Pregenerated sensors for C20ORF85 (Homo sapiens)
Ensembl gene IDs: ENSG00000124237Ensembl transcript IDs: ENST00000371168.4
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTCCTCGGGATTCAGGGGAGCTCTTCCTTTCCCTGGCATGGCCCTaGGTGCCTGGTGACCGATATGCAGCACCCCTGGGCAGAACTCCG | + |
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Preference number: 1 (lower is better) Translates to: CPRDSGELFLSLAWP*VPGDRYAAPLGRTP Trigger: CGGAGTTCTGCCCAGGGGTGCTGCATATCGGTCACCAGGCACCCAGGGCCATGCCAGGGAAAGGAAGAGCTCCCCTGAATCCCGAGGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| 3UTR TCA 90 bp | AATGGGTGTGGACGTGAACATTCTGGAAGGGTGACGCTGATGACTTaGGAATGTCTAAGGCACACTTTGTGTTCTTTGCAACATCCCATG | + |
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Preference number: 1 (lower is better) Translates to: NGCGREHSGRVTLMT*ECLRHTLCSLQHPM Trigger: CATGGGATGTTGCAAAGAACACAAAGTGTGCCTTAGACATTCTCAAGTCATCAGCGTCACCCTTCCAGAATGTTCACGTCCACACCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| 3UTR-3UTR CCA 90 bp | TTGTGTTCTTTGCAACATCCCATGAGCAAGTACGCAGGGGACTGTGTCCTCGGGGATATGCAGCACCCCTaGGCAGAACTCCGTCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: LCSLQHPMSKYAGDCVLGDMQHP*AELRLD Trigger: ATCCAGACGGAGTTCTGCCCAGGGGTGCTGCATATC...CCCGAGGACACAGTCCCCTGCGTACTTGCTCATGGGATGTTGCAAAGAACACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR CCA 90 bp | CCCTGGGTGCCTGGTGACCGATATGCAGCACCCCTGGGCAGAACTCCGTCTGGAGCGCCCCGCAAGCTCTaGCCCTGGGCTCAGCGTCTC | + |
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Preference number: 4 (lower is better) Translates to: PWVPGDRYAAPLGRTPSGAPRKL*PWAQRL Trigger: GAGACGCTGAGCCCAGGGCCAGAGCTTGCGGGGCGC...TCCAGACGGAGTTCTGCCCAGGGGTGCTGCATATCGGTCACCAGGCACCCAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR TCA 90 bp | CCCTGGGTGCCTGGTGACCGATATGCAGCACCCCTGGGCAGAACTCCGTCTGGAGAGGTTTCTGCGCCATaGGGCCTGGGGGCTCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: PWVPGDRYAAPLGRTPSGEVSAP*GLGALC Trigger: GCACAGAGCCCCCAGGCCTCATGGCGCAGAAACCTC...TCCAGACGGAGTTCTGCCCAGGGGTGCTGCATATCGGTCACCAGGCACCCAGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR TCA 90 bp | CCCTGGGTGCCTGGTGACCGATATGCAGCACCCCTGGGCAGAACTCCGTCTGGAGCCCTGGGTGCCTGGTaGCCGATATGCAGCACCCCT | + |
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Preference number: 4 (lower is better) Translates to: PWVPGDRYAAPLGRTPSGALGAW*PICSTP Trigger: AGGGGTGCTGCATATCGGTCACCAGGCACCCAGGGC...TCCAGACGGAGTTCTGCCCAGGGGTGCTGCATATCGGTCACCAGGCACCCAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR GCA 90 bp | CCCTGGGTGCCTGGTGACCGATATGCAGCACCCCTGGGCAGAACTCCGTCTGGAGTGCTGAGAGGTTTCTaGGCCATGAGGCCTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: PWVPGDRYAAPLGRTPSGVLRGF*AMRPGG Trigger: