RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C1RL (Homo sapiens)

Ensembl gene IDs: ENSG00000139178

Ensembl transcript IDs: ENST00000266542.9, ENST00000534950.1, ENST00000534969.1, ENST00000534969.2, ENST00000537833.5, ENST00000537833.6, ENST00000539803.5, ENST00000539927.1, ENST00000543933.5, ENST00000543941.1, ENST00000544702.5, ENST00000545280.5, ENST00000545337.1, ENST00000671738.1, ENST00000671752.1, ENST00000672115.1, ENST00000672174.1, ENST00000672447.1, ENST00000672500.1, ENST00000672727.1, ENST00000672753.1, ENST00000672949.1, ENST00000673022.1, ENST00000673569.1

Found 737 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCAAGGCCCGTGTTGAATCCTGGGCTCTCCCGACAGCGTCTTCGTaGACTGTGTGCAGAGGGAGCCCGCGTCATGCACAGCAGGGAGGG +
Preference number: 1 (lower is better)
Translates to: LKARVESWALPTASS*TVCRGSPRHAQQGG
Trigger: CCCTCCCTGCTGTGCATGACGCGGGCTCCCTCTGCACACAGTGCACGAAGACGCTGTCGGGAGAGCCCAGGATTCAACACGGGCCTTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
3UTR CCA 90 bp TGCGGTAGAGGGTCTCATTATCGGGCAGACAGACCGGGAGGACGTTaGGGCCCAGGGGGATGCTGTGCTGCAGCTCCAGGAGGGCGATGT +
Preference number: 1 (lower is better)
Translates to: CGRGSHYRADRPGGR*GPGGCCAAAPGGRC
Trigger: ACATCGCCCTCCTGGAGCTGCAGCACAGCATCCCCCTGGGCCCCAACGTCCTCCCGGTCTGTCTGCCCGATAATGAGACCCTCTACCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
3UTR GCA 90 bp GAGCGGTCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTaGCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGAT +
Preference number: 1 (lower is better)
Translates to: ERSVGLCFLSGMGRA*RVGVSLAVAWCNSD
Trigger: ATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGACCGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR GCA 90 bp CGTGTTGAATCCTGGGCTCTCCCGACAGCGTCTTCGTGCACTGTGTaGAGAGGGAGCCCGCGTCATGCACAGCAGGGAGGGGAGGGTTTT +
Preference number: 1 (lower is better)
Translates to: RVESWALPTASSCTV*RGSPRHAQQGGEGF
Trigger: AAAACCCTCCCCTCCCTGCTGTGCATGACGCGGGCTCCCTCTGCACACAGTGCACGAAGACGCTGTCGGGAGAGCCCAGGATTCAACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
3UTR GCA 90 bp TGGCCACCCAGTGATGGGCATGATTGTCCCATACCACATAGACGCTaGCACTGTCCCCCTGGCAGACACTGTGCCTTTGCGTCTCATCCC +
Preference number: 1 (lower is better)
Translates to: WPPSDGHDCPIPHRR*HCPPGRHCAFASHP
Trigger: GGGATGAGACGCAAAGGCACAGTGTCTGCCAGGGGGACAGTGGCAGCGTCTATGTGGTATGGGACAATCATGCCCATCACTGGGTGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
3UTR GCA 90 bp CCTCCCCAAATAACTTCTGAGGGATGGGAATGGAGCCTCCTGCCCTaGAGAACAGGGCCGGCACCAGGAGGTACAAGAGCCACATTTCTC +
Preference number: 1 (lower is better)
Translates to: PPQITSEGWEWSLLP*RTGPAPGGTRATFL
Trigger: GAGAAATGTGGCTCTTGTACCTCCTGGTGCCGGCCCTGTTCTGCAGGGCAGGAGGCTCCATTCCCATCCCTCAGAAGTTATTTGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
3UTR GCA 90 bp TGTCAGAAAACACCTCGGGTCTCTGTCTCTTTTGGAGCCAGGCGTTaGAGGCCTCCCTGGGAGCTACAGGCAGCCTCGAGTACTTCAGCT +
Preference number: 1 (lower is better)
Translates to: CQKTPRVSVSFGARR*RPPWELQAASSTSA
Trigger: AGCTGAAGTACTCGAGGCTGCCTGTAGCTCCCAGGGAGGCCTGCAACGCCTGGCTCCAAAAGAGACAGAGACCCGAGGTGTTTTCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
3UTR CCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTaGGACTTGGGCAAGTCCCTTTATCCCCTGAGCCTCAGTTTCCTC +
Preference number: 1 (lower is better)
Translates to: QHTGKSTVSAVTHQL*DLGKSLYPLSLSFL
Trigger: GAGGAAACTGAGGCTCAGGGGATAAAGGGACTTGCCCAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR CCA 90 bp CAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCACCTaGCTTCTGCAGGAGATGGGGCCATTAGGAAAGTGTGAGCTAGAG +
Preference number: 1 (lower is better)
Translates to: QVGCLQELQSSAGLT*LLQEMGPLGKCELE
Trigger: CTCTAGCTCACACTTTCCTAATGGCCCCATCTCCTGCAGAAGCCAGGTGAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR CCA 90 bp ACACAGAACATATTGTCAGAAAACACCTCGGGTCTCTGTCTCTTTTaGAGCCAGGCGTTGCAGGCCTCCCTGGGAGCTACAGGCAGCCTC +
Preference number: 1 (lower is better)
Translates to: TQNILSENTSGLCLF*SQALQASLGATGSL
Trigger: GAGGCTGCCTGTAGCTCCCAGGGAGGCCTGCAACGCCTGGCTCCAAAAGAGACAGAGACCCGAGGTGTTTTCTGACAATATGTTCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
3UTR TCA 90 bp GAAGTAGGGGAAGGCGGTTCTAAGGACATTCAAGGCGAAAGTTGTTaGGATGTACAGGCTTCCCGGGGCCTAGTGCATGAGCACAGGGAG +
Preference number: 1 (lower is better)
Translates to: EVGEGGSKDIQGESC*DVQASRGLVHEHRE
Trigger: CTCCCTGTGCTCATGCACTAGGCCCCGGGAAGCCTGTACATCTCAACAACTTTCGCCTTGAATGTCCTTAGAACCGCCTTCCCCTACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR GCA 90 bp GCAGTGACCACATCATCAGTAGTTAGACAGCAGGCACACAGAAGGTaGAAGATCCACCAACGCTTGGAGGGTTTCTCCAGCAGGCCTGTG +
Preference number: 1 (lower is better)
Translates to: AVTTSSVVRQQAHRR*KIHQRLEGFSSRPV
Trigger: CACAGGCCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTGTCTAACTACTGATGATGTGGTCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539803.5
ENST00000545280.5
ENST00000671738.1
ENST00000672949.1
3UTR TCA 90 bp TGGGCTCACCTGGCTTCTGCAGGAGATGGGGCCATTAGGAAAGTGTaGGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGA +
Preference number: 1 (lower is better)
Translates to: WAHLASAGDGAIRKV*ARGYHFRRSRNSQG
Trigger: TCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCCTAATGGCCCCATCTCCTGCAGAAGCCAGGTGAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR CCA 90 bp GTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTaGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTT +
Preference number: 1 (lower is better)
Translates to: VTQQVRGGLRSIAAH*EEHSLCSHTPAVGL
Trigger: AAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR CCA 90 bp CCGGTGAGATGTAACTTGGTGCTGCTGCTGTTGAAGACAGTTTGGTaGTTCCAGGCATACACTGAAGAACCTCCTCCCCATCCTGTCTGT +
Preference number: 1 (lower is better)
Translates to: PVRCNLVLLLLKTVW*FQAYTEEPPPHPVC
Trigger: ACAGACAGGATGGGGAGGAGGTTCTTCAGTGTATGCCTGGAACCACCAAACTGTCTTCAACAGCAGCAGCACCAAGTTACATCTCACCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537833.5
ENST00000673569.1
3UTR CCA 90 bp TTTAAAAATGAGATGATCTGCAAACACTGGGCCTGTAAATCTGCATaGAAACAACCGCTGGGGGCTCAGCTACGGCTGTCTCTTAATAGG +
Preference number: 1 (lower is better)
Translates to: FKNEMICKHWACKSA*KQPLGAQLRLSLNR
Trigger: CCTATTAAGAGACAGCCGTAGCTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGATCATCTCATTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
3UTR TCA 90 bp AAAGGAGCTGTTTCTATAATTGCATCTTGGAGCTGCAGAATAGCTTaGATATTTGAAGGTCAACTAAAGGGTCTTAGGAATGTTTCAGAA +
Preference number: 1 (lower is better)
Translates to: KGAVSIIASWSCRIA*IFEGQLKGLRNVSE
Trigger: TTCTGAAACATTCCTAAGACCCTTTAGTTGACCTTCAAATATTCAAGCTATTCTGCAGCTCCAAGATGCAATTATAGAAACAGCTCCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR GCA 90 bp AGCGGTCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGCTCCAGGCCCTCTGTTaGCTGGGGCCTCCACTGTGC +
Preference number: 2 (lower is better)
Translates to: SGLWDSASCLGWGGLAGWLQALC*LGPPLC
Trigger: GCACAGTGGAGGCCCCAGGCAACAGAGGGCCTGGAG...CCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGACCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR GCA 90 bp AGCGGTCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGCTGGGGCCTCCACTGTaGTGGTCAGTCCCTGTTCAA +
Preference number: 2 (lower is better)
Translates to: SGLWDSASCLGWGGLAGWLGPPL*WSVPVQ
Trigger: TTGAACAGGGACTGACCAGCACAGTGGAGGCCCCAG...CCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGACCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR GCA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGCTCCAGGCCCTCTGTTaGCTGGGGCCTCCACTGTGC +
Preference number: 2 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMLQALC*LGPPLC
Trigger: GCACAGTGGAGGCCCCAGGCAACAGAGGGCCTGGAG...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR GCA 90 bp CTCCATGCCAAACCCACTGACGTAGCCCAACAAGCCGCTGCGGTAGAGGGTCTCCCCAGGGGGATGCTGTaGTGCAGCTCCAGGAGGGCG +
Preference number: 2 (lower is better)
Translates to: LHAKPTDVAQQAAAVEGLPRGML*CSSRRA
Trigger: CGCCCTCCTGGAGCTGCAGCACAGCATCCCCCTGGG...GAGACCCTCTACCGCAGCGGCTTGTTGGGCTACGTCAGTGGGTTTGGCATGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
3UTR-3UTR TCA 90 bp CAGCTACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATCAGCCCAGGTGTCCCTaGGTCCCCAGCCTCAGCTGT +
Preference number: 2 (lower is better)
Translates to: QLRLSLNRVACQQGQGWDQPRCP*VPSLSC
Trigger: ACAGCTGAGGCTGGGGACTCAGGGACACCTGGGCTG...ATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
3UTR-3UTR CCA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGGGGCCTCCACTGTGCTaGTCAGTCCCTGTTCAAGCC +
Preference number: 2 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMGPPLC*SVPVQA
Trigger: GGCTTGAACAGGGACTGACCAGCACAGTGGAGGCCC...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR GCA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGCTGGGGCCTCCACTGTaGTGGTCAGTCCCTGTTCAA +
Preference number: 2 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMLGPPL*WSVPVQ
Trigger: TTGAACAGGGACTGACCAGCACAGTGGAGGCCCCAG...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR GCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCGGGATGGGGCGGGCTTaGCGGGTGGGGGTTTCTCTT +
Preference number: 2 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLGMGRA*RVGVSL
Trigger: AAGAGAAACCCCCACCCGGCAAGCCCGCCCCATCCC...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCGGCGGGCTTGCCGGGTaGGGGTTTCTCTTGCAGTGG +
Preference number: 2 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLGGLAG*GFLLQW
Trigger: CCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR GCA 90 bp AGCGGTCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGCTTGCAGTGGCTTGGTaGAACAGTGATGTGAATAGG +
Preference number: 2 (lower is better)
Translates to: SGLWDSASCLGWGGLAGWLAVAW*NSDVNR
Trigger: CCTATTCACATCACTGTTGCACCAAGCCACTGCAAG...CCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGACCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR TCA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCGGGGCCTAGTGCATaGGCACAGGGAGGTAGAGGG +
Preference number: 2 (lower is better)
Translates to: SCISLLSGWGYKCASLHLPGPSA*AQGGRG
Trigger: CCCTCTACCTCCCTGTGCTCATGCACTAGGCCCCGG...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR GCA 90 bp TGCACTGTGTGCAGAGGGAGCCCGCGTCATGCACAGCAGGGAGGGGAGGGTTTTCAGGCACACAGAAGGTaGAAGATCCACCAACGCTTG +
Preference number: 2 (lower is better)
Translates to: CTVCRGSPRHAQQGGEGFQAHRR*KIHQRL
Trigger: CAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTG...AAAACCCTCCCCTCCCTGCTGTGCATGACGCGGGCTCCCTCTGCACACAGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
3UTR CAA 90 bp TTGTCAGAAAACACCTCGGGTCTCTGTCTCTTTTGGAGCCAGGCGTaGCAGGCCTCCCTGGGAGCTACAGGCAGCCTCGAGTACTTCAGC +
Preference number: 2 (lower is better)
Translates to: LSENTSGLCLFWSQA*QASLGATGSLEYFS
Trigger: GCTGAAGTACTCGAGGCTGCCTGTAGCTCCCAGGGAGGCCTGCAACGCCTGGCTCCAAAAGAGACAGAGACCCGAGGTGTTTTCTGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
3UTR-3UTR TCA 90 bp AATGCCCGTGGCCACCCAGTGATGGGCATGATTGTCCCATACCACATAGACGCTCCATGCCAAACCCACTaGCGTAGCCCAACAAGCCGC +
Preference number: 2 (lower is better)
Translates to: NARGHPVMGMIVPYHIDAPCQTH*RSPTSR
Trigger: GCGGCTTGTTGGGCTACGTCAGTGGGTTTGGCATGG...AGCGTCTATGTGGTATGGGACAATCATGCCCATCACTGGGTGGCCACGGGCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
3UTR-3UTR TCA 90 bp ATGATCTGCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCAGCCCAGGTGTCCCTaGGTCCCCAGCCTCAGCTGT +
Preference number: 2 (lower is better)
Translates to: MICKHWACKSAWKQPLGAQPRCP*VPSLSC
Trigger: ACAGCTGAGGCTGGGGACTCAGGGACACCTGGGCTG...AGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGATCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
3UTR-3UTR GCA 90 bp ACAGTTTGGTGGTTCCAGGCATACACTGAAGAACCTCCTCCCCATCCTGTCTGTCCAGGTCCCTGGGGTTaGACAGGTGAGTGCCCCTGC +
Preference number: 2 (lower is better)
Translates to: TVWWFQAYTEEPPPHPVCPGPWG*TGECPC
Trigger: GCAGGGGCACTCACCTGTGCAACCCCAGGGACCTGG...ACAGACAGGATGGGGAGGAGGTTCTTCAGTGTATGCCTGGAACCACCAAACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537833.5
ENST00000673569.1
3UTR-3UTR GCA 90 bp TCCCGTGGGGACTGTGATCACAGTGGTTGTTTCAAAGTTGTTGGGGTAAGGCTTAGGGAGCCCGCGTCATaGACAGCAGGGAGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: SRGDCDHSGCFKVVGVRLREPAS*TAGRGG
Trigger: CCCTCCCCTCCCTGCTGTGCATGACGCGGGCTCCCT...AAGCCTTACCCCAACAACTTTGAAACAACCACTGTGATCACAGTCCCCACGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
3UTR-3UTR CCA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGACTCTGCTTCCTGTCTaGGATGGGGCGGGCTTGCCG +
Preference number: 2 (lower is better)
Translates to: SCISLLSGWGYKCASLHLTLLPV*DGAGLP
Trigger: CGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGT...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR TCA 90 bp GGAAAGTGTGAGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGAGCAGGGAGGTAGAGGGTaGGGAGGAGCGGTCTGTGGG +
Preference number: 2 (lower is better)
Translates to: GKCELEDTIFAEAGIPREQGGRG*GGAVCG
Trigger: CCCACAGACCGCTCCTCCTCACCCTCTACCTCCCTG...CTCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR TCA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGGGGAGGGAAAGCGGGTaGCACAGCAGGTTAGAGGAG +
Preference number: 2 (lower is better)
Translates to: SCISLLSGWGYKCASLHLGRESG*HSRLEE
Trigger: CTCCTCTAACCTGCTGTGTCACCCGCTTTCCCTCCC...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR GCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCGGTGGGGGTTTCTCTTaGAGTGGCTTGGTGCAACAG +
Preference number: 2 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLGGGFS*SGLVQQ
Trigger: CTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACC...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR GCA 90 bp CCGGTGAGATGTAACTTGGTGCTGCTGCAGGCATACACTGAAGAACCTCCTCCCAGGGTTGTCTCCAGGTaGGTTGATGGCCTCAGAGCC +
Preference number: 2 (lower is better)
Translates to: PVRCNLVLLQAYTEEPPPRVVSR*VDGLRA
Trigger: GGCTCTGAGGCCATCAACGCACCTGGAGACAACCCT...GGGAGGAGGTTCTTCAGTGTATGCCTGCAGCAGCACCAAGTTACATCTCACCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534969.1
ENST00000672500.1
3UTR-3UTR GCA 90 bp CTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTCGCCCAGGGGGATGCTGTaGTGCAGCTCCAGGAGGGCG +
Preference number: 2 (lower is better)
Translates to: LCLCVSSPTQNILSENTSPRGML*CSSRRA
Trigger: CGCCCTCCTGGAGCTGCAGCACAGCATCCCCCTGGG...CGAGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
3UTR-3UTR GCA 90 bp TCTGCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCAGCCTTAATAGGGTTGCTTaGCAGCAGGGGCAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: SANTGPVNLHGNNRWGLSLNRVA*QQGQGW
Trigger: CCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAG...GCTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
3UTR-3UTR CCA 90 bp AATGCCCGTGGCCACCCAGTGATGGGCATGATTGTCCCATACCACATAGACGCTTGCACAACGACACGGTaGACAGGGTGGTTCCCCAGT +
Preference number: 2 (lower is better)
Translates to: NARGHPVMGMIVPYHIDACTTTR*TGWFPS
Trigger: ACTGGGGAACCACCCTGTCCACCGTGTCGTTGTGCA...AGCGTCTATGTGGTATGGGACAATCATGCCCATCACTGGGTGGCCACGGGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
3UTR-3UTR GCA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGGTCCGCAGGCTGGAGTaGAGTGGCGTGATCTTAGCT +
Preference number: 2 (lower is better)
Translates to: SCISLLSGWGYKCASLHLVRRLE*SGVILA
Trigger: AGCTAAGATCACGCCACTGCACTCCAGCCTGCGGAC...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CCA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGAGGAGGAGCGGTCTGTaGGACTCTGCTTCCTGTCTG +
Preference number: 2 (lower is better)
Translates to: SCISLLSGWGYKCASLHLRRSGL*DSASCL
Trigger: CAGACAGGAAGCAGAGTCCCACAGACCGCTCCTCCT...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CCA 90 bp GGCAGACACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAAGACCGGGAGGACGTTaGGGCCCAGGGGGATGCTGT +
Preference number: 2 (lower is better)
Translates to: GRHCAFASHPQHRTYCQKRPGGR*GPGGCC
Trigger: ACAGCATCCCCCTGGGCCCCAACGTCCTCCCGGTCT...TTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
3UTR CAA 90 bp AACACAGAACATATTGTCAGAAAACACCTCGGGTCTCTGTCTCTTTaGGAGCCAGGCGTTGCAGGCCTCCCTGGGAGCTACAGGCAGCCT +
Preference number: 2 (lower is better)
Translates to: NTEHIVRKHLGSLSL*EPGVAGLPGSYRQP
Trigger: AGGCTGCCTGTAGCTCCCAGGGAGGCCTGCAACGCCTGGCTCCAAAAGAGACAGAGACCCGAGGTGTTTTCTGACAATATGTTCTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
3UTR-3UTR TCA 90 bp GGAAAGTGTGAGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGAGGGGAGGGAAAGCGGGTaGCACAGCAGGTTAGAGGAG +
Preference number: 2 (lower is better)
Translates to: GKCELEDTIFAEAGIPREGRESG*HSRLEE
Trigger: CTCCTCTAACCTGCTGTGTCACCCGCTTTCCCTCCC...CTCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR TCA 90 bp GAGCTTCACCCTGTATCCCGTGGGGACTGTGATCACAGTGGTTGTTTCAAAGTTTCTCAAGGCCCGTGTTaGATCCTGGGCTCTCCCGAC +
Preference number: 2 (lower is better)
Translates to: ELHPVSRGDCDHSGCFKVSQGPC*ILGSPD
Trigger: GTCGGGAGAGCCCAGGATTCAACACGGGCCTTGAGA...AACTTTGAAACAACCACTGTGATCACAGTCCCCACGGGATACAGGGTGAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
3UTR-3UTR GCA 90 bp TGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATTGCCGGTGAGATGTAACCCAGGTCCCTGGGGTTaGACAGGTGAGTGCCCCTGC +
Preference number: 2 (lower is better)
Translates to: WISKMVGLNPHVLPVRCNPGPWG*TGECPC
Trigger: GCAGGGGCACTCACCTGTGCAACCCCAGGGACCTGG...GTTACATCTCACCGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000534969.1
ENST00000537833.5
ENST00000672500.1
ENST00000673569.1
3UTR-3UTR GCA 90 bp GTGGAAGGTCAGCAGCATCTTGTTCCCTTGGGACATAAATTCCTTCTTTCCCGGCCGACAGCGTCTTCGTaGACTGTGTGCAGAGGGAGC +
Preference number: 2 (lower is better)
Translates to: VEGQQHLVPLGHKFLLSRPTASS*TVCRGS
Trigger: GCTCCCTCTGCACACAGTGCACGAAGACGCTGTCGG...CCGGGAAAGAAGGAATTTATGTCCCAAGGGAACAAGATGCTGCTGACCTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
3UTR-3UTR GCA 90 bp AATGCCCGTGGCCACCCAGTGATGGGCATGATTGTCCCATACCACATAGACGCTCAGACACTGTGCCTTTaGGTCTCATCCCCAACACAG +
Preference number: 2 (lower is better)
Translates to: NARGHPVMGMIVPYHIDAQTLCL*VSSPTQ
Trigger: CTGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTG...AGCGTCTATGTGGTATGGGACAATCATGCCCATCACTGGGTGGCCACGGGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
3UTR-3UTR GCA 90 bp ATGATCTGCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCTTAATAGGGTTGCTTaGCAGCAGGGGCAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: MICKHWACKSAWKQPLGALNRVA*QQGQGW
Trigger: CCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAG...AGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGATCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
3UTR-3UTR CCA 90 bp GGAAAGTGTGAGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGAGGGGCCTCCACTGTGCTaGTCAGTCCCTGTTCAAGCC +
Preference number: 2 (lower is better)
Translates to: GKCELEDTIFAEAGIPREGPPLC*SVPVQA
Trigger: GGCTTGAACAGGGACTGACCAGCACAGTGGAGGCCC...CTCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CCA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGGTCACACACCAGCTGTaGGACTTGGGCAAGTCCCTT +
Preference number: 2 (lower is better)
Translates to: SCISLLSGWGYKCASLHLVTHQL*DLGKSL
Trigger: AAGGGACTTGCCCAAGTCCCACAGCTGGTGTGTGAC...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCAGTATTGCAGCACACTaGGAAGAGCACAGTCTCTGC +
Preference number: 2 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLSIAAH*EEHSLC
Trigger: GCAGAGACTGTGCTCTTCCCAGTGTGCTGCAATACT...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CCA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGGGGGTTTCACCATGTTaGCCAGGATGGGCTGGATCT +
Preference number: 2 (lower is better)
Translates to: SCISLLSGWGYKCASLHLGVSPC*PGWAGS
Trigger: AGATCCAGCCCATCCTGGCCAACATGGTGAAACCCC...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR TCA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAAAGCTGTGTCAACAGATaGAGTAGGGGAAGGCGGTTC +
Preference number: 2 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWESCVNR*SRGRRF
Trigger: GAACCGCCTTCCCCTACTTCATCTGTTGACACAGCT...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR GCA 90 bp TGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATTGCCGGTGAGATGTAACGGTGAGTGCCCCTGCTaGCGCGGCCTGATAATAGGG +
Preference number: 2 (lower is better)
Translates to: WISKMVGLNPHVLPVRCNGECPC*RGLIIG
Trigger: CCCTATTATCAGGCCGCGGCAGCAGGGGCACTCACC...GTTACATCTCACCGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000534969.1
ENST00000537833.5
ENST00000672500.1
ENST00000673569.1
3UTR-3UTR CCA 90 bp GGAAAGTGTGAGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGAGAGGAGGAGCGGTCTGTaGGACTCTGCTTCCTGTCTG +
Preference number: 2 (lower is better)
Translates to: GKCELEDTIFAEAGIPRERRSGL*DSASCL
Trigger: CAGACAGGAAGCAGAGTCCCACAGACCGCTCCTCCT...CTCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CCA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGGTTGGTCCTCTCAGGTaGAGCAGTTCCCCTGATGAT +
Preference number: 2 (lower is better)
Translates to: SCISLLSGWGYKCASLHLVGPLR*SSSPDD
Trigger: ATCATCAGGGGAACTGCTCCACCTGAGAGGACCAAC...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CCA 90 bp GAAGGTCAGCAGCATCTTGTTCCCTTGGGACATAAATTCCTTCTTTCCCGGGGGAGATCCACCAACGCTTaGAGGGTTTCTCCAGCAGGC +
Preference number: 2 (lower is better)
Translates to: EGQQHLVPLGHKFLLSRGRSTNA*RVSPAG
Trigger: GCCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCT...CCCCCGGGAAAGAAGGAATTTATGTCCCAAGGGAACAAGATGCTGCTGACCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
3UTR-3UTR TCA 90 bp AAAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATTGCCGGTGAGGCTGCAGGCATACACTaGAGAACCTCCTCCCCATCC +
Preference number: 2 (lower is better)
Translates to: KSVDLKNGGLEPSCIAGEAAGIH*RTSSPS
Trigger: GGATGGGGAGGAGGTTCTTCAGTGTATGCCTGCAGC...CTCACCGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000534969.1
ENST00000672500.1
3UTR-3UTR TCA 90 bp CCTCCCCAGGCTTTTCTTATCAGCAGAGATCTTGACATAATCATAGAAGCAGCCTCTCAAGGCCCGTGTTaGATCCTGGGCTCTCCCGAC +
Preference number: 2 (lower is better)
Translates to: PPQAFLISRDLDIIIEAASQGPC*ILGSPD
Trigger: GTCGGGAGAGCCCAGGATTCAACACGGGCCTTGAGA...GGCTGCTTCTATGATTATGTCAAGATCTCTGCTGATAAGAAAAGCCTGGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
3UTR-3UTR GCA 90 bp AAAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATTGCCGGTGAGAGGGTTGTCTCCAGGTaGGTTGATGGCCTCAGAGCC +
Preference number: 2 (lower is better)
Translates to: KSVDLKNGGLEPSCIAGERVVSR*VDGLRA
Trigger: GGCTCTGAGGCCATCAACGCACCTGGAGACAACCCT...CTCACCGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000534969.1
ENST00000537833.5
ENST00000672500.1
ENST00000673569.1
3UTR-3UTR GCA 90 bp ATGCTTTCATTCAAAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTCCAGGTCCCTGGGGTTaGACAGGTGAGTGCCCCTGC +
