAWARESSSRRCCS*KADAELLHTGTGSP
Trigger: GGGGCTCCCCGTCCCCGTGTGCAGCAGCTCTGCATCGGCCTTGCAGGAACAACACCTCCTGGACGAGCTCTCTCGGGCCCAGGCCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
ENST00000397683.5
CDS CCA 90 bp ACAGTGGCAGCCCCAGGTGGCCACACAGCATGGTGGTGGTGGTGGTaGTGGTGCACGGCAGGCAGCCTTGGCCTGGCAGCTCGTGGGACC +
Preference number: 5 (lower is better)
Translates to: TVAAPGGHTAWWWWW*WCTAGSLGLAARGT
Trigger: GGTCCCACGAGCTGCCAGGCCAAGGCTGCCTGCCGTGCACCACCACCACCACCACCACCATGCTGTGTGGCCACCTGGGGCTGCCACTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
ENST00000397683.5
ENST00000417060.5
ENST00000472607.1
CDS CCA 90 bp AGGACAGTGGCAGCCCCAGGTGGCCACACAGCATGGTGGTGGTGGTaGTGGTGGTGCACGGCAGGCAGCCTTGGCCTGGCAGCTCGTGGG +
Preference number: 5 (lower is better)
Translates to: RTVAAPGGHTAWWWW*WWCTAGSLGLAARG
Trigger: CCCACGAGCTGCCAGGCCAAGGCTGCCTGCCGTGCACCACCACCACCACCACCACCATGCTGTGTGGCCACCTGGGGCTGCCACTGTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
ENST00000397683.5
ENST00000417060.5
ENST00000472607.1
CDS CCA 90 bp GGCTGGAGGACAGTGGCAGCCCCAGGTGGCCACACAGCATGGTGGTaGTGGTGGTGGTGGTGCACGGCAGGCAGCCTTGGCCTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: GWRTVAAPGGHTAWW*WWWWCTAGSLGLAA
Trigger: AGCTGCCAGGCCAAGGCTGCCTGCCGTGCACCACCACCACCACCACCACCATGCTGTGTGGCCACCTGGGGCTGCCACTGTCCTCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
ENST00000397683.5
ENST00000417060.5
ENST00000472607.1
CDS CCA 90 bp GATAGCCACACCCTCCCTGGACTGCAGTGCCCCAGAAGCCAGCGCTaGGCGCCGCGTGACAGTTGCCAGGCTGCCAGACACAGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: DSHTLPGLQCPRSQR*APRDSCQAARHREA
Trigger: GGCCTCCCTGTGTCTGGCAGCCTGGCAACTGTCACGCGGCGCCCAGCGCTGGCTTCTGGGGCACTGCAGTCCAGGGAGGGTGTGGCTATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR CAA 90 bp GTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGCTCCCTTGCCCTGTCCGGGTGGTaGCTGAGCACCGTTCGGCGC +
Preference number: 5 (lower is better)
Translates to: VHTRVATPGGGRVSPCSLALSGW*LSTVRR
Trigger: GCGCCGAACGGTGCTCAGCAACCACCCGGACAGGGC...AAGGGAGCAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397680.5
CDS-3UTR CAA 90 bp CGGGTGGTGGCAGGGTCTCTCCCTGCTCCCTTCCATAGTCCCGCCACAGCCCACCCCTGGGAGGGGCTGTaGCCCTGGTGGGGTTCACAG +
Preference number: 5 (lower is better)
Translates to: RVVAGSLPAPFHSPATAHPWEGL*PWWGSQ
Trigger: CTGTGAACCCCACCAGGGCAACAGCCCCTCCCAGGG...GTGGGCTGTGGCGGGACTATGGAAGGGAGCAGGGAGAGACCCTGCCACCACCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS GCA 90 bp CGCAGGAAAGAACTGCTCAGCAGGAGCCCAAGCACCGGTGTTGCCTaGAGGGCGGGCCTTACCTCCTGGAGACCAGCGCGCGCGCCAGCT +
Preference number: 5 (lower is better)
Translates to: RRKELLSRSPSTGVA*RAGLTSWRPARAPA
Trigger: AGCTGGCGCGCGCGCTGGTCTCCAGGAGGTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGCTCCTGCTGAGCAGTTCTTTCCTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397680.5
CDS CCA 90 bp TGGAGGACAGTGGCAGCCCCAGGTGGCCACACAGCATGGTGGTGGTaGTGGTGGTGGTGCACGGCAGGCAGCCTTGGCCTGGCAGCTCGT +
Preference number: 5 (lower is better)
Translates to: WRTVAAPGGHTAWWW*WWWCTAGSLGLAAR
Trigger: ACGAGCTGCCAGGCCAAGGCTGCCTGCCGTGCACCACCACCACCACCACCACCATGCTGTGTGGCCACCTGGGGCTGCCACTGTCCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
ENST00000397683.5
ENST00000417060.5
ENST00000472607.1
CDS-3UTR CAA 90 bp GTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGCTCCCTTCCCTGGGAGGGGCTGTaGCCCTGGTGGGGTTCACAG +
Preference number: 5 (lower is better)
Translates to: VHTRVATPGGGRVSPCSLPWEGL*PWWGSQ
Trigger: CTGTGAACCCCACCAGGGCAACAGCCCCTCCCAGGG...AAGGGAGCAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS GCA 90 bp TACTCGCAGGAAAGAACTGCTCAGCAGGAGCCCAAGCACCGGTGTTaGCTGCAGGGCGGGCCTTACCTCCTGGAGACCAGCGCGCGCGCC +
Preference number: 5 (lower is better)
Translates to: YSQERTAQQEPKHRC*LQGGPYLLETSARA
Trigger: GGCGCGCGCGCTGGTCTCCAGGAGGTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGCTCCTGCTGAGCAGTTCTTTCCTGCGAGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397680.5
CDS GCA 90 bp CGCAGGAAAGAACTGCTCAGCAGGAGCCCAAGCACCGGTGTTGCCTaGAGGGCGGGCCTTACCTCCTGGAGACCAGCCTTGGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RRKELLSRSPSTGVA*RAGLTSWRPALGLG
Trigger: CCCCAGCCCCAAGGCTGGTCTCCAGGAGGTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGCTCCTGCTGAGCAGTTCTTTCCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445935.5
CDS-3UTR CAA 90 bp TCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGACGAGGGCTCCTCTGCTaGGCCCGCTCCAGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: SGWWRPRPQLYLRDGRGGRGLLC*ARSRPG
Trigger: CCCAGGCCTGGAGCGGGCCAAGCAGAGGAGCCCTCG...TCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CAA 90 bp CGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGGCTGGGGGCAGGGCCTaGAGCATCCAGTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: RWALRCSHLPVHVSTRWLAGGRA*SIQFCR
Trigger: CCTGCAGAACTGGATGCTCAAGGCCCTGCCCCCAGC...CAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS TCA 90 bp TTCGCTCCAGTTAGTTTCCCAAGTTCCACCTACGCGCGCGCCAGCTaGGAAAACGCCCACCCCGGCGGTCCCGCCACAGGTCACAGGCGG +
Preference number: 5 (lower is better)
Translates to: FAPVSFPSSTYARAS*ENAHPGGPATGHRR
Trigger: CCGCCTGTGACCTGTGGCGGGACCGCCGGGGTGGGCGTTTTCTCAGCTGGCGCGCGCGTAGGTGGAACTTGGGAAACTAACTGGAGCGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS TCA 90 bp GCCAGCCTGGGCCAGGTACAGGCGCCTCTCCGGGCAGGATGGCCATaGCTGGAAGACCCTTCCAGGGTTATGTGCATGAGGGTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: ASLGQVQAPLRAGWP*LEDPSRVMCMRVAS
Trigger: GGAGGCCACCCTCATGCACATAACCCTGGAAGGGTCTTCCAGTCATGGCCATCCTGCCCGGAGAGGCGCCTGTACCTGGCCCAGGCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
ENST00000397683.5
ENST00000445935.5
ENST00000475776.1
CDS-3UTR CAA 90 bp GGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGGGCCCTGTCCGGGTGGTaGCTGAGCACCGTTCGGCGC +
Preference number: 5 (lower is better)
Translates to: GLNFTSVMEEGDLRLPGGALSGW*LSTVRR
Trigger: GCGCCGAACGGTGCTCAGCAACCACCCGGACAGGGC...CCCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CAA 90 bp GCCTGCAGTCCACACTCGCGTAGCCACTCCGGGTGGTGGCAGGGTCTCTCCCTGCTCGTCCAGGAGGTGTaGTTCCCGGAGTCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: ACSPHSRSHSGWWQGLSLLVQEV*FPESLQ
Trigger: CTGCAGAGACTCCGGGAACAACACCTCCTGGACGAG...CAGGGAGAGACCCTGCCACCACCCGGAGTGGCTACGCGAGTGTGGACTGCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291691.12
CDS-3UTR CAA 90 bp GAAGTGAGTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCGAGGGCTCCTCTGCTaGGCCCGCTCCAGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: EVSVTASSCAGPFGVHTCRGLLC*ARSRPG
Trigger: CCCAGGCCTGGAGCGGGCCAAGCAGAGGAGCCCTCG...GCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACACTCACTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CAA 90 bp TCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGAGCCCAAGCACCGGTGTaGCCTGCAGGGCGGGCCTTA +
Preference number: 5 (lower is better)
Translates to: SGWWRPRPQLYLRDGRGGAQAPV*PAGRAL
Trigger: TAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGC...TCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CAA 90 bp ACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCAGAGCTCACGAGGGCTCCTCTGCTaGGCCCGCTCCAGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: TGACSVVQAIVQWFHQSSRGLLC*ARSRPG
Trigger: CCCAGGCCTGGAGCGGGCCAAGCAGAGGAGCCCTCG...TGAGCTCTGATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS GCA 90 bp TACTCGCAGGAAAGAACTGCTCAGCAGGAGCCCAAGCACCGGTGTTaGCTGCAGGGCGGGCCTTACCTCCTGGAGACCAGCCTTGGGGCT +