GCCCCCAGGCCTCATGGCGCAGAAACCTCTCAGCAC...TCCAGACGGAGTTCTGCCCAGGGGTGCTGCATATCGGTCACCAGGCACCCAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR GCA 90 bp | CCCTGGGTGCCTGGTGACCGATATGCAGCACCCCTGGGCAGAACTCCGTCTGGAGACCCACAAGGTTCATaGGTTCAGCCGCCGCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: PWVPGDRYAAPLGRTPSGDPQGS*VQPPRC Trigger: GCACCGCGGCGGCTGAACGCATGAACCTTGTGGGTC...TCCAGACGGAGTTCTGCCCAGGGGTGCTGCATATCGGTCACCAGGCACCCAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR GCA 90 bp | CCCTGGGTGCCTGGTGACCGATATGCAGCACCCCTGGGCAGAACTCCGTCTGGAGGGTCACCGGCCGGATaGGGAAACGCTCAGGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: PWVPGDRYAAPLGRTPSGGSPAG*GNAQEA Trigger: AGCTTCCTGAGCGTTTCCGCATCCGGCCGGTGACCC...TCCAGACGGAGTTCTGCCCAGGGGTGCTGCATATCGGTCACCAGGCACCCAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR TCA 90 bp | CCCTGGGTGCCTGGTGACCGATATGCAGCACCCCTGGGCAGAACTCCGTCTGGACAGATCTCCAGCCGATaGAGCCCTGGGTGGTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: PWVPGDRYAAPLGRTPSGQISSR*SPGWSV Trigger: CACAGACCACCCAGGGCTTCATCGGCTGGAGATCTG...TCCAGACGGAGTTCTGCCCAGGGGTGCTGCATATCGGTCACCAGGCACCCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR GCA 90 bp | CCCTGGGTGCCTGGTGACCGATATGCAGCACCCCTGGGCAGAACTCCGTCTGGATCCGTCTGGATTCAGTaGACGCCCTGCTTGGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: PWVPGDRYAAPLGRTPSGSVWIQ*TPCLGQ Trigger: CTGGCCCAAGCAGGGCGTGCACTGAATCCAGACGGA...TCCAGACGGAGTTCTGCCCAGGGGTGCTGCATATCGGTCACCAGGCACCCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR CCA 90 bp | CCCTGGGTGCCTGGTGACCGATATGCAGCACCCCTGGGCAGAACTCCGTCTGGAGATGTACTTCTCCACTaGGGTCACCGGCCGGATGCG | + |
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Preference number: 4 (lower is better) Translates to: PWVPGDRYAAPLGRTPSGDVLLH*GHRPDA Trigger: CGCATCCGGCCGGTGACCCCAGTGGAGAAGTACATC...TCCAGACGGAGTTCTGCCCAGGGGTGCTGCATATCGGTCACCAGGCACCCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR CCA 90 bp | CCCTGGGTGCCTGGTGACCGATATGCAGCACCCCTGGGCAGAACTCCGTCTGGAAGCTCTTCCTTTCCCTaGCATGGCCCTGGGTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: PWVPGDRYAAPLGRTPSGSSSFP*HGPGCL Trigger: CAGGCACCCAGGGCCATGCCAGGGAAAGGAAGAGCT...TCCAGACGGAGTTCTGCCCAGGGGTGCTGCATATCGGTCACCAGGCACCCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR GCA 90 bp | CCCTGGGTGCCTGGTGACCGATATGCAGCACCCCTGGGCAGAACTCCGTCTGGAGGGCCAGTTCTGCCGTaGTTCCGATTCAGCCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: PWVPGDRYAAPLGRTPSGGPVLP*FRFSLQ Trigger: CTGAAGGCTGAATCGGAAGCACGGCAGAACTGGCCC...TCCAGACGGAGTTCTGCCCAGGGGTGCTGCATATCGGTCACCAGGCACCCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR GCA 90 bp | CCCTGGGTGCCTGGTGACCGATATGCAGCACCCCTGGGCAGAACTCCGTCTGGAATTCAGTGCACGCCCTaGTTGGGCCAGCACAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: PWVPGDRYAAPLGRTPSGIQCTP*LGQHSS Trigger: AGAGCTGTGCTGGCCCAAGCAGGGCGTGCACTGAAT...TCCAGACGGAGTTCTGCCCAGGGGTGCTGCATATCGGTCACCAGGCACCCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR CCA 90 bp | TTGTGTTCTTTGCAACATCCCATGAGCAAGTACGCAGGGGACTGTGTCCTCGGGCTGCGCCATGAGGCCTaGGGGCTCTGTGCGCCCCGC | + |