Preference number: 2 (lower is better)
Translates to: MLSFKSVDLKNGGLEPSCPGPWG*TGECPC
Trigger: GCAGGGGCACTCACCTGTGCAACCCCAGGGACCTGG...ACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTTTGAATGAAAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000534969.1
ENST00000537833.5
ENST00000672500.1
ENST00000673569.1
3UTR-3UTR CCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCTCTCTTGCAGTGGCTTaGTGCAACAGTGATGTGAAT +
Preference number: 2 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLSLAVA*CNSDVN
Trigger: ATTCACATCACTGTTGCACCAAGCCACTGCAAGAGA...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CCA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAAGGGTTTCTCTTGCAGTaGCTTGGTGCAACAGTGATG +
Preference number: 2 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWEGFLLQ*LGATVM
Trigger: CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCC...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR CAA 90 bp AAAATGGTGGGCTTGAACCCTCATGTATTGCCGGTGAGATGTAACTaGGTGCTGCTGCAGGCATACACTGAAGAACCTCCTCCCCATCCT +
Preference number: 2 (lower is better)
Translates to: KMVGLNPHVLPVRCN*VLLQAYTEEPPPHP
Trigger: AGGATGGGGAGGAGGTTCTTCAGTGTATGCCTGCAGCAGCACCAAGTTACATCTCACCGGCAATACATGAGGGTTCAAGCCCACCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534969.1
ENST00000672500.1
3UTR-3UTR TCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCGCCATTAGGAAAGTGTaGGCTAGAGGATACCATTTT +
Preference number: 2 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLAIRKV*ARGYHF
Trigger: AAAATGGTATCCTCTAGCTCACACTTTCCTAATGGC...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR GCA 90 bp GGAAAGTGTGAGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGAGGAAGAGCACAGTCTCTaGAGTCACACACCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: GKCELEDTIFAEAGIPREEEHSL*SHTPAV
Trigger: CACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTC...CTCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CCA 90 bp GGAAAGTGTGAGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGAGAAAATGGTAAGGATGTaGGGGCTGGGAGGGAAAGCG +
Preference number: 2 (lower is better)
Translates to: GKCELEDTIFAEAGIPREKMVRM*GLGGKA
Trigger: CGCTTTCCCTCCCAGCCCCCACATCCTTACCATTTT...CTCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CCA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTACTTCAGTCCAGTGCTaGGCTCACCTGGCTTCTGCA +
Preference number: 2 (lower is better)
Translates to: LSGWGYKCASLHLPFGNITSVQC*AHLASA
Trigger: TGCAGAAGCCAGGTGAGCCCAGCACTGGACTGAAGT...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CCA 90 bp GGCAGACACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACGGTGGACAGGGTaGTTCCCCAGTTTCAGCATC +
Preference number: 2 (lower is better)
Translates to: GRHCAFASHPQHRTYCQKTRWTG*FPSFSI
Trigger: GATGCTGAAACTGGGGAACCACCCTGTCCACCGTGT...TTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
3UTR-3UTR TCA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTCAAGGCGAAAGTTGTTaGGATGTACAGGCTTCCCGG +
Preference number: 2 (lower is better)
Translates to: LSGWGYKCASLHLPFGNIQGESC*DVQASR
Trigger: CCGGGAAGCCTGTACATCTCAACAACTTTCGCCTTG...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR GCA 90 bp CTTTCATTCAAAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATTGGTGAGTGCCCCTGCTaGCGCGGCCTGATAATAGGG +
Preference number: 2 (lower is better)
Translates to: LSFKSVDLKNGGLEPSCIGECPC*RGLIIG
Trigger: CCCTATTATCAGGCCGCGGCAGCAGGGGCACTCACC...AATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTTTGAATGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000534969.1
ENST00000537833.5
ENST00000672500.1
ENST00000673569.1
3UTR-3UTR CCA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTGTTGGTCCTCTCAGGTaGAGCAGTTCCCCTGATGAT +
Preference number: 2 (lower is better)
Translates to: LSGWGYKCASLHLPFGNIVGPLR*SSSPDD
Trigger: ATCATCAGGGGAACTGCTCCACCTGAGAGGACCAAC...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CCA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTGGACTCCTAAGGTGTTaGGATTACAGGCGTGAGCCA +
Preference number: 2 (lower is better)
Translates to: LSGWGYKCASLHLPFGNIGLLRC*DYRREP
Trigger: TGGCTCACGCCTGTAATCCCAACACCTTAGGAGTCC...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CCA 90 bp TGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATTGCCGGTGAGATGTAACAGTGGTTCTGGACCTTaGCAGGGTTGTCTCCAGGTG +
Preference number: 2 (lower is better)
Translates to: WISKMVGLNPHVLPVRCNSGSGP*QGCLQV
Trigger: CACCTGGAGACAACCCTGCCAAGGTCCAGAACCACT...GTTACATCTCACCGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000534969.1
ENST00000537833.5
ENST00000672500.1
ENST00000673569.1
3UTR CAA 90 bp AACCCTCATGTATTGCCGGTGAGATGTAACTTGGTGCTGCTGCTGTaGAAGACAGTTTGGTGGTTCCAGGCATACACTGAAGAACCTCCT +
Preference number: 2 (lower is better)
Translates to: NPHVLPVRCNLVLLL*KTVWWFQAYTEEPP
Trigger: AGGAGGTTCTTCAGTGTATGCCTGGAACCACCAAACTGTCTTCAACAGCAGCAGCACCAAGTTACATCTCACCGGCAATACATGAGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537833.5
ENST00000673569.1
3UTR CAA 90 bp AAAATGGTGGGCTTGAACCCTCATGTATTGCCGGTGAGATGTAACTaGGTGCTGCTGCTGTTGAAGACAGTTTGGTGGTTCCAGGCATAC +
Preference number: 2 (lower is better)
Translates to: KMVGLNPHVLPVRCN*VLLLLKTVWWFQAY
Trigger: GTATGCCTGGAACCACCAAACTGTCTTCAACAGCAGCAGCACCAAGTTACATCTCACCGGCAATACATGAGGGTTCAAGCCCACCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537833.5
ENST00000673569.1
3UTR-3UTR TCA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGAGAAATGCAATGCAATaGAAACCCCTTCCTCCATAC +
Preference number: 2 (lower is better)
Translates to: SCISLLSGWGYKCASLHLRNAMQ*KPLPPY
Trigger: GTATGGAGGAAGGGGTTTTCATTGCATTGCATTTCT...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR TCA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGGCCATTAGGAAAGTGTaGGCTAGAGGATACCATTTT +
Preference number: 2 (lower is better)
Translates to: SCISLLSGWGYKCASLHLAIRKV*ARGYHF
Trigger: AAAATGGTATCCTCTAGCTCACACTTTCCTAATGGC...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR GCA 90 bp ACACAGAACATATTGTCAGAAAACACCTCGGGTCTCTGTCTCTTTTGGAGCCAGAGCCCAACAAGCCGCTaGGGTAGAGGGTCTCATTAT +
Preference number: 2 (lower is better)
Translates to: TQNILSENTSGLCLFWSQSPTSR*GRGSHY
Trigger: ATAATGAGACCCTCTACCGCAGCGGCTTGTTGGGCT...CTGGCTCCAAAAGAGACAGAGACCCGAGGTGTTTTCTGACAATATGTTCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
3UTR CAA 90 bp TCAAAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATaGCCGGTGAGATGTAACTTGGTGCTGCTGCAGGCATACACTGAA +
Preference number: 2 (lower is better)
Translates to: SKAWISKMVGLNPHV*PVRCNLVLLQAYTE
Trigger: TTCAGTGTATGCCTGCAGCAGCACCAAGTTACATCTCACCGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534969.1
ENST00000672500.1
3UTR-3UTR TCA 90 bp TTTCATTCAAAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATTGGCTGCAGGCATACACTaGAGAACCTCCTCCCCATCC +
Preference number: 2 (lower is better)
Translates to: FHSKAWISKMVGLNPHVLAAGIH*RTSSPS
Trigger: GGATGGGGAGGAGGTTCTTCAGTGTATGCCTGCAGC...CAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTTTGAATGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000534969.1
ENST00000672500.1
3UTR-3UTR TCA 90 bp TGTCTTCCTGAAGCTCATAGCCTGGACGGCAGGAACAGAAGTAGCCTCCAACGTTATCAGCAGAGATCTTaGCATAATCATAGAAGCAGC +
Preference number: 2 (lower is better)
Translates to: CLPEAHSLDGRNRSSLQRYQQRS*HNHRSS
Trigger: GCTGCTTCTATGATTATGTCAAGATCTCTGCTGATA...ACGTTGGAGGCTACTTCTGTTCCTGCCGTCCAGGCTATGAGCTTCAGGAAGACA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
3UTR-3UTR CCA 90 bp ATGCTTTCATTCAAAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTTCCTGGCAGTGGTTCTaGACCTTGGCAGGGTTGTCT +
Preference number: 2 (lower is better)
Translates to: MLSFKSVDLKNGGLEPSCSWQWF*TLAGLS
Trigger: AGACAACCCTGCCAAGGTCCAGAACCACTGCCAGGA...ACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTTTGAATGAAAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000534969.1
ENST00000537833.5
ENST00000672500.1
ENST00000673569.1
3UTR CAA 90 bp TCAAAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATaGCCGGTGAGATGTAACTTGGTGCTGCTGCTGTTGAAGACAGTT +
Preference number: 2 (lower is better)
Translates to: SKAWISKMVGLNPHV*PVRCNLVLLLLKTV
Trigger: AACTGTCTTCAACAGCAGCAGCACCAAGTTACATCTCACCGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537833.5
ENST00000673569.1
3UTR CAA 90 bp AGGCAATGCTTTCATTCAAAAGCGTGGATCTCAAAAATGGTGGGCTaGAACCCTCATGTATTGCCGGTGAGATGTAACTTGGTGCTGCTG +
Preference number: 2 (lower is better)
Translates to: RQCFHSKAWISKMVG*NPHVLPVRCNLVLL
Trigger: CAGCAGCACCAAGTTACATCTCACCGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTTTGAATGAAAGCATTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000534969.1
ENST00000537833.5
ENST00000672500.1
ENST00000673569.1
3UTR-3UTR CCA 90 bp GAGGGTTTTCTGTTTAATGTGCAAGACACTTTCCCAGGCAATAGATTGCAAGAAAGATCCACCAACGCTTaGAGGGTTTCTCCAGCAGGC +
Preference number: 2 (lower is better)
Translates to: EGFLFNVQDTFPGNRLQERSTNA*RVSPAG
Trigger: GCCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCT...TTCTTGCAATCTATTGCCTGGGAAAGTGTCTTGCACATTAAACAGAAAACCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
3UTR-3UTR CCA 90 bp CAACACAGAACATATTGTCAGAAAACACCTCGGGTCTCTGTCTCTTTTGGAGCCTCAGCATCTCATCTATaGCTGTGTGGCCCAAGAACA +
Preference number: 2 (lower is better)
Translates to: QHRTYCQKTPRVSVSFGASASHL*LCGPRT
Trigger: TGTTCTTGGGCCACACAGCCATAGATGAGATGCTGA...GGCTCCAAAAGAGACAGAGACCCGAGGTGTTTTCTGACAATATGTTCTGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
3UTR-3UTR GCA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTAGCTGTTTCTATAATTaGATCTTGGAGCTGCAGAAT +
Preference number: 2 (lower is better)
Translates to: LSGWGYKCASLHLPFGNISCFYN*ILELQN
Trigger: ATTCTGCAGCTCCAAGATGCAATTATAGAAACAGCT...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR GCA 72 bp GAGGTAGAGGGTGAGGAGGAGCGGTCTGTGGGACTCTaGTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTG +
Preference number: 3 (lower is better)
Translates to: EVEGEEERSVGL*FLSGMGRACRV
Trigger: CACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGACCGCTCCTCCTCACCCTCTACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR GCA 72 bp TCCTGGGCTCTCCCGACAGCGTCTTCGTGCACTGTGTaGAGAGGGAGCCCGCGTCATGCACAGCAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: SWALPTASSCTV*RGSPRHAQQGG
Trigger: CCCTCCCTGCTGTGCATGACGCGGGCTCCCTCTGCACACAGTGCACGAAGACGCTGTCGGGAGAGCCCAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
3UTR GCA 72 bp GTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTaGCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGC +
Preference number: 3 (lower is better)
Translates to: VGLCFLSGMGRA*RVGVSLAVAWC
Trigger: GCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CAA 90 bp TGCCCCTGCTGCCGCGGCCTGATAATAGGGCTCCTGGCAGTGGTTCTGGACCTTTTGTCTCCAGGTGCGTaGATGGCCTCAGAGCCCCTG +
Preference number: 3 (lower is better)
Translates to: CPCCRGLIIGLLAVVLDLLSPGA*MASEPL
Trigger: CAGGGGCTCTGAGGCCATCAACGCACCTGGAGACAA...AAGGTCCAGAACCACTGCCAGGAGCCCTATTATCAGGCCGCGGCAGCAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000534969.1
ENST00000537833.5
ENST00000672500.1
ENST00000673569.1
3UTR GCA 72 bp GGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTaGTGGGCTCACCTGGCTTCTGCAGGAGATGGGGCC +
Preference number: 3 (lower is better)
Translates to: GTGGVSARTSVQ*WAHLASAGDGA
Trigger: GGCCCCATCTCCTGCAGAAGCCAGGTGAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR GCA 72 bp CGTGTTGAATCCTGGGCTCTCCCGACAGCGTCTTCGTaGACTGTGTGCAGAGGGAGCCCGCGTCATGCACAG +
Preference number: 3 (lower is better)
Translates to: RVESWALPTASS*TVCRGSPRHAQ
Trigger: CTGTGCATGACGCGGGCTCCCTCTGCACACAGTGCACGAAGACGCTGTCGGGAGAGCCCAGGATTCAACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
3UTR CCA 72 bp TCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTaGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTG +
Preference number: 3 (lower is better)
Translates to: SASCLGWGGLAG*GFLLQWLGATV
Trigger: CACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CAA 90 bp CACCCAGTGATGGGCATGATTGTCCCATACCACATAGACGCTGCCACTGTCCCCTTTTGGAGCCAGGCGTaGCAGGCCTCCCTGGGAGCT +
Preference number: 3 (lower is better)
Translates to: HPVMGMIVPYHIDAATVPFWSQA*QASLGA
Trigger: AGCTCCCAGGGAGGCCTGCAACGCCTGGCTCCAAAA...GGGGACAGTGGCAGCGTCTATGTGGTATGGGACAATCATGCCCATCACTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
3UTR-3UTR CAA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCGGGTGGGGGTTTCTCTaGCAGTGGCTTGGTGCAACA +
Preference number: 3 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLGWGFL*QWLGAT
Trigger: TGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCC...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR CCA 72 bp AGCAGGAATTCCCAGGGAGGGAAAATGGTAAGGATGTaGGGGCTGGGAGGGAAAGCGGGTGACACAGCAGGT +
Preference number: 3 (lower is better)
Translates to: SRNSQGGKMVRM*GLGGKAGDTAG
Trigger: ACCTGCTGTGTCACCCGCTTTCCCTCCCAGCCCCCACATCCTTACCATTTTCCCTCCCTGGGAATTCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR CCA 72 bp ACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTaGGCTCACCTGGCTTCTGCAGGAGATGGGGCCATT +
Preference number: 3 (lower is better)
Translates to: TGGVSARTSVQC*AHLASAGDGAI
Trigger: AATGGCCCCATCTCCTGCAGAAGCCAGGTGAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CAA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTTGGGATGGGGCGGGCTaGCCGGGTGGGGGTTTCTCT +
Preference number: 3 (lower is better)
Translates to: LSGWGYKCASLHLPFGNIWDGAG*PGGGFS
Trigger: AGAGAAACCCCCACCCGGCAAGCCCGCCCCATCCCA...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CAA 90 bp CACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTCAGACCGGGAGGACGTaGGGGCCCAGGGGGATGCTG +
Preference number: 3 (lower is better)
Translates to: HCAFASHPQHRTYCQKTPQTGRT*GPRGML
Trigger: CAGCATCCCCCTGGGCCCCAACGTCCTCCCGGTCTG...AGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
3UTR-3UTR CAA 90 bp CACCCAGTGATGGGCATGATTGTCCCATACCACATAGACGCTGCCACTGTCCCCGCAGACACTGTGCCTTaGCGTCTCATCCCCAACACA +
Preference number: 3 (lower is better)
Translates to: HPVMGMIVPYHIDAATVPADTVP*RLIPNT
Trigger: TGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTGC...GGGGACAGTGGCAGCGTCTATGTGGTATGGGACAATCATGCCCATCACTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
3UTR TCA 72 bp AGGAGGTACAAGAGCCACATTTCTCAAGGCCCGTGTTaGATCCTGGGCTCTCCCGACAGCGTCTTCGTGCAC +
Preference number: 3 (lower is better)
Translates to: RRYKSHISQGPC*ILGSPDSVFVH
Trigger: GTGCACGAAGACGCTGTCGGGAGAGCCCAGGATTCAACACGGGCCTTGAGAAATGTGGCTCTTGTACCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
3UTR GCA 72 bp GCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTaGAACAGTGATGTGAATAGGATTTCCCTGCCTCCC +
Preference number: 3 (lower is better)
Translates to: ACRVGVSLAVAW*NSDVNRISLPP
Trigger: GGGAGGCAGGGAAATCCTATTCACATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR GCA 72 bp AGTGATGGGCATGATTGTCCCATACCACATAGACGCTaGCACTGTCCCCCTGGCAGACACTGTGCCTTTGCG +
Preference number: 3 (lower is better)
Translates to: SDGHDCPIPHRR*HCPPGRHCAFA
Trigger: CGCAAAGGCACAGTGTCTGCCAGGGGGACAGTGGCAGCGTCTATGTGGTATGGGACAATCATGCCCATCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
3UTR CCA 72 bp ACAAGAGCCACATTTCTCAAGGCCCGTGTTGAATCCTaGGCTCTCCCGACAGCGTCTTCGTGCACTGTGTGC +
Preference number: 3 (lower is better)
Translates to: TRATFLKARVES*ALPTASSCTVC
Trigger: GCACACAGTGCACGAAGACGCTGTCGGGAGAGCCCAGGATTCAACACGGGCCTTGAGAAATGTGGCTCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
3UTR-3UTR CAA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGGGGTGGGGGTTTCTCTaGCAGTGGCTTGGTGCAACA +
Preference number: 3 (lower is better)
Translates to: SCISLLSGWGYKCASLHLGWGFL*QWLGAT
Trigger: TGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCC...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CAA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGTGGGGTTTCACCATGTaGGCCAGGATGGGCTGGATC +
Preference number: 3 (lower is better)
Translates to: SCISLLSGWGYKCASLHLWGFTM*ARMGWI
Trigger: GATCCAGCCCATCCTGGCCAACATGGTGAAACCCCA...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CAA 90 bp TGTCTTCCTGAAGCTCATAGCCTGGACGGCAGGAACAGAAGTAGCCTCCAACGTTTCTCAAGGCCCGTGTaGAATCCTGGGCTCTCCCGA +
Preference number: 3 (lower is better)
Translates to: CLPEAHSLDGRNRSSLQRFSRPV*NPGLSR
Trigger: TCGGGAGAGCCCAGGATTCAACACGGGCCTTGAGAA...ACGTTGGAGGCTACTTCTGTTCCTGCCGTCCAGGCTATGAGCTTCAGGAAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
3UTR-3UTR CAA 90 bp TGTCTTCCTGAAGCTCATAGCCTGGACGGCAGGAACAGAAGTAGCCTCCAACGTAAGATCCACCAACGCTaGGAGGGTTTCTCCAGCAGG +
Preference number: 3 (lower is better)
Translates to: CLPEAHSLDGRNRSSLQRKIHQR*EGFSSR
Trigger: CCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTT...ACGTTGGAGGCTACTTCTGTTCCTGCCGTCCAGGCTATGAGCTTCAGGAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
3UTR GCA 72 bp AGAAGTATTGCAGCACACTGGGAAGAGCACAGTCTCTaGAGTCACACACCAGCTGTGGGACTTGGGCAAGTC +
Preference number: 3 (lower is better)
Translates to: RSIAAHWEEHSL*SHTPAVGLGQV
Trigger: GACTTGCCCAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTGCAATACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR CCA 72 bp TGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCACCTaGCTTCTGCAGGAGATGGGGCCATTAGGAAAGTGT +
Preference number: 3 (lower is better)
Translates to: CLQELQSSAGLT*LLQEMGPLGKC
Trigger: ACACTTTCCTAATGGCCCCATCTCCTGCAGAAGCCAGGTGAGCCCAGCACTGGACTGAAGTTCTTGCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR CCA 72 bp GAGATGATCTGCAAACACTGGGCCTGTAAATCTGCATaGAAACAACCGCTGGGGGCTCAGCTACGGCTGTCT +
Preference number: 3 (lower is better)
Translates to: EMICKHWACKSA*KQPLGAQLRLS
Trigger: AGACAGCCGTAGCTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGATCATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
3UTR-3UTR CAA 90 bp AAAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATTGCCGGTGAGTTGTCTCCAGGTGCGTaGATGGCCTCAGAGCCCCTG +
Preference number: 3 (lower is better)
Translates to: KSVDLKNGGLEPSCIAGELSPGA*MASEPL
Trigger: CAGGGGCTCTGAGGCCATCAACGCACCTGGAGACAA...CTCACCGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000534969.1
ENST00000537833.5
ENST00000672500.1
ENST00000673569.1
3UTR-3UTR CAA 90 bp GTGTGGAAGGTCAGCAGCATCTTGTTCCCTTGGGACATAAATTCCTTCTTTCCCCAGTGGAGAACCCAGTaGCCCACAGAACCTCCCCAG +
Preference number: 3 (lower is better)
Translates to: VWKVSSILFPWDINSFFPQWRTQ*PTEPPQ
Trigger: CTGGGGAGGTTCTGTGGGCAACTGGGTTCTCCACTG...GGGAAAGAAGGAATTTATGTCCCAAGGGAACAAGATGCTGCTGACCTTCCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
3UTR-3UTR CAA 90 bp GGCAGACACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAGGGTCTCTGTCTCTTTaGGAGCCAGGCGTTGCAGGC +
Preference number: 3 (lower is better)
Translates to: GRHCAFASHPQHRTYCQKGSLSL*EPGVAG
Trigger: GCCTGCAACGCCTGGCTCCAAAAGAGACAGAGACCC...TTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
3UTR TCA 72 bp GAAGGCGGTTCTAAGGACATTCAAGGCGAAAGTTGTTaGGATGTACAGGCTTCCCGGGGCCTAGTGCATGAG +
Preference number: 3 (lower is better)
Translates to: EGGSKDIQGESC*DVQASRGLVHE
Trigger: CTCATGCACTAGGCCCCGGGAAGCCTGTACATCTCAACAACTTTCGCCTTGAATGTCCTTAGAACCGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR CCA 72 bp CAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTaGGAAGAGCACAGTCTCTGCAGTCACACACCAGCT +
Preference number: 3 (lower is better)
Translates to: QVRGGLRSIAAH*EEHSLCSHTPA
Trigger: AGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR CCA 72 bp CTCAAGCGATCCTCTTGCATCAGCCTCCTGAGTGGCTaGGGGTATAAGTGTGCATCATTGCACCTGCCTTTT +
Preference number: 3 (lower is better)
Translates to: LKRSSCISLLSG*GYKCASLHLPF
Trigger: AAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGAGGATCGCTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CAA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGTCAAGGCGAAAGTTGTaGAGATGTACAGGCTTCCCG +
Preference number: 3 (lower is better)
Translates to: SCISLLSGWGYKCASLHLSRRKL*RCTGFP
Trigger: CGGGAAGCCTGTACATCTCAACAACTTTCGCCTTGA...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CAA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTTGGGGTTTCACCATGTaGGCCAGGATGGGCTGGATC +
Preference number: 3 (lower is better)
Translates to: LSGWGYKCASLHLPFGNIWGFTM*ARMGWI
Trigger: GATCCAGCCCATCCTGGCCAACATGGTGAAACCCCA...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CAA 90 bp AAAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATTGCCGGTGAGTGGACCTTGGCAGGGTaGTCTCCAGGTGCGTTGATG +
Preference number: 3 (lower is better)
Translates to: KSVDLKNGGLEPSCIAGEWTLAG*SPGALM
Trigger: CATCAACGCACCTGGAGACAACCCTGCCAAGGTCCA...CTCACCGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000534969.1
ENST00000537833.5
ENST00000672500.1
ENST00000673569.1
3UTR TCA 72 bp GCTGTTGAAGACAGTTTGGTGGTTCCAGGCATACACTaGAGAACCTCCTCCCCATCCTGTCTGTCTTTCCAG +
Preference number: 3 (lower is better)
Translates to: AVEDSLVVPGIH*RTSSPSCLSFQ
Trigger: CTGGAAAGACAGACAGGATGGGGAGGAGGTTCTTCAGTGTATGCCTGGAACCACCAAACTGTCTTCAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537833.5
ENST00000673569.1
3UTR TCA 72 bp GGAAGACGAGCTTCACCCTGTATCCCGTGGGGACTGTaGTCACAGTGGTTGTTTCAAAGTTGTTGGGGTAAG +
Preference number: 3 (lower is better)
Translates to: GRRASPCIPWGL*SQWLFQSCWGK
Trigger: CTTACCCCAACAACTTTGAAACAACCACTGTGATCACAGTCCCCACGGGATACAGGGTGAAGCTCGTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
3UTR TCA 72 bp CTGGCTTCTGCAGGAGATGGGGCCATTAGGAAAGTGTaGGCTAGAGGATACCATTTTCGCAGAAGCAGGAAT +
Preference number: 3 (lower is better)
Translates to: LASAGDGAIRKV*ARGYHFRRSRN
Trigger: ATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCCTAATGGCCCCATCTCCTGCAGAAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR CCA 72 bp TGTAACTTGGTGCTGCTGCTGTTGAAGACAGTTTGGTaGTTCCAGGCATACACTGAAGAACCTCCTCCCCAT +
Preference number: 3 (lower is better)
Translates to: CNLVLLLLKTVW*FQAYTEEPPPH
Trigger: ATGGGGAGGAGGTTCTTCAGTGTATGCCTGGAACCACCAAACTGTCTTCAACAGCAGCAGCACCAAGTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537833.5
ENST00000673569.1
3UTR CCA 72 bp ATGATGGTCCCATTCTCCTCGTTGGAGAAGTCTGTGTaGAAGGTCAGCAGCATCTTGTTCCCTTGGGACATA +
Preference number: 3 (lower is better)
Translates to: MMVPFSSLEKSV*KVSSILFPWDI
Trigger: TATGTCCCAAGGGAACAAGATGCTGCTGACCTTCCACACAGACTTCTCCAACGAGGAGAATGGGACCATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
3UTR-3UTR CAA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGCCTCAGTTTCCTCATTaGTCACACATAGATAATAAC +
Preference number: 3 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLPQFPH*SHIDNN