Preference number: 5 (lower is better)
Translates to: YSQERTAQQEPKHRC*LQGGPYLLETSLGA
Trigger: AGCCCCAAGGCTGGTCTCCAGGAGGTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGCTCCTGCTGAGCAGTTCTTTCCTGCGAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445935.5
CDS-3UTR CAA 90 bp GAAGTGAGTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCGCCCAAGCACCGGTGTaGCCTGCAGGGCGGGCCTTA +
Preference number: 5 (lower is better)
Translates to: EVSVTASSCAGPFGVHTCAQAPV*PAGRAL
Trigger: TAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGC...GCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACACTCACTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CAA 90 bp GCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACTCGTCCAGGAGGTGTaGTTCCCGGAGTCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: ASSCAGPFGVHTCPSMSALVQEV*FPESLQ
Trigger: CTGCAGAGACTCCGGGAACAACACCTCCTGGACGAG...TGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CAA 90 bp CCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCCTGGCTCGTCCAGGAGGTGTaGTTCCCGGAGTCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: PFGVHTCPSMSAPGGCPWLVQEV*FPESLQ
Trigger: CTGCAGAGACTCCGGGAACAACACCTCCTGGACGAG...CCAGGGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CAA 90 bp GGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGGCTGGGGGCAGGGCCTaGAGCATCCAGTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GGVHGLNFTSVMEEGDLRAGGRA*SIQFCR
Trigger: CCTGCAGAACTGGATGCTCAAGGCCCTGCCCCCAGC...CCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CAA 90 bp CGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCGCTGGGGGCAGGGCCTaGAGCATCCAGTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: RPRPQLYLRDGRGGSEAPAGGRA*SIQFCR
Trigger: CCTGCAGAACTGGATGCTCAAGGCCCTGCCCCCAGC...GGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CAA 90 bp CACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCCCGCACGGCAGGCAGCCTaGGCCTGGCAGCTCGTGGGA +
Preference number: 5 (lower is better)
Translates to: HPYFFSGSLCHSCGHRCPARQAA*AWQLVG
Trigger: TCCCACGAGCTGCCAGGCCAAGGCTGCCTGCCGTGC...GGGACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS TCA 90 bp TCCCCGACCTGGTGCCTTAAGGCTGAGCAGCTATCTCTGCTACAGTaGGCTCAGCCAGGTTCGCTCAGAGGGTGCAGGGCCTACCCGGAG +
Preference number: 5 (lower is better)
Translates to: SPTWCLKAEQLSLLQ*AQPGSLRGCRAYPE
Trigger: CTCCGGGTAGGCCCTGCACCCTCTGAGCGAACCTGGCTGAGCTCACTGTAGCAGAGATAGCTGCTCAGCCTTAAGGCACCAGGTCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475776.1
CDS GCA 90 bp CGCAGGAAAGAACTGCTCAGCAGGAGCCCAAGCACCGGTGTTGCCTaGAGGGCGGGCCTTACCTCCTGGAGACCAGCCACACAGAAGACT +
Preference number: 5 (lower is better)
Translates to: RRKELLSRSPSTGVA*RAGLTSWRPATQKT
Trigger: AGTCTTCTGTGTGGCTGGTCTCCAGGAGGTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGCTCCTGCTGAGCAGTTCTTTCCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397682.7
ENST00000475776.1
CDS GCA 90 bp TCCCGGAGTCTCTGCAGAAGGTCCCTCCTTCTCTTCAGAGCAGTCTaGAGGGCATCGTCCGGCCGGTCCTCATTTCCTGGCTCGAGGTGG +
Preference number: 5 (lower is better)
Translates to: SRSLCRRSLLLFRAV*RASSGRSSFPGSRW
Trigger: CCACCTCGAGCCAGGAAATGAGGACCGGCCGGACGATGCCCTGCAGACTGCTCTGAAGAGAAGGAGGGACCTTCTGCAGAGACTCCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
ENST00000397683.5
ENST00000417060.5
ENST00000445935.5
ENST00000491666.5
CDS GCA 90 bp GGGCAGAACCCTCAGACCTGGGGGAAGGGCAGTCGTGACCCCCTATaGACCACCAGCCTCAGGACCCAGTCCAGAAGAACCTGTGTGTCA +
Preference number: 5 (lower is better)
Translates to: GQNPQTWGKGSRDPL*TTSLRTQSRRTCVS
Trigger: TGACACACAGGTTCTTCTGGACTGGGTCCTGAGGCTGGTGGTGCATAGGGGGTCACGACTGCCCTTCCCCCAGGTCTGAGGGTTCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS GCA 90 bp TACTCGCAGGAAAGAACTGCTCAGCAGGAGCCCAAGCACCGGTGTTaGCTGCAGGGCGGGCCTTACCTCCTGGAGACCAGCCTGAGGGAA +
Preference number: 5 (lower is better)
Translates to: YSQERTAQQEPKHRC*LQGGPYLLETSLRE
Trigger: TTCCCTCAGGCTGGTCTCCAGGAGGTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGCTCCTGCTGAGCAGTTCTTTCCTGCGAGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS GCA 90 bp ACCCGGAGTCTCTGCAGAAGGTCCCTCCTTCTCTTCAGAGCAGTCTaGAGGGCATCGTCCGGCCGGTCCTCATTTCCTGGCTCGAGGTGG +
Preference number: 5 (lower is better)
Translates to: TRSLCRRSLLLFRAV*RASSGRSSFPGSRW
Trigger: CCACCTCGAGCCAGGAAATGAGGACCGGCCGGACGATGCCCTGCAGACTGCTCTGAAGAGAAGGAGGGACCTTCTGCAGAGACTCCGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475776.1
CDS GCA 90 bp CTCAGCCAGGTTCGCTCAGAGGGTGCAGGGCCTACCCGGAGTCTCTaGAGAAGGTCCCTCCTTCTCTTCAGAGCAGTCTGCAGGGCATCG +
Preference number: 5 (lower is better)
Translates to: LSQVRSEGAGPTRSL*RRSLLLFRAVCRAS
Trigger: CGATGCCCTGCAGACTGCTCTGAAGAGAAGGAGGGACCTTCTGCAGAGACTCCGGGTAGGCCCTGCACCCTCTGAGCGAACCTGGCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475776.1
CDS CCA 90 bp TCAGCGTCAGTCGGGTCACTTGCTCTGCTGCTGATGAGTCCAGCATaGTGGGAGCTGCAGGAGACGACTGTAGGGGCAGGGGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: SASVGSLALLLMSPA*WELQETTVGAGEAT
Trigger: TGTGGCCTCCCCTGCCCCTACAGTCGTCTCCTGCAGCTCCCACCATGCTGGACTCATCAGCAGCAGAGCAAGTGACCCGACTGACGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
ENST00000397683.5
ENST00000417060.5
ENST00000445935.5
ENST00000475776.1
ENST00000491666.5
CDS-3UTR CAA 90 bp ACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCAGAGCTCAGCCCAAGCACCGGTGTaGCCTGCAGGGCGGGCCTTA +
Preference number: 5 (lower is better)
Translates to: TGACSVVQAIVQWFHQSSAQAPV*PAGRAL
Trigger: TAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGC...TGAGCTCTGATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS GCA 90 bp TACTCGCAGGAAAGAACTGCTCAGCAGGAGCCCAAGCACCGGTGTTaGCTGCAGGGCGGGCCTTACCTCCTGGAGACCAGCCACACAGAA +
Preference number: 5 (lower is better)
Translates to: YSQERTAQQEPKHRC*LQGGPYLLETSHTE
Trigger: TTCTGTGTGGCTGGTCTCCAGGAGGTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGCTCCTGCTGAGCAGTTCTTTCCTGCGAGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397682.7
ENST00000475776.1
CDS GCA 90 bp CGCAGGAAAGAACTGCTCAGCAGGAGCCCAAGCACCGGTGTTGCCTaGAGGGCGGGCCTTACCTCCTGGAGACCAGCCAGAGTACTCTAT +
Preference number: 5 (lower is better)
Translates to: RRKELLSRSPSTGVA*RAGLTSWRPARVLY
Trigger: ATAGAGTACTCTGGCTGGTCTCCAGGAGGTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGCTCCTGCTGAGCAGTTCTTTCCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS GCA 90 bp TACTCGCAGGAAAGAACTGCTCAGCAGGAGCCCAAGCACCGGTGTTaGCTGCAGGGCGGGCCTTACCTCCTGGAGACCAGCCAGAGTACT +
Preference number: 5 (lower is better)
Translates to: YSQERTAQQEPKHRC*LQGGPYLLETSQST
Trigger: AGTACTCTGGCTGGTCTCCAGGAGGTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGCTCCTGCTGAGCAGTTCTTTCCTGCGAGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR CAA 90 bp ATTTTTGAGACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCGAGGGCTCCTCTGCTaGGCCCGCTCCAGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: IFETGACSVVQAIVQWFHRGLLC*ARSRPG
Trigger: CCCAGGCCTGGAGCGGGCCAAGCAGAGGAGCCCTCG...ATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGTCTCAAAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CAA 90 bp ACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCAGAGCTCAGCTGGGGGCAGGGCCTaGAGCATCCAGTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: TGACSVVQAIVQWFHQSSAGGRA*SIQFCR