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Preference number: 4 (lower is better) Translates to: LCSLQHPMSKYAGDCVLGLRHEA*GLCAPR Trigger: GCGGGGCGCACAGAGCCCCCAGGCCTCATGGCGCAG...CCCGAGGACACAGTCCCCTGCGTACTTGCTCATGGGATGTTGCAAAGAACACAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR CCA 90 bp | CCCTGGGTGCCTGGTGACCGATATGCAGCACCCCTGGGCAGAACTCCGTCTGGAGATATGCAGCACCCCTaGGCAGAACTCCGTCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: PWVPGDRYAAPLGRTPSGDMQHP*AELRLD Trigger: ATCCAGACGGAGTTCTGCCCAGGGGTGCTGCATATC...TCCAGACGGAGTTCTGCCCAGGGGTGCTGCATATCGGTCACCAGGCACCCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR TCA 90 bp | CCCTGGGTGCCTGGTGACCGATATGCAGCACCCCTGGGCAGAACTCCGTCTGGAGGGATGGAAAGACCTTaGTGTACTTCTCCACTGGGG | + |
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Preference number: 4 (lower is better) Translates to: PWVPGDRYAAPLGRTPSGGMERP*CTSPLG Trigger: CCCCAGTGGAGAAGTACATCAAGGTCTTTCCATCCC...TCCAGACGGAGTTCTGCCCAGGGGTGCTGCATATCGGTCACCAGGCACCCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR TCA 90 bp | CCCTGGGTGCCTGGTGACCGATATGCAGCACCCCTGGGCAGAACTCCGTCTGGACTTTGCAACATCCCATaGGCAAGTACGCAGGGGACT | + |
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Preference number: 4 (lower is better) Translates to: PWVPGDRYAAPLGRTPSGLCNIP*ASTQGT Trigger: AGTCCCCTGCGTACTTGCTCATGGGATGTTGCAAAG...TCCAGACGGAGTTCTGCCCAGGGGTGCTGCATATCGGTCACCAGGCACCCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR TCA 90 bp | CCCTGGGTGCCTGGTGACCGATATGCAGCACCCCTGGGCAGAACTCCGTCTGGAGAATGGGTGTGGACGTaGACATTCTGGAAGGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: PWVPGDRYAAPLGRTPSGEWVWT*TFWKGD Trigger: GTCACCCTTCCAGAATGTTCACGTCCACACCCATTC...TCCAGACGGAGTTCTGCCCAGGGGTGCTGCATATCGGTCACCAGGCACCCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR GCA 90 bp | CCCTGGGTGCCTGGTGACCGATATGCAGCACCCCTGGGCAGAACTCCGTCTGGACCAGCACAGCTCTCGTaGAAAAGCACCTTTGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: PWVPGDRYAAPLGRTPSGPAQLS*KSTFAA Trigger: AGCTGCAAAGGTGCTTTTGCACGAGAGCTGTGCTGG...TCCAGACGGAGTTCTGCCCAGGGGTGCTGCATATCGGTCACCAGGCACCCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR CCA 90 bp | TTGTGTTCTTTGCAACATCCCATGAGCAAGTACGCAGGGGACTGTGTCCTCGGGCGCAAGCTCTGGCCCTaGGCTCAGCGTCTCGCGTCT | + |
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Preference number: 4 (lower is better) Translates to: LCSLQHPMSKYAGDCVLGRKLWP*AQRLAS Trigger: AGACGCGAGACGCTGAGCCCAGGGCCAGAGCTTGCG...CCCGAGGACACAGTCCCCTGCGTACTTGCTCATGGGATGTTGCAAAGAACACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR CCA 90 bp | TTGTGTTCTTTGCAACATCCCATGAGCAAGTACGCAGGGGACTGTGTCCTCGGGCAGCCGATGAAGCCCTaGGTGGTCTGTGGGACTGGG | + |