Trigger: GTTATTATCTATGTGTGACAAATGAGGAAACTGAGG...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CAA 90 bp GGAAAGTGTGAGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGAGCATTCAAGGCGAAAGTaGTTGAGATGTACAGGCTTC +
Preference number: 3 (lower is better)
Translates to: GKCELEDTIFAEAGIPREHSRRK*LRCTGF
Trigger: GAAGCCTGTACATCTCAACAACTTTCGCCTTGAATG...CTCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CAA 90 bp ATGCTTTCATTCAAAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTCCGGTGAGATGTAACTaGGTGCTGCTGCTGTTGAAG +
Preference number: 3 (lower is better)
Translates to: MLSFKSVDLKNGGLEPSCPVRCN*VLLLLK
Trigger: CTTCAACAGCAGCAGCACCAAGTTACATCTCACCGG...ACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTTTGAATGAAAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537833.5
ENST00000673569.1
3UTR-3UTR CAA 90 bp AGAAGGCAATGCTTTCATTCAAAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCGGTGAGATGTAACTaGGTGCTGCTGCTGTTGAAG +
Preference number: 3 (lower is better)
Translates to: RRQCFHSKAWISKMVGLNPVRCN*VLLLLK
Trigger: CTTCAACAGCAGCAGCACCAAGTTACATCTCACCGG...GTTCAAGCCCACCATTTTTGAGATCCACGCTTTTGAATGAAAGCATTGCCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537833.5
ENST00000673569.1
3UTR-3UTR CAA 90 bp GGAAAGTGTGAGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGAGTTCTATAATTGCATCTaGGAGCTGCAGAATAGCTTG +
Preference number: 3 (lower is better)
Translates to: GKCELEDTIFAEAGIPREFYNCI*ELQNSL
Trigger: CAAGCTATTCTGCAGCTCCAAGATGCAATTATAGAA...CTCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CAA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTCTAAAAATTAAAGAGTaGGTCCTCTCAGGTGGAGCA +
Preference number: 3 (lower is better)
Translates to: LSGWGYKCASLHLPFGNILKIKE*VLSGGA
Trigger: TGCTCCACCTGAGAGGACCAACTCTTTAATTTTTAG...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CAA 90 bp CCTCCCCAGGCTTTTCTTATCAGCAGAGATCTTGACATAATCATAGAAGCAGCCTTCCCAGGCAATAGATaGCAAGAATTCACAGAGCTG +
Preference number: 3 (lower is better)
Translates to: PPQAFLISRDLDIIIEAAFPGNR*QEFTEL
Trigger: CAGCTCTGTGAATTCTTGCAATCTATTGCCTGGGAA...GGCTGCTTCTATGATTATGTCAAGATCTCTGCTGATAAGAAAAGCCTGGGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
3UTR CCA 72 bp TGGCATCTCTTTAAAAATGAGATGATCTGCAAACACTaGGCCTGTAAATCTGCATGGAAACAACCGCTGGGG +
Preference number: 3 (lower is better)
Translates to: WHLFKNEMICKH*ACKSAWKQPLG
Trigger: CCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGATCATCTCATTTTTAAAGAGATGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
3UTR-3UTR CAA 90 bp GGAAAGTGTGAGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGAGCCTCAGTTTCCTCATTaGTCACACATAGATAATAAC +
Preference number: 3 (lower is better)
Translates to: GKCELEDTIFAEAGIPREPQFPH*SHIDNN
Trigger: GTTATTATCTATGTGTGACAAATGAGGAAACTGAGG...CTCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR-3UTR CAA 90 bp TTTCATTCAAAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATTGGCTGTTGAAGACAGTTaGGTGGTTCCAGGCATACAC +
Preference number: 3 (lower is better)
Translates to: FHSKAWISKMVGLNPHVLAVEDS*VVPGIH
Trigger: GTGTATGCCTGGAACCACCAAACTGTCTTCAACAGC...CAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTTTGAATGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537833.5
ENST00000673569.1
CDS-3UTR GCA 90 bp AGCGGTCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGCCCAGGGGGATGCTGTaGTGCAGCTCCAGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: SGLWDSASCLGWGGLAGWPRGML*CSSRRA
Trigger: CGCCCTCCTGGAGCTGCAGCACAGCATCCCCCTGGG...CCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGACCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp AGCGGTCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGAGACCGGGAGGACGTTaGGGCCCAGGGGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: SGLWDSASCLGWGGLAGWRPGGR*GPGGCC
Trigger: ACAGCATCCCCCTGGGCCCCAACGTCCTCCCGGTCT...CCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGACCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTCCGGGGGATGTCAGCTaGTGGGGTAGCTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVPGDVS*WGSSWA
Trigger: GGCCCAAGAGCTACCCCAGCAGCTGACATCCCCCGG...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp AGCGGTCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGCAATGGGGGTGACTaGCCGTCCGCAGACAGGCAT +
Preference number: 4 (lower is better)
Translates to: SGLWDSASCLGWGGLAGWGNGGD*PSADRH
Trigger: ATGCCTGTCTGCGGACGGCCAGTCACCCCCATTGCC...CCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGACCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTAGACCGGGAGGACGTTaGGGCCCAGGGGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVRPGGR*GPGGCC
Trigger: ACAGCATCCCCCTGGGCCCCAACGTCCTCCCGGTCT...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTCGTTGCAGGCCTCCCTaGGAGCTACAGGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVRCRPP*ELQAAS
Trigger: CGAGGCTGCCTGTAGCTCCCAGGGAGGCCTGCAACG...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp CGCTGCGGTAGAGGGTCTCATTATCGGGCAGACAGACCGGGAGGACGTTGGGGCCCGGGGGATGTCAGCTaGTGGGGTAGCTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: RCGRGSHYRADRPGGRWGPGDVS*WGSSWA
Trigger: GGCCCAAGAGCTACCCCAGCAGCTGACATCCCCCGG...GCCCCAACGTCCTCCCGGTCTGTCTGCCCGATAATGAGACCCTCTACCGCAGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTGGCAATGGGGGTGACTaGCCGTCCGCAGACAGGCAT +
Preference number: 4 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVGNGGD*PSADRH
Trigger: ATGCCTGTCTGCGGACGGCCAGTCACCCCCATTGCC...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp AGCGGTCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGCCTCCACTGTGCTaGTCAGTCCCTGTTCAAGCC +
Preference number: 4 (lower is better)
Translates to: SGLWDSASCLGWGGLAGWGPPLC*SVPVQA
Trigger: GGCTTGAACAGGGACTGACCAGCACAGTGGAGGCCC...CCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGACCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGCAGGGAGGTAGAGGGTaGGGAGGAGCGGTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMQGGRG*GGAVCG
Trigger: CCCACAGACCGCTCCTCCTCACCCTCTACCTCCCTG...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGCCGGGGCCTAGTGCATaGGCACAGGGAGGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMPGPSA*AQGGRG
Trigger: CCCTCTACCTCCCTGTGCTCATGCACTAGGCCCCGG...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGTGGGGCCCAGGGGGATaGTGTGCTGCAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMWGPGG*CAAAPG
Trigger: TCCTGGAGCTGCAGCACAGCATCCCCCTGGGCCCCA...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp GCAGAACAGGGCCGGCACCAGGAGGTACAAGAGCCACATTTCTCAAGGCCCGTGAGGGAGCCCGCGTCATaGACAGCAGGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: AEQGRHQEVQEPHFSRPVREPAS*TAGRGG
Trigger: CCCTCCCCTCCCTGCTGTGCATGACGCGGGCTCCCT...CACGGGCCTTGAGAAATGTGGCTCTTGTACCTCCTGGTGCCGGCCCTGTTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR GCA 90 bp GATGGGAATGGAGCCTCCTGCCCTGCAGAACAGGGCCGGCACCAGGAGGTACAAGGGAATGGAGCCTCCTaGCCTGCAGAACAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: DGNGASCPAEQGRHQEVQGNGAS*PAEQGR
Trigger: CCGGCCCTGTTCTGCAGGGCAGGAGGCTCCATTCCC...TTGTACCTCCTGGTGCCGGCCCTGTTCTGCAGGGCAGGAGGCTCCATTCCCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR CCA 90 bp AGCGGTCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGCGCCTGGACAGCCTTTaGAGTGAGGGCTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SGLWDSASCLGWGGLAGWRLDSL*SEGFSR
Trigger: TCTGGAGAAGCCCTCACTCCAAAGGCTGTCCAGGCG...CCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGACCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTGGGGATGTCAGCTGCTaGGGTAGCTCTTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVGDVSC*GSSWAK
Trigger: CTTGGCCCAAGAGCTACCCCAGCAGCTGACATCCCC...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp AGCGGTCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGTGCCCAGCTTGGCTCTaGAAGAACCGAGGGTCGTCT +
Preference number: 4 (lower is better)
Translates to: SGLWDSASCLGWGGLAGWCPAWL*KNRGSS
Trigger: AGACGACCCTCGGTTCTTCCAGAGCCAAGCTGGGCA...CCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGACCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGCCGCCCCCACGGCCGTaGATACTGGTGAAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMPPPRP*ILVKAC
Trigger: GCAAGCCTTCACCAGTATCCACGGCCGTGGGGGCGG...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGCGTTGCAGGCCTCCCTaGGAGCTACAGGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMRCRPP*ELQAAS
Trigger: CGAGGCTGCCTGTAGCTCCCAGGGAGGCCTGCAACG...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTGGGCCTCCACTGTGCTaGTCAGTCCCTGTTCAAGCC +
Preference number: 4 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVGPPLC*SVPVQA
Trigger: GGCTTGAACAGGGACTGACCAGCACAGTGGAGGCCC...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp CAAGCCGCTGCGGTAGAGGGTCTCATTATCGGGCAGACAGACCGGGAGGACGTTTCTGGGCAATGGGGGTaGCTGGCCGTCCGCAGACAG +
Preference number: 4 (lower is better)
Translates to: QAAAVEGLIIGQTDREDVSGQWG*LAVRRQ
Trigger: CTGTCTGCGGACGGCCAGTCACCCCCATTGCCCAGA...AACGTCCTCCCGGTCTGTCTGCCCGATAATGAGACCCTCTACCGCAGCGGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp AGCGGTCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGAAGCAGCCACCACATTaGGCCTGGACAGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: SGLWDSASCLGWGGLAGWKQPPH*AWTAFG
Trigger: TCCAAAGGCTGTCCAGGCGCAATGTGGTGGCTGCTT...CCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGACCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp CAAGCCGCTGCGGTAGAGGGTCTCATTATCGGGCAGACAGACCGGGAGGACGTTCCGGGGGATGTCAGCTaGTGGGGTAGCTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: QAAAVEGLIIGQTDREDVPGDVS*WGSSWA
Trigger: GGCCCAAGAGCTACCCCAGCAGCTGACATCCCCCGG...AACGTCCTCCCGGTCTGTCTGCCCGATAATGAGACCCTCTACCGCAGCGGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp CGCGGCCTGATAATAGGGCTCCTGGCAGTGGTTCTGGACCTTGGCAGGGTTGTCTCTGACCAGGGGGCCTaGCCAGAGGGGAGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: RGLIIGLLAVVLDLGRVVSDQGA*PEGSLA
Trigger: AGCAAGGCTCCCCTCTGGGCAGGCCCCCTGGTCAGA...GACAACCCTGCCAAGGTCCAGAACCACTGCCAGGAGCCCTATTATCAGGCCGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR GCA 90 bp CGCTGCGGTAGAGGGTCTCATTATCGGGCAGACAGACCGGGAGGACGTTGGGGCCCGAGGAAGGCTGTGTaGGGAAGGTCAGCCGCAAAC +
Preference number: 4 (lower is better)
Translates to: RCGRGSHYRADRPGGRWGPRKAV*GRSAAN
Trigger: GTTTGCGGCTGACCTTCCGCACACAGCCTTCCTCGG...GCCCCAACGTCCTCCCGGTCTGTCTGCCCGATAATGAGACCCTCTACCGCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTCTGGGGCCTCCACTGTaGTGGTCAGTCCCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVLGPPL*WSVPVQ
Trigger: TTGAACAGGGACTGACCAGCACAGTGGAGGCCCCAG...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTCCACCACATTGCGCCTaGACAGCCTTTGGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVPPHCA*TAFGVR
Trigger: CCTCACTCCAAAGGCTGTCCAGGCGCAATGTGGTGG...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTGGAAGTTGCCCAGCTTaGCTCTGGAAGAACCGAGGG +
Preference number: 4 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVGSCPA*LWKNRG
Trigger: CCCTCGGTTCTTCCAGAGCCAAGCTGGGCAACTTCC...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTTGCACAACGACACGGTaGACAGGGTGGTTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVCTTTR*TGWFPS
Trigger: ACTGGGGAACCACCCTGTCCACCGTGTCGTTGTGCA...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CTCCATGCCAAACCCACTGACGTAGCCCAACAAGCCGCTGCGGTAGAGGGTCTCCGTTGCAGGCCTCCCTaGGAGCTACAGGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: LHAKPTDVAQQAAAVEGLRCRPP*ELQAAS
Trigger: CGAGGCTGCCTGTAGCTCCCAGGGAGGCCTGCAACG...GAGACCCTCTACCGCAGCGGCTTGTTGGGCTACGTCAGTGGGTTTGGCATGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGACTCTGCTTCCTGTCTaGGATGGGGCGGGCTTGCCG +
Preference number: 4 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMTLLPV*DGAGLP
Trigger: CGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGT...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTAGCCTCCCGAGTAGCTaGGACTACAGGCACGTGTCA +
Preference number: 4 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVSLPSS*DYRHVS
Trigger: TGACACGTGCCTGTAGTCCCAGCTACTCGGGAGGCT...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp CGCTGCGGTAGAGGGTCTCATTATCGGGCAGACAGACCGGGAGGACGTTGGGGCCCCTGCTGGCCTCGCTaGTGGGCTGACTATAGTTCA +
Preference number: 4 (lower is better)
Translates to: RCGRGSHYRADRPGGRWGPCWPR*WADYSS
Trigger: TGAACTATAGTCAGCCCATCAGCGAGGCCAGCAGGG...GCCCCAACGTCCTCCCGGTCTGTCTGCCCGATAATGAGACCCTCTACCGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR TCA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTCAGACAGGCATACACTaGAGAACCTCCTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVQTGIH*RTSSPS
Trigger: GGATGGGGAGGAGGTTCTTCAGTGTATGCCTGTCTG...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGGGCCGTGGATACTGGTaGAGGCTTGCCAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMGRGYW*RLARGS
Trigger: ACTTCCCCTGGCAAGCCTTCACCAGTATCCACGGCC...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGCCATGCCAAACCCACTaGCGTAGCCCAACAAGCCGC +
Preference number: 4 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMPCQTH*RSPTSR
Trigger: GCGGCTTGTTGGGCTACGTCAGTGGGTTTGGCATGG...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGGGGAGGGAAAGCGGGTaGCACAGCAGGTTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMGRESG*HSRLEE
Trigger: CTCCTCTAACCTGCTGTGTCACCCGCTTTCCCTCCC...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp CTACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATCCACCGGGGGATGTCAGCTaGTGGGGTAGCTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: LRLSLNRVACQQGQGWDPPGDVS*WGSSWA
Trigger: GGCCCAAGAGCTACCCCAGCAGCTGACATCCCCCGG...TGGATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR GCA 90 bp TACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATCCAGCCGGGGGATGTCAGCTaGTGGGGTAGCTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: YGCLLIGLLASRGRAGIQPGDVS*WGSSWA
Trigger: GGCCCAAGAGCTACCCCAGCAGCTGACATCCCCCGG...CTGGATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR GCA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGTGTGACAGAGTCCCCTaGACAGTCCTGGGACGGCTC +
Preference number: 4 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMCDRVP*TVLGRL
Trigger: GAGCCGTCCCAGGACTGTGCAGGGGACTCTGTCACA...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp CTACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATCCATCTGACCAGGGGGCCTaGCCAGAGGGGAGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LRLSLNRVACQQGQGWDPSDQGA*PEGSLA
Trigger: AGCAAGGCTCCCCTCTGGGCAGGCCCCCTGGTCAGA...TGGATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR GCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGCCCAGGGGGATGCTGTaGTGCAGCTCCAGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLPRGML*CSSRRA
Trigger: CGCCCTCCTGGAGCTGCAGCACAGCATCCCCCTGGG...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp AGCGGTCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGAGCCCAACAAGCCGCTaGGGTAGAGGGTCTCATTAT +
Preference number: 4 (lower is better)
Translates to: SGLWDSASCLGWGGLAGWSPTSR*GRGSHY
Trigger: ATAATGAGACCCTCTACCGCAGCGGCTTGTTGGGCT...CCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGACCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp CATTATCGGGCAGACAGACCGGGAGGACGTTGGGGCCCAGGGGGATGCTGTGCTCCCTGGCAGACACTGTaGCTTTGCGTCTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: HYRADRPGGRWGPGGCCAPWQTL*LCVSSP
Trigger: TGGGGATGAGACGCAAAGGCACAGTGTCTGCCAGGG...AGCACAGCATCCCCCTGGGCCCCAACGTCCTCCCGGTCTGTCTGCCCGATAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp AGCGGTCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGAGAACTTCAGTCCAGTaGTGGGCTCACCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SGLWDSASCLGWGGLAGWRTSVQ*WAHLAS
Trigger: AGAAGCCAGGTGAGCCCAGCACTGGACTGAAGTTCT...CCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGACCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp CACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGCAGGCCTGAGGGAGCCCGCGTCATaGACAGCAGGGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: HTEGARSTNAWRVSPAGLREPAS*TAGRGG
Trigger: CCCTCCCCTCCCTGCTGTGCATGACGCGGGCTCCCT...CAGGCCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR GCA 90 bp CGCTGCGGTAGAGGGTCTCATTATCGGGCAGACAGACCGGGAGGACGTTGGGGCTGGACATCTGGGACCTaGGAGAGAACTGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RCGRGSHYRADRPGGRWGWTSGT*ERTGPG
Trigger: TCCTGGGCCAGTTCTCTCGCAGGTCCCAGATGTCCA...GCCCCAACGTCCTCCCGGTCTGTCTGCCCGATAATGAGACCCTCTACCGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTAAGCCCTTGTGGAGGTaGGCAGTCTTGTTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVKPLWR*AVLFSE
Trigger: CTCGGAGAACAAGACTGCCCACCTCCACAAGGGCTT...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTTCCTGGCAGTGGTTCTaGACCTTGGCAGGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVSWQWF*TLAGLS
Trigger: AGACAACCCTGCCAAGGTCCAGAACCACTGCCAGGA...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CGGGGTGCACAACGACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATCCGCCCCCACGGCCGTaGATACTGGTGAAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: RGAQRHGGQGGSPVSASHPPPRP*ILVKAC
Trigger: GCAAGCCTTCACCAGTATCCACGGCCGTGGGGGCGG...ATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGTCGTTGTGCACCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTACACGGTGGACAGGGTaGTTCCCCAGTTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVTRWTG*FPSFSI
Trigger: GATGCTGAAACTGGGGAACCACCCTGTCCACCGTGT...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTGTCACACACCAGCTGTaGGACTTGGGCAAGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVVTHQL*DLGKSL
Trigger: AAGGGACTTGCCCAAGTCCCACAGCTGGTGTGTGAC...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGAGTGCTGGGCTCACCTaGCTTCTGCAGGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMSAGLT*LLQEMG
Trigger: CCCCATCTCCTGCAGAAGCCAGGTGAGCCCAGCACT...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp AGCGGTCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGCTGGACTTCAACTCCTaGGCTCAAGCGATCCTCTTG +
Preference number: 4 (lower is better)
Translates to: SGLWDSASCLGWGGLAGWLDFNS*AQAILL
Trigger: CAAGAGGATCGCTTGAGCCCAGGAGTTGAAGTCCAG...CCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGACCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTGGACAGCCTTTGGAGTaGGGGCTTCTCCAGAGATAT +
Preference number: 4 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVGQPLE*GLLQRY
Trigger: ATATCTCTGGAGAAGCCCTCACTCCAAAGGCTGTCC...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTATCCGAACCGACGAATaGGATTGTGACAGAGTCCCC +
Preference number: 4 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVIRTDE*DCDRVP
Trigger: GGGGACTCTGTCACAATCTCATTCGTCGGTTCGGAT...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp CTCCATGCCAAACCCACTGACGTAGCCCAACAAGCCGCTGCGGTAGAGGGTCTCGATACAAACTCCCTCTaGCCAGGGGGCCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LHAKPTDVAQQAAAVEGLDTNSL*PGGLPR
Trigger: TCTGGGCAGGCCCCCTGGTCAGAGGGAGTTTGTATC...GAGACCCTCTACCGCAGCGGCTTGTTGGGCTACGTCAGTGGGTTTGGCATGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR TCA 90 bp CATTATCGGGCAGACAGACCGGGAGGACGTTGGGGCCCAGGGGGATGCTGTGCTCCGCAAACTCCTCCCTaGGGATACAAACTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: HYRADRPGGRWGPGGCCAPQTPP*GYKLPL
Trigger: CAGAGGGAGTTTGTATCCTCAGGGAGGAGTTTGCGG...AGCACAGCATCCCCCTGGGCCCCAACGTCCTCCCGGTCTGTCTGCCCGATAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR TCA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGCCCTGCTGGCCTCGCTaGTGGGCTGACTATAGTTCA +
Preference number: 4 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMPCWPR*WADYSS
Trigger: TGAACTATAGTCAGCCCATCAGCGAGGCCAGCAGGG...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCTCTGGGCAATGGGGGTaGCTGGCCGTCCGCAGACAG +
Preference number: 4 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLSGQWG*LAVRRQ
Trigger: CTGTCTGCGGACGGCCAGTCACCCCCATTGCCCAGA...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGTCTGGGCAATGGGGGTaGCTGGCCGTCCGCAGACAG +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLSGQWG*LAVRRQ
Trigger: CTGTCTGCGGACGGCCAGTCACCCCCATTGCCCAGA...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp CAAGCCGCTGCGGTAGAGGGTCTCATTATCGGGCAGACAGACCGGGAGGACGTTGAACCGAGGGTCGTCTaGTTCTGGGCAATGGGGGTG +
Preference number: 4 (lower is better)
Translates to: QAAAVEGLIIGQTDREDVEPRVV*FWAMGV
Trigger: CACCCCCATTGCCCAGAATCAGACGACCCTCGGTTC...AACGTCCTCCCGGTCTGTCTGCCCGATAATGAGACCCTCTACCGCAGCGGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR TCA 90 bp CCAGCCCATCTCCATGCCAAACCCACTGACGTAGCCCAACAAGCCGCTGCGGTAGGCCGTGGATACTGGTaGAGGCTTGCCAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: PAHLHAKPTDVAQQAAAVGRGYW*RLARGS
Trigger: ACTTCCCCTGGCAAGCCTTCACCAGTATCCACGGCC...TACCGCAGCGGCTTGTTGGGCTACGTCAGTGGGTTTGGCATGGAGATGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR TCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGCAGGGAGGTAGAGGGTaGGGAGGAGCGGTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLQGGRG*GGAVCG
Trigger: CCCACAGACCGCTCCTCCTCACCCTCTACCTCCCTG...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp GGGAATGGAGCCTCCTGCCCTGCAGAACAGGGCCGGCACCAGGAGGTACAAGAGCGGAGGGCTGGTCTGTaGTGGGATCAGCATATGATC +
Preference number: 4 (lower is better)
Translates to: GNGASCPAEQGRHQEVQERRAGL*WDQHMI
Trigger: GATCATATGCTGATCCCATCACAGACCAGCCCTCCG...CTCTTGTACCTCCTGGTGCCGGCCCTGTTCTGCAGGGCAGGAGGCTCCATTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR TCA 90 bp CAAGCCGCTGCGGTAGAGGGTCTCATTATCGGGCAGACAGACCGGGAGGACGTTCTGGGGTTGCACAGGTaGGTGCCCCTGTGGCGTAAA +
Preference number: 4 (lower is better)
Translates to: QAAAVEGLIIGQTDREDVLGLHR*VPLWRK
Trigger: TTTACGCCACAGGGGCACTCACCTGTGCAACCCCAG...AACGTCCTCCCGGTCTGTCTGCCCGATAATGAGACCCTCTACCGCAGCGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp CATTATCGGGCAGACAGACCGGGAGGACGTTGGGGCCCAGGGGGATGCTGTGCTAAGCAGCCACCACATTaGGCCTGGACAGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: HYRADRPGGRWGPGGCCAKQPPH*AWTAFG
Trigger: TCCAAAGGCTGTCCAGGCGCAATGTGGTGGCTGCTT...AGCACAGCATCCCCCTGGGCCCCAACGTCCTCCCGGTCTGTCTGCCCGATAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp CCAGCCCATCTCCATGCCAAACCCACTGACGTAGCCCAACAAGCCGCTGCGGTATGTGACAGAGTCCCCTaGACAGTCCTGGGACGGCTC +
Preference number: 4 (lower is better)
Translates to: PAHLHAKPTDVAQQAAAVCDRVP*TVLGRL
Trigger: GAGCCGTCCCAGGACTGTGCAGGGGACTCTGTCACA...TACCGCAGCGGCTTGTTGGGCTACGTCAGTGGGTTTGGCATGGAGATGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCTCTGACCAGGGGGCCTaGCCAGAGGGGAGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLSDQGA*PEGSLA