Trigger: CCTGCAGAACTGGATGCTCAAGGCCCTGCCCCCAGC...TGAGCTCTGATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CAA 90 bp TGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGTCGGGATATGTCCCACCTaGGGGCTGGGGGCACTGGGC +
Preference number: 5 (lower is better)
Translates to: CTPTSLVGVCATAVDTGVGICPT*GLGALG
Trigger: GCCCAGTGCCCCCAGCCCCAAGGTGGGACATATCCC...GACACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR CAA 90 bp CGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCCTCGTCCAGGAGGTGTaGTTCCTGCAAGGCCGATGC +
Preference number: 5 (lower is better)
Translates to: RPRPQLYLRDGRGGSEAPLVQEV*FLQGRC
Trigger: GCATCGGCCTTGCAGGAACAACACCTCCTGGACGAG...GGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CAA 90 bp TGGGCCCTTCGGTGTTCACACCTGCCCGTCCATGTCAGCACCAGGTGGCTGTCCGGACAGGGTTCCTCCTaGTGCGGAACTTCAGGAATG +
Preference number: 5 (lower is better)
Translates to: WALRCSHLPVHVSTRWLSGQGSS*CGTSGM
Trigger: CATTCCTGAAGTTCCGCACAAGGAGGAACCCTGTCC...GGACAGCCACCTGGTGCTGACATGGACGGGCAGGTGTGAACACCGAAGGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000491666.5
CDS TCA 90 bp GCGAGATTCCAGGGCTTCCTGAGGGCGCGTTTAAGTTGCAGTTGCTaGGGAGGCTGCAAGGTGAGCTTGCGTCAGCGAGGAGCCACTCCA +
Preference number: 5 (lower is better)
Translates to: ARFQGFLRARLSCSC*GGCKVSLRQRGATP
Trigger: TGGAGTGGCTCCTCGCTGACGCAAGCTCACCTTGCAGCCTCCTCAGCAACTGCAACTTAAACGCGCCCTCAGGAAGCCCTGGAATCTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS TCA 90 bp CTCAGGTCCCCCTTCCACGTTCTGCCGTTCTTGCTCCAGCTTCTGTaGGGAAGAGAGACCGTGACAGAGACGGTGGCTCCACGCAAAGGC +
Preference number: 5 (lower is better)
Translates to: LRSPFHVLPFLLQLL*GRETVTETVAPRKG
Trigger: GCCTTTGCGTGGAGCCACCGTCTCTGTCACGGTCTCTCTTCCTCACAGAAGCTGGAGCAAGAACGGCAGAACGTGGAAGGGGGACCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397682.7
ENST00000397683.5
CDS GCA 90 bp GTCAGCGAGGAGCCACTCCAGCACGCTCGGGAAGGGCATCGTTACTaGTGCAAACAAGCACACGGCCCTCCACGACGAACCTTTTGCAAG +
Preference number: 5 (lower is better)
Translates to: VSEEPLQHAREGHRY*CKQAHGPPRRTFCK
Trigger: CTTGCAAAAGGTTCGTCGTGGAGGGCCGTGTGCTTGTTTGCAGCAGTAACGATGCCCTTCCCGAGCGTGCTGGAGTGGCTCCTCGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS CCA 90 bp CACGTTGATGAGTTAGTCAATCCCACTAGCAGGCAGACTGACATGTaGGGGATGTCAGCAGCAGGGGCCCAGACCTGTGGACCCGAGGGG +
Preference number: 5 (lower is better)
Translates to: HVDELVNPTSRQTDM*GMSAAGAQTCGPEG
Trigger: CCCCTCGGGTCCACAGGTCTGGGCCCCTGCTGCTGACATCCCCCACATGTCAGTCTGCCTGCTAGTGGGATTGACTAACTCATCAACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR CAA 90 bp CGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCGGCAGGGAGTCAAGTTaGCAGGAAGCTTCGCAGAGG +
Preference number: 5 (lower is better)
Translates to: RPRPQLYLRDGRGGSEAPGRESS*QEASQR
Trigger: CCTCTGCGAAGCTTCCTGCAAACTTGACTCCCTGCC...GGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR CAA 90 bp GTGTTACTGCCAGTAGCTGCGCTGGGCCCTTCGGTGTTCACACCTGCCCGTCCAGGACAGGGTTCCTCCTaGTGCGGAACTTCAGGAATG +
Preference number: 5 (lower is better)
Translates to: VLLPVAALGPSVFTPARPGQGSS*CGTSGM
Trigger: CATTCCTGAAGTTCCGCACAAGGAGGAACCCTGTCC...TGGACGGGCAGGTGTGAACACCGAAGGGCCCAGCGCAGCTACTGGCAGTAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000491666.5
CDS TCA 90 bp CCGTGGTTTCCACCTCTGCAAGCTTATGTTCCGCTGAGCTCAAGCTaGGGGACGACGACCTCATGCGACGTCAGTTTCCCCCTGGGACCA +
Preference number: 5 (lower is better)
Translates to: PWFPPLQAYVPLSSS*GTTTSCDVSFPLGP
Trigger: TGGTCCCAGGGGGAAACTGACGTCGCATGAGGTCGTCGTCCCTCAGCTTGAGCTCAGCGGAACATAAGCTTGCAGAGGTGGAAACCACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS TCA 90 bp ACGTTCTGCCGTTCTTGCTCCAGCTTCTGTGAGGAAGAGAGACCGTaGCAGAGACGGTGGCTCCACGCAAAGGCCCTGTGTGCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: TFCRSCSSFCEEERP*QRRWLHAKALCAPG
Trigger: TCCTGGAGCACACAGGGCCTTTGCGTGGAGCCACCGTCTCTGTCACGGTCTCTCTTCCTCACAGAAGCTGGAGCAAGAACGGCAGAACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397682.7
ENST00000397683.5
CDS GCA 90 bp CCTAATACTCCCCGACCTGGTGCCTTAAGGCTGAGCAGCTATCTCTaGTACAGTGAGCTCAGCCAGGTTCGCTCAGAGGGTGCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: PNTPRPGALRLSSYL*YSELSQVRSEGAGP
Trigger: AGGCCCTGCACCCTCTGAGCGAACCTGGCTGAGCTCACTGTAGCAGAGATAGCTGCTCAGCCTTAAGGCACCAGGTCGGGGAGTATTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475776.1
CDS GCA 90 bp CCCACCTCCCCTGCATCTCTGCCACTCGGATGCATCTTTGGTGAGTaGCGTGGGAGCAAACCTCCAGGCATCCCAGAATTTCAGGTCCTC +
Preference number: 5 (lower is better)
Translates to: PTSPASLPLGCIFGE*RGSKPPGIPEFQVL
Trigger: GAGGACCTGAAATTCTGGGATGCCTGGAGGTTTGCTCCCACGGCACTCACCAAAGATGCATCCGAGTGGCAGAGATGCAGGGGAGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475776.1
CDS-3UTR CAA 90 bp GAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGCCCTGTCCGGGTGGTaGCTGAGCACCGTTCGGCGC +
Preference number: 5 (lower is better)
Translates to: EIFISSGWWRPRPQLYLRALSGW*LSTVRR
Trigger: GCGCCGAACGGTGCTCAGCAACCACCCGGACAGGGC...ACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CAA 90 bp CGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCTGGTGGCGTAGGATTTaGTTTCGGGTTCCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: RPRPQLYLRDGRGGSEAPWWRRI*FRVPRV
Trigger: GACCCTGGGAACCCGAAACAAAATCCTACGCCACCA...GGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CAA 90 bp CCATGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTGGCTGCAAGGTGAGCTaGCGTCAGCGAGGAGCCACT +
Preference number: 5 (lower is better)
Translates to: PCTPTSLVGVCATAVDTGGCKVS*RQRGAT
Trigger: AGTGGCTCCTCGCTGACGCAAGCTCACCTTGCAGCC...ACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR CAA 90 bp ATTTTTGAGACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATGCCCAAGCACCGGTGTaGCCTGCAGGGCGGGCCTTA +
Preference number: 5 (lower is better)
Translates to: IFETGACSVVQAIVQWFHAQAPV*PAGRAL
Trigger: TAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGC...ATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGTCTCAAAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CAA 90 bp GAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGCACGGCAGGCAGCCTaGGCCTGGCAGCTCGTGGGA +
Preference number: 5 (lower is better)
Translates to: EIFISSGWWRPRPQLYLRARQAA*AWQLVG
Trigger: TCCCACGAGCTGCCAGGCCAAGGCTGCCTGCCGTGC...ACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CAA 90 bp ACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATCAGAGCTCACTCGTCCAGGAGGTGTaGTTCCTGCAAGGCCGATGC +
Preference number: 5 (lower is better)
Translates to: TGACSVVQAIVQWFHQSSLVQEV*FLQGRC
Trigger: GCATCGGCCTTGCAGGAACAACACCTCCTGGACGAG...TGAGCTCTGATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CAA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACGAGGGCGCGTTTAAGTaGCAGTTGCTGAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHEGAFK*QLLRRL
Trigger: CAGCCTCCTCAGCAACTGCAACTTAAACGCGCCCTC...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR CAA 90 bp TTTAACGAGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGCGAGGGCTCCTCTGCTaGGCCCGCTCCAGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: FNESTESLESPSRGTKRWRGLLC*ARSRPG
Trigger: CCCAGGCCTGGAGCGGGCCAAGCAGAGGAGCCCTCG...CCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGTTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CAA 90 bp GTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTGAGTCGAGGGCTCCTCTGCTaGGCCCGCTCCAGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: VSGITFKRHEKMVLREVSRGLLC*ARSRPG