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Preference number: 4 (lower is better) Translates to: LCSLQHPMSKYAGDCVLGQPMKP*VVCGTG Trigger: CCCAGTCCCACAGACCACCCAGGGCTTCATCGGCTG...CCCGAGGACACAGTCCCCTGCGTACTTGCTCATGGGATGTTGCAAAGAACACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR CCA 90 bp | TTGTGTTCTTTGCAACATCCCATGAGCAAGTACGCAGGGGACTGTGTCCTCGGGAGTGCACGCCCTGCTTaGGCCAGCACAGCTCTCGTG | + |
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Preference number: 4 (lower is better) Translates to: LCSLQHPMSKYAGDCVLGSARPA*ASTALV Trigger: CACGAGAGCTGTGCTGGCCCAAGCAGGGCGTGCACT...CCCGAGGACACAGTCCCCTGCGTACTTGCTCATGGGATGTTGCAAAGAACACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR TCA 90 bp | CCCTGGGTGCCTGGTGACCGATATGCAGCACCCCTGGGCAGAACTCCGTCTGGAGATCTTCTTCACACTTaGTCAACTCCTCAAAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: PWVPGDRYAAPLGRTPSGDLLHT*STPQKG Trigger: CCCCTTTTGAGGAGTTGATCAAGTGTGAAGAAGATC...TCCAGACGGAGTTCTGCCCAGGGGTGCTGCATATCGGTCACCAGGCACCCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR CCA 90 bp | TTGTGTTCTTTGCAACATCCCATGAGCAAGTACGCAGGGGACTGTGTCCTCGGGGGGCAGAACTCCGTCTaGATTCAGTGCACGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LCSLQHPMSKYAGDCVLGGQNSV*IQCTPC Trigger: GCAGGGCGTGCACTGAATCCAGACGGAGTTCTGCCC...CCCGAGGACACAGTCCCCTGCGTACTTGCTCATGGGATGTTGCAAAGAACACAA 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR GCA 90 bp | TTGTGTTCTTTGCAACATCCCATGAGCAAGTACGCAGGGGACTGTGTCCTCGGGTTCTGGGGCCAGTTCTaGCGTGCTTCCGATTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LCSLQHPMSKYAGDCVLGFWGQF*RASDSA Trigger: GGCTGAATCGGAAGCACGGCAGAACTGGCCCCAGAA...CCCGAGGACACAGTCCCCTGCGTACTTGCTCATGGGATGTTGCAAAGAACACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR CCA 90 bp | TTGTGTTCTTTGCAACATCCCATGAGCAAGTACGCAGGGGACTGTGTCCTCGGGGCACTTGTTCAGGCCTaGCACTGCAGATCTCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LCSLQHPMSKYAGDCVLGALVQA*HCRSPA Trigger: GGCTGGAGATCTGCAGTGCCAGGCCTGAACAAGTGC...CCCGAGGACACAGTCCCCTGCGTACTTGCTCATGGGATGTTGCAAAGAACACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR GCA 90 bp | TTGTGTTCTTTGCAACATCCCATGAGCAAGTACGCAGGGGACTGTGTCCTCGGGGTTCAGGCCTGGCACTaGAGATCTCCAGCCGATGAA | + |
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Preference number: 4 (lower is better) Translates to: LCSLQHPMSKYAGDCVLGVQAWH*RSPADE Trigger: TTCATCGGCTGGAGATCTGCAGTGCCAGGCCTGAAC...CCCGAGGACACAGTCCCCTGCGTACTTGCTCATGGGATGTTGCAAAGAACACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR CCA 90 bp | TTGTGTTCTTTGCAACATCCCATGAGCAAGTACGCAGGGGACTGTGTCCTCGGGAAAAACCCCCAGTTCTaGGGCCAGTTCTGCCGTGCT | + |