Trigger: AGCAAGGCTCCCCTCTGGGCAGGCCCCCTGGTCAGA...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp ATAATAGGGCTCCTGGCAGTGGTTCTGGACCTTGGCAGGGTTGTCTCCAGGTGCTCTGACCAGGGGGCCTaGCCAGAGGGGAGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: IIGLLAVVLDLGRVVSRCSDQGA*PEGSLA
Trigger: AGCAAGGCTCCCCTCTGGGCAGGCCCCCTGGTCAGA...GCACCTGGAGACAACCCTGCCAAGGTCCAGAACCACTGCCAGGAGCCCTATTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR GCA 90 bp TTCTGGACCTTGGCAGGGTTGTCTCCAGGTGCGTTGATGGCCTCAGAGCCCCTGCCGAGGAAGGCTGTGTaGGGAAGGTCAGCCGCAAAC +
Preference number: 4 (lower is better)
Translates to: FWTLAGLSPGALMASEPLPRKAV*GRSAAN
Trigger: GTTTGCGGCTGACCTTCCGCACACAGCCTTCCTCGG...CAGGGGCTCTGAGGCCATCAACGCACCTGGAGACAACCCTGCCAAGGTCCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR GCA 90 bp GGCCTGATAATAGGGCTCCTGGCAGTGGTTCTGGACCTTGGCAGGGTTGTCTCCGGTGAGTGCCCCTGCTaGCGCGGCCTGATAATAGGG +
Preference number: 4 (lower is better)
Translates to: GLIIGLLAVVLDLGRVVSGECPC*RGLIIG
Trigger: CCCTATTATCAGGCCGCGGCAGCAGGGGCACTCACC...GGAGACAACCCTGCCAAGGTCCAGAACCACTGCCAGGAGCCCTATTATCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR GCA 90 bp CAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGCAGGCCAGGTCCCTGGGGTTaGACAGGTGAGTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: QAHRRCKIHQRLEGFSSRPGPWG*TGECPC
Trigger: GCAGGGGCACTCACCTGTGCAACCCCAGGGACCTGG...CCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR GCA 90 bp CCTGATAATAGGGCTCCTGGCAGTGGTTCTGGACCTTGGCAGGGTTGTCTCCAGCCAGGTCCCTGGGGTTaGACAGGTGAGTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: PDNRAPGSGSGPWQGCLQPGPWG*TGECPC
Trigger: GCAGGGGCACTCACCTGTGCAACCCCAGGGACCTGG...CTGGAGACAACCCTGCCAAGGTCCAGAACCACTGCCAGGAGCCCTATTATCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR GCA 90 bp AATGCCCGTGGCCACCCAGTGATGGGCATGATTGTCCCATACCACATAGACGCTCCCAGGGGGATGCTGTaGTGCAGCTCCAGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: NARGHPVMGMIVPYHIDAPRGML*CSSRRA
Trigger: CGCCCTCCTGGAGCTGCAGCACAGCATCCCCCTGGG...AGCGTCTATGTGGTATGGGACAATCATGCCCATCACTGGGTGGCCACGGGCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp CCAGCCCATCTCCATGCCAAACCCACTGACGTAGCCCAACAAGCCGCTGCGGTATTTGGAGCCAGGCGTTaGAGGCCTCCCTGGGAGCTA +
Preference number: 4 (lower is better)
Translates to: PAHLHAKPTDVAQQAAAVFGARR*RPPWEL
Trigger: TAGCTCCCAGGGAGGCCTGCAACGCCTGGCTCCAAA...TACCGCAGCGGCTTGTTGGGCTACGTCAGTGGGTTTGGCATGGAGATGGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTCACAGGTGGGGTGTCTaGAAGAACTTCAGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVHRWGV*KNFSPV
Trigger: CACTGGACTGAAGTTCTTGCAGACACCCCACCTGTG...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp AGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGCAGGCGGGAATGGAGCCTCCTaGCCTGCAGAACAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: RHTEGARSTNAWRVSPAGGNGAS*PAEQGR
Trigger: CCGGCCCTGTTCTGCAGGGCAGGAGGCTCCATTCCC...GCCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR GCA 90 bp CGCTGCGGTAGAGGGTCTCATTATCGGGCAGACAGACCGGGAGGACGTTGGGGCGGTTGCACAGGTGAGTaGCCCTGTGGCGTAAATGAG +
Preference number: 4 (lower is better)
Translates to: RCGRGSHYRADRPGGRWGGCTGE*PCGVNE
Trigger: CTCATTTACGCCACAGGGGCACTCACCTGTGCAACC...GCCCCAACGTCCTCCCGGTCTGTCTGCCCGATAATGAGACCCTCTACCGCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp CGCTGCGGTAGAGGGTCTCATTATCGGGCAGACAGACCGGGAGGACGTTGGGGCCACAGCAAAGCCCTCTaGAGCCTTGATGTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: RCGRGSHYRADRPGGRWGHSKAL*SLDVRA
Trigger: AGCACGGACATCAAGGCTCCAGAGGGCTTTGCTGTG...GCCCCAACGTCCTCCCGGTCTGTCTGCCCGATAATGAGACCCTCTACCGCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp CAGTGGTTCTGGACCTTGGCAGGGTTGTCTCCAGGTGCGTTGATGGCCTCAGAGTCCCCTGCACAGTCCTaGGACGGCTCCAGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: QWFWTLAGLSPGALMASESPAQS*DGSRSK
Trigger: CTTCGACCTGGAGCCGTCCCAGGACTGTGCAGGGGA...CTCTGAGGCCATCAACGCACCTGGAGACAACCCTGCCAAGGTCCAGAACCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR CCA 90 bp CTACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATCCATCCCCTGCACAGTCCTaGGACGGCTCCAGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: LRLSLNRVACQQGQGWDPSPAQS*DGSRSK
Trigger: CTTCGACCTGGAGCCGTCCCAGGACTGTGCAGGGGA...TGGATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CCA 90 bp ATAGGGCTCCTGGCAGTGGTTCTGGACCTTGGCAGGGTTGTCTCCAGGTGCGTTTCCCCTGCACAGTCCTaGGACGGCTCCAGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: IGLLAVVLDLGRVVSRCVSPAQS*DGSRSK
Trigger: CTTCGACCTGGAGCCGTCCCAGGACTGTGCAGGGGA...AACGCACCTGGAGACAACCCTGCCAAGGTCCAGAACCACTGCCAGGAGCCCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR CCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGCCGCCCCCACGGCCGTaGATACTGGTGAAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLPPPRP*ILVKAC
Trigger: GCAAGCCTTCACCAGTATCCACGGCCGTGGGGGCGG...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CACCCAGTGATGGGCATGATTGTCCCATACCACATAGACGCTGCCACTGTCCCCAGACCGGGAGGACGTTaGGGCCCAGGGGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: HPVMGMIVPYHIDAATVPRPGGR*GPGGCC
Trigger: ACAGCATCCCCCTGGGCCCCAACGTCCTCCCGGTCT...GGGGACAGTGGCAGCGTCTATGTGGTATGGGACAATCATGCCCATCACTGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGGGCGGGCTTGCCGGGTaGGGGTTTCTCTTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLGGLAG*GFLLQW
Trigger: CCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp AGCGGTCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGAGTATTGCAGCACACTaGGAAGAGCACAGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SGLWDSASCLGWGGLAGWSIAAH*EEHSLC
Trigger: GCAGAGACTGTGCTCTTCCCAGTGTGCTGCAATACT...CCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGACCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTAAAATGGTAAGGATGTaGGGGCTGGGAGGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVKMVRM*GLGGKA
Trigger: CGCTTTCCCTCCCAGCCCCCACATCCTTACCATTTT...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp CGCTGCGGTAGAGGGTCTCATTATCGGGCAGACAGACCGGGAGGACGTTGGGGCCGACGAATGAGATTGTaGCAGAGTCCCCTGCACAGT +
Preference number: 4 (lower is better)
Translates to: RCGRGSHYRADRPGGRWGRRMRL*QSPLHS
Trigger: ACTGTGCAGGGGACTCTGTCACAATCTCATTCGTCG...GCCCCAACGTCCTCCCGGTCTGTCTGCCCGATAATGAGACCCTCTACCGCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR TCA 90 bp CCCCTGCTGCCGCGGCCTGATAATAGGGCTCCTGGCAGTGGTTCTGGACCTTGGCGACGAATGAGATTGTaGCAGAGTCCCCTGCACAGT +
Preference number: 4 (lower is better)
Translates to: PLLPRPDNRAPGSGSGPWRRMRL*QSPLHS
Trigger: ACTGTGCAGGGGACTCTGTCACAATCTCATTCGTCG...CCAAGGTCCAGAACCACTGCCAGGAGCCCTATTATCAGGCCGCGGCAGCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR TCA 90 bp CTCCATGCCAAACCCACTGACGTAGCCCAACAAGCCGCTGCGGTAGAGGGTCTCAGAGGGGAGCCTTGCTaGCCACAGAACTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: LHAKPTDVAQQAAAVEGLRGEPC*PQNWLG
Trigger: TCCAAGCCAGTTCTGTGGTCAGCAAGGCTCCCCTCT...GAGACCCTCTACCGCAGCGGCTTGTTGGGCTACGTCAGTGGGTTTGGCATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR TCA 90 bp CGGGGTGCACAACGACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATGATACAAACTCCCTCTaGCCAGGGGGCCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: RGAQRHGGQGGSPVSASHDTNSL*PGGLPR
Trigger: TCTGGGCAGGCCCCCTGGTCAGAGGGAGTTTGTATC...ATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGTCGTTGTGCACCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR TCA 90 bp CAGTGGTTCTGGACCTTGGCAGGGTTGTCTCCAGGTGCGTTGATGGCCTCAGAGGATACAAACTCCCTCTaGCCAGGGGGCCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: QWFWTLAGLSPGALMASEDTNSL*PGGLPR
Trigger: TCTGGGCAGGCCCCCTGGTCAGAGGGAGTTTGTATC...CTCTGAGGCCATCAACGCACCTGGAGACAACCCTGCCAAGGTCCAGAACCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR TCA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTCACTCTGGTTCTTCCTaGGAGAAACACTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVHSGSS*EKHCPW
Trigger: CCAAGGACAGTGTTTCTCTCAGGAAGAACCAGAGTG...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp CGGGGTGCACAACGACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATCCATGCCAAACCCACTaGCGTAGCCCAACAAGCCGC +
Preference number: 4 (lower is better)
Translates to: RGAQRHGGQGGSPVSASHPCQTH*RSPTSR
Trigger: GCGGCTTGTTGGGCTACGTCAGTGGGTTTGGCATGG...ATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGTCGTTGTGCACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR TCA 90 bp GCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCAGCTACCAGCCCAGGTGTCCCTaGGTCCCCAGCCTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: ANTGPVNLHGNNRWGLSYQPRCP*VPSLSC
Trigger: ACAGCTGAGGCTGGGGACTCAGGGACACCTGGGCTG...GTAGCTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR GCA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGAAGCAGCCACCACATTaGGCCTGGACAGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMKQPPH*AWTAFG
Trigger: TCCAAAGGCTGTCCAGGCGCAATGTGGTGGCTGCTT...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGTGCTCTCTTGGCCTTTaGCATACGGCTCTGGGTACC +
Preference number: 4 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMCSLGL*HTALGT
Trigger: GGTACCCAGAGCCGTATGGCAAAGGCCAAGAGAGCA...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp CAGCTACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATTGTGACAGAGTCCCCTaGACAGTCCTGGGACGGCTC +
Preference number: 4 (lower is better)
Translates to: QLRLSLNRVACQQGQGWDCDRVP*TVLGRL
Trigger: GAGCCGTCCCAGGACTGTGCAGGGGACTCTGTCACA...ATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR GCA 90 bp TCTGCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCAGCTCTGACCAGGGGGCCTaGCCAGAGGGGAGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: SANTGPVNLHGNNRWGLSSDQGA*PEGSLA
Trigger: AGCAAGGCTCCCCTCTGGGCAGGCCCCCTGGTCAGA...GCTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR GCA 90 bp ACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGCAGGCCTGTTCTGACCAGGGGGCCTaGCCAGAGGGGAGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: TQKVQDPPTLGGFLQQACSDQGA*PEGSLA
Trigger: AGCAAGGCTCCCCTCTGGGCAGGCCCCCTGGTCAGA...ACAGGCCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR GCA 90 bp CCAGCCCATCTCCATGCCAAACCCACTGACGTAGCCCAACAAGCCGCTGCGGTAAGGGTTGTCTCCAGGTaGGTTGATGGCCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PAHLHAKPTDVAQQAAAVRVVSR*VDGLRA
Trigger: GGCTCTGAGGCCATCAACGCACCTGGAGACAACCCT...TACCGCAGCGGCTTGTTGGGCTACGTCAGTGGGTTTGGCATGGAGATGGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp CGCGGCCTGATAATAGGGCTCCTGGCAGTGGTTCTGGACCTTGGCAGGGTTGTCAGGGTTGTCTCCAGGTaGGTTGATGGCCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: RGLIIGLLAVVLDLGRVVRVVSR*VDGLRA
Trigger: GGCTCTGAGGCCATCAACGCACCTGGAGACAACCCT...GACAACCCTGCCAAGGTCCAGAACCACTGCCAGGAGCCCTATTATCAGGCCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR GCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGGGTGAGTGCCCCTGCTaGCGCGGCCTGATAATAGGG +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLGECPC*RGLIIG
Trigger: CCCTATTATCAGGCCGCGGCAGCAGGGGCACTCACC...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp TTTCTCAAGGCCCGTGTTGAATCCTGGGCTCTCCCGACAGCGTCTTCGTGCACTGGTGAGTGCCCCTGCTaGCGCGGCCTGATAATAGGG +
Preference number: 4 (lower is better)
Translates to: FLKARVESWALPTASSCTGECPC*RGLIIG
Trigger: CCCTATTATCAGGCCGCGGCAGCAGGGGCACTCACC...AGTGCACGAAGACGCTGTCGGGAGAGCCCAGGATTCAACACGGGCCTTGAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR CCA 90 bp CTCCATGCCAAACCCACTGACGTAGCCCAACAAGCCGCTGCGGTAGAGGGTCTCCCACCACATTGCGCCTaGACAGCCTTTGGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: LHAKPTDVAQQAAAVEGLPPHCA*TAFGVR
Trigger: CCTCACTCCAAAGGCTGTCCAGGCGCAATGTGGTGG...GAGACCCTCTACCGCAGCGGCTTGTTGGGCTACGTCAGTGGGTTTGGCATGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGTCCGTGCTGCTCTCTTaGCCTTTGCCATACGGCTCT +
Preference number: 4 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMSVLLS*PLPYGS
Trigger: AGAGCCGTATGGCAAAGGCCAAGAGAGCAGCACGGA...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCTCCCCTGCACAGTCCTaGGACGGCTCCAGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLSPAQS*DGSRSK
Trigger: CTTCGACCTGGAGCCGTCCCAGGACTGTGCAGGGGA...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGTCCCCTGCACAGTCCTaGGACGGCTCCAGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLSPAQS*DGSRSK
Trigger: CTTCGACCTGGAGCCGTCCCAGGACTGTGCAGGGGA...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGAAGCCCTTGTGGAGGTaGGCAGTCTTGTTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMKPLWR*AVLFSE
Trigger: CTCGGAGAACAAGACTGCCCACCTCCACAAGGGCTT...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp TGCCCCTGCTGCCGCGGCCTGATAATAGGGCTCCTGGCAGTGGTTCTGGACCTTTCCTGGCAGTGGTTCTaGACCTTGGCAGGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: CPCCRGLIIGLLAVVLDLSWQWF*TLAGLS
Trigger: AGACAACCCTGCCAAGGTCCAGAACCACTGCCAGGA...AAGGTCCAGAACCACTGCCAGGAGCCCTATTATCAGGCCGCGGCAGCAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR CCA 90 bp CACCCAGTGATGGGCATGATTGTCCCATACCACATAGACGCTGCCACTGTCCCCGGCAATGGGGGTGACTaGCCGTCCGCAGACAGGCAT +
Preference number: 4 (lower is better)
Translates to: HPVMGMIVPYHIDAATVPGNGGD*PSADRH
Trigger: ATGCCTGTCTGCGGACGGCCAGTCACCCCCATTGCC...GGGGACAGTGGCAGCGTCTATGTGGTATGGGACAATCATGCCCATCACTGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp CTCCATGCCAAACCCACTGACGTAGCCCAACAAGCCGCTGCGGTAGAGGGTCTCTGCCCAGCTTGGCTCTaGAAGAACCGAGGGTCGTCT +
Preference number: 4 (lower is better)
Translates to: LHAKPTDVAQQAAAVEGLCPAWL*KNRGSS
Trigger: AGACGACCCTCGGTTCTTCCAGAGCCAAGCTGGGCA...GAGACCCTCTACCGCAGCGGCTTGTTGGGCTACGTCAGTGGGTTTGGCATGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp GACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGCTGTGTGAGACCGGGAGGACGTTaGGGCCCAGGGGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: DTVDRVVPQFQHLIYGCVRPGGR*GPGGCC
Trigger: ACAGCATCCCCCTGGGCCCCAACGTCCTCCCGGTCT...CACACAGCCATAGATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp ACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGCTGTGTGGCGTTGCAGGCCTCCCTaGGAGCTACAGGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: TRWTGWFPSFSISSMAVWRCRPP*ELQAAS
Trigger: CGAGGCTGCCTGTAGCTCCCAGGGAGGCCTGCAACG...CCACACAGCCATAGATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp TACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATCCAGTACCAGGGTCATGGCTaGGAACAGAGGCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: YGCLLIGLLASRGRAGIQYQGHG*EQRLPP
Trigger: GGGAGGGAGCCTCTGTTCCCAGCCATGACCCTGGTA...CTGGATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR TCA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGGGACAGCCTTTGGAGTaGGGGCTTCTCCAGAGATAT +
Preference number: 4 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMGQPLE*GLLQRY
Trigger: ATATCTCTGGAGAAGCCCTCACTCCAAAGGCTGTCC...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp TACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATCCAGAGAGGGGAGCCTTGCTaGCCACAGAACTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: YGCLLIGLLASRGRAGIQRGEPC*PQNWLG
Trigger: TCCAAGCCAGTTCTGTGGTCAGCAAGGCTCCCCTCT...CTGGATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR TCA 90 bp ATAGGGCTCCTGGCAGTGGTTCTGGACCTTGGCAGGGTTGTCTCCAGGTGCGTTAGAGGGGAGCCTTGCTaGCCACAGAACTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: IGLLAVVLDLGRVVSRCVRGEPC*PQNWLG
Trigger: TCCAAGCCAGTTCTGTGGTCAGCAAGGCTCCCCTCT...AACGCACCTGGAGACAACCCTGCCAAGGTCCAGAACCACTGCCAGGAGCCCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR TCA 90 bp CAGCTACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATAGAGGGGAGCCTTGCTaGCCACAGAACTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: QLRLSLNRVACQQGQGWDRGEPC*PQNWLG
Trigger: TCCAAGCCAGTTCTGTGGTCAGCAAGGCTCCCCTCT...ATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR TCA 90 bp GGCCTGATAATAGGGCTCCTGGCAGTGGTTCTGGACCTTGGCAGGGTTGTCTCCAGAGGGGAGCCTTGCTaGCCACAGAACTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: GLIIGLLAVVLDLGRVVSRGEPC*PQNWLG
Trigger: TCCAAGCCAGTTCTGTGGTCAGCAAGGCTCCCCTCT...GGAGACAACCCTGCCAAGGTCCAGAACCACTGCCAGGAGCCCTATTATCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR TCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGGATACAAACTCCCTCTaGCCAGGGGGCCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLDTNSL*PGGLPR
Trigger: TCTGGGCAGGCCCCCTGGTCAGAGGGAGTTTGTATC...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp ATAATAGGGCTCCTGGCAGTGGTTCTGGACCTTGGCAGGGTTGTCTCCAGGTGCGATACAAACTCCCTCTaGCCAGGGGGCCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: IIGLLAVVLDLGRVVSRCDTNSL*PGGLPR
Trigger: TCTGGGCAGGCCCCCTGGTCAGAGGGAGTTTGTATC...GCACCTGGAGACAACCCTGCCAAGGTCCAGAACCACTGCCAGGAGCCCTATTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR TCA 90 bp CGGCCTGATAATAGGGCTCCTGGCAGTGGTTCTGGACCTTGGCAGGGTTGTCTCCCCTGCTGGCCTCGCTaGTGGGCTGACTATAGTTCA +
Preference number: 4 (lower is better)
Translates to: RPDNRAPGSGSGPWQGCLPCWPR*WADYSS
Trigger: TGAACTATAGTCAGCCCATCAGCGAGGCCAGCAGGG...GAGACAACCCTGCCAAGGTCCAGAACCACTGCCAGGAGCCCTATTATCAGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR TCA 90 bp CTCCATGCCAAACCCACTGACGTAGCCCAACAAGCCGCTGCGGTAGAGGGTCTCCAGACAGGCATACACTaGAGAACCTCCTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: LHAKPTDVAQQAAAVEGLQTGIH*RTSSPS
Trigger: GGATGGGGAGGAGGTTCTTCAGTGTATGCCTGTCTG...GAGACCCTCTACCGCAGCGGCTTGTTGGGCTACGTCAGTGGGTTTGGCATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR TCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGGAACCGAGGGTCGTCTaGTTCTGGGCAATGGGGGTG +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLEPRVV*FWAMGV
Trigger: CACCCCCATTGCCCAGAATCAGACGACCCTCGGTTC...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCGGCCGTGGATACTGGTaGAGGCTTGCCAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLGRGYW*RLARGS
Trigger: ACTTCCCCTGGCAAGCCTTCACCAGTATCCACGGCC...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCGGGAGGGAAAGCGGGTaGCACAGCAGGTTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLGRESG*HSRLEE
Trigger: CTCCTCTAACCTGCTGTGTCACCCGCTTTCCCTCCC...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp GGAGCTACAGGCAGCCTCGAGTACTTCAGCTCAGTAGTTAGCCAGCCCATCTCCCTGGGGTTGCACAGGTaGGTGCCCCTGTGGCGTAAA +
Preference number: 4 (lower is better)
Translates to: GATGSLEYFSSVVSQPISLGLHR*VPLWRK
Trigger: TTTACGCCACAGGGGCACTCACCTGTGCAACCCCAG...GGAGATGGGCTGGCTAACTACTGAGCTGAAGTACTCGAGGCTGCCTGTAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp CAAGCCGCTGCGGTAGAGGGTCTCATTATCGGGCAGACAGACCGGGAGGACGTTTGCTCTCTTGGCCTTTaGCATACGGCTCTGGGTACC +
Preference number: 4 (lower is better)
Translates to: QAAAVEGLIIGQTDREDVCSLGL*HTALGT
Trigger: GGTACCCAGAGCCGTATGGCAAAGGCCAAGAGAGCA...AACGTCCTCCCGGTCTGTCTGCCCGATAATGAGACCCTCTACCGCAGCGGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCTGTGACAGAGTCCCCTaGACAGTCCTGGGACGGCTC +
Preference number: 4 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLCDRVP*TVLGRL
Trigger: GAGCCGTCCCAGGACTGTGCAGGGGACTCTGTCACA...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp GTTAGACAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCTGACCAGGGGGCCTaGCCAGAGGGGAGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: VRQQAHRRCKIHQRLEGFSDQGA*PEGSLA
Trigger: AGCAAGGCTCCCCTCTGGGCAGGCCCCCTGGTCAGA...GAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTGTCTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR GCA 90 bp TGGGGATCCTCCTCCCCTGATTTGCTCCGGGAAGCACATTCATCAAGGTCCACAGGTGAGTGCCCCTGCTaGCGCGGCCTGATAATAGGG +
Preference number: 4 (lower is better)
Translates to: WGSSSPDLLREAHSSRSTGECPC*RGLIIG
Trigger: CCCTATTATCAGGCCGCGGCAGCAGGGGCACTCACC...TGTGGACCTTGATGAATGTGCTTCCCGGAGCAAATCAGGGGAGGAGGATCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR GCA 90 bp CCAGCCCATCTCCATGCCAAACCCACTGACGTAGCCCAACAAGCCGCTGCGGTAATACTGGTGAAGGCTTaGCAGGGGAAGTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PAHLHAKPTDVAQQAAAVILVKA*QGKLPS
Trigger: GCTGGGCAACTTCCCCTGGCAAGCCTTCACCAGTAT...TACCGCAGCGGCTTGTTGGGCTACGTCAGTGGGTTTGGCATGGAGATGGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGTGGGGCCCAGGGGGATaGTGTGCTGCAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SCISLLSGWGYKCASLHLWGPGG*CAAAPG
Trigger: TCCTGGAGCTGCAGCACAGCATCCCCCTGGGCCCCA...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp GGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGCTGTGTGGCCCAAGAACACATGGGGCCCAGGGGGATaGTGTGCTGCAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GWFPSFSISSMAVWPKNTWGPGG*CAAAPG
Trigger: TCCTGGAGCTGCAGCACAGCATCCCCCTGGGCCCCA...TGTGTTCTTGGGCCACACAGCCATAGATGAGATGCTGAAACTGGGGAACCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGTTTGGAGCCAGGCGTTaGAGGCCTCCCTGGGAGCTA +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLFGARR*RPPWEL
Trigger: TAGCTCCCAGGGAGGCCTGCAACGCCTGGCTCCAAA...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGCTTCGCCACACCCTATaGCCCAGGACACAATGCCCG +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLLRHTL*PRTQCP
Trigger: CGGGCATTGTGTCCTGGGGCATAGGGTGTGGCGAAG...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAAGGGATGGGGCGGGCTTaGCGGGTGGGGGTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWEGMGRA*RVGVSL
Trigger: AAGAGAAACCCCCACCCGGCAAGCCCGCCCCATCCC...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp AATGGAGCCTCCTGCCCTGCAGAACAGGGCCGGCACCAGGAGGTACAAGAGCCACAGGCACACAGAAGGTaGAAGATCCACCAACGCTTG +
Preference number: 4 (lower is better)
Translates to: NGASCPAEQGRHQEVQEPQAHRR*KIHQRL
Trigger: CAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTG...TGGCTCTTGTACCTCCTGGTGCCGGCCCTGTTCTGCAGGGCAGGAGGCTCCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR GCA 90 bp AATGCCCGTGGCCACCCAGTGATGGGCATGATTGTCCCATACCACATAGACGCTCCAGGTCCCTGGGGTTaGACAGGTGAGTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: NARGHPVMGMIVPYHIDAPGPWG*TGECPC
Trigger: ACAGGGGCACTCACCTGTGCAACCCCAGGGACCTGG...AGCGTCTATGTGGTATGGGACAATCATGCCCATCACTGGGTGGCCACGGGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp CAGCTACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATCGCCTGGACAGCCTTTaGAGTGAGGGCTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: QLRLSLNRVACQQGQGWDRLDSL*SEGFSR
Trigger: TCTGGAGAAGCCCTCACTCCAAAGGCTGTCCAGGCG...ATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CCA 90 bp CAGCTACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATCCACCACATTGCGCCTaGACAGCCTTTGGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: QLRLSLNRVACQQGQGWDPPHCA*TAFGVR
Trigger: CCTCACTCCAAAGGCTGTCCAGGCGCAATGTGGTGG...ATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CCA 90 bp ACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGCTGTGTGGTCCCCTGCACAGTCCTaGGACGGCTCCAGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: TRWTGWFPSFSISSMAVWSPAQS*DGSRSK