Trigger: CCCAGGCCTGGAGCGGGCCAAGCAGAGGAGCCCTCG...ACTCACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CAA 90 bp ACGAGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGCACGGCAGGCAGCCTaGGCCTGGCAGCTCGTGGGA +
Preference number: 5 (lower is better)
Translates to: TRAQSLWNHLQEARKDGSARQAA*AWQLVG
Trigger: TCCCACGAGCTGCCAGGCCAAGGCTGCCTGCCGTGC...AGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000417060.5
CDS-3UTR CAA 90 bp GGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGGCCTCAGTGGCCAAAATaGCTCTCTTGCCCTCAGTTC +
Preference number: 5 (lower is better)
Translates to: GLNFTSVMEEGDLRLPGGPQWPK*LSCPQF
Trigger: GAACTGAGGGCAAGAGAGCAATTTTGGCCACTGAGG...CCCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR CAA 90 bp CCATGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTCTCGTCCAGGAGGTGTaGTTCCTGCAAGGCCGATGC +
Preference number: 5 (lower is better)
Translates to: PCTPTSLVGVCATAVDTGLVQEV*FLQGRC
Trigger: GCATCGGCCTTGCAGGAACAACACCTCCTGGACGAG...ACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS TCA 90 bp GGGCACTGGGCAGGGAGTCAAGTTTGCAGGAAGCTTCGCAGAGGGTaGCGCAAAACAGGAGCGTGGTCTGCACTTGGTTGGGCATTAAAC +
Preference number: 5 (lower is better)
Translates to: GHWAGSQVCRKLRRG*RKTGAWSALGWALN
Trigger: GTTTAATGCCCAACCAAGTGCAGACCACGCTCCTGTTTTGCGTCACCCTCTGCGAAGCTTCCTGCAAACTTGACTCCCTGCCCAGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397679.5
ENST00000445935.5
CDS CCA 90 bp GCTCAAGCTGAGGGACGACGACCTCATGCGACGTCAGTTTCCCCCTaGGACCACGAACCCACGGCCCCATTTCTCTTCTGTCTACTAAAA +
Preference number: 5 (lower is better)
Translates to: AQAEGRRPHATSVSP*DHEPTAPFLFCLLK
Trigger: TTTTAGTAGACAGAAGAGAAATGGGGCCGTGGGTTCGTGGTCCCAGGGGGAAACTGACGTCGCATGAGGTCGTCGTCCCTCAGCTTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS-3UTR CAA 90 bp ACGAGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGCCCAAGCACCGGTGTaGCCTGCAGGGCGGGCCTTA +
Preference number: 5 (lower is better)
Translates to: TRAQSLWNHLQEARKDGSAQAPV*PAGRAL
Trigger: TAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGC...AGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CAA 90 bp TTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTGCACGGCAGGCAGCCTaGGCCTGGCAGCTCGTGGGA +
Preference number: 5 (lower is better)
Translates to: FLDEIFISSGWWRPRPQLARQAA*AWQLVG
Trigger: TCCCACGAGCTGCCAGGCCAAGGCTGCCTGCCGTGC...AAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CAA 90 bp TGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCCCCTGGGAGGGGCTGTaGCCCTGGTGGGGTTCACAG +
Preference number: 5 (lower is better)
Translates to: WMKSLFHQAGGVHGLNFTPWEGL*PWWGSQ
Trigger: CTGTGAACCCCACCAGGGCAACAGCCCCTCCCAGGG...GGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
CDS TCA 90 bp ACCCAAACCTTCCGTGGTTTCCACCTCTGCAAGCTTATGTTCCGCTaGGCTCAAGCTGAGGGACGACGACCTCATGCGACGTCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: TQTFRGFHLCKLMFR*AQAEGRRPHATSVS
Trigger: GGAAACTGACGTCGCATGAGGTCGTCGTCCCTCAGCTTGAGCTCAGCGGAACATAAGCTTGCAGAGGTGGAAACCACGGAAGGTTTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS TCA 90 bp TGCTGCAAACAAGCACACGGCCCTCCACGACGAACCTTTTGCAAGTaGAGGCGCACGAACAGGCCCGGAGGACTACAAAGAAACCCAGAA +
Preference number: 5 (lower is better)
Translates to: CCKQAHGPPRRTFCK*RRTNRPGGLQRNPE
Trigger: TTCTGGGTTTCTTTGTAGTCCTCCGGGCCTGTTCGTGCGCCTTCACTTGCAAAAGGTTCGTCGTGGAGGGCCGTGTGCTTGTTTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS TCA 90 bp GGGCAGGATGGCCATGACTGGAAGACCCTTCCAGGGTTATGTGCATaGGGGTGGCCTCCTGAAATTGACCCAAGCGTGTCAGCTAGTTTC +
Preference number: 5 (lower is better)
Translates to: GQDGHDWKTLPGLCA*GWPPEIDPSVSASF
Trigger: GAAACTAGCTGACACGCTTGGGTCAATTTCAGGAGGCCACCCTCATGCACATAACCCTGGAAGGGTCTTCCAGTCATGGCCATCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475776.1
CDS GCA 90 bp GGGGCAGAGGTCAGCACCCTCCTCGGTGCAGCTAACCCAGGAACTTaGCTCAGTGGCCAAAATTGCTCTCTTGCCCTCAGTTCTGTAAAT +
Preference number: 5 (lower is better)
Translates to: GAEVSTLLGAANPGT*LSGQNCSLALSSVN
Trigger: ATTTACAGAACTGAGGGCAAGAGAGCAATTTTGGCCACTGAGGCAAGTTCCTGGGTTAGCTGCACCGAGGAGGGTGCTGACCTCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR CAA 90 bp AATCCTCCCACCTCAGCCCCCAGAGCTGCTGAGATAACAGGCGCATATCACCACTCCACGACGAACCTTTaGCAAGTGAAGGCGCACGAA +
Preference number: 5 (lower is better)
Translates to: NPPTSAPRAAEITGAYHHSTTNL*QVKAHE
Trigger: TTCGTGCGCCTTCACTTGCAAAAGGTTCGTCGTGGA...GTGGTGATATGCGCCTGTTATCTCAGCAGCTCTGGGGGCTGAGGTGGGAGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR CAA 90 bp GAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGGCTGCAAGGTGAGCTaGCGTCAGCGAGGAGCCACT +
Preference number: 5 (lower is better)
Translates to: EIFISSGWWRPRPQLYLRGCKVS*RQRGAT
Trigger: AGTGGCTCCTCGCTGACGCAAGCTCACCTTGCAGCC...ACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR CAA 90 bp GTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTGAGTGCCCAAGCACCGGTGTaGCCTGCAGGGCGGGCCTTA +
Preference number: 5 (lower is better)
Translates to: VSGITFKRHEKMVLREVSAQAPV*PAGRAL
Trigger: TAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGC...ACTCACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CAA 90 bp TTAAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCGCACGGCAGGCAGCCTaGGCCTGGCAGCTCGTGGGA +
Preference number: 5 (lower is better)
Translates to: LNSFWMKSLFHQAGGVHGARQAA*AWQLVG
Trigger: TCCCACGAGCTGCCAGGCCAAGGCTGCCTGCCGTGC...GCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CAA 90 bp TCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTGAGTGTTGCACGGCAGGCAGCCTaGGCCTGGCAGCTCGTGGGA +
Preference number: 5 (lower is better)
Translates to: SGITFKRHEKMVLREVSVARQAA*AWQLVG
Trigger: TCCCACGAGCTGCCAGGCCAAGGCTGCCTGCCGTGC...AACACTCACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397683.5
ENST00000417060.5
CDS-3UTR CAA 90 bp CGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTGGCATCAGTATCTATGGTaGTGTGCCTGTCCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: RPQLYLRDGRGGSEAPRWHQYLW*CACPVF
Trigger: GAAGACAGGACAGGCACACAACCATAGATACTGATG...CCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS TCA 90 bp GGCGGGCCTTACCTCCTGGAGACCAGCCAGAGTACTCTATGGCCATaGAAAGAGCAGAACACCACCAGGTCAAAGTGGCCGTTTTACAGA +
Preference number: 5 (lower is better)
Translates to: GGPYLLETSQSTLWP*KEQNTTRSKWPFYR
Trigger: TCTGTAAAACGGCCACTTTGACCTGGTGGTGTTCTGCTCTTTTCATGGCCATAGAGTACTCTGGCTGGTCTCCAGGAGGTAAGGCCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS-3UTR CAA 90 bp TTAAACTCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCGCCCAAGCACCGGTGTaGCCTGCAGGGCGGGCCTTA +
Preference number: 5 (lower is better)
Translates to: LNSFWMKSLFHQAGGVHGAQAPV*PAGRAL
Trigger: TAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGC...GCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGAGTTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CAA 90 bp TTTAACGAGAGCACAGAGTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGGCTGGGGGCAGGGCCTaGAGCATCCAGTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: FNESTESLESPSRGTKRWAGGRA*SIQFCR
Trigger: CCTGCAGAACTGGATGCTCAAGGCCCTGCCCCCAGC...CCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGACTCTGTGCTCTCGTTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CAA 90 bp CTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTGAGTGTGCTGGGGGCAGGGCCTaGAGCATCCAGTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LWNHLQEARKDGSERSECAGGRA*SIQFCR