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Preference number: 4 (lower is better) Translates to: LCSLQHPMSKYAGDCVLGKNPQF*GQFCRA Trigger: AGCACGGCAGAACTGGCCCCAGAACTGGGGGTTTTT...CCCGAGGACACAGTCCCCTGCGTACTTGCTCATGGGATGTTGCAAAGAACACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR TCA 90 bp | TTGTGTTCTTTGCAACATCCCATGAGCAAGTACGCAGGGGACTGTGTCCTCGGGCACCTTTGCAGCTTCTaGTCGCATCGTCGAGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: LCSLQHPMSKYAGDCVLGHLCSF*SHRRAL Trigger: TAGAGCTCGACGATGCGATCAGAAGCTGCAAAGGTG...CCCGAGGACACAGTCCCCTGCGTACTTGCTCATGGGATGTTGCAAAGAACACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR CCA 90 bp | TTGTGTTCTTTGCAACATCCCATGAGCAAGTACGCAGGGGACTGTGTCCTCGGGCTCGATTTTGGGCTTTaGGGTGGGGAGATCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LCSLQHPMSKYAGDCVLGLDFGL*GGEIFF Trigger: GAAGAAGATCTCCCCACCCCAAAGCCCAAAATCGAG...CCCGAGGACACAGTCCCCTGCGTACTTGCTCATGGGATGTTGCAAAGAACACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR TCA 90 bp | TTGTGTTCTTTGCAACATCCCATGAGCAAGTACGCAGGGGACTGTGTCCTCGGGGTGACGCTGATGACTTaGGAATGTCTAAGGCACACT | + |
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Preference number: 4 (lower is better) Translates to: LCSLQHPMSKYAGDCVLGVTLMT*ECLRHT Trigger: AGTGTGCCTTAGACATTCTCAAGTCATCAGCGTCAC...CCCGAGGACACAGTCCCCTGCGTACTTGCTCATGGGATGTTGCAAAGAACACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS CCA 90 bp | GCGTTCAGCCGCCGCGGTGCTGAGAGGTTTCTGCGCCATGAGGCCTaGGGGCTCTGTGCGCCCCGCAAGCTCTGGCCCTGGGCTCAGCGT | + |
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Preference number: 5 (lower is better) Translates to: AFSRRGAERFLRHEA*GLCAPRKLWPWAQR Trigger: ACGCTGAGCCCAGGGCCAGAGCTTGCGGGGCGCACAGAGCCCCCAGGCCTCATGGCGCAGAAACCTCTCAGCACCGCGGCGGCTGAACGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS GCA 90 bp | CCCACAAGGTTCATGCGTTCAGCCGCCGCGGTGCTGAGAGGTTTCTaGGCCATGAGGCCTGGGGGCTCTGTGCGCCCCGCAAGCTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: PTRFMRSAAAVLRGF*AMRPGGSVRPASSG Trigger: GCCAGAGCTTGCGGGGCGCACAGAGCCCCCAGGCCTCATGGCGCAGAAACCTCTCAGCACCGCGGCGGCTGAACGCATGAACCTTGTGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS TCA 90 bp | TTCAGGGGAGCTCTTCCTTTCCCTGGCATGGCCCTGGGTGCCTGGTaGCCGATATGCAGCACCCCTGGGCAGAACTCCGTCTGGATTCAG | + |
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Preference number: 5 (lower is better) Translates to: FRGALPFPGMALGAW*PICSTPGQNSVWIQ Trigger: CTGAATCCAGACGGAGTTCTGCCCAGGGGTGCTGCATATCGGTCACCAGGCACCCAGGGCCATGCCAGGGAAAGGAAGAGCTCCCCTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS GCA 90 bp | TGCAGCACCCCTGGGCAGAACTCCGTCTGGATTCAGTGCACGCCCTaGTTGGGCCAGCACAGCTCTCGTGCAAAAGCACCTTTGCAGCTT | + |