Trigger: CTTCGACCTGGAGCCGTCCCAGGACTGTGCAGGGGA...CCACACAGCCATAGATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp CTCCATGCCAAACCCACTGACGTAGCCCAACAAGCCGCTGCGGTAGAGGGTCTCACACGGTGGACAGGGTaGTTCCCCAGTTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: LHAKPTDVAQQAAAVEGLTRWTG*FPSFSI
Trigger: GATGCTGAAACTGGGGAACCACCCTGTCCACCGTGT...GAGACCCTCTACCGCAGCGGCTTGTTGGGCTACGTCAGTGGGTTTGGCATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR TCA 90 bp CTCCTGGCAGTGGTTCTGGACCTTGGCAGGGTTGTCTCCAGGTGCGTTGATGGCATCCGAACCGACGAATaGGATTGTGACAGAGTCCCC +
Preference number: 4 (lower is better)
Translates to: LLAVVLDLGRVVSRCVDGIRTDE*DCDRVP
Trigger: GGGGACTCTGTCACAATCTCATTCGTCGGTTCGGAT...GCCATCAACGCACCTGGAGACAACCCTGCCAAGGTCCAGAACCACTGCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR TCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCAGAGGGGAGCCTTGCTaGCCACAGAACTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLRGEPC*PQNWLG
Trigger: TCCAAGCCAGTTCTGTGGTCAGCAAGGCTCCCCTCT...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp CACCCAGTGATGGGCATGATTGTCCCATACCACATAGACGCTGCCACTGTCCCCAGAGGGGAGCCTTGCTaGCCACAGAACTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: HPVMGMIVPYHIDAATVPRGEPC*PQNWLG
Trigger: TCCAAGCCAGTTCTGTGGTCAGCAAGGCTCCCCTCT...GGGGACAGTGGCAGCGTCTATGTGGTATGGGACAATCATGCCCATCACTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR TCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGAGAGGGGAGCCTTGCTaGCCACAGAACTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLRGEPC*PQNWLG
Trigger: TCCAAGCCAGTTCTGTGGTCAGCAAGGCTCCCCTCT...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp TCTGCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCAGCGATACAAACTCCCTCTaGCCAGGGGGCCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SANTGPVNLHGNNRWGLSDTNSL*PGGLPR
Trigger: TCTGGGCAGGCCCCCTGGTCAGAGGGAGTTTGTATC...GCTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR TCA 90 bp CAGCTACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATCCGCAAACTCCTCCCTaGGGATACAAACTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: QLRLSLNRVACQQGQGWDPQTPP*GYKLPL
Trigger: CAGAGGGAGTTTGTATCCTCAGGGAGGAGTTTGCGG...ATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR TCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGCCCTGCTGGCCTCGCTaGTGGGCTGACTATAGTTCA +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLPCWPR*WADYSS
Trigger: TGAACTATAGTCAGCCCATCAGCGAGGCCAGCAGGG...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp CACAACGACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGCCCATGCCAAACCCACTaGCGTAGCCCAACAAGCCGC +
Preference number: 4 (lower is better)
Translates to: HNDTVDRVVPQFQHLIYGPCQTH*RSPTSR
Trigger: GCGGCTTGTTGGGCTACGTCAGTGGGTTTGGCATGG...GCCATAGATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGTCGTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR TCA 90 bp GCCCAGTGGAGAACCCAGTTGCCCACAGAACCTCCCCAGGCTTTTCTTATCAGCCAGCCAGGCATACACTaGAGAACCTCCTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: AQWRTQLPTEPPQAFLISQPGIH*RTSSPS
Trigger: GGATGGGGAGGAGGTTCTTCAGTGTATGCCTGGCTG...GCTGATAAGAAAAGCCTGGGGAGGTTCTGTGGGCAACTGGGTTCTCCACTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR TCA 90 bp CAGAACAGGGCCGGCACCAGGAGGTACAAGAGCCACATTTCTCAAGGCCCGTGTCCTGTGTGTCAGAGCTaGGGACTGAACCTAACGGAG +
Preference number: 4 (lower is better)
Translates to: QNRAGTRRYKSHISQGPCPVCQS*GLNLTE
Trigger: CTCCGTTAGGTTCAGTCCTCAGCTCTGACACACAGG...ACACGGGCCTTGAGAAATGTGGCTCTTGTACCTCCTGGTGCCGGCCCTGTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR TCA 90 bp GGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGCAGGCCCCTGTGTGTCAGAGCTaGGGACTGAACCTAACGGAG +
Preference number: 4 (lower is better)
Translates to: GTQKVQDPPTLGGFLQQAPVCQS*GLNLTE
Trigger: CTCCGTTAGGTTCAGTCCTCAGCTCTGACACACAGG...GGCCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539803.5
ENST00000545280.5
ENST00000671738.1
ENST00000672949.1
CDS-3UTR TCA 90 bp CGGCCTGATAATAGGGCTCCTGGCAGTGGTTCTGGACCTTGGCAGGGTTGTCTCGTTCCAGGCATACACTaGAGAACCTCCTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: RPDNRAPGSGSGPWQGCLVPGIH*RTSSPS
Trigger: GGATGGGGAGGAGGTTCTTCAGTGTATGCCTGGAAC...GAGACAACCCTGCCAAGGTCCAGAACCACTGCCAGGAGCCCTATTATCAGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673569.1
CDS-3UTR GCA 90 bp CAGCTACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATAAGCAGCCACCACATTaGGCCTGGACAGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: QLRLSLNRVACQQGQGWDKQPPH*AWTAFG
Trigger: TCCAAAGGCTGTCCAGGCGCAATGTGGTGGCTGCTT...ATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR GCA 90 bp CAGCTACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATTGCTCTCTTGGCCTTTaGCATACGGCTCTGGGTACC +
Preference number: 4 (lower is better)
Translates to: QLRLSLNRVACQQGQGWDCSLGL*HTALGT
Trigger: GGTACCCAGAGCCGTATGGCAAAGGCCAAGAGAGCA...ATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR GCA 90 bp TCTGCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCAGCCCGAGGAAGGCTGTGTaGGGAAGGTCAGCCGCAAAC +
Preference number: 4 (lower is better)
Translates to: SANTGPVNLHGNNRWGLSPRKAV*GRSAAN
Trigger: GTTTGCGGCTGACCTTCCGCACACAGCCTTCCTCGG...GCTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR GCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGAGGGTTGTCTCCAGGTaGGTTGATGGCCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLRVVSR*VDGLRA
Trigger: GGCTCTGAGGCCATCAACGCACCTGGAGACAACCCT...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp CACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGCAGGCCTGAGGGTTGTCTCCAGGTaGGTTGATGGCCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: HTEGARSTNAWRVSPAGLRVVSR*VDGLRA
Trigger: GGCTCTGAGGCCATCAACGCACCTGGAGACAACCCT...CAGGCCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR GCA 90 bp CACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGCAGGCCTGTGAGGGTTGTCTCCAGGTaGGTTGATGGCCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: HRRCKIHQRLEGFSSRPVRVVSR*VDGLRA
Trigger: GGCTCTGAGGCCATCAACGCACCTGGAGACAACCCT...CACAGGCCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR GCA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAAGGTGAGTGCCCCTGCTaGCGCGGCCTGATAATAGGG +
Preference number: 4 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWEGECPC*RGLIIG
Trigger: CCCTATTATCAGGCCGCGGCAGCAGGGGCACTCACC...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp TTAGACAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGGTCCCTGGGGTTaGACAGGTGAGTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LDSRHTEGARSTNAWRVSPGPWG*TGECPC
Trigger: GCAGGGGCACTCACCTGTGCAACCCCAGGGACCTGG...AGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTGTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR GCA 90 bp CCAGCCCATCTCCATGCCAAACCCACTGACGTAGCCCAACAAGCCGCTGCGGTAAGCCCAACAAGCCGCTaGGGTAGAGGGTCTCATTAT +
Preference number: 4 (lower is better)
Translates to: PAHLHAKPTDVAQQAAAVSPTSR*GRGSHY
Trigger: ATAATGAGACCCTCTACCGCAGCGGCTTGTTGGGCT...TACCGCAGCGGCTTGTTGGGCTACGTCAGTGGGTTTGGCATGGAGATGGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCCCCTGGCAGACACTGTaGCTTTGCGTCTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLPWQTL*LCVSSP
Trigger: TGGGGATGAGACGCAAAGGCACAGTGTCTGCCAGGG...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp CACCCAGTGATGGGCATGATTGTCCCATACCACATAGACGCTGCCACTGTCCCCCCCTGGCAGACACTGTaGCTTTGCGTCTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: HPVMGMIVPYHIDAATVPPWQTL*LCVSSP
Trigger: TGGGGATGAGACGCAAAGGCACAGTGTCTGCCAGGG...GGGGACAGTGGCAGCGTCTATGTGGTATGGGACAATCATGCCCATCACTGGGTG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCGTCCGCAGGCTGGAGTaGAGTGGCGTGATCTTAGCT +
Preference number: 4 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLVRRLE*SGVILA
Trigger: AGCTAAGATCACGCCACTGCACTCCAGCCTGCGGAC...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp GACAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCACCGACAGCGTCTTCGTaGACTGTGTGCAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: DSRHTEGARSTNAWRVSPPTASS*TVCRGS
Trigger: GCTCCCTCTGCACACAGTGCACGAAGACGCTGTCGG...TGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR GCA 90 bp GCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGCAGAGTGGAGAACCCAGTTaGCCACAGAACCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: AGTQKVQDPPTLGGFLQQSGEPS*PQNLPR
Trigger: CCTGGGGAGGTTCTGTGGGCAACTGGGTTCTCCACT...CTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR CCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGCTGGGTCCAGGCATCTaGAACTGGACATCTGGGACC +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLLGPGI*NWTSGT
Trigger: GGTCCCAGATGTCCAGTTCCAGATGCCTGGACCCAG...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CTCCATGCCAAACCCACTGACGTAGCCCAACAAGCCGCTGCGGTAGAGGGTCTCATTTCCCCCACACTCTaGGTCCAGGCATCTGGAACT +
Preference number: 4 (lower is better)
Translates to: LHAKPTDVAQQAAAVEGLISPTL*VQASGT
Trigger: AGTTCCAGATGCCTGGACCCAGAGTGTGGGGGAAAT...GAGACCCTCTACCGCAGCGGCTTGTTGGGCTACGTCAGTGGGTTTGGCATGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGCGCCTGGACAGCCTTTaGAGTGAGGGCTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLRLDSL*SEGFSR
Trigger: TCTGGAGAAGCCCTCACTCCAAAGGCTGTCCAGGCG...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGCCACCACATTGCGCCTaGACAGCCTTTGGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLPPHCA*TAFGVR
Trigger: CCTCACTCCAAAGGCTGTCCAGGCGCAATGTGGTGG...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp TCTGCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCAGCGGGGATGTCAGCTGCTaGGGTAGCTCTTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: SANTGPVNLHGNNRWGLSGDVSC*GSSWAK
Trigger: CTTGGCCCAAGAGCTACCCCAGCAGCTGACATCCCC...GCTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CCA 90 bp GCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCAGCTACGGGGATGTCAGCTGCTaGGGTAGCTCTTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: ANTGPVNLHGNNRWGLSYGDVSC*GSSWAK
Trigger: CTTGGCCCAAGAGCTACCCCAGCAGCTGACATCCCC...GTAGCTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGTTTGCCATACGGCTCTaGGTACCCGGGGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLFAIRL*VPGGCQ
Trigger: CTGACATCCCCCGGGTACCCAGAGCCGTATGGCAAA...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CTACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATCCATCCGTGCTGCTCTCTTaGCCTTTGCCATACGGCTCT +
Preference number: 4 (lower is better)
Translates to: LRLSLNRVACQQGQGWDPSVLLS*PLPYGS
Trigger: AGAGCCGTATGGCAAAGGCCAAGAGAGCAGCACGGA...TGGATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CCA 90 bp TACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATCCAGCACAGCAAAGCCCTCTaGAGCCTTGATGTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: YGCLLIGLLASRGRAGIQHSKAL*SLDVRA
Trigger: AGCACGGACATCAAGGCTCCAGAGGGCTTTGCTGTG...CTGGATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CCA 90 bp CTACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATCCACACAGCAAAGCCCTCTaGAGCCTTGATGTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: LRLSLNRVACQQGQGWDPHSKAL*SLDVRA
Trigger: AGCACGGACATCAAGGCTCCAGAGGGCTTTGCTGTG...TGGATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CCA 90 bp CGGGGTGCACAACGACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATAGTGGTTCTGGACCTTaGCAGGGTTGTCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: RGAQRHGGQGGSPVSASHSGSGP*QGCLQV
Trigger: CACCTGGAGACAACCCTGCCAAGGTCCAGAACCACT...ATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGTCGTTGTGCACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp CAGTGGTTCTGGACCTTGGCAGGGTTGTCTCCAGGTGCGTTGATGGCCTCAGAGAGTGGTTCTGGACCTTaGCAGGGTTGTCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: QWFWTLAGLSPGALMASESGSGP*QGCLQV
Trigger: CACCTGGAGACAACCCTGCCAAGGTCCAGAACCACT...CTCTGAGGCCATCAACGCACCTGGAGACAACCCTGCCAAGGTCCAGAACCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR CCA 90 bp CGGGGTGCACAACGACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATTCCTGGCAGTGGTTCTaGACCTTGGCAGGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: RGAQRHGGQGGSPVSASHSWQWF*TLAGLS
Trigger: AGACAACCCTGCCAAGGTCCAGAACCACTGCCAGGA...ATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGTCGTTGTGCACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp GGAGCTACAGGCAGCCTCGAGTACTTCAGCTCAGTAGTTAGCCAGCCCATCTCCTGCCCAGCTTGGCTCTaGAAGAACCGAGGGTCGTCT +
Preference number: 4 (lower is better)
Translates to: GATGSLEYFSSVVSQPISCPAWL*KNRGSS
Trigger: AGACGACCCTCGGTTCTTCCAGAGCCAAGCTGGGCA...GGAGATGGGCTGGCTAACTACTGAGCTGAAGTACTCGAGGCTGCCTGTAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGGGAAGTTGCCCAGCTTaGCTCTGGAAGAACCGAGGG +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLGSCPA*LWKNRG
Trigger: CCCTCGGTTCTTCCAGAGCCAAGCTGGGCAACTTCC...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CAAGCCGCTGCGGTAGAGGGTCTCATTATCGGGCAGACAGACCGGGAGGACGTTGAGAAACACTGTCCTTaGGGTAGATGGTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: QAAAVEGLIIGQTDREDVEKHCP*GRWCGQ
Trigger: CTGCCCACACCATCTACCCCAAGGACAGTGTTTCTC...AACGTCCTCCCGGTCTGTCTGCCCGATAATGAGACCCTCTACCGCAGCGGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTTCATCTATGGCTGTGTaGCCCAAGAACACATTCACA +
Preference number: 4 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVSSMAV*PKNTFT
Trigger: TGTGAATGTGTTCTTGGGCCACACAGCCATAGATGA...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCGGTCTCTGTCTCTTTTaGAGCCAGGCGTTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLGLCLF*SQALQA
Trigger: GGCCTGCAACGCCTGGCTCCAAAAGAGACAGAGACC...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTaGTGCAACAGTGATGTGAAT +
Preference number: 4 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVSLAVA*CNSDVN
Trigger: ATTCACATCACTGTTGCACCAAGCCACTGCAAGAGA...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGCCATGTTGGCCAGGATaGGCTGGATCTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLPCWPG*AGSPDL
Trigger: GAGGTCAGGAGATCCAGCCCATCCTGGCCAACATGG...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp CGGGGTGCACAACGACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATCGACGAATGAGATTGTaGCAGAGTCCCCTGCACAGT +
Preference number: 4 (lower is better)
Translates to: RGAQRHGGQGGSPVSASHRRMRL*QSPLHS
Trigger: ACTGTGCAGGGGACTCTGTCACAATCTCATTCGTCG...ATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGTCGTTGTGCACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR TCA 90 bp TACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATCCAGCGACGAATGAGATTGTaGCAGAGTCCCCTGCACAGT +
Preference number: 4 (lower is better)
Translates to: YGCLLIGLLASRGRAGIQRRMRL*QSPLHS
Trigger: ACTGTGCAGGGGACTCTGTCACAATCTCATTCGTCG...CTGGATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR TCA 90 bp CTACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATCCACGACGAATGAGATTGTaGCAGAGTCCCCTGCACAGT +
Preference number: 4 (lower is better)
Translates to: LRLSLNRVACQQGQGWDPRRMRL*QSPLHS
Trigger: ACTGTGCAGGGGACTCTGTCACAATCTCATTCGTCG...TGGATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR TCA 90 bp CAGCTACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATATCCGAACCGACGAATaGGATTGTGACAGAGTCCCC +
Preference number: 4 (lower is better)
Translates to: QLRLSLNRVACQQGQGWDIRTDE*DCDRVP
Trigger: GGGGACTCTGTCACAATCTCATTCGTCGGTTCGGAT...ATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR TCA 90 bp ACAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGAGAGGGGAGCCTTGCTaGCCACAGAACTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: TAGTQKVQDPPTLGGFLQRGEPC*PQNWLG
Trigger: TCCAAGCCAGTTCTGTGGTCAGCAAGGCTCCCCTCT...CTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR TCA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAAGATACAAACTCCCTCTaGCCAGGGGGCCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWEDTNSL*PGGLPR
Trigger: TCTGGGCAGGCCCCCTGGTCAGAGGGAGTTTGTATC...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGCCGCAAACTCCTCCCTaGGGATACAAACTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLPQTPP*GYKLPL
Trigger: CAGAGGGAGTTTGTATCCTCAGGGAGGAGTTTGCGG...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp AGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGCAGGCCGGAGGGCTGGTCTGTaGTGGGATCAGCATATGATC +
Preference number: 4 (lower is better)
Translates to: RHTEGARSTNAWRVSPAGRRAGL*WDQHMI
Trigger: GATCATATGCTGATCCCATCACAGACCAGCCCTCCG...GCCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539803.5
ENST00000545280.5
ENST00000671738.1
ENST00000672949.1
CDS-3UTR TCA 90 bp CACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGCAGGCCTGTGCGGAGGGCTGGTCTGTaGTGGGATCAGCATATGATC +
Preference number: 4 (lower is better)
Translates to: HRRCKIHQRLEGFSSRPVRRAGL*WDQHMI
Trigger: GATCATATGCTGATCCCATCACAGACCAGCCCTCCG...CACAGGCCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539803.5
ENST00000545280.5
ENST00000671738.1
ENST00000672949.1
CDS-3UTR TCA 90 bp CACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGCAGGCCTGTGCCTGTGTGTCAGAGCTaGGGACTGAACCTAACGGAG +
Preference number: 4 (lower is better)
Translates to: HRRCKIHQRLEGFSSRPVPVCQS*GLNLTE
Trigger: CTCCGTTAGGTTCAGTCCTCAGCTCTGACACACAGG...CACAGGCCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539803.5
ENST00000545280.5
ENST00000671738.1
ENST00000672949.1
CDS-3UTR TCA 90 bp TTCTGGACCTTGGCAGGGTTGTCTCCAGGTGCGTTGATGGCCTCAGAGCCCCTGCTCATGTATTGCCGGTaGGATGTAACTTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: FWTLAGLSPGALMASEPLLMYCR*DVTWCC
Trigger: GCAGCACCAAGTTACATCTCACCGGCAATACATGAG...CAGGGGCTCTGAGGCCATCAACGCACCTGGAGACAACCCTGCCAAGGTCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR TCA 90 bp CTCCTGGCAGTGGTTCTGGACCTTGGCAGGGTTGTCTCCAGGTGCGTTGATGGCCAAAAATGGTGGGCTTaGACCCTCATGTATTGCCGG +
Preference number: 4 (lower is better)
Translates to: LLAVVLDLGRVVSRCVDGQKWWA*TLMYCR
Trigger: CCGGCAATACATGAGGGTTCAAGCCCACCATTTTTG...GCCATCAACGCACCTGGAGACAACCCTGCCAAGGTCCAGAACCACTGCCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR TCA 90 bp TCAGTAGTTAGACAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGCCCTGCTGGCCTCGCTaGTGGGCTGAAAACTCCCTC +
Preference number: 4 (lower is better)
Translates to: SVVRQQAHRRCKIHQRLEPCWPR*WAENSL
Trigger: GAGGGAGTTTTCAGCCCATCAGCGAGGCCAGCAGGG...CTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTGTCTAACTACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR TCA 90 bp CATCAGGCAGTGACCACATCATCAGTAGTTAGACAGCAGGCACACAGAAGGTGCCCCTGCTGGCCTCGCTaGTGGGCTGAAAACTCCCTC +
Preference number: 4 (lower is better)
Translates to: HQAVTTSSVVRQQAHRRCPCWPR*WAENSL
Trigger: GAGGGAGTTTTCAGCCCATCAGCGAGGCCAGCAGGG...GCACCTTCTGTGTGCCTGCTGTCTAACTACTGATGATGTGGTCACTGCCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR TCA 90 bp AGACAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCGATGGGATCAGCATATaGTCCACAGCCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: RQQAHRRCKIHQRLEGFSDGISI*STACCR
Trigger: GCGGCAGCAGGCTGTGGATCATATGCTGATCCCATC...GGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR GCA 90 bp GGAGCTACAGGCAGCCTCGAGTACTTCAGCTCAGTAGTTAGCCAGCCCATCTCCAAGCAGCCACCACATTaGGCCTGGACAGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: GATGSLEYFSSVVSQPISKQPPH*AWTAFG
Trigger: TCCAAAGGCTGTCCAGGCGCAATGTGGTGGCTGCTT...GGAGATGGGCTGGCTAACTACTGAGCTGAAGTACTCGAGGCTGCCTGTAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp ATCTGCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCAGTGTGACAGAGTCCCCTaGACAGTCCTGGGACGGCTC +
Preference number: 4 (lower is better)
Translates to: ICKHWACKSAWKQPLGAQCDRVP*TVLGRL
Trigger: GAGCCGTCCCAGGACTGTGCAGGGGACTCTGTCACA...CTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR GCA 90 bp ATCTGCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCAGCCGAGGAAGGCTGTGTaGGGAAGGTCAGCCGCAAAC +
Preference number: 4 (lower is better)
Translates to: ICKHWACKSAWKQPLGAQPRKAV*GRSAAN
Trigger: GTTTGCGGCTGACCTTCCGCACACAGCCTTCCTCGG...CTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR GCA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCGAGGAAGGCTGTGTaGGGAAGGTCAGCCGCAAAC +
Preference number: 4 (lower is better)
Translates to: SCISLLSGWGYKCASLHLPRKAV*GRSAAN
Trigger: GTTTGCGGCTGACCTTCCGCACACAGCCTTCCTCGG...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp GACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGCTGTGTGAGGGTTGTCTCCAGGTaGGTTGATGGCCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: DTVDRVVPQFQHLIYGCVRVVSR*VDGLRA
Trigger: GGCTCTGAGGCCATCAACGCACCTGGAGACAACCCT...CACACAGCCATAGATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCATACTGGTGAAGGCTTaGCAGGGGAAGTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLILVKA*QGKLPS
Trigger: GCTGGGCAACTTCCCCTGGCAAGCCTTCACCAGTAT...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp CACCCAGTGATGGGCATGATTGTCCCATACCACATAGACGCTGCCACTGTCCCCATACTGGTGAAGGCTTaGCAGGGGAAGTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: HPVMGMIVPYHIDAATVPILVKA*QGKLPS
Trigger: GCTGGGCAACTTCCCCTGGCAAGCCTTCACCAGTAT...GGGGACAGTGGCAGCGTCTATGTGGTATGGGACAATCATGCCCATCACTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAATTTGGAGCCAGGCGTTaGAGGCCTCCCTGGGAGCTA +
Preference number: 4 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWEFGARR*RPPWEL
Trigger: TAGCTCCCAGGGAGGCCTGCAACGCCTGGCTCCAAA...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp GGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGCTGTGTGGCCCAAGAACACATTTGGAGCCAGGCGTTaGAGGCCTCCCTGGGAGCTA +
Preference number: 4 (lower is better)
Translates to: GWFPSFSISSMAVWPKNTFGARR*RPPWEL
Trigger: TAGCTCCCAGGGAGGCCTGCAACGCCTGGCTCCAAA...TGTGTTCTTGGGCCACACAGCCATAGATGAGATGCTGAAACTGGGGAACCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp CACCCAGTGATGGGCATGATTGTCCCATACCACATAGACGCTGCCACTGTCCCCATACCACATAGACGCTaGCACTGTCCCCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: HPVMGMIVPYHIDAATVPIPHRR*HCPPGR
Trigger: TCTGCCAGGGGGACAGTGGCAGCGTCTATGTGGTAT...GGGGACAGTGGCAGCGTCTATGTGGTATGGGACAATCATGCCCATCACTGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAACTTCGCCACACCCTATaGCCCAGGACACAATGCCCG +
Preference number: 4 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWELRHTL*PRTQCP
Trigger: CGGGCATTGTGTCCTGGGGCATAGGGTGTGGCGAAG...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGGTGATCTTAGCTCACTaGAACCTCCGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLVILAH*NLRLPG