Trigger: CCTGCAGAACTGGATGCTCAAGGCCCTGCCCCCAGC...ACACTCACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397683.5
ENST00000417060.5
ENST00000491666.5
CDS-3UTR CAA 90 bp ATTTTTGAGACAGGGGCCTGCTCTGTGGTCCAGGCTATAGTGCAGTGGTTCCATTGGTGGCGTAGGATTTaGTTTCGGGTTCCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: IFETGACSVVQAIVQWFHWWRRI*FRVPRV
Trigger: GACCCTGGGAACCCGAAACAAAATCCTACGCCACCA...ATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGTCTCAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CAA 90 bp GAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGAGGGCGCGTTTAAGTaGCAGTTGCTGAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: EIFISSGWWRPRPQLYLREGAFK*QLLRRL
Trigger: CAGCCTCCTCAGCAACTGCAACTTAAACGCGCCCTC...ACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR CAA 90 bp TCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTGAGTGTTGCCGAGATCGCTCCATaGCACTCCAGCCTGGGCGAC +
Preference number: 5 (lower is better)
Translates to: SGITFKRHEKMVLREVSVAEIAP*HSSLGD
Trigger: GTCGCCCAGGCTGGAGTGCAATGGAGCGATCTCGGC...AACACTCACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491666.5
CDS TCA 90 bp TTCAGGTCCTCCTGGAATTGGGCCCTTACTCAACATTTCCAGTCCTaGTGGAAACCTGCACCCAGGCAGGTCTCTAAGCTAACAGTGTCC +
Preference number: 5 (lower is better)
Translates to: FRSSWNWALTQHFQS*WKPAPRQVSKLTVS
Trigger: GGACACTGTTAGCTTAGAGACCTGCCTGGGTGCAGGTTTCCATCAGGACTGGAAATGTTGAGTAAGGGCCCAATTCCAGGAGGACCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475776.1
CDS-3UTR CAA 90 bp CATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGATGGAAGAGGGGATGTGGCTAAAGCTATaGATCTTTTCTGTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: HQAGGVHGLNFTSVMEEGMWLKL*IFSVLA
Trigger: AGCCAGAACAGAAAAGATCAATAGCTTTAGCCACAT...CCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS CCA 90 bp GAAGCTTCGCAGAGGGTGACGCAAAACAGGAGCGTGGTCTGCACTTaGTTGGGCATTAAACTCCACGTTGATGAGTTAGTCAATCCCACT +
Preference number: 5 (lower is better)
Translates to: EASQRVTQNRSVVCT*LGIKLHVDELVNPT
Trigger: AGTGGGATTGACTAACTCATCAACGTGGAGTTTAATGCCCAACCAAGTGCAGACCACGCTCCTGTTTTGCGTCACCCTCTGCGAAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397679.5
ENST00000445935.5
CDS-3UTR CAA 90 bp GAGCTTTGGTTTGAGCTTTTAACGAGAGCACAGAGTCTCTGGAATCACCTTCAACTCGTCCAGGAGGTGTaGTTCCTGCAAGGCCGATGC +
Preference number: 5 (lower is better)
Translates to: ELWFELLTRAQSLWNHLQLVQEV*FLQGRC
Trigger: GCATCGGCCTTGCAGGAACAACACCTCCTGGACGAG...TTGAAGGTGATTCCAGAGACTCTGTGCTCTCGTTAAAAGCTCAAACCAAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS GCA 90 bp TTGCAGGAAGCTTCGCAGAGGGTGACGCAAAACAGGAGCGTGGTCTaGACTTGGTTGGGCATTAAACTCCACGTTGATGAGTTAGTCAAT +
Preference number: 5 (lower is better)
Translates to: LQEASQRVTQNRSVV*TWLGIKLHVDELVN
Trigger: ATTGACTAACTCATCAACGTGGAGTTTAATGCCCAACCAAGTGCAGACCACGCTCCTGTTTTGCGTCACCCTCTGCGAAGCTTCCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397679.5
ENST00000445935.5
CDS-3UTR CAA 90 bp TCTTTCTGGATGAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTCCACGACGAACCTTTaGCAAGTGAAGGCGCACGAA +
Preference number: 5 (lower is better)
Translates to: SFWMKSLFHQAGGVHGLNSTTNL*QVKAHE
Trigger: TTCGTGCGCCTTCACTTGCAAAAGGTTCGTCGTGGA...GTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTCATCCAGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291691.12
ENST00000397682.7
CDS-3UTR CAA 90 bp GAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTGTGGTCTGCACTTGGTaGGGCATTAAACTCCACGTT +
Preference number: 5 (lower is better)
Translates to: EIFISSGWWRPRPQLYLRVVCTW*GIKLHV
Trigger: AACGTGGAGTTTAATGCCCAACCAAGTGCAGACCAC...ACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS CCA 90 bp TTGCCTCAGTGGCCAAAATTGCTCTCTTGCCCTCAGTTCTGTAAATaGCCCATGTCCATCAGTATCTATGGTTGTGTGCCTGTCCTGTCT +
Preference number: 5 (lower is better)
Translates to: LPQWPKLLSCPQFCK*PMSISIYGCVPVLS
Trigger: AGACAGGACAGGCACACAACCATAGATACTGATGGACATGGGCCATTTACAGAACTGAGGGCAAGAGAGCAATTTTGGCCACTGAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS-3UTR CAA 90 bp CCATGCACCCCTACTTCTTTAGTGGGAGTCTGTGCCACAGCTGTGGACACAGGTATGTGGCTAAAGCTATaGATCTTTTCTGTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: PCTPTSLVGVCATAVDTGMWLKL*IFSVLA
Trigger: AGCCAGAACAGAAAAGATCAATAGCTTTAGCCACAT...ACCTGTGTCCACAGCTGTGGCACAGACTCCCACTAAAGAAGTAGGGGTGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS CCA 90 bp CACGAACAGGCCCGGAGGACTACAAAGAAACCCAGAAACCAGACTTaGACACATGAAATAAAGGGGTTAGCTGAAGGAATACTCCACAGT +
Preference number: 5 (lower is better)
Translates to: HEQARRTTKKPRNQT*THEIKGLAEGILHS
Trigger: ACTGTGGAGTATTCCTTCAGCTAACCCCTTTATTTCATGTGTCCAAGTCTGGTTTCTGGGTTTCTTTGTAGTCCTCCGGGCCTGTTCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS-3UTR CAA 90 bp GAAATCTTTATTTCATCAGGCTGGTGGCGTCCACGGCCTCAACTTTACCTCCGTATGTGGCTAAAGCTATaGATCTTTTCTGTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: EIFISSGWWRPRPQLYLRMWLKL*IFSVLA
Trigger: AGCCAGAACAGAAAAGATCAATAGCTTTAGCCACAT...ACGGAGGTAAAGTTGAGGCCGTGGACGCCACCAGCCTGATGAAATAAAGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
CDS-3UTR CAA 90 bp GTCTCTGGAATCACCTTCAAGAGGCACGAAAAGATGGTTCTGAGAGAAGTGAGTATCAGAGATGCTTCCTaGCCAGATTCTCCTTTTCGT +
Preference number: 5 (lower is better)
Translates to: VSGITFKRHEKMVLREVSIRDAS*PDSPFR
Trigger: ACGAAAAGGAGAATCTGGCAAGGAAGCATCTCTGAT...ACTCACTTCTCTCAGAACCATCTTTTCGTGCCTCTTGAAGGTGATTCCAGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS CCA 72 bp GCCCGCGCCTGCAGGGAGCCCGGCCCGCTGTCCTGGTaGACACAAAGCCCAGGGGCCGCCCGCGCGGGACCA +
Preference number: 6 (lower is better)
Translates to: ARACREPGPLSW*TQSPGAARAGP
Trigger: TGGTCCCGCGCGGGCGGCCCCTGGGCTTTGTGTCCACCAGGACAGCGGGCCGGGCTCCCTGCAGGCGCGGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS TCA 72 bp CGGGAGAAAACGGCCTGGCCCTGTCCGGGTGGTTGCTaGGCACCGTTCGGCGCCGCCCGCGCCTGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: REKTAWPCPGGC*APFGAARACRE
Trigger: CTCCCTGCAGGCGCGGGCGGCGCCGAACGGTGCTCAGCAACCACCCGGACAGGGCCAGGCCGTTTTCTCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS TCA 72 bp GGGCCTTACCTCCTGGAGACCAGCGCGCGCGCCAGCTaGGAAAACGCCCACCCCGGCGGTCCCGCCACAGGT +
Preference number: 6 (lower is better)
Translates to: GPYLLETSARAS*ENAHPGGPATG
Trigger: ACCTGTGGCGGGACCGCCGGGGTGGGCGTTTTCTCAGCTGGCGCGCGCGCTGGTCTCCAGGAGGTAAGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397680.5
CDS CCA 72 bp GTGGTGCACGGCAGGCAGCCTTGGCCTGGCAGCTCGTaGGACCCTCGGGGGCACATGTGGCGGGTCCTGCAG +
Preference number: 6 (lower is better)
Translates to: VVHGRQPWPGSS*DPRGHMWRVLQ
Trigger: CTGCAGGACCCGCCACATGTGCCCCCGAGGGTCCCACGAGCTGCCAGGCCAAGGCTGCCTGCCGTGCACCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
ENST00000397683.5
ENST00000417060.5
ENST00000472607.1
CDS CCA 72 bp CTCCGTGATGGAAGAGGGGGATCTGAGGCTCCCAGGTaGGCCGGCGCCGCCACTCAGGGTGGGCCAGGCGTC +
Preference number: 6 (lower is better)
Translates to: LRDGRGGSEAPR*AGAATQGGPGV
Trigger: GACGCCTGGCCCACCCTGAGTGGCGGCGCCGGCCCACCTGGGAGCCTCAGATCCCCCTCTTCCATCACGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397682.7
CDS TCA 72 bp ACTGCAGTGCCCCAGAAGCCAGCGCTGGGCGCCGCGTaGCAGTTGCCAGGCTGCCAGACACAGGGAGGCCCC +
Preference number: 6 (lower is better)
Translates to: TAVPQKPALGAA*QLPGCQTQGGP
Trigger: GGGGCCTCCCTGTGTCTGGCAGCCTGGCAACTGTCACGCGGCGCCCAGCGCTGGCTTCTGGGGCACTGCAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS CCA 72 bp GTGGTGGTGGTGGTGGTGGTGCACGGCAGGCAGCCTTaGCCTGGCAGCTCGTGGGACCCTCGGGGGCACATG +