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Preference number: 5 (lower is better) Translates to: CSTPGQNSVWIQCTP*LGQHSSRAKAPLQL Trigger: AAGCTGCAAAGGTGCTTTTGCACGAGAGCTGTGCTGGCCCAAGCAGGGCGTGCACTGAATCCAGACGGAGTTCTGCCCAGGGGTGCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR CAA 90 bp | CCCTGGGTGCCTGGTGACCGATATGCAGCACCCCTGGGCAGAACTCCGTCTGGAGGGGATGGAAAGACCTaGATGTACTTCTCCACTGGG | + |
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Preference number: 5 (lower is better) Translates to: PWVPGDRYAAPLGRTPSGGDGKT*MYFSTG Trigger: CCCAGTGGAGAAGTACATCAAGGTCTTTCCATCCCC...TCCAGACGGAGTTCTGCCCAGGGGTGCTGCATATCGGTCACCAGGCACCCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR CAA 90 bp | TTGTGTTCTTTGCAACATCCCATGAGCAAGTACGCAGGGGACTGTGTCCTCGGGCAGTGCACGCCCTGCTaGGGCCAGCACAGCTCTCGT | + |
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Preference number: 5 (lower is better) Translates to: LCSLQHPMSKYAGDCVLGQCTPC*GQHSSR Trigger: ACGAGAGCTGTGCTGGCCCAAGCAGGGCGTGCACTG...CCCGAGGACACAGTCCCCTGCGTACTTGCTCATGGGATGTTGCAAAGAACACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR CAA 90 bp | CCCTGGGTGCCTGGTGACCGATATGCAGCACCCCTGGGCAGAACTCCGTCTGGAGGTGACGCTGATGACTaGAGAATGTCTAAGGCACAC | + |
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Preference number: 5 (lower is better) Translates to: PWVPGDRYAAPLGRTPSGGDADD*RMSKAH Trigger: GTGTGCCTTAGACATTCTCAAGTCATCAGCGTCACC...TCCAGACGGAGTTCTGCCCAGGGGTGCTGCATATCGGTCACCAGGCACCCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS TCA 90 bp | GCTTGGGCCAGCACAGCTCTCGTGCAAAAGCACCTTTGCAGCTTCTaGTCGCATCGTCGAGCTCTAGGCACTTGTTCAGGCCTGGCACTG | + |
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Preference number: 5 (lower is better) Translates to: AWASTALVQKHLCSF*SHRRALGTCSGLAL Trigger: CAGTGCCAGGCCTGAACAAGTGCCTAGAGCTCGACGATGCGATCAGAAGCTGCAAAGGTGCTTTTGCACGAGAGCTGTGCTGGCCCAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR CAA 90 bp | CCCTGGGTGCCTGGTGACCGATATGCAGCACCCCTGGGCAGAACTCCGTCTGGAAGATCTTCTTCACACTaGATCAACTCCTCAAAAGGG | + |
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Preference number: 5 (lower is better) Translates to: PWVPGDRYAAPLGRTPSGRSSSH*INSSKG Trigger: CCCTTTTGAGGAGTTGATCAAGTGTGAAGAAGATCT...TCCAGACGGAGTTCTGCCCAGGGGTGCTGCATATCGGTCACCAGGCACCCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR CAA 90 bp | TTGTGTTCTTTGCAACATCCCATGAGCAAGTACGCAGGGGACTGTGTCCTCGGGTCGAGCTCTAGGCACTaGTTCAGGCCTGGCACTGCA | + |
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Preference number: 5 (lower is better) Translates to: LCSLQHPMSKYAGDCVLGSSSRH*FRPGTA Trigger: TGCAGTGCCAGGCCTGAACAAGTGCCTAGAGCTCGA...CCCGAGGACACAGTCCCCTGCGTACTTGCTCATGGGATGTTGCAAAGAACACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR CAA 90 bp | TTGTGTTCTTTGCAACATCCCATGAGCAAGTACGCAGGGGACTGTGTCCTCGGGTCAGGAAGCTCGATTTaGGGCTTTGGGGTGGGGAGA | + |