Trigger: ACCTGGGAGGCGGAGGTTGCAGTGAGCTAAGATCAC...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp AGCGGTCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGATAAGTGTGCATCATTaGACCTGCCTTTTGGGAATA +
Preference number: 4 (lower is better)
Translates to: SGLWDSASCLGWGGLAGWISVHH*TCLLGI
Trigger: TATTCCCAAAAGGCAGGTGCAATGATGCACACTTAT...CCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGACCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp GGTTGCCCAGTGGAGAACCCAGTTGCCCACAGAACCTCCCCAGGCTTTTCTTATAGTGGAGAACCCAGTTaGCCACAGAACCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GCPVENPVAHRTSPGFSYSGEPS*PQNLPR
Trigger: CCTGGGGAGGTTCTGTGGGCAACTGGGTTCTCCACT...ATAAGAAAAGCCTGGGGAGGTTCTGTGGGCAACTGGGTTCTCCACTGGGCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR CCA 90 bp ACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGCTGTGTGGCTGGGTCCAGGCATCTaGAACTGGACATCTGGGACC +
Preference number: 4 (lower is better)
Translates to: TRWTGWFPSFSISSMAVWLGPGI*NWTSGT
Trigger: GGTCCCAGATGTCCAGTTCCAGATGCCTGGACCCAG...CCACACAGCCATAGATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp CACAACGACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGCCGCCTGGACAGCCTTTaGAGTGAGGGCTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: HNDTVDRVVPQFQHLIYGRLDSL*SEGFSR
Trigger: TCTGGAGAAGCCCTCACTCCAAAGGCTGTCCAGGCG...GCCATAGATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGTCGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp ACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGCTGTGTGGCGCCTGGACAGCCTTTaGAGTGAGGGCTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: TRWTGWFPSFSISSMAVWRLDSL*SEGFSR
Trigger: TCTGGAGAAGCCCTCACTCCAAAGGCTGTCCAGGCG...CCACACAGCCATAGATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp GACAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCACGCCTGGACAGCCTTTaGAGTGAGGGCTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: DSRHTEGARSTNAWRVSPRLDSL*SEGFSR
Trigger: TCTGGAGAAGCCCTCACTCCAAAGGCTGTCCAGGCG...TGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR CCA 90 bp GGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGCTGTGTGGCCCAAGAACACAGGGGATGTCAGCTGCTaGGGTAGCTCTTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GWFPSFSISSMAVWPKNTGDVSC*GSSWAK
Trigger: CTTGGCCCAAGAGCTACCCCAGCAGCTGACATCCCC...TGTGTTCTTGGGCCACACAGCCATAGATGAGATGCTGAAACTGGGGAACCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp GCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCAGCTACTTTGCCATACGGCTCTaGGTACCCGGGGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: ANTGPVNLHGNNRWGLSYFAIRL*VPGGCQ
Trigger: CTGACATCCCCCGGGTACCCAGAGCCGTATGGCAAA...GTAGCTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CCA 90 bp ACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGCTGTGTGGTTTGCCATACGGCTCTaGGTACCCGGGGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: TRWTGWFPSFSISSMAVWFAIRL*VPGGCQ
Trigger: CTGACATCCCCCGGGTACCCAGAGCCGTATGGCAAA...CCACACAGCCATAGATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp TCTGCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCAGCTTTGCCATACGGCTCTaGGTACCCGGGGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: SANTGPVNLHGNNRWGLSFAIRL*VPGGCQ
Trigger: CTGACATCCCCCGGGTACCCAGAGCCGTATGGCAAA...GCTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGCACAGCAAAGCCCTCTaGAGCCTTGATGTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLHSKAL*SLDVRA
Trigger: AGCACGGACATCAAGGCTCCAGAGGGCTTTGCTGTG...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp ATGATCTGCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTTCCCCTGCACAGTCCTaGGACGGCTCCAGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: MICKHWACKSAWKQPLGASPAQS*DGSRSK
Trigger: CTTCGACCTGGAGCCGTCCCAGGACTGTGCAGGGGA...AGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGATCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CCA 90 bp CCTGATAATAGGGCTCCTGGCAGTGGTTCTGGACCTTGGCAGGGTTGTCTCCAGAGTGGTTCTGGACCTTaGCAGGGTTGTCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PDNRAPGSGSGPWQGCLQSGSGP*QGCLQV
Trigger: CACCTGGAGACAACCCTGCCAAGGTCCAGAACCACT...CTGGAGACAACCCTGCCAAGGTCCAGAACCACTGCCAGGAGCCCTATTATCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR CCA 90 bp CGCTGCGGTAGAGGGTCTCATTATCGGGCAGACAGACCGGGAGGACGTTGGGGCTCATCTATGGCTGTGTaGCCCAAGAACACATTCACA +
Preference number: 4 (lower is better)
Translates to: RCGRGSHYRADRPGGRWGSSMAV*PKNTFT
Trigger: TGTGAATGTGTTCTTGGGCCACACAGCCATAGATGA...GCCCCAACGTCCTCCCGGTCTGTCTGCCCGATAATGAGACCCTCTACCGCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp AATGCCCGTGGCCACCCAGTGATGGGCATGATTGTCCCATACCACATAGACGCTGGTCTCTGTCTCTTTTaGAGCCAGGCGTTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: NARGHPVMGMIVPYHIDAGLCLF*SQALQA
Trigger: GGCCTGCAACGCCTGGCTCCAAAAGAGACAGAGACC...AGCGTCTATGTGGTATGGGACAATCATGCCCATCACTGGGTGGCCACGGGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCACTTCAGTCCAGTGCTaGGCTCACCTGGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLTSVQC*AHLASA
Trigger: TGCAGAAGCCAGGTGAGCCCAGCACTGGACTGAAGT...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGCAGGCCTGTGAGATCCACCAACGCTTaGAGGGTTTCTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: HRRCKIHQRLEGFSSRPVRSTNA*RVSPAG
Trigger: GCCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCT...CACAGGCCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539803.5
ENST00000545280.5
ENST00000671738.1
ENST00000672949.1
CDS-3UTR CCA 90 bp CTACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATCCAGCCTGTAAATCTGCATaGAAACAACCGCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LRLSLNRVACQQGQGWDPACKSA*KQPLGA
Trigger: AGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGC...TGGATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CCA 90 bp TACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATCCAGGCCTGTAAATCTGCATaGAAACAACCGCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: YGCLLIGLLASRGRAGIQACKSA*KQPLGA
Trigger: AGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGC...CTGGATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CCA 90 bp GGAGCTACAGGCAGCCTCGAGTACTTCAGCTCAGTAGTTAGCCAGCCCATCTCCCTGGAACTGGACATCTaGGACCTGCGAGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: GATGSLEYFSSVVSQPISLELDI*DLRENW
Trigger: CCAGTTCTCTCGCAGGTCCCAGATGTCCAGTTCCAG...GGAGATGGGCTGGCTAACTACTGAGCTGAAGTACTCGAGGCTGCCTGTAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
3UTR CAA 72 bp CAGGAGGTACAAGAGCCACATTTCTCAAGGCCCGTGTaGAATCCTGGGCTCTCCCGACAGCGTCTTCGTGCA +
Preference number: 4 (lower is better)
Translates to: QEVQEPHFSRPV*NPGLSRQRLRA
Trigger: TGCACGAAGACGCTGTCGGGAGAGCCCAGGATTCAACACGGGCCTTGAGAAATGTGGCTCTTGTACCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR TCA 90 bp GGAGCTACAGGCAGCCTCGAGTACTTCAGCTCAGTAGTTAGCCAGCCCATCTCCGGACAGCCTTTGGAGTaGGGGCTTCTCCAGAGATAT +
Preference number: 4 (lower is better)
Translates to: GATGSLEYFSSVVSQPISGQPLE*GLLQRY
Trigger: ATATCTCTGGAGAAGCCCTCACTCCAAAGGCTGTCC...GGAGATGGGCTGGCTAACTACTGAGCTGAAGTACTCGAGGCTGCCTGTAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR TCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCCGACGAATGAGATTGTaGCAGAGTCCCCTGCACAGT +
Preference number: 4 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLRRMRL*QSPLHS
Trigger: ACTGTGCAGGGGACTCTGTCACAATCTCATTCGTCG...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGATCCGAACCGACGAATaGGATTGTGACAGAGTCCCC +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLIRTDE*DCDRVP
Trigger: GGGGACTCTGTCACAATCTCATTCGTCGGTTCGGAT...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp GGAGCTACAGGCAGCCTCGAGTACTTCAGCTCAGTAGTTAGCCAGCCCATCTCCATCCGAACCGACGAATaGGATTGTGACAGAGTCCCC +
Preference number: 4 (lower is better)
Translates to: GATGSLEYFSSVVSQPISIRTDE*DCDRVP
Trigger: GGGGACTCTGTCACAATCTCATTCGTCGGTTCGGAT...GGAGATGGGCTGGCTAACTACTGAGCTGAAGTACTCGAGGCTGCCTGTAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR TCA 90 bp CGGGGTGCACAACGACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATCACTCTGGTTCTTCCTaGGAGAAACACTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: RGAQRHGGQGGSPVSASHHSGSS*EKHCPW
Trigger: CCAAGGACAGTGTTTCTCTCAGGAAGAACCAGAGTG...ATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGTCGTTGTGCACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR TCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCCAAGGCGAAAGTTGTTaGGATGTACAGGCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLQGESC*DVQASR
Trigger: CCGGGAAGCCTGTACATCTCAACAACTTTCGCCTTG...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGAGCTGTGTCAACAGATaGAGTAGGGGAAGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLSCVNR*SRGRRF
Trigger: GAACCGCCTTCCCCTACTTCATCTGTTGACACAGCT...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTCCGGGGGATGTCAGCTaGTGGGGTAGCTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: LSGWGYKCASLHLPFGNIPGDVS*WGSSWA
Trigger: GGCCCAAGAGCTACCCCAGCAGCTGACATCCCCCGG...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTTCTGACCAGGGGGCCTaGCCAGAGGGGAGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LSGWGYKCASLHLPFGNISDQGA*PEGSLA
Trigger: AGCAAGGCTCCCCTCTGGGCAGGCCCCCTGGTCAGA...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp GGCAGACACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAATCTGACCAGGGGGCCTaGCCAGAGGGGAGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: GRHCAFASHPQHRTYCQKSDQGA*PEGSLA
Trigger: AGCAAGGCTCCCCTCTGGGCAGGCCCCCTGGTCAGA...TTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGAGGGTTGTCTCCAGGTaGGTTGATGGCCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SCISLLSGWGYKCASLHLRVVSR*VDGLRA
Trigger: GGCTCTGAGGCCATCAACGCACCTGGAGACAACCCT...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTCCAGGTCCCTGGGGTTaGACAGGTGAGTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LSGWGYKCASLHLPFGNIPGPWG*TGECPC
Trigger: GCAGGGGCACTCACCTGTGCAACCCCAGGGACCTGG...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp AAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATTGCCGGTGAGACCAGGTCCCTGGGGTTaGACAGGTGAGTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: KAWISKMVGLNPHVLPVRPGPWG*TGECPC
Trigger: GCAGGGGCACTCACCTGTGCAACCCCAGGGACCTGG...TCTCACCGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR GCA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAACCCTGGCAGACACTGTaGCTTTGCGTCTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWEPWQTL*LCVSSP
Trigger: TGGGGATGAGACGCAAAGGCACAGTGTCTGCCAGGG...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp AATGCCCGTGGCCACCCAGTGATGGGCATGATTGTCCCATACCACATAGACGCTATACCACATAGACGCTaGCACTGTCCCCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: NARGHPVMGMIVPYHIDAIPHRR*HCPPGR
Trigger: TCTGCCAGGGGGACAGTGGCAGCGTCTATGTGGTAT...AGCGTCTATGTGGTATGGGACAATCATGCCCATCACTGGGTGGCCACGGGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTCTCCAGGCCCTCTGTTaGCTGGGGCCTCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: LSGWGYKCASLHLPFGNILQALC*LGPPLC
Trigger: GCACAGTGGAGGCCCCAGGCAACAGAGGGCCTGGAG...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCGAAGAGCACAGTCTCTaGAGTCACACACCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLEEHSL*SHTPAV
Trigger: CACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTC...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCAGAACTTCAGTCCAGTaGTGGGCTCACCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLRTSVQ*WAHLAS
Trigger: AGAAGCCAGGTGAGCCCAGCACTGGACTGAAGTTCT...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp AATGCCCGTGGCCACCCAGTGATGGGCATGATTGTCCCATACCACATAGACGCTGGTTGCACAGGTGAGTaGCCCTGTGGCGTAAATGAG +
Preference number: 4 (lower is better)
Translates to: NARGHPVMGMIVPYHIDAGCTGE*PCGVNE
Trigger: CTCATTTACGCCACAGGGGCACTCACCTGTGCAACC...AGCGTCTATGTGGTATGGGACAATCATGCCCATCACTGGGTGGCCACGGGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp ATCTGCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCAGCTGGGTCCAGGCATCTaGAACTGGACATCTGGGACC +
Preference number: 4 (lower is better)
Translates to: ICKHWACKSAWKQPLGAQLGPGI*NWTSGT
Trigger: GGTCCCAGATGTCCAGTTCCAGATGCCTGGACCCAG...CTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCATTTCCCCCACACTCTaGGTCCAGGCATCTGGAACT +
Preference number: 4 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLISPTL*VQASGT
Trigger: AGTTCCAGATGCCTGGACCCAGAGTGTGGGGGAAAT...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGATTTCCCCCACACTCTaGGTCCAGGCATCTGGAACT +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLISPTL*VQASGT
Trigger: AGTTCCAGATGCCTGGACCCAGAGTGTGGGGGAAAT...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp ATCTGCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCAGCGCCTGGACAGCCTTTaGAGTGAGGGCTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: ICKHWACKSAWKQPLGAQRLDSL*SEGFSR
Trigger: TCTGGAGAAGCCCTCACTCCAAAGGCTGTCCAGGCG...CTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CCA 90 bp ATCTGCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCAGCCACCACATTGCGCCTaGACAGCCTTTGGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: ICKHWACKSAWKQPLGAQPPHCA*TAFGVR
Trigger: CCTCACTCCAAAGGCTGTCCAGGCGCAATGTGGTGG...CTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CCA 90 bp ACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGCTGTGTGGTCCGTGCTGCTCTCTTaGCCTTTGCCATACGGCTCT +
Preference number: 4 (lower is better)
Translates to: TRWTGWFPSFSISSMAVWSVLLS*PLPYGS
Trigger: AGAGCCGTATGGCAAAGGCCAAGAGAGCAGCACGGA...CCACACAGCCATAGATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp GCACAACGACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGTCCGTGCTGCTCTCTTaGCCTTTGCCATACGGCTCT +
Preference number: 4 (lower is better)
Translates to: AQRHGGQGGSPVSASHLWSVLLS*PLPYGS
Trigger: AGAGCCGTATGGCAAAGGCCAAGAGAGCAGCACGGA...CCATAGATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGTCGTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp CCGGTGAGATGTAACTTGGTGCTGCTGCAGGCATACACTGAAGAACCTCCTCCCAAGCCCTTGTGGAGGTaGGCAGTCTTGTTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: PVRCNLVLLQAYTEEPPPKPLWR*AVLFSE
Trigger: CTCGGAGAACAAGACTGCCCACCTCCACAAGGGCTT...GGGAGGAGGTTCTTCAGTGTATGCCTGCAGCAGCACCAAGTTACATCTCACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672500.1
CDS-3UTR CCA 90 bp GACAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAAGTGGTTCTGGACCTTaGCAGGGTTGTCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: DSRHTEGARSTNAWRVSPSGSGP*QGCLQV
Trigger: CACCTGGAGACAACCCTGCCAAGGTCCAGAACCACT...TGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR CCA 90 bp GCACAACGACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGTCCTGGCAGTGGTTCTaGACCTTGGCAGGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: AQRHGGQGGSPVSASHLWSWQWF*TLAGLS
Trigger: AGACAACCCTGCCAAGGTCCAGAACCACTGCCAGGA...CCATAGATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGTCGTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp AGACAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCTCCTGGCAGTGGTTCTaGACCTTGGCAGGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: RQQAHRRCKIHQRLEGFSSWQWF*TLAGLS
Trigger: AGACAACCCTGCCAAGGTCCAGAACCACTGCCAGGA...GGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR CCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGGAGAAACACTGTCCTTaGGGTAGATGGTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLEKHCP*GRWCGQ
Trigger: CTGCCCACACCATCTACCCCAAGGACAGTGTTTCTC...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGTGCACAACGACACGGTaGACAGGGTGGTTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: SCISLLSGWGYKCASLHLCTTTR*TGWFPS
Trigger: ACTGGGGAACCACCCTGTCCACCGTGTCGTTGTGCA...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGGGTCTCTGTCTCTTTTaGAGCCAGGCGTTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SCISLLSGWGYKCASLHLGLCLF*SQALQA
Trigger: GGCCTGCAACGCCTGGCTCCAAAAGAGACAGAGACC...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAAAGGACACAATGCCCGTaGCCACCCAGTGATGGGCAT +
Preference number: 4 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWERTQCP*PPSDGH
Trigger: ATGCCCATCACTGGGTGGCCACGGGCATTGTGTCCT...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGAGGACACAATGCCCGTaGCCACCCAGTGATGGGCAT +
Preference number: 4 (lower is better)
Translates to: SCISLLSGWGYKCASLHLRTQCP*PPSDGH
Trigger: ATGCCCATCACTGGGTGGCCACGGGCATTGTGTCCT...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTGGCGGGCTTGCCGGGTaGGGGTTTCTCTTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LSGWGYKCASLHLPFGNIGGLAG*GFLLQW
Trigger: CCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp GGAAAGTGTGAGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGAGACTCTGCTTCCTGTCTaGGATGGGGCGGGCTTGCCG +
Preference number: 4 (lower is better)
Translates to: GKCELEDTIFAEAGIPRETLLPV*DGAGLP
Trigger: CGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGT...CTCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAAAGGAGGAGCGGTCTGTaGGACTCTGCTTCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWERRSGL*DSASCL
Trigger: CAGACAGGAAGCAGAGTCCCACAGACCGCTCCTCCT...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCAAAATGGTAAGGATGTaGGGGCTGGGAGGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLKMVRM*GLGGKA
Trigger: CGCTTTCCCTCCCAGCCCCCACATCCTTACCATTTT...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGGTTGGTCCTCTCAGGTaGAGCAGTTCCCCTGATGAT +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLVGPLR*SSSPDD
Trigger: ATCATCAGGGGAACTGCTCCACCTGAGAGGACCAAC...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGCAACCTAACGGAGGGCTaGTCTGTGATGGGATCAGCA +
Preference number: 4 (lower is better)
Translates to: QQAHRRCKIHQRLEGFSSNLTEG*SVMGSA
Trigger: TGCTGATCCCATCACAGACCAGCCCTCCGTTAGGTT...GCTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539803.5
ENST00000545280.5
ENST00000671738.1
ENST00000672949.1
CDS-3UTR CCA 90 bp CAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGCAGGAACCTAACGGAGGGCTaGTCTGTGATGGGATCAGCA +
Preference number: 4 (lower is better)
Translates to: QAHRRCKIHQRLEGFSSRNLTEG*SVMGSA
Trigger: TGCTGATCCCATCACAGACCAGCCCTCCGTTAGGTT...CCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539803.5
ENST00000545280.5
ENST00000671738.1
ENST00000672949.1
CDS-3UTR CCA 90 bp ATGATCTGCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTTACCAGGGTCATGGCTaGGAACAGAGGCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: MICKHWACKSAWKQPLGAYQGHG*EQRLPP
Trigger: GGGAGGGAGCCTCTGTTCCCAGCCATGACCCTGGTA...AGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR TCA 90 bp ACAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGGGACAGCCTTTGGAGTaGGGGCTTCTCCAGAGATAT +
Preference number: 4 (lower is better)
Translates to: TAGTQKVQDPPTLGGFLQGQPLE*GLLQRY
Trigger: ATATCTCTGGAGAAGCCCTCACTCCAAAGGCTGTCC...CTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR TCA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCGCAAACTCCTCCCTaGGGATACAAACTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SCISLLSGWGYKCASLHLPQTPP*GYKLPL
Trigger: CAGAGGGAGTTTGTATCCTCAGGGAGGAGTTTGCGG...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp CAGACACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACTCTGGGCAATGGGGGTaGCTGGCCGTCCGCAGACAG +
Preference number: 4 (lower is better)
Translates to: QTLCLCVSSPTQNILSENSGQWG*LAVRRQ
Trigger: CTGTCTGCGGACGGCCAGTCACCCCCATTGCCCAGA...GTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR TCA 90 bp GGAAAGTGTGAGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGAGCCATGCCAAACCCACTaGCGTAGCCCAACAAGCCGC +
Preference number: 4 (lower is better)
Translates to: GKCELEDTIFAEAGIPREPCQTH*RSPTSR
Trigger: GCGGCTTGTTGGGCTACGTCAGTGGGTTTGGCATGG...CTCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp ATCTGCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCAGTGCTCTCTTGGCCTTTaGCATACGGCTCTGGGTACC +
Preference number: 4 (lower is better)
Translates to: ICKHWACKSAWKQPLGAQCSLGL*HTALGT
Trigger: GGTACCCAGAGCCGTATGGCAAAGGCCAAGAGAGCA...CTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR GCA 90 bp TTGCCGGTGAGATGTAACTTGGTGCTGCTGCTGTTGAAGACAGTTTGGTGGTTCTGTGACAGAGTCCCCTaGACAGTCCTGGGACGGCTC +
Preference number: 4 (lower is better)
Translates to: LPVRCNLVLLLLKTVWWFCDRVP*TVLGRL
Trigger: GAGCCGTCCCAGGACTGTGCAGGGGACTCTGTCACA...GAACCACCAAACTGTCTTCAACAGCAGCAGCACCAAGTTACATCTCACCGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673569.1
CDS-3UTR GCA 90 bp ACACAGAACATATTGTCAGAAAACACCTCGGGTCTCTGTCTCTTTTGGAGCCAGTCTGACCAGGGGGCCTaGCCAGAGGGGAGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: TQNILSENTSGLCLFWSQSDQGA*PEGSLA
Trigger: AGCAAGGCTCCCCTCTGGGCAGGCCCCCTGGTCAGA...CTGGCTCCAAAAGAGACAGAGACCCGAGGTGTTTTCTGACAATATGTTCTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp TTGCCGGTGAGATGTAACTTGGTGCTGCTGCTGTTGAAGACAGTTTGGTGGTTCCCGAGGAAGGCTGTGTaGGGAAGGTCAGCCGCAAAC +
Preference number: 4 (lower is better)
Translates to: LPVRCNLVLLLLKTVWWFPRKAV*GRSAAN
Trigger: GTTTGCGGCTGACCTTCCGCACACAGCCTTCCTCGG...GAACCACCAAACTGTCTTCAACAGCAGCAGCACCAAGTTACATCTCACCGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673569.1
CDS-3UTR GCA 90 bp AAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATTGCCGGTGAGAGGTGAGTGCCCCTGCTaGCGCGGCCTGATAATAGGG +
Preference number: 4 (lower is better)
Translates to: KAWISKMVGLNPHVLPVRGECPC*RGLIIG
Trigger: CCCTATTATCAGGCCGCGGCAGCAGGGGCACTCACC...TCTCACCGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR GCA 90 bp CAACACAGAACATATTGTCAGAAAACACCTCGGGTCTCTGTCTCTTTTGGAGCCTGGGGCCCAGGGGGATaGTGTGCTGCAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QHRTYCQKTPRVSVSFGAWGPGG*CAAAPG
Trigger: TCCTGGAGCTGCAGCACAGCATCCCCCTGGGCCCCA...GGCTCCAAAAGAGACAGAGACCCGAGGTGTTTTCTGACAATATGTTCTGTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp CACAACGACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGCAGCCCAACAAGCCGCTaGGGTAGAGGGTCTCATTAT +
Preference number: 4 (lower is better)
Translates to: HNDTVDRVVPQFQHLIYGSPTSR*GRGSHY
Trigger: ATAATGAGACCCTCTACCGCAGCGGCTTGTTGGGCT...GCCATAGATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGTCGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAAATACCACATAGACGCTaGCACTGTCCCCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWEIPHRR*HCPPGR
Trigger: TCTGCCAGGGGGACAGTGGCAGCGTCTATGTGGTAT...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAAGTGATCTTAGCTCACTaGAACCTCCGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWEVILAH*NLRLPG
Trigger: ACCTGGGAGGCGGAGGTTGCAGTGAGCTAAGATCAC...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp AGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGCACAGGCACACAGAAGGTaGAAGATCCACCAACGCTTG +