Preference number: 6 (lower is better)
Translates to: VVVVVVVHGRQP*PGSSWDPRGHM
Trigger: CATGTGCCCCCGAGGGTCCCACGAGCTGCCAGGCCAAGGCTGCCTGCCGTGCACCACCACCACCACCACCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
ENST00000397683.5
ENST00000417060.5
ENST00000472607.1
CDS CAA 72 bp GGTGGTGGTGGTGGTGGTGGTGCACGGCAGGCAGCCTaGGCCTGGCAGCTCGTGGGACCCTCGGGGGCACAT +
Preference number: 6 (lower is better)
Translates to: GGGGGGGARQAA*AWQLVGPSGAH
Trigger: ATGTGCCCCCGAGGGTCCCACGAGCTGCCAGGCCAAGGCTGCCTGCCGTGCACCACCACCACCACCACCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
ENST00000397683.5
ENST00000417060.5
ENST00000472607.1
CDS CAA 90 bp ACACAGCATGGTGGTGGTGGTGGTGGTGGTGCACGGCAGGCAGCCTaGGCCTGGCAGCTCGTGGGACCCTCGGGGGCACATGTGGCGGGT +
Preference number: 6 (lower is better)
Translates to: TQHGGGGGGGARQAA*AWQLVGPSGAHVAG
Trigger: ACCCGCCACATGTGCCCCCGAGGGTCCCACGAGCTGCCAGGCCAAGGCTGCCTGCCGTGCACCACCACCACCACCACCACCATGCTGTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
ENST00000397683.5
ENST00000417060.5
ENST00000472607.1
CDS CAA 90 bp TGGCCCGCTCCAGGCCTGGGCCCGAGAGAGCTCGTCCAGGAGGTGTaGTTCCTGCAAGGCCGATGCAGAGCTGCTGCACACGGGGACGGG +
Preference number: 6 (lower is better)
Translates to: WPAPGLGPRELVQEV*FLQGRCRAAAHGDG
Trigger: CCCGTCCCCGTGTGCAGCAGCTCTGCATCGGCCTTGCAGGAACAACACCTCCTGGACGAGCTCTCTCGGGCCCAGGCCTGGAGCGGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
ENST00000397683.5
CDS CCA 72 bp GCCCCAGGTGGCCACACAGCATGGTGGTGGTGGTGGTaGTGGTGCACGGCAGGCAGCCTTGGCCTGGCAGCT +
Preference number: 6 (lower is better)
Translates to: APGGHTAWWWWW*WCTAGSLGLAA
Trigger: AGCTGCCAGGCCAAGGCTGCCTGCCGTGCACCACCACCACCACCACCACCATGCTGTGTGGCCACCTGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
ENST00000397683.5
ENST00000417060.5
ENST00000472607.1
CDS CCA 72 bp GCAGCCCCAGGTGGCCACACAGCATGGTGGTGGTGGTaGTGGTGGTGCACGGCAGGCAGCCTTGGCCTGGCA +
Preference number: 6 (lower is better)
Translates to: AAPGGHTAWWWW*WWCTAGSLGLA
Trigger: TGCCAGGCCAAGGCTGCCTGCCGTGCACCACCACCACCACCACCACCATGCTGTGTGGCCACCTGGGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
ENST00000397683.5
ENST00000417060.5
ENST00000472607.1
CDS CCA 72 bp GTGGCAGCCCCAGGTGGCCACACAGCATGGTGGTGGTaGTGGTGGTGGTGCACGGCAGGCAGCCTTGGCCTG +
Preference number: 6 (lower is better)
Translates to: VAAPGGHTAWWW*WWWCTAGSLGL
Trigger: CAGGCCAAGGCTGCCTGCCGTGCACCACCACCACCACCACCACCATGCTGTGTGGCCACCTGGGGCTGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
ENST00000397683.5
ENST00000417060.5
ENST00000472607.1
CDS CCA 72 bp ACCCTCCCTGGACTGCAGTGCCCCAGAAGCCAGCGCTaGGCGCCGCGTGACAGTTGCCAGGCTGCCAGACAC +
Preference number: 6 (lower is better)
Translates to: TLPGLQCPRSQR*APRDSCQAARH
Trigger: GTGTCTGGCAGCCTGGCAACTGTCACGCGGCGCCCAGCGCTGGCTTCTGGGGCACTGCAGTCCAGGGAGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS GCA 72 bp GAACTGCTCAGCAGGAGCCCAAGCACCGGTGTTGCCTaGAGGGCGGGCCTTACCTCCTGGAGACCAGCGCGC +
Preference number: 6 (lower is better)
Translates to: ELLSRSPSTGVA*RAGLTSWRPAR
Trigger: GCGCGCTGGTCTCCAGGAGGTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGCTCCTGCTGAGCAGTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397680.5
CDS TCA 72 bp GCGGGCTTTCTGACCGCATTCGGCCGAGTTCTTCTCTaGAGACCCAGGACCCCCGGCCGAGGGGGCGCATTC +
Preference number: 6 (lower is better)
Translates to: AGFLTAFGRVLL*RPRTPGRGGAF
Trigger: GAATGCGCCCCCTCGGCCGGGGGTCCTGGGTCTTCAGAGAAGAACTCGGCCGAATGCGGTCAGAAAGCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS CAA 72 bp GAGGGGGCGCATTCGGCGGGCTGGTGGCGTAGGATTTaGTTTCGGGTTCCCAGGGTCCCGGCAAGGGTGAGG +
Preference number: 6 (lower is better)
Translates to: EGAHSAGWWRRI*FRVPRVPARVR
Trigger: CCTCACCCTTGCCGGGACCCTGGGAACCCGAAACAAAATCCTACGCCACCAGCCCGCCGAATGCGCCCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS CAA 90 bp TTACTCGCAGGAAAGAACTGCTCAGCAGGAGCCCAAGCACCGGTGTaGCCTGCAGGGCGGGCCTTACCTCCTGGAGACCAGCGCGCGCGC +
Preference number: 6 (lower is better)
Translates to: LLAGKNCSAGAQAPV*PAGRALPPGDQRAR
Trigger: GCGCGCGCGCTGGTCTCCAGGAGGTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGCTCCTGCTGAGCAGTTCTTTCCTGCGAGTAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397680.5
CDS TCA 72 bp GTTAGTTTCCCAAGTTCCACCTACGCGCGCGCCAGCTaGGAAAACGCCCACCCCGGCGGTCCCGCCACAGGT +
Preference number: 6 (lower is better)
Translates to: VSFPSSTYARAS*ENAHPGGPATG
Trigger: ACCTGTGGCGGGACCGCCGGGGTGGGCGTTTTCTCAGCTGGCGCGCGCGTAGGTGGAACTTGGGAAACTAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS GCA 72 bp GAACTGCTCAGCAGGAGCCCAAGCACCGGTGTTGCCTaGAGGGCGGGCCTTACCTCCTGGAGACCAGCCACA +
Preference number: 6 (lower is better)
Translates to: ELLSRSPSTGVA*RAGLTSWRPAT
Trigger: TGTGGCTGGTCTCCAGGAGGTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGCTCCTGCTGAGCAGTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397682.7
ENST00000475776.1
CDS GCA 72 bp TGGGCCCGAGAGAGCTCGTCCAGGAGGTGTTGTTCCTaGAAGGCCGATGCAGAGCTGCTGCACACGGGGACG +
Preference number: 6 (lower is better)
Translates to: WARESSSRRCCS*KADAELLHTGT
Trigger: CGTCCCCGTGTGCAGCAGCTCTGCATCGGCCTTGCAGGAACAACACCTCCTGGACGAGCTCTCTCGGGCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
ENST00000397683.5
CDS GCA 72 bp GAACTGCTCAGCAGGAGCCCAAGCACCGGTGTTGCCTaGAGGGCGGGCCTTACCTCCTGGAGACCAGCCAGA +
Preference number: 6 (lower is better)
Translates to: ELLSRSPSTGVA*RAGLTSWRPAR
Trigger: TCTGGCTGGTCTCCAGGAGGTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGCTCCTGCTGAGCAGTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS GCA 72 bp GAACTGCTCAGCAGGAGCCCAAGCACCGGTGTTGCCTaGAGGGCGGGCCTTACCTCCTGGAGACCAGCCTTG +
Preference number: 6 (lower is better)
Translates to: ELLSRSPSTGVA*RAGLTSWRPAL
Trigger: CAAGGCTGGTCTCCAGGAGGTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGCTCCTGCTGAGCAGTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445935.5
CDS CAA 72 bp CCAGGCCTGGGCCCGAGAGAGCTCGTCCAGGAGGTGTaGTTCCTGCAAGGCCGATGCAGAGCTGCTGCACAC +
Preference number: 6 (lower is better)
Translates to: PGLGPRELVQEV*FLQGRCRAAAH
Trigger: GTGTGCAGCAGCTCTGCATCGGCCTTGCAGGAACAACACCTCCTGGACGAGCTCTCTCGGGCCCAGGCCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
ENST00000397683.5
CDS GCA 72 bp GAAAGAACTGCTCAGCAGGAGCCCAAGCACCGGTGTTaGCTGCAGGGCGGGCCTTACCTCCTGGAGACCAGC +
Preference number: 6 (lower is better)
Translates to: ERTAQQEPKHRC*LQGGPYLLETS
Trigger: GCTGGTCTCCAGGAGGTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGCTCCTGCTGAGCAGTTCTTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
ENST00000397683.5
ENST00000445935.5
ENST00000475776.1
CDS CAA 72 bp GGAAAGAACTGCTCAGCAGGAGCCCAAGCACCGGTGTaGCCTGCAGGGCGGGCCTTACCTCCTGGAGACCAG +
Preference number: 6 (lower is better)
Translates to: GKNCSAGAQAPV*PAGRALPPGDQ
Trigger: CTGGTCTCCAGGAGGTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGCTCCTGCTGAGCAGTTCTTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
ENST00000397683.5
ENST00000445935.5
ENST00000475776.1
CDS CAA 90 bp TTACTCGCAGGAAAGAACTGCTCAGCAGGAGCCCAAGCACCGGTGTaGCCTGCAGGGCGGGCCTTACCTCCTGGAGACCAGCCTTGGGGC +
Preference number: 6 (lower is better)
Translates to: LLAGKNCSAGAQAPV*PAGRALPPGDQPWG
Trigger: GCCCCAAGGCTGGTCTCCAGGAGGTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGCTCCTGCTGAGCAGTTCTTTCCTGCGAGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445935.5