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Preference number: 5 (lower is better) Translates to: LCSLQHPMSKYAGDCVLGSGSSI*GFGVGR Trigger: TCTCCCCACCCCAAAGCCCAAAATCGAGCTTCCTGA...CCCGAGGACACAGTCCCCTGCGTACTTGCTCATGGGATGTTGCAAAGAACACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR CAA 90 bp | TTGTGTTCTTTGCAACATCCCATGAGCAAGTACGCAGGGGACTGTGTCCTCGGGCGTGCAAAAGCACCTTaGCAGCTTCTGATCGCATCG | + |
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Preference number: 5 (lower is better) Translates to: LCSLQHPMSKYAGDCVLGRAKAP*QLLIAS Trigger: CGATGCGATCAGAAGCTGCAAAGGTGCTTTTGCACG...CCCGAGGACACAGTCCCCTGCGTACTTGCTCATGGGATGTTGCAAAGAACACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS-3UTR CAA 90 bp | TTGTGTTCTTTGCAACATCCCATGAGCAAGTACGCAGGGGACTGTGTCCTCGGGTGTCTAAGGCACACTTaGTGTTCTTTGCAACATCCC | + |
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Preference number: 5 (lower is better) Translates to: LCSLQHPMSKYAGDCVLGCLRHT*CSLQHP Trigger: GGGATGTTGCAAAGAACACAAAGTGTGCCTTAGACA...CCCGAGGACACAGTCCCCTGCGTACTTGCTCATGGGATGTTGCAAAGAACACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS CCA 72 bp | CGCCGCGGTGCTGAGAGGTTTCTGCGCCATGAGGCCTaGGGGCTCTGTGCGCCCCGCAAGCTCTGGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: RRGAERFLRHEA*GLCAPRKLWPW Trigger: CCAGGGCCAGAGCTTGCGGGGCGCACAGAGCCCCCAGGCCTCATGGCGCAGAAACCTCTCAGCACCGCGGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS GCA 72 bp | TTCATGCGTTCAGCCGCCGCGGTGCTGAGAGGTTTCTaGGCCATGAGGCCTGGGGGCTCTGTGCGCCCCGCA | + |
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Preference number: 6 (lower is better) Translates to: FMRSAAAVLRGF*AMRPGGSVRPA Trigger: TGCGGGGCGCACAGAGCCCCCAGGCCTCATGGCGCAGAAACCTCTCAGCACCGCGGCGGCTGAACGCATGAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS CCA 72 bp | GGCCCTGGGTGCCTGGTGACCGATATGCAGCACCCCTaGGCAGAACTCCGTCTGGATTCAGTGCACGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: GPGCLVTDMQHP*AELRLDSVHAL Trigger: CAGGGCGTGCACTGAATCCAGACGGAGTTCTGCCCAGGGGTGCTGCATATCGGTCACCAGGCACCCAGGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS GCA 72 bp | TGCAGCACCCCTGGGCAGAACTCCGTCTGGATTCAGTaGACGCCCTGCTTGGGCCAGCACAGCTCTCGTGCA | + |
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Preference number: 6 (lower is better) Translates to: CSTPGQNSVWIQ*TPCLGQHSSRA Trigger: TGCACGAGAGCTGTGCTGGCCCAAGCAGGGCGTGCACTGAATCCAGACGGAGTTCTGCCCAGGGGTGCTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS GCA 72 bp | CCTGGGCAGAACTCCGTCTGGATTCAGTGCACGCCCTaGTTGGGCCAGCACAGCTCTCGTGCAAAAGCACCT | + |