Preference number: 4 (lower is better)
Translates to: SRHTEGARSTNAWRVSPAQAHRR*KIHQRL
Trigger: CAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTG...TGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539803.5
ENST00000545280.5
ENST00000671738.1
ENST00000672949.1
CDS-3UTR GCA 90 bp TGGGGATCCTCCTCCCCTGATTTGCTCCGGGAAGCACATTCATCAAGGTCCACACAGGCACACAGAAGGTaGAAGATCCACCAACGCTTG +
Preference number: 4 (lower is better)
Translates to: WGSSSPDLLREAHSSRSTQAHRR*KIHQRL
Trigger: CAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTG...TGTGGACCTTGATGAATGTGCTTCCCGGAGCAAATCAGGGGAGGAGGATCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR GCA 90 bp CATCAGGCAGTGACCACATCATCAGTAGTTAGACAGCAGGCACACAGAAGGTGCTCTTCGTGCACTGTGTaGAGAGGGAGCCCGCGTCAT +
Preference number: 4 (lower is better)
Translates to: HQAVTTSSVVRQQAHRRCSSCTV*RGSPRH
Trigger: ATGACGCGGGCTCCCTCTGCACACAGTGCACGAAGA...GCACCTTCTGTGTGCCTGCTGTCTAACTACTGATGATGTGGTCACTGCCTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR GCA 90 bp TCAGTAGTTAGACAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGTCTTCGTGCACTGTGTaGAGAGGGAGCCCGCGTCAT +
Preference number: 4 (lower is better)
Translates to: SVVRQQAHRRCKIHQRLESSCTV*RGSPRH
Trigger: ATGACGCGGGCTCCCTCTGCACACAGTGCACGAAGA...CTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTGTCTAACTACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR GCA 90 bp TGGGGATCCTCCTCCCCTGATTTGCTCCGGGAAGCACATTCATCAAGGTCCACACCTCCTCCCCTGATTTaGTCCGGGAAGCACATTCAT +
Preference number: 4 (lower is better)
Translates to: WGSSSPDLLREAHSSRSTPPPLI*SGKHIH
Trigger: ATGAATGTGCTTCCCGGAGCAAATCAGGGGAGGAGG...TGTGGACCTTGATGAATGTGCTTCCCGGAGCAAATCAGGGGAGGAGGATCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR GCA 90 bp GAACATATTGTCAGAAAACACCTCGGGTCTCTGTCTCTTTTGGAGCCAGGCGTTCCAGGTCCCTGGGGTTaGACAGGTGAGTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: EHIVRKHLGSLSLLEPGVPGPWG*TGECPC
Trigger: ACAGGGGCACTCACCTGTGCAACCCCAGGGACCTGG...AACGCCTGGCTCCAAAAGAGACAGAGACCCGAGGTGTTTTCTGACAATATGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp ACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGCAGGCCTGTGTATTTCCCCCACACTCTaGGTCCAGGCATCTGGAACT +
Preference number: 4 (lower is better)
Translates to: TEGARSTNAWRVSPAGLCISPTL*VQASGT
Trigger: AGTTCCAGATGCCTGGACCCAGAGTGTGGGGGAAAT...ACACAGGCCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR CCA 90 bp TCTGCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCAGCATTTCCCCCACACTCTaGGTCCAGGCATCTGGAACT +
Preference number: 4 (lower is better)
Translates to: SANTGPVNLHGNNRWGLSISPTL*VQASGT
Trigger: AGTTCCAGATGCCTGGACCCAGAGTGTGGGGGAAAT...GCTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CCA 90 bp ACAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGATTTCCCCCACACTCTaGGTCCAGGCATCTGGAACT +
Preference number: 4 (lower is better)
Translates to: TAGTQKVQDPPTLGGFLQISPTL*VQASGT
Trigger: AGTTCCAGATGCCTGGACCCAGAGTGTGGGGGAAAT...CTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR CCA 90 bp CATCAGGCAGTGACCACATCATCAGTAGTTAGACAGCAGGCACACAGAAGGTGCCGCCTGGACAGCCTTTaGAGTGAGGGCTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: HQAVTTSSVVRQQAHRRCRLDSL*SEGFSR
Trigger: TCTGGAGAAGCCCTCACTCCAAAGGCTGTCCAGGCG...GCACCTTCTGTGTGCCTGCTGTCTAACTACTGATGATGTGGTCACTGCCTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR CCA 90 bp GGAAAGTGTGAGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGAGGGGGATGTCAGCTGCTaGGGTAGCTCTTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GKCELEDTIFAEAGIPREGDVSC*GSSWAK
Trigger: CTTGGCCCAAGAGCTACCCCAGCAGCTGACATCCCC...CTCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp ATCTGCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCAGTCCGTGCTGCTCTCTTaGCCTTTGCCATACGGCTCT +
Preference number: 4 (lower is better)
Translates to: ICKHWACKSAWKQPLGAQSVLLS*PLPYGS
Trigger: AGAGCCGTATGGCAAAGGCCAAGAGAGCAGCACGGA...CTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CCA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAACACAGCAAAGCCCTCTaGAGCCTTGATGTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWEHSKAL*SLDVRA
Trigger: AGCACGGACATCAAGGCTCCAGAGGGCTTTGCTGTG...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp ATCTGCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCAGAAGCCCTTGTGGAGGTaGGCAGTCTTGTTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: ICKHWACKSAWKQPLGAQKPLWR*AVLFSE
Trigger: CTCGGAGAACAAGACTGCCCACCTCCACAAGGGCTT...CTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CCA 90 bp GGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGCTGTGTGGCCCAAGAACACAAGTGGTTCTGGACCTTaGCAGGGTTGTCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GWFPSFSISSMAVWPKNTSGSGP*QGCLQV
Trigger: CACCTGGAGACAACCCTGCCAAGGTCCAGAACCACT...TGTGTTCTTGGGCCACACAGCCATAGATGAGATGCTGAAACTGGGGAACCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAATCCTGGCAGTGGTTCTaGACCTTGGCAGGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWESWQWF*TLAGLS
Trigger: AGACAACCCTGCCAAGGTCCAGAACCACTGCCAGGA...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp TTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTCGGGTCTCTCCGCCCCCACGGCCGTaGATACTGGTGAAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: FASHPQHRTYCQKTPRVSPPPRP*ILVKAC
Trigger: GCAAGCCTTCACCAGTATCCACGGCCGTGGGGGCGG...AGAGACCCGAGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp GGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGCTGTGTGGCCCAAGAACACAACACGGTGGACAGGGTaGTTCCCCAGTTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: GWFPSFSISSMAVWPKNTTRWTG*FPSFSI
Trigger: GATGCTGAAACTGGGGAACCACCCTGTCCACCGTGT...TGTGTTCTTGGGCCACACAGCCATAGATGAGATGCTGAAACTGGGGAACCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCGGGTTTCTCTTGCAGTaGCTTGGTGCAACAGTGATG +
Preference number: 4 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLGFLLQ*LGATVM
Trigger: CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCC...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAAACTTCAGTCCAGTGCTaGGCTCACCTGGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWETSVQC*AHLASA
Trigger: TGCAGAAGCCAGGTGAGCCCAGCACTGGACTGAAGT...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp GTAGTTAGACAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTAGATCCACCAACGCTTaGAGGGTTTCTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: VVRQQAHRRCKIHQRLEGRSTNA*RVSPAG
Trigger: GCCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCT...ACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTGTCTAACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539803.5
ENST00000545280.5
ENST00000671738.1
ENST00000672949.1
CDS-3UTR TCA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAACGACGAATGAGATTGTaGCAGAGTCCCCTGCACAGT +
Preference number: 4 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWERRMRL*QSPLHS
Trigger: ACTGTGCAGGGGACTCTGTCACAATCTCATTCGTCG...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp ACATCATCAGTAGTTAGACAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCAGAGGGGAGCCTTGCTaGCCACAGAACTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: TSSVVRQQAHRRCKIHQRRGEPC*PQNWLG
Trigger: TCCAAGCCAGTTCTGTGGTCAGCAAGGCTCCCCTCT...GCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTGTCTAACTACTGATGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR TCA 90 bp ATGATCTGCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCCGCAAACTCCTCCCTaGGGATACAAACTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: MICKHWACKSAWKQPLGAPQTPP*GYKLPL
Trigger: CAGAGGGAGTTTGTATCCTCAGGGAGGAGTTTGCGG...AGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGATCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR TCA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTGAACCGAGGGTCGTCTaGTTCTGGGCAATGGGGGTG +
Preference number: 4 (lower is better)
Translates to: LSGWGYKCASLHLPFGNIEPRVV*FWAMGV
Trigger: CACCCCCATTGCCCAGAATCAGACGACCCTCGGTTC...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp GGCAGACACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAGGCCGTGGATACTGGTaGAGGCTTGCCAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GRHCAFASHPQHRTYCQKGRGYW*RLARGS
Trigger: ACTTCCCCTGGCAAGCCTTCACCAGTATCCACGGCC...TTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR TCA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAACAAGGCGAAAGTTGTTaGGATGTACAGGCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWEQGESC*DVQASR
Trigger: CCGGGAAGCCTGTACATCTCAACAACTTTCGCCTTG...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGAGCTGTGTCAACAGATaGAGTAGGGGAAGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: SCISLLSGWGYKCASLHLSCVNR*SRGRRF
Trigger: GAACCGCCTTCCCCTACTTCATCTGTTGACACAGCT...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGTACTCTAATAGCGGGTaGGTAGCTGACTCTTCCACA +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLYSNSG*VADSST
Trigger: TGTGGAAGAGTCAGCTACTCACCCGCTATTAGAGTA...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCTACTCTAATAGCGGGTaGGTAGCTGACTCTTCCACA +
Preference number: 4 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLYSNSG*VADSST
Trigger: TGTGGAAGAGTCAGCTACTCACCCGCTATTAGAGTA...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp TTAGACAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCGGAGGGCTGGTCTGTaGTGGGATCAGCATATGATC +
Preference number: 4 (lower is better)
Translates to: LDSRHTEGARSTNAWRVSRRAGL*WDQHMI
Trigger: GATCATATGCTGATCCCATCACAGACCAGCCCTCCG...AGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTGTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539803.5
ENST00000545280.5
ENST00000671738.1
ENST00000672949.1
CDS-3UTR TCA 90 bp TCTGCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCAGCCTTCCACTTAAGGCTTaGAGATACCAGGGTCATGGC +
Preference number: 4 (lower is better)
Translates to: SANTGPVNLHGNNRWGLSLPLKA*RYQGHG
Trigger: GCCATGACCCTGGTATCTTCAAGCCTTAAGTGGAAG...GCTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR TCA 90 bp TCATCAGTAGTTAGACAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGATGGGATCAGCATATaGTCCACAGCCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SSVVRQQAHRRCKIHQRLDGISI*STACCR
Trigger: GCGGCAGCAGGCTGTGGATCATATGCTGATCCCATC...CAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTGTCTAACTACTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR GCA 90 bp AAAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATTGCCGGTGAGTGTGACAGAGTCCCCTaGACAGTCCTGGGACGGCTC +
Preference number: 4 (lower is better)
Translates to: KSVDLKNGGLEPSCIAGECDRVP*TVLGRL
Trigger: GAGCCGTCCCAGGACTGTGCAGGGGACTCTGTCACA...CTCACCGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR GCA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTCCGAGGAAGGCTGTGTaGGGAAGGTCAGCCGCAAAC +
Preference number: 4 (lower is better)
Translates to: LSGWGYKCASLHLPFGNIPRKAV*GRSAAN
Trigger: GTTTGCGGCTGACCTTCCGCACACAGCCTTCCTCGG...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAAAGCCCAACAAGCCGCTaGGGTAGAGGGTCTCATTAT +
Preference number: 4 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWESPTSR*GRGSHY
Trigger: ATAATGAGACCCTCTACCGCAGCGGCTTGTTGGGCT...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCAGACACTGTGCCTTTaGGTCTCATCCCCAACACAG +
Preference number: 4 (lower is better)
Translates to: SCISLLSGWGYKCASLHLQTLCL*VSSPTQ
Trigger: CTGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTG...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCCTTGCAGTGGCTTGGTaGAACAGTGATGTGAATAGG +
Preference number: 4 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLLAVAW*NSDVNR
Trigger: CCTATTCACATCACTGTTGCACCAAGCCACTGCAAG...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAACACAGGTGGGGTGTCTaGAAGAACTTCAGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWEHRWGV*KNFSPV
Trigger: CACTGGACTGAAGTTCTTGCAGACACCCCACCTGTG...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp GGCAGACACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAGGGGATGTCAGCTGCTaGGGTAGCTCTTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GRHCAFASHPQHRTYCQKGDVSC*GSSWAK
Trigger: CTTGGCCCAAGAGCTACCCCAGCAGCTGACATCCCC...TTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp TTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTCGGGTCTCTTCCCCTGCACAGTCCTaGGACGGCTCCAGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: FASHPQHRTYCQKTPRVSSPAQS*DGSRSK
Trigger: CTTCGACCTGGAGCCGTCCCAGGACTGTGCAGGGGA...AGAGACCCGAGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp TCAGTAGTTAGACAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGTCCTGGCAGTGGTTCTaGACCTTGGCAGGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: SVVRQQAHRRCKIHQRLESWQWF*TLAGLS
Trigger: AGACAACCCTGCCAAGGTCCAGAACCACTGCCAGGA...CTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTGTCTAACTACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR CCA 90 bp TTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTCGGGTCTCTGGCAATGGGGGTGACTaGCCGTCCGCAGACAGGCAT +
Preference number: 4 (lower is better)
Translates to: FASHPQHRTYCQKTPRVSGNGGD*PSADRH
Trigger: ATGCCTGTCTGCGGACGGCCAGTCACCCCCATTGCC...AGAGACCCGAGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAAGAGAAACACTGTCCTTaGGGTAGATGGTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWEEKHCP*GRWCGQ
Trigger: CTGCCCACACCATCTACCCCAAGGACAGTGTTTCTC...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGTCAGCATCTCATCTATaGCTGTGTGGCCCAAGAACA +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLSASHL*LCGPRT
Trigger: TGTTCTTGGGCCACACAGCCATAGATGAGATGCTGA...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTAGTGCTGGGCTCACCTaGCTTCTGCAGGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: LSGWGYKCASLHLPFGNISAGLT*LLQEMG
Trigger: CCCCATCTCCTGCAGAAGCCAGGTGAGCCCAGCACT...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp GGAAAGTGTGAGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGAGAGCCTCCCGAGTAGCTaGGACTACAGGCACGTGTCA +
Preference number: 4 (lower is better)
Translates to: GKCELEDTIFAEAGIPRESLPSS*DYRHVS
Trigger: TGACACGTGCCTGTAGTCCCAGCTACTCGGGAGGCT...CTCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAACTGGACTTCAACTCCTaGGCTCAAGCGATCCTCTTG +
Preference number: 4 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWELDFNS*AQAILL
Trigger: CAAGAGGATCGCTTGAGCCCAGGAGTTGAAGTCCAG...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CAGGCAGTGACCACATCATCAGTAGTTAGACAGCAGGCACACAGAAGGTGCAAGAGATCCACCAACGCTTaGAGGGTTTCTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: QAVTTSSVVRQQAHRRCKRSTNA*RVSPAG
Trigger: GCCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCT...CTTGCACCTTCTGTGTGCCTGCTGTCTAACTACTGATGATGTGGTCACTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539803.5
ENST00000545280.5
ENST00000671738.1
ENST00000672949.1
CDS-3UTR CCA 90 bp TCAGTAGTTAGACAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGAGATCCACCAACGCTTaGAGGGTTTCTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SVVRQQAHRRCKIHQRLERSTNA*RVSPAG
Trigger: GCCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCT...CTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTGTCTAACTACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539803.5
ENST00000545280.5
ENST00000671738.1
ENST00000672949.1
CDS-3UTR CCA 90 bp CGCGGCCTGATAATAGGGCTCCTGGCAGTGGTTCTGGACCTTGGCAGGGTTGTCTTGAAGACAGTTTGGTaGTTCCAGGCATACACTGAA +
Preference number: 4 (lower is better)
Translates to: RGLIIGLLAVVLDLGRVVLKTVW*FQAYTE
Trigger: TTCAGTGTATGCCTGGAACCACCAAACTGTCTTCAA...GACAACCCTGCCAAGGTCCAGAACCACTGCCAGGAGCCCTATTATCAGGCCGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673569.1
CDS-3UTR TCA 90 bp ATGATCTGCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTGGACAGCCTTTGGAGTaGGGGCTTCTCCAGAGATAT +
Preference number: 4 (lower is better)
Translates to: MICKHWACKSAWKQPLGAGQPLE*GLLQRY
Trigger: ATATCTCTGGAGAAGCCCTCACTCCAAAGGCTGTCC...AGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGATCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR TCA 90 bp AAAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATTGCCGGTGAGCCCTGCTGGCCTCGCTaGTGGGCTGACTATAGTTCA +
Preference number: 4 (lower is better)
Translates to: KSVDLKNGGLEPSCIAGEPCWPR*WADYSS
Trigger: TGAACTATAGTCAGCCCATCAGCGAGGCCAGCAGGG...CTCACCGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR TCA 90 bp TTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTCGGGTCTCTGAACCGAGGGTCGTCTaGTTCTGGGCAATGGGGGTG +
Preference number: 4 (lower is better)
Translates to: FASHPQHRTYCQKTPRVSEPRVV*FWAMGV
Trigger: CACCCCCATTGCCCAGAATCAGACGACCCTCGGTTC...AGAGACCCGAGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR TCA 90 bp GGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGCTGTGTGGCCCAAGAACACACACTCTGGTTCTTCCTaGGAGAAACACTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GWFPSFSISSMAVWPKNTHSGSS*EKHCPW
Trigger: CCAAGGACAGTGTTTCTCTCAGGAAGAACCAGAGTG...TGTGTTCTTGGGCCACACAGCCATAGATGAGATGCTGAAACTGGGGAACCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp CACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTTGTGACAGAGTCCCCTaGACAGTCCTGGGACGGCTC +
Preference number: 4 (lower is better)
Translates to: HCAFASHPQHRTYCQKTPCDRVP*TVLGRL
Trigger: GAGCCGTCCCAGGACTGTGCAGGGGACTCTGTCACA...AGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp TTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTCGGGTCTCTCCGAGGAAGGCTGTGTaGGGAAGGTCAGCCGCAAAC +
Preference number: 4 (lower is better)
Translates to: FASHPQHRTYCQKTPRVSPRKAV*GRSAAN
Trigger: GTTTGCGGCTGACCTTCCGCACACAGCCTTCCTCGG...AGAGACCCGAGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp GGAAAGTGTGAGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGAGATACTGGTGAAGGCTTaGCAGGGGAAGTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GKCELEDTIFAEAGIPREILVKA*QGKLPS
Trigger: GCTGGGCAACTTCCCCTGGCAAGCCTTCACCAGTAT...CTCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp CAACACAGAACATATTGTCAGAAAACACCTCGGGTCTCTGTCTCTTTTGGAGCCCTTCGCCACACCCTATaGCCCAGGACACAATGCCCG +
Preference number: 4 (lower is better)
Translates to: QHRTYCQKTPRVSVSFGALRHTL*PRTQCP
Trigger: CGGGCATTGTGTCCTGGGGCATAGGGTGTGGCGAAG...GGCTCCAAAAGAGACAGAGACCCGAGGTGTTTTCTGACAATATGTTCTGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp CACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTCTTCGCCACACCCTATaGCCCAGGACACAATGCCCG +
Preference number: 4 (lower is better)
Translates to: HCAFASHPQHRTYCQKTPLRHTL*PRTQCP
Trigger: CGGGCATTGTGTCCTGGGGCATAGGGTGTGGCGAAG...AGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp GGAAAGTGTGAGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGAGGGTGGGGGTTTCTCTTaGAGTGGCTTGGTGCAACAG +
Preference number: 4 (lower is better)
Translates to: GKCELEDTIFAEAGIPREGGGFS*SGLVQQ
Trigger: CTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACC...CTCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp ACGAGCTTCACCCTGTATCCCGTGGGGACTGTGATCACAGTGGTTGTTTCAAAGCCTCCTCCCCTGATTTaGTCCGGGAAGCACATTCAT +
Preference number: 4 (lower is better)
Translates to: TSFTLYPVGTVITVVVSKPPPLI*SGKHIH
Trigger: ATGAATGTGCTTCCCGGAGCAAATCAGGGGAGGAGG...CTTTGAAACAACCACTGTGATCACAGTCCCCACGGGATACAGGGTGAAGCTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR GCA 90 bp CTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTCGTGGACATCTGGGACCTaGGAGAGAACTGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LCLCVSSPTQNILSENTSWTSGT*ERTGPG
Trigger: TCCTGGGCCAGTTCTCTCGCAGGTCCCAGATGTCCA...CGAGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTCTGGGTCCAGGCATCTaGAACTGGACATCTGGGACC +
Preference number: 4 (lower is better)
Translates to: LSGWGYKCASLHLPFGNILGPGI*NWTSGT
Trigger: GGTCCCAGATGTCCAGTTCCAGATGCCTGGACCCAG...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTCGCTGGGTCCAGGCATCTaGAACTGGACATCTGGGACC +
Preference number: 4 (lower is better)
Translates to: LCLCVSSPTQNILSENTSLGPGI*NWTSGT
Trigger: GGTCCCAGATGTCCAGTTCCAGATGCCTGGACCCAG...CGAGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp CTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTCGTTTGCCATACGGCTCTaGGTACCCGGGGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: LCLCVSSPTQNILSENTSFAIRL*VPGGCQ
Trigger: CTGACATCCCCCGGGTACCCAGAGCCGTATGGCAAA...CGAGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp GGAAAGTGTGAGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGAGTCCGTGCTGCTCTCTTaGCCTTTGCCATACGGCTCT +
Preference number: 4 (lower is better)
Translates to: GKCELEDTIFAEAGIPRESVLLS*PLPYGS
Trigger: AGAGCCGTATGGCAAAGGCCAAGAGAGCAGCACGGA...CTCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp GTATTGCCGGTGAGATGTAACTTGGTGCTGCTGCTGTTGAAGACAGTTTGGTGGAAGCCCTTGTGGAGGTaGGCAGTCTTGTTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: VLPVRCNLVLLLLKTVWWKPLWR*AVLFSE
Trigger: CTCGGAGAACAAGACTGCCCACCTCCACAAGGGCTT...CCACCAAACTGTCTTCAACAGCAGCAGCACCAAGTTACATCTCACCGGCAATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673569.1
CDS-3UTR CCA 90 bp GCAGTGACCACATCATCAGTAGTTAGACAGCAGGCACACAGAAGGTGCAAGATCAGTGGTTCTGGACCTTaGCAGGGTTGTCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: AVTTSSVVRQQAHRRCKISGSGP*QGCLQV
Trigger: CACCTGGAGACAACCCTGCCAAGGTCCAGAACCACT...GATCTTGCACCTTCTGTGTGCCTGCTGTCTAACTACTGATGATGTGGTCACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR CCA 90 bp GGAAAGTGTGAGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGAGAGTGGTTCTGGACCTTaGCAGGGTTGTCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GKCELEDTIFAEAGIPRESGSGP*QGCLQV
Trigger: CACCTGGAGACAACCCTGCCAAGGTCCAGAACCACT...CTCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTTGCCCAGCTTGGCTCTaGAAGAACCGAGGGTCGTCT +
Preference number: 4 (lower is better)
Translates to: LSGWGYKCASLHLPFGNICPAWL*KNRGSS
Trigger: AGACGACCCTCGGTTCTTCCAGAGCCAAGCTGGGCA...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTCGGGAAGTTGCCCAGCTTaGCTCTGGAAGAACCGAGGG +
Preference number: 4 (lower is better)
Translates to: LCLCVSSPTQNILSENTSGSCPA*LWKNRG
Trigger: CCCTCGGTTCTTCCAGAGCCAAGCTGGGCAACTTCC...CGAGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp ACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGCTGTGTGGTCAGCATCTCATCTATaGCTGTGTGGCCCAAGAACA +
Preference number: 4 (lower is better)
Translates to: TRWTGWFPSFSISSMAVWSASHL*LCGPRT
Trigger: TGTTCTTGGGCCACACAGCCATAGATGAGATGCTGA...CCACACAGCCATAGATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp GGAAAGTGTGAGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGAGACACGGTGGACAGGGTaGTTCCCCAGTTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: GKCELEDTIFAEAGIPRETRWTG*FPSFSI