CDS CAA 90 bp TTACTCGCAGGAAAGAACTGCTCAGCAGGAGCCCAAGCACCGGTGTaGCCTGCAGGGCGGGCCTTACCTCCTGGAGACCAGCCTGAGGGA +
Preference number: 6 (lower is better)
Translates to: LLAGKNCSAGAQAPV*PAGRALPPGDQPEG
Trigger: TCCCTCAGGCTGGTCTCCAGGAGGTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGCTCCTGCTGAGCAGTTCTTTCCTGCGAGTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS TCA 72 bp GGCCAGGTACAGGCGCCTCTCCGGGCAGGATGGCCATaGCTGGAAGACCCTTCCAGGGTTATGTGCATGAGG +
Preference number: 6 (lower is better)
Translates to: GQVQAPLRAGWP*LEDPSRVMCMR
Trigger: CCTCATGCACATAACCCTGGAAGGGTCTTCCAGTCATGGCCATCCTGCCCGGAGAGGCGCCTGTACCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
ENST00000397683.5
ENST00000445935.5
ENST00000475776.1
CDS GCA 72 bp GAGCCACTCCAGCACGCTCGGGAAGGGCATCGTTACTaGTGCAAACAAGCACACGGCCCTCCACGACGAACC +
Preference number: 6 (lower is better)
Translates to: EPLQHAREGHRY*CKQAHGPPRRT
Trigger: GGTTCGTCGTGGAGGGCCGTGTGCTTGTTTGCAGCAGTAACGATGCCCTTCCCGAGCGTGCTGGAGTGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS GCA 72 bp ACCTGTGTGTCAGGGGAGGGCGCCCCACCTGTGTACTaGCTCCAGGGTGTTAATACCTCCCTCCTAGGGACC +
Preference number: 6 (lower is better)
Translates to: TCVSGEGAPPVY*LQGVNTSLLGT
Trigger: GGTCCCTAGGAGGGAGGTATTAACACCCTGGAGGCAGTACACAGGTGGGGCGCCCTCCCCTGACACACAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS CAA 90 bp TTACTCGCAGGAAAGAACTGCTCAGCAGGAGCCCAAGCACCGGTGTaGCCTGCAGGGCGGGCCTTACCTCCTGGAGACCAGCCACACAGA +
Preference number: 6 (lower is better)
Translates to: LLAGKNCSAGAQAPV*PAGRALPPGDQPHR
Trigger: TCTGTGTGGCTGGTCTCCAGGAGGTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGCTCCTGCTGAGCAGTTCTTTCCTGCGAGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291691.12
ENST00000397682.7
ENST00000475776.1
CDS CAA 90 bp TTACTCGCAGGAAAGAACTGCTCAGCAGGAGCCCAAGCACCGGTGTaGCCTGCAGGGCGGGCCTTACCTCCTGGAGACCAGCCAGAGTAC +
Preference number: 6 (lower is better)
Translates to: LLAGKNCSAGAQAPV*PAGRALPPGDQPEY
Trigger: GTACTCTGGCTGGTCTCCAGGAGGTAAGGCCCGCCCTGCAGGCAACACCGGTGCTTGGGCTCCTGCTGAGCAGTTCTTTCCTGCGAGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS GCA 72 bp GTTCGCTCAGAGGGTGCAGGGCCTACCCGGAGTCTCTaGAGAAGGTCCCTCCTTCTCTTCAGAGCAGTCTGC +
Preference number: 6 (lower is better)
Translates to: VRSEGAGPTRSL*RRSLLLFRAVC
Trigger: GCAGACTGCTCTGAAGAGAAGGAGGGACCTTCTGCAGAGACTCCGGGTAGGCCCTGCACCCTCTGAGCGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475776.1
CDS CCA 72 bp GAGGGACGACGACCTCATGCGACGTCAGTTTCCCCCTaGGACCACGAACCCACGGCCCCATTTCTCTTCTGT +
Preference number: 6 (lower is better)
Translates to: EGRRPHATSVSP*DHEPTAPFLFC
Trigger: ACAGAAGAGAAATGGGGCCGTGGGTTCGTGGTCCCAGGGGGAAACTGACGTCGCATGAGGTCGTCGTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS CAA 90 bp CTGAGCGAGATTCCAGGGCTTCCTGAGGGCGCGTTTAAGTTGCAGTaGCTGAGGAGGCTGCAAGGTGAGCTTGCGTCAGCGAGGAGCCAC +
Preference number: 6 (lower is better)
Translates to: LSEIPGLPEGAFKLQ*LRRLQGELASARSH
Trigger: GTGGCTCCTCGCTGACGCAAGCTCACCTTGCAGCCTCCTCAGCAACTGCAACTTAAACGCGCCCTCAGGAAGCCCTGGAATCTCGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS TCA 72 bp CAGGGCTTCCTGAGGGCGCGTTTAAGTTGCAGTTGCTaGGGAGGCTGCAAGGTGAGCTTGCGTCAGCGAGGA +
Preference number: 6 (lower is better)
Translates to: QGFLRARLSCSC*GGCKVSLRQRG
Trigger: TCCTCGCTGACGCAAGCTCACCTTGCAGCCTCCTCAGCAACTGCAACTTAAACGCGCCCTCAGGAAGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS TCA 72 bp TGGTGCCTTAAGGCTGAGCAGCTATCTCTGCTACAGTaGGCTCAGCCAGGTTCGCTCAGAGGGTGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: WCLKAEQLSLLQ*AQPGSLRGCRA
Trigger: GGCCCTGCACCCTCTGAGCGAACCTGGCTGAGCTCACTGTAGCAGAGATAGCTGCTCAGCCTTAAGGCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475776.1
CDS TCA 72 bp CTCCCCTGCATCTCTGCCACTCGGATGCATCTTTGGTaGGTGCCGTGGGAGCAAACCTCCAGGCATCCCAGA +
Preference number: 6 (lower is better)
Translates to: LPCISATRMHLW*VPWEQTSRHPR
Trigger: TCTGGGATGCCTGGAGGTTTGCTCCCACGGCACTCACCAAAGATGCATCCGAGTGGCAGAGATGCAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475776.1
CDS GCA 72 bp CCACTCCAGCACGCTCGGGAAGGGCATCGTTACTGCTaGAAACAAGCACACGGCCCTCCACGACGAACCTTT +
Preference number: 6 (lower is better)
Translates to: PLQHAREGHRYC*KQAHGPPRRTF
Trigger: AAAGGTTCGTCGTGGAGGGCCGTGTGCTTGTTTGCAGCAGTAACGATGCCCTTCCCGAGCGTGCTGGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS GCA 72 bp CCTCCCTCCCTGGTTCTGTTACTCGCAGGAAAGAACTaGTCAGCAGGAGCCCAAGCACCGGTGTTGCCTGCA +
Preference number: 6 (lower is better)
Translates to: PPSLVLLLAGKN*SAGAQAPVLPA
Trigger: TGCAGGCAACACCGGTGCTTGGGCTCCTGCTGAGCAGTTCTTTCCTGCGAGTAACAGAACCAGGGAGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291691.12
ENST00000397679.5
ENST00000397680.5
ENST00000397682.7
ENST00000397683.5
ENST00000417060.5
ENST00000445935.5
ENST00000475776.1
ENST00000491666.5
CDS GCA 72 bp TCGAGGTGGAGGCCCTCAGGTCCCCCTTCCACGTTCTaGCGTTCTTGCTCCAGCTTCTGTGAGGAAGAGAGA +
Preference number: 6 (lower is better)
Translates to: SRWRPSGPPSTF*RSCSSFCEEER
Trigger: TCTCTCTTCCTCACAGAAGCTGGAGCAAGAACGGCAGAACGTGGAAGGGGGACCTGAGGGCCTCCACCTCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397682.7
ENST00000397683.5
CDS GCA 72 bp CCCCGACCTGGTGCCTTAAGGCTGAGCAGCTATCTCTaGTACAGTGAGCTCAGCCAGGTTCGCTCAGAGGGT +
Preference number: 6 (lower is better)
Translates to: PRPGALRLSSYL*YSELSQVRSEG
Trigger: ACCCTCTGAGCGAACCTGGCTGAGCTCACTGTAGCAGAGATAGCTGCTCAGCCTTAAGGCACCAGGTCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475776.1
CDS CAA 72 bp CTGCAAACAAGCACACGGCCCTCCACGACGAACCTTTaGCAAGTGAAGGCGCACGAACAGGCCCGGAGGACT +
Preference number: 6 (lower is better)
Translates to: LQTSTRPSTTNL*QVKAHEQARRT
Trigger: AGTCCTCCGGGCCTGTTCGTGCGCCTTCACTTGCAAAAGGTTCGTCGTGGAGGGCCGTGTGCTTGTTTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS TCA 72 bp CCACCTCTGCAAGCTTATGTTCCGCTGAGCTCAAGCTaGGGGACGACGACCTCATGCGACGTCAGTTTCCCC +
Preference number: 6 (lower is better)
Translates to: PPLQAYVPLSSS*GTTTSCDVSFP
Trigger: GGGGAAACTGACGTCGCATGAGGTCGTCGTCCCTCAGCTTGAGCTCAGCGGAACATAAGCTTGCAGAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS TCA 72 bp CAAGCACACGGCCCTCCACGACGAACCTTTTGCAAGTaGAGGCGCACGAACAGGCCCGGAGGACTACAAAGA +
Preference number: 6 (lower is better)
Translates to: QAHGPPRRTFCK*RRTNRPGGLQR
Trigger: TCTTTGTAGTCCTCCGGGCCTGTTCGTGCGCCTTCACTTGCAAAAGGTTCGTCGTGGAGGGCCGTGTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS TCA 72 bp CCCTTCCACGTTCTGCCGTTCTTGCTCCAGCTTCTGTaGGGAAGAGAGACCGTGACAGAGACGGTGGCTCCA +
Preference number: 6 (lower is better)
Translates to: PFHVLPFLLQLL*GRETVTETVAP
Trigger: TGGAGCCACCGTCTCTGTCACGGTCTCTCTTCCTCACAGAAGCTGGAGCAAGAACGGCAGAACGTGGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397682.7
ENST00000397683.5
CDS CCA 72 bp GAGTTAGTCAATCCCACTAGCAGGCAGACTGACATGTaGGGGATGTCAGCAGCAGGGGCCCAGACCTGTGGA +
Preference number: 6 (lower is better)
Translates to: ELVNPTSRQTDM*GMSAAGAQTCG
Trigger: TCCACAGGTCTGGGCCCCTGCTGCTGACATCCCCCACATGTCAGTCTGCCTGCTAGTGGGATTGACTAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS CAA 72 bp ATTCCAGGGCTTCCTGAGGGCGCGTTTAAGTTGCAGTaGCTGAGGAGGCTGCAAGGTGAGCTTGCGTCAGCG +
Preference number: 6 (lower is better)
Translates to: IPGLPEGAFKLQ*LRRLQGELASA
Trigger: CGCTGACGCAAGCTCACCTTGCAGCCTCCTCAGCAACTGCAACTTAAACGCGCCCTCAGGAAGCCCTGGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS CAA 72 bp AGCGAGATTCCAGGGCTTCCTGAGGGCGCGTTTAAGTaGCAGTTGCTGAGGAGGCTGCAAGGTGAGCTTGCG +