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Preference number: 6 (lower is better) Translates to: PGQNSVWIQCTP*LGQHSSRAKAP Trigger: AGGTGCTTTTGCACGAGAGCTGTGCTGGCCCAAGCAGGGCGTGCACTGAATCCAGACGGAGTTCTGCCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS CAA 90 bp | AGCACCCCTGGGCAGAACTCCGTCTGGATTCAGTGCACGCCCTGCTaGGGCCAGCACAGCTCTCGTGCAAAAGCACCTTTGCAGCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: STPGQNSVWIQCTPC*GQHSSRAKAPLQLL Trigger: CAGAAGCTGCAAAGGTGCTTTTGCACGAGAGCTGTGCTGGCCCAAGCAGGGCGTGCACTGAATCCAGACGGAGTTCTGCCCAGGGGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS CCA 72 bp | GGCAGAACTCCGTCTGGATTCAGTGCACGCCCTGCTTaGGCCAGCACAGCTCTCGTGCAAAAGCACCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: GRTPSGFSARPA*ASTALVQKHLC Trigger: GCAAAGGTGCTTTTGCACGAGAGCTGTGCTGGCCCAAGCAGGGCGTGCACTGAATCCAGACGGAGTTCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS CAA 72 bp | GGGCAGAACTCCGTCTGGATTCAGTGCACGCCCTGCTaGGGCCAGCACAGCTCTCGTGCAAAAGCACCTTTG | + |
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Preference number: 6 (lower is better) Translates to: GQNSVWIQCTPC*GQHSSRAKAPL Trigger: CAAAGGTGCTTTTGCACGAGAGCTGTGCTGGCCCAAGCAGGGCGTGCACTGAATCCAGACGGAGTTCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS CAA 90 bp | TGCACGCCCTGCTTGGGCCAGCACAGCTCTCGTGCAAAAGCACCTTaGCAGCTTCTGATCGCATCGTCGAGCTCTAGGCACTTGTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: CTPCLGQHSSRAKAP*QLLIASSSSRHLFR Trigger: CCTGAACAAGTGCCTAGAGCTCGACGATGCGATCAGAAGCTGCAAAGGTGCTTTTGCACGAGAGCTGTGCTGGCCCAAGCAGGGCGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS CAA 90 bp | AAAGCACCTTTGCAGCTTCTGATCGCATCGTCGAGCTCTAGGCACTaGTTCAGGCCTGGCACTGCAGATCTCCAGCCGATGAAGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: KAPLQLLIASSSSRH*FRPGTADLQPMKPW Trigger: CCAGGGCTTCATCGGCTGGAGATCTGCAGTGCCAGGCCTGAACAAGTGCCTAGAGCTCGACGATGCGATCAGAAGCTGCAAAGGTGCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS CAA 72 bp | TTGCAGCTTCTGATCGCATCGTCGAGCTCTAGGCACTaGTTCAGGCCTGGCACTGCAGATCTCCAGCCGATG | + |
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Preference number: 6 (lower is better) Translates to: LQLLIASSSSRH*FRPGTADLQPM Trigger: CATCGGCTGGAGATCTGCAGTGCCAGGCCTGAACAAGTGCCTAGAGCTCGACGATGCGATCAGAAGCTGCAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS CAA 72 bp | TGCTTGGGCCAGCACAGCTCTCGTGCAAAAGCACCTTaGCAGCTTCTGATCGCATCGTCGAGCTCTAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: CLGQHSSRAKAP*QLLIASSSSRH Trigger: GTGCCTAGAGCTCGACGATGCGATCAGAAGCTGCAAAGGTGCTTTTGCACGAGAGCTGTGCTGGCCCAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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| CDS TCA 72 bp | AGCACAGCTCTCGTGCAAAAGCACCTTTGCAGCTTCTaGTCGCATCGTCGAGCTCTAGGCACTTGTTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: STALVQKHLCSF*SHRRALGTCSG Trigger: GCCTGAACAAGTGCCTAGAGCTCGACGATGCGATCAGAAGCTGCAAAGGTGCTTTTGCACGAGAGCTGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371168.4 |
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