Trigger: GATGCTGAAACTGGGGAACCACCCTGTCCACCGTGT...CTCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp GAACATATTGTCAGAAAACACCTCGGGTCTCTGTCTCTTTTGGAGCCAGGCGTTTGCACAACGACACGGTaGACAGGGTGGTTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: EHIVRKHLGSLSLLEPGVCTTTR*TGWFPS
Trigger: ACTGGGGAACCACCCTGTCCACCGTGTCGTTGTGCA...AACGCCTGGCTCCAAAAGAGACAGAGACCCGAGGTGTTTTCTGACAATATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp GGCAGACACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAGGTCTCTGTCTCTTTTaGAGCCAGGCGTTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GRHCAFASHPQHRTYCQKGLCLF*SQALQA
Trigger: GGCCTGCAACGCCTGGCTCCAAAAGAGACAGAGACC...TTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp GGCAGACACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAAGGACACAATGCCCGTaGCCACCCAGTGATGGGCAT +
Preference number: 4 (lower is better)
Translates to: GRHCAFASHPQHRTYCQKRTQCP*PPSDGH
Trigger: ATGCCCATCACTGGGTGGCCACGGGCATTGTGTCCT...TTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTAGGAGGAGCGGTCTGTaGGACTCTGCTTCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LSGWGYKCASLHLPFGNIRRSGL*DSASCL
Trigger: CAGACAGGAAGCAGAGTCCCACAGACCGCTCCTCCT...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp GGAAAGTGTGAGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGAGGTCACACACCAGCTGTaGGACTTGGGCAAGTCCCTT +
Preference number: 4 (lower is better)
Translates to: GKCELEDTIFAEAGIPREVTHQL*DLGKSL
Trigger: AAGGGACTTGCCCAAGTCCCACAGCTGGTGTGTGAC...CTCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAAAGTATTGCAGCACACTaGGAAGAGCACAGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWESIAAH*EEHSLC
Trigger: GCAGAGACTGTGCTCTTCCCAGTGTGCTGCAATACT...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTCCATGTTGGCCAGGATaGGCTGGATCTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: LSGWGYKCASLHLPFGNIPCWPG*AGSPDL
Trigger: GAGGTCAGGAGATCCAGCCCATCCTGGCCAACATGG...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CGCGGCCTGATAATAGGGCTCCTGGCAGTGGTTCTGGACCTTGGCAGGGTTGTCTTTCATTCAAAAGCGTaGATCTCAAAAATGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RGLIIGLLAVVLDLGRVVFHSKA*ISKMVG
Trigger: GCCCACCATTTTTGAGATCCACGCTTTTGAATGAAA...GACAACCCTGCCAAGGTCCAGAACCACTGCCAGGAGCCCTATTATCAGGCCGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR TCA 90 bp AACCCTCATGTATTGCCGGTGAGATGTAACTTGGTGCTGCTGCTGTTGAAGACACCGCAAACTCCTCCCTaGGGATACAAACTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: NPHVLPVRCNLVLLLLKTPQTPP*GYKLPL
Trigger: CAGAGGGAGTTTGTATCCTCAGGGAGGAGTTTGCGG...TGTCTTCAACAGCAGCAGCACCAAGTTACATCTCACCGGCAATACATGAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673569.1
CDS-3UTR TCA 90 bp CACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTCCCTGCTGGCCTCGCTaGTGGGCTGACTATAGTTCA +
Preference number: 4 (lower is better)
Translates to: HCAFASHPQHRTYCQKTPPCWPR*WADYSS
Trigger: TGAACTATAGTCAGCCCATCAGCGAGGCCAGCAGGG...AGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR TCA 90 bp GAACATATTGTCAGAAAACACCTCGGGTCTCTGTCTCTTTTGGAGCCAGGCGTTCAGACAGGCATACACTaGAGAACCTCCTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: EHIVRKHLGSLSLLEPGVQTGIH*RTSSPS
Trigger: GGATGGGGAGGAGGTTCTTCAGTGTATGCCTGTCTG...AACGCCTGGCTCCAAAAGAGACAGAGACCCGAGGTGTTTTCTGACAATATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR TCA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCAGAAATGCAATGCAATaGAAACCCCTTCCTCCATAC +
Preference number: 4 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLRNAMQ*KPLPPY
Trigger: GTATGGAGGAAGGGGTTTTCATTGCATTGCATTTCT...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp CCTCCCCAGGCTTTTCTTATCAGCAGAGATCTTGACATAATCATAGAAGCAGCCCAGCCAGGCATACACTaGAGAACCTCCTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: PPQAFLISRDLDIIIEAAQPGIH*RTSSPS
Trigger: GGATGGGGAGGAGGTTCTTCAGTGTATGCCTGGCTG...GGCTGCTTCTATGATTATGTCAAGATCTCTGCTGATAAGAAAAGCCTGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR TCA 90 bp CATTCAAAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATTGCCGGCTGCAGGCATACACTaGAGAACCTCCTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: HSKAWISKMVGLNPHVLPAAGIH*RTSSPS
Trigger: GGATGGGGAGGAGGTTCTTCAGTGTATGCCTGCAGC...CGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTTTGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672500.1
CDS-3UTR TCA 90 bp GTATTGCCGGTGAGATGTAACTTGGTGCTGCTGCTGTTGAAGACAGTTTGGTGGTGGTGCTGCTGCTGTTaGAGACAGTTTGGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: VLPVRCNLVLLLLKTVWWWCCCC*RQFGGS
Trigger: GGAACCACCAAACTGTCTTCAACAGCAGCAGCACCA...CCACCAAACTGTCTTCAACAGCAGCAGCACCAAGTTACATCTCACCGGCAATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673569.1
CDS-3UTR TCA 90 bp CTACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATCCATCTTTAAAAATGAGATaGTCTGCAAACACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LRLSLNRVACQQGQGWDPSLKMR*SANTGP
Trigger: AGGCCCAGTGTTTGCAGATCATCTCATTTTTAAAGA...TGGATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR GCA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTTGCTCTCTTGGCCTTTaGCATACGGCTCTGGGTACC +
Preference number: 4 (lower is better)
Translates to: LSGWGYKCASLHLPFGNICSLGL*HTALGT
Trigger: GGTACCCAGAGCCGTATGGCAAAGGCCAAGAGAGCA...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp CATTCAAAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATTGCCGAGGGTTGTCTCCAGGTaGGTTGATGGCCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: HSKAWISKMVGLNPHVLPRVVSR*VDGLRA
Trigger: GGCTCTGAGGCCATCAACGCACCTGGAGACAACCCT...CGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTTTGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR GCA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTATACCACATAGACGCTaGCACTGTCCCCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: LSGWGYKCASLHLPFGNIIPHRR*HCPPGR
Trigger: TCTGCCAGGGGGACAGTGGCAGCGTCTATGTGGTAT...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp TCATCAGTAGTTAGACAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGCAGGCACACAGAAGGTaGAAGATCCACCAACGCTTG +
Preference number: 4 (lower is better)
Translates to: SSVVRQQAHRRCKIHQRLQAHRR*KIHQRL
Trigger: CAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTG...CAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTGTCTAACTACTGATGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539803.5
ENST00000545280.5
ENST00000671738.1
ENST00000672949.1
CDS-3UTR CCA 90 bp TTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTCGGGTCTCTCCACCACATTGCGCCTaGACAGCCTTTGGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: FASHPQHRTYCQKTPRVSPPHCA*TAFGVR
Trigger: CCTCACTCCAAAGGCTGTCCAGGCGCAATGTGGTGG...AGAGACCCGAGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp GAACATATTGTCAGAAAACACCTCGGGTCTCTGTCTCTTTTGGAGCCAGGCGTTAAGCCCTTGTGGAGGTaGGCAGTCTTGTTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: EHIVRKHLGSLSLLEPGVKPLWR*AVLFSE
Trigger: CTCGGAGAACAAGACTGCCCACCTCCACAAGGGCTT...AACGCCTGGCTCCAAAAGAGACAGAGACCCGAGGTGTTTTCTGACAATATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp CTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTCGAAGCCCTTGTGGAGGTaGGCAGTCTTGTTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: LCLCVSSPTQNILSENTSKPLWR*AVLFSE
Trigger: CTCGGAGAACAAGACTGCCCACCTCCACAAGGGCTT...CGAGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTAGTGGTTCTGGACCTTaGCAGGGTTGTCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LSGWGYKCASLHLPFGNISGSGP*QGCLQV
Trigger: CACCTGGAGACAACCCTGCCAAGGTCCAGAACCACT...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp AAAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATTGCCGGTGAGTCCTGGCAGTGGTTCTaGACCTTGGCAGGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: KSVDLKNGGLEPSCIAGESWQWF*TLAGLS
Trigger: AGACAACCCTGCCAAGGTCCAGAACCACTGCCAGGA...CTCACCGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR CCA 90 bp TTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTCGGGTCTCTGGAAGTTGCCCAGCTTaGCTCTGGAAGAACCGAGGG +
Preference number: 4 (lower is better)
Translates to: FASHPQHRTYCQKTPRVSGSCPA*LWKNRG
Trigger: CCCTCGGTTCTTCCAGAGCCAAGCTGGGCAACTTCC...AGAGACCCGAGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp TTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTCGGGTCTCTTGCACAACGACACGGTaGACAGGGTGGTTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: FASHPQHRTYCQKTPRVSCTTTR*TGWFPS
Trigger: ACTGGGGAACCACCCTGTCCACCGTGTCGTTGTGCA...AGAGACCCGAGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp GGAAAGTGTGAGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGAGGGACTCCTAAGGTGTTaGGATTACAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GKCELEDTIFAEAGIPREGLLRC*DYRREP
Trigger: TGGCTCACGCCTGTAATCCCAACACCTTAGGAGTCC...CTCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTGGGGTTTCACCATGTTaGCCAGGATGGGCTGGATCT +
Preference number: 4 (lower is better)
Translates to: LSGWGYKCASLHLPFGNIGVSPC*PGWAGS
Trigger: AGATCCAGCCCATCCTGGCCAACATGGTGAAACCCC...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
3UTR CAA 72 bp GGCTTGAACCCTCATGTATTGCCGGTGAGATGTAACTaGGTGCTGCTGCAGGCATACACTGAAGAACCTCCT +
Preference number: 4 (lower is better)
Translates to: GLNPHVLPVRCN*VLLQAYTEEPP
Trigger: AGGAGGTTCTTCAGTGTATGCCTGCAGCAGCACCAAGTTACATCTCACCGGCAATACATGAGGGTTCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534969.1
ENST00000672500.1
CDS-3UTR TCA 90 bp AAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATTGCCGGTGAGACGACGAATGAGATTGTaGCAGAGTCCCCTGCACAGT +
Preference number: 4 (lower is better)
Translates to: KAWISKMVGLNPHVLPVRRRMRL*QSPLHS
Trigger: ACTGTGCAGGGGACTCTGTCACAATCTCATTCGTCG...TCTCACCGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR TCA 90 bp CTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTCGATCCGAACCGACGAATaGGATTGTGACAGAGTCCCC +
Preference number: 4 (lower is better)
Translates to: LCLCVSSPTQNILSENTSIRTDE*DCDRVP
Trigger: GGGGACTCTGTCACAATCTCATTCGTCGGTTCGGAT...CGAGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR TCA 90 bp AAAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATTGCCGGTGAGATCCGAACCGACGAATaGGATTGTGACAGAGTCCCC +
Preference number: 4 (lower is better)
Translates to: KSVDLKNGGLEPSCIAGEIRTDE*DCDRVP
Trigger: GGGGACTCTGTCACAATCTCATTCGTCGGTTCGGAT...CTCACCGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR TCA 90 bp CAGACACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACCCGCAAACTCCTCCCTaGGGATACAAACTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: QTLCLCVSSPTQNILSENPQTPP*GYKLPL
Trigger: CAGAGGGAGTTTGTATCCTCAGGGAGGAGTTTGCGG...GTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR TCA 90 bp CATTCAAAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATTGCCGCCGCAAACTCCTCCCTaGGGATACAAACTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: HSKAWISKMVGLNPHVLPPQTPP*GYKLPL
Trigger: CAGAGGGAGTTTGTATCCTCAGGGAGGAGTTTGCGG...CGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTTTGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR TCA 90 bp GGAAAGTGTGAGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGAGCACTCTGGTTCTTCCTaGGAGAAACACTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GKCELEDTIFAEAGIPREHSGSS*EKHCPW
Trigger: CCAAGGACAGTGTTTCTCTCAGGAAGAACCAGAGTG...CTCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp TTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTCGGGTCTCTTGCTCTCTTGGCCTTTaGCATACGGCTCTGGGTACC +
Preference number: 4 (lower is better)
Translates to: FASHPQHRTYCQKTPRVSCSLGL*HTALGT
Trigger: GGTACCCAGAGCCGTATGGCAAAGGCCAAGAGAGCA...AGAGACCCGAGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp GGCAGACACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAACAGACACTGTGCCTTTaGGTCTCATCCCCAACACAG +
Preference number: 4 (lower is better)
Translates to: GRHCAFASHPQHRTYCQKQTLCL*VSSPTQ
Trigger: CTGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTG...TTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTCAGACACTGTGCCTTTaGGTCTCATCCCCAACACAG +
Preference number: 4 (lower is better)
Translates to: LSGWGYKCASLHLPFGNIQTLCL*VSSPTQ
Trigger: CTGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTG...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp GAACATATTGTCAGAAAACACCTCGGGTCTCTGTCTCTTTTGGAGCCAGGCGTTCAGACACTGTGCCTTTaGGTCTCATCCCCAACACAG +
Preference number: 4 (lower is better)
Translates to: EHIVRKHLGSLSLLEPGVQTLCL*VSSPTQ
Trigger: CTGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTG...AACGCCTGGCTCCAAAAGAGACAGAGACCCGAGGTGTTTTCTGACAATATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR GCA 90 bp AATGTGCAAGACACTTTCCCAGGCAATAGATTGCAAGAATTCACAGAGCTGATGCCGACAGCGTCTTCGTaGACTGTGTGCAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: NVQDTFPGNRLQEFTELMPTASS*TVCRGS
Trigger: GCTCCCTCTGCACACAGTGCACGAAGACGCTGTCGG...CATCAGCTCTGTGAATTCTTGCAATCTATTGCCTGGGAAAGTGTCTTGCACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR CCA 90 bp CAACACAGAACATATTGTCAGAAAACACCTCGGGTCTCTGTCTCTTTTGGAGCCCACAGCAAAGCCCTCTaGAGCCTTGATGTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: QHRTYCQKTPRVSVSFGAHSKAL*SLDVRA
Trigger: AGCACGGACATCAAGGCTCCAGAGGGCTTTGCTGTG...GGCTCCAAAAGAGACAGAGACCCGAGGTGTTTTCTGACAATATGTTCTGTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp GGCAGACACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAGAGAAACACTGTCCTTaGGGTAGATGGTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GRHCAFASHPQHRTYCQKEKHCP*GRWCGQ
Trigger: CTGCCCACACCATCTACCCCAAGGACAGTGTTTCTC...TTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp GAACATATTGTCAGAAAACACCTCGGGTCTCTGTCTCTTTTGGAGCCAGGCGTTGACCTGCGAGAGAACTaGCCCAGGATAGGGAACAAA +
Preference number: 4 (lower is better)
Translates to: EHIVRKHLGSLSLLEPGVDLREN*PRIGNK
Trigger: TTTGTTCCCTATCCTGGGCCAGTTCTCTCGCAGGTC...AACGCCTGGCTCCAAAAGAGACAGAGACCCGAGGTGTTTTCTGACAATATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp GGCAGACACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAGACCTGCGAGAGAACTaGCCCAGGATAGGGAACAAA +
Preference number: 4 (lower is better)
Translates to: GRHCAFASHPQHRTYCQKDLREN*PRIGNK
Trigger: TTTGTTCCCTATCCTGGGCCAGTTCTCTCGCAGGTC...TTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp CACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTCTGGAACTGGACATCTaGGACCTGCGAGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: HCAFASHPQHRTYCQKTPLELDI*DLRENW
Trigger: CCAGTTCTCTCGCAGGTCCCAGATGTCCAGTTCCAG...AGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp TCATCAGTAGTTAGACAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGATGAGATATTGCGCCTaGACAGCCTTTGGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: SSVVRQQAHRRCKIHQRLMRYCA*TAFGVR
Trigger: CCTCACTCCAAAGGCTGTCCAGGCGCAATATCTCAT...CAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTGTCTAACTACTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR CCA 90 bp GCAGTGACCACATCATCAGTAGTTAGACAGCAGGCACACAGAAGGTGCAAGATCATGAGATATTGCGCCTaGACAGCCTTTGGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: AVTTSSVVRQQAHRRCKIMRYCA*TAFGVR
Trigger: CCTCACTCCAAAGGCTGTCCAGGCGCAATATCTCAT...GATCTTGCACCTTCTGTGTGCCTGCTGTCTAACTACTGATGATGTGGTCACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
3UTR CAA 72 bp GGCTTGAACCCTCATGTATTGCCGGTGAGATGTAACTaGGTGCTGCTGCTGTTGAAGACAGTTTGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: GLNPHVLPVRCN*VLLLLKTVWWF
Trigger: GAACCACCAAACTGTCTTCAACAGCAGCAGCACCAAGTTACATCTCACCGGCAATACATGAGGGTTCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537833.5
ENST00000673569.1
3UTR CAA 72 bp TGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATaGCCGGTGAGATGTAACTTGGTGCTGCTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: WISKMVGLNPHV*PVRCNLVLLQA
Trigger: TGCCTGCAGCAGCACCAAGTTACATCTCACCGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000534969.1
ENST00000672500.1
3UTR CAA 72 bp TCGTTGGAGAAGTCTGTGTGGAAGGTCAGCAGCATCTaGTTCCCTTGGGACATAAATTCCTTCTTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: SLEKSVWKVSSI*FPWDINSFFPG
Trigger: CCCGGGAAAGAAGGAATTTATGTCCCAAGGGAACAAGATGCTGCTGACCTTCCACACAGACTTCTCCAACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR TCA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAAGCCATTAGGAAAGTGTaGGCTAGAGGATACCATTTT +
Preference number: 4 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWEAIRKV*ARGYHF
Trigger: AAAATGGTATCCTCTAGCTCACACTTTCCTAATGGC...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp GCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCAGCTACTCTTTAAAAATGAGATaGTCTGCAAACACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: ANTGPVNLHGNNRWGLSYSLKMR*SANTGP
Trigger: AGGCCCAGTGTTTGCAGATCATCTCATTTTTAAAGA...GTAGCTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR GCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGAGCTGTTTCTATAATTaGATCTTGGAGCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLSCFYN*ILELQN
Trigger: ATTCTGCAGCTCCAAGATGCAATTATAGAAACAGCT...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR GCA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGGTGCATCATTGCACCTaGCTTTTGGGAATATTTTTA +
Preference number: 4 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLVHHCT*LLGIFL
Trigger: TAAAAATATTCCCAAAAGGCAGGTGCAATGATGCAC...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp ACACAGAACATATTGTCAGAAAACACCTCGGGTCTCTGTCTCTTTTGGAGCCAGATTTCCCCCACACTCTaGGTCCAGGCATCTGGAACT +
Preference number: 4 (lower is better)
Translates to: TQNILSENTSGLCLFWSQISPTL*VQASGT
Trigger: AGTTCCAGATGCCTGGACCCAGAGTGTGGGGGAAAT...CTGGCTCCAAAAGAGACAGAGACCCGAGGTGTTTTCTGACAATATGTTCTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
3UTR CAA 72 bp GTATTGCCGGTGAGATGTAACTTGGTGCTGCTGCTGTaGAAGACAGTTTGGTGGTTCCAGGCATACACTGAA +
Preference number: 4 (lower is better)
Translates to: VLPVRCNLVLLL*KTVWWFQAYTE
Trigger: TTCAGTGTATGCCTGGAACCACCAAACTGTCTTCAACAGCAGCAGCACCAAGTTACATCTCACCGGCAATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537833.5
ENST00000673569.1
3UTR CAA 72 bp TGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATaGCCGGTGAGATGTAACTTGGTGCTGCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: WISKMVGLNPHV*PVRCNLVLLLL
Trigger: CAACAGCAGCAGCACCAAGTTACATCTCACCGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537833.5
ENST00000673569.1
CDS-3UTR TCA 90 bp TGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATTGCCGGTGAGATGTAACCAAAAATGGTGGGCTTaGACCCTCATGTATTGCCGG +
Preference number: 4 (lower is better)
Translates to: WISKMVGLNPHVLPVRCNQKWWA*TLMYCR
Trigger: CCGGCAATACATGAGGGTTCAAGCCCACCATTTTTG...GTTACATCTCACCGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR CCA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTTCAGCATCTCATCTATaGCTGTGTGGCCCAAGAACA +
Preference number: 4 (lower is better)
Translates to: LSGWGYKCASLHLPFGNISASHL*LCGPRT
Trigger: TGTTCTTGGGCCACACAGCCATAGATGAGATGCTGA...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp GGAAAGTGTGAGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGAGAGAAATGCAATGCAATaGAAACCCCTTCCTCCATAC +
Preference number: 4 (lower is better)
Translates to: GKCELEDTIFAEAGIPRERNAMQ*KPLPPY
Trigger: GTATGGAGGAAGGGGTTTTCATTGCATTGCATTTCT...CTCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAAGACCATATAGCAACTTaGCTCTTGATGCTAACAAAT +
Preference number: 4 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWEDHIAT*LLMLTN
Trigger: ATTTGTTAGCATCAAGAGTCAAGTTGCTATATGGTC...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGGACCATATAGCAACTTaGCTCTTGATGCTAACAAAT +
Preference number: 4 (lower is better)
Translates to: SCISLLSGWGYKCASLHLDHIAT*LLMLTN
Trigger: ATTTGTTAGCATCAAGAGTCAAGTTGCTATATGGTC...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR TCA 90 bp GAGGGTTTTCTGTTTAATGTGCAAGACACTTTCCCAGGCAATAGATTGCAAGAACCTGTGTGTCAGAGCTaGGGACTGAACCTAACGGAG +
Preference number: 4 (lower is better)
Translates to: EGFLFNVQDTFPGNRLQEPVCQS*GLNLTE
Trigger: CTCCGTTAGGTTCAGTCCTCAGCTCTGACACACAGG...TTCTTGCAATCTATTGCCTGGGAAAGTGTCTTGCACATTAAACAGAAAACCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR GCA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGGTGCATCATTGCACCTaGCTTTTGGGAATATTTTTA +
Preference number: 4 (lower is better)
Translates to: SCISLLSGWGYKCASLHLVHHCT*LLGIFL
Trigger: TAAAAATATTCCCAAAAGGCAGGTGCAATGATGCAC...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTTCATCTATGGCTGTGTaGCCCAAGAACACATTCACA +
Preference number: 4 (lower is better)
Translates to: LSGWGYKCASLHLPFGNISSMAV*PKNTFT
Trigger: TGTGAATGTGTTCTTGGGCCACACAGCCATAGATGA...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp GAACATATTGTCAGAAAACACCTCGGGTCTCTGTCTCTTTTGGAGCCAGGCGTTTCATCTATGGCTGTGTaGCCCAAGAACACATTCACA +
Preference number: 4 (lower is better)
Translates to: EHIVRKHLGSLSLLEPGVSSMAV*PKNTFT
Trigger: TGTGAATGTGTTCTTGGGCCACACAGCCATAGATGA...AACGCCTGGCTCCAAAAGAGACAGAGACCCGAGGTGTTTTCTGACAATATGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp CACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTTCAGCATCTCATCTATaGCTGTGTGGCCCAAGAACA +
Preference number: 4 (lower is better)
Translates to: HCAFASHPQHRTYCQKTPSASHL*LCGPRT
Trigger: TGTTCTTGGGCCACACAGCCATAGATGAGATGCTGA...AGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CCA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTTCTCTTGCAGTGGCTTaGTGCAACAGTGATGTGAAT +
Preference number: 4 (lower is better)
Translates to: LSGWGYKCASLHLPFGNISLAVA*CNSDVN
Trigger: ATTCACATCACTGTTGCACCAAGCCACTGCAAGAGA...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp AATGTGCAAGACACTTTCCCAGGCAATAGATTGCAAGAATTCACAGAGCTGATGAACCTAACGGAGGGCTaGTCTGTGATGGGATCAGCA +
Preference number: 4 (lower is better)
Translates to: NVQDTFPGNRLQEFTELMNLTEG*SVMGSA
Trigger: TGCTGATCCCATCACAGACCAGCCCTCCGTTAGGTT...CATCAGCTCTGTGAATTCTTGCAATCTATTGCCTGGGAAAGTGTCTTGCACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR TCA 90 bp ATGCTTTCATTCAAAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTCTCATGTATTGCCGGTaGGATGTAACTTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: MLSFKSVDLKNGGLEPSCLMYCR*DVTWCC
Trigger: GCAGCACCAAGTTACATCTCACCGGCAATACATGAG...ACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTTTGAATGAAAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR GCA 90 bp GGAAAGTGTGAGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGAGAGCTGTTTCTATAATTaGATCTTGGAGCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: GKCELEDTIFAEAGIPRESCFYN*ILELQN