Preference number: 6 (lower is better)
Translates to: SEIPGLPEGAFK*QLLRRLQGELA
Trigger: CGCAAGCTCACCTTGCAGCCTCCTCAGCAACTGCAACTTAAACGCGCCCTCAGGAAGCCCTGGAATCTCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS TCA 72 bp TTCCGTGGTTTCCACCTCTGCAAGCTTATGTTCCGCTaGGCTCAAGCTGAGGGACGACGACCTCATGCGACG +
Preference number: 6 (lower is better)
Translates to: FRGFHLCKLMFR*AQAEGRRPHAT
Trigger: CGTCGCATGAGGTCGTCGTCCCTCAGCTTGAGCTCAGCGGAACATAAGCTTGCAGAGGTGGAAACCACGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS TCA 72 bp GGTGGCTCCACGCAAAGGCCCTGTGTGCTCCAGGAATaGCTAAGAGGCTTTCTGTCCCAAGAGCTTCAGCGT +
Preference number: 6 (lower is better)
Translates to: GGSTQRPCVLQE*LRGFLSQELQR
Trigger: ACGCTGAAGCTCTTGGGACAGAAAGCCTCTTAGTCATTCCTGGAGCACACAGGGCCTTTGCGTGGAGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397679.5
ENST00000397682.7
ENST00000397683.5
CDS TCA 72 bp TGGGACAGGGTTCCTCCTTGTGCGGAACTTCAGGAATaGAAGAATCTGTCACTCAGGGTGGGCCAGGCGTCC +
Preference number: 6 (lower is better)
Translates to: WDRVPPCAELQE*KNLSLRVGQAS
Trigger: GGACGCCTGGCCCACCCTGAGTGACAGATTCTTTCATTCCTGAAGTTCCGCACAAGGAGGAACCCTGTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS GCA 72 bp GTCAGCACCCTCCTCGGTGCAGCTAACCCAGGAACTTaGCTCAGTGGCCAAAATTGCTCTCTTGCCCTCAGT +
Preference number: 6 (lower is better)
Translates to: VSTLLGAANPGT*LSGQNCSLALS
Trigger: ACTGAGGGCAAGAGAGCAATTTTGGCCACTGAGGCAAGTTCCTGGGTTAGCTGCACCGAGGAGGGTGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397679.5
CDS CAA 90 bp AAAATTCTGAGCGAGATTCCAGGGCTTCCTGAGGGCGCGTTTAAGTaGCAGTTGCTGAGGAGGCTGCAAGGTGAGCTTGCGTCAGCGAGG +
Preference number: 6 (lower is better)
Translates to: KILSEIPGLPEGAFK*QLLRRLQGELASAR
Trigger: CCTCGCTGACGCAAGCTCACCTTGCAGCCTCCTCAGCAACTGCAACTTAAACGCGCCCTCAGGAAGCCCTGGAATCTCGCTCAGAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS TCA 72 bp GGCCATGACTGGAAGACCCTTCCAGGGTTATGTGCATaGGGGTGGCCTCCTGAAATTGACCCAAGCGTGTCA +
Preference number: 6 (lower is better)
Translates to: GHDWKTLPGLCA*GWPPEIDPSVS
Trigger: TGACACGCTTGGGTCAATTTCAGGAGGCCACCCTCATGCACATAACCCTGGAAGGGTCTTCCAGTCATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475776.1
CDS GCA 72 bp CCTGCATCTCTGCCACTCGGATGCATCTTTGGTGAGTaGCGTGGGAGCAAACCTCCAGGCATCCCAGAATTT +
Preference number: 6 (lower is better)
Translates to: PASLPLGCIFGE*RGSKPPGIPEF
Trigger: AAATTCTGGGATGCCTGGAGGTTTGCTCCCACGGCACTCACCAAAGATGCATCCGAGTGGCAGAGATGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475776.1
CDS CCA 72 bp GGTGTCCAGAGAGCTCCAAGACACCCAAACCTTCCGTaGTTTCCACCTCTGCAAGCTTATGTTCCGCTGAGC +
Preference number: 6 (lower is better)
Translates to: GVQRAPRHPNLP*FPPLQAYVPLS
Trigger: GCTCAGCGGAACATAAGCTTGCAGAGGTGGAAACCACGGAAGGTTTGGGTGTCTTGGAGCTCTCTGGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291691.12
ENST00000397680.5
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS CAA 90 bp TCGTTACTGCTGCAAACAAGCACACGGCCCTCCACGACGAACCTTTaGCAAGTGAAGGCGCACGAACAGGCCCGGAGGACTACAAAGAAA +
Preference number: 6 (lower is better)
Translates to: SLLLQTSTRPSTTNL*QVKAHEQARRTTKK
Trigger: TTTCTTTGTAGTCCTCCGGGCCTGTTCGTGCGCCTTCACTTGCAAAAGGTTCGTCGTGGAGGGCCGTGTGCTTGTTTGCAGCAGTAACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1
CDS TCA 72 bp TACCTCCTGGAGACCAGCCAGAGTACTCTATGGCCATaGAAAGAGCAGAACACCACCAGGTCAAAGTGGCCG +
Preference number: 6 (lower is better)
Translates to: YLLETSQSTLWP*KEQNTTRSKWP
Trigger: CGGCCACTTTGACCTGGTGGTGTTCTGCTCTTTTCATGGCCATAGAGTACTCTGGCTGGTCTCCAGGAGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS GCA 72 bp GCTTCGCAGAGGGTGACGCAAAACAGGAGCGTGGTCTaGACTTGGTTGGGCATTAAACTCCACGTTGATGAG +
Preference number: 6 (lower is better)
Translates to: ASQRVTQNRSVV*TWLGIKLHVDE
Trigger: CTCATCAACGTGGAGTTTAATGCCCAACCAAGTGCAGACCACGCTCCTGTTTTGCGTCACCCTCTGCGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397679.5
ENST00000445935.5
CDS CAA 90 bp GGGAGCAAACCTCCAGGCATCCCAGAATTTCAGGTCCTCCTGGAATaGGGCCCTTACTCAACATTTCCAGTCCTGATGGAAACCTGCACC +
Preference number: 6 (lower is better)
Translates to: GSKPPGIPEFQVLLE*GPYSTFPVLMETCT
Trigger: GGTGCAGGTTTCCATCAGGACTGGAAATGTTGAGTAAGGGCCCAATTCCAGGAGGACCTGAAATTCTGGGATGCCTGGAGGTTTGCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475776.1
CDS CAA 90 bp GCTTCGCAGAGGGTGACGCAAAACAGGAGCGTGGTCTGCACTTGGTaGGGCATTAAACTCCACGTTGATGAGTTAGTCAATCCCACTAGC +
Preference number: 6 (lower is better)
Translates to: ASQRVTQNRSVVCTW*GIKLHVDELVNPTS
Trigger: GCTAGTGGGATTGACTAACTCATCAACGTGGAGTTTAATGCCCAACCAAGTGCAGACCACGCTCCTGTTTTGCGTCACCCTCTGCGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397679.5
ENST00000445935.5
CDS CAA 90 bp ACCTGCAAACTTTCAAAGATGGAAGCACTGGGACAGGGTTCCTCCTaGTGCGGAACTTCAGGAATGAAAGAATCTGTCCTGCAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: TCKLSKMEALGQGSS*CGTSGMKESVLQGW
Trigger: CCAGCCCTGCAGGACAGATTCTTTCATTCCTGAAGTTCCGCACAAGGAGGAACCCTGTCCCAGTGCTTCCATCTTTGAAAGTTTGCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491666.5
CDS CCA 72 bp CAGAGGGTGACGCAAAACAGGAGCGTGGTCTGCACTTaGTTGGGCATTAAACTCCACGTTGATGAGTTAGTC +
Preference number: 6 (lower is better)
Translates to: QRVTQNRSVVCT*LGIKLHVDELV
Trigger: GACTAACTCATCAACGTGGAGTTTAATGCCCAACCAAGTGCAGACCACGCTCCTGTTTTGCGTCACCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397679.5
ENST00000445935.5
CDS CAA 90 bp ACCTGCAAACTTTCAAAGATGGAAGCACTGGGACAGGGTTCCTCCTaGTGCGGAACTTCAGGAATGAAAGAATCTGTCACTCAGGGTGGG +
Preference number: 6 (lower is better)
Translates to: TCKLSKMEALGQGSS*CGTSGMKESVTQGG
Trigger: CCCACCCTGAGTGACAGATTCTTTCATTCCTGAAGTTCCGCACAAGGAGGAACCCTGTCCCAGTGCTTCCATCTTTGAAAGTTTGCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS CAA 90 bp GGAAGACCCTTCCAGGGTTATGTGCATGAGGGTGGCCTCCTGAAATaGACCCAAGCGTGTCAGCTAGTTTCCAGTTGTTTTCTTTTTCCA +
Preference number: 6 (lower is better)
Translates to: GRPFQGYVHEGGLLK*TQACQLVSSCFLFP
Trigger: TGGAAAAAGAAAACAACTGGAAACTAGCTGACACGCTTGGGTCAATTTCAGGAGGCCACCCTCATGCACATAACCCTGGAAGGGTCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475776.1
CDS CAA 72 bp AGGGTGACGCAAAACAGGAGCGTGGTCTGCACTTGGTaGGGCATTAAACTCCACGTTGATGAGTTAGTCAAT +
Preference number: 6 (lower is better)
Translates to: RVTQNRSVVCTW*GIKLHVDELVN
Trigger: ATTGACTAACTCATCAACGTGGAGTTTAATGCCCAACCAAGTGCAGACCACGCTCCTGTTTTGCGTCACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397679.5
ENST00000445935.5
CDS CAA 72 bp CTTTCAAAGATGGAAGCACTGGGACAGGGTTCCTCCTaGTGCGGAACTTCAGGAATGAAAGAATCTGTCCTG +
Preference number: 6 (lower is better)
Translates to: LSKMEALGQGSS*CGTSGMKESVL
Trigger: CAGGACAGATTCTTTCATTCCTGAAGTTCCGCACAAGGAGGAACCCTGTCCCAGTGCTTCCATCTTTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491666.5
CDS CAA 72 bp CTTTCAAAGATGGAAGCACTGGGACAGGGTTCCTCCTaGTGCGGAACTTCAGGAATGAAAGAATCTGTCACT +
Preference number: 6 (lower is better)
Translates to: LSKMEALGQGSS*CGTSGMKESVT
Trigger: AGTGACAGATTCTTTCATTCCTGAAGTTCCGCACAAGGAGGAACCCTGTCCCAGTGCTTCCATCTTTGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397683.5
CDS CCA 72 bp GCCCGGAGGACTACAAAGAAACCCAGAAACCAGACTTaGACACATGAAATAAAGGGGTTAGCTGAAGGAATA +
Preference number: 6 (lower is better)
Translates to: ARRTTKKPRNQT*THEIKGLAEGI
Trigger: TATTCCTTCAGCTAACCCCTTTATTTCATGTGTCCAAGTCTGGTTTCTGGGTTTCTTTGTAGTCCTCCGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291691.12
ENST00000397682.7
ENST00000445935.5
ENST00000475776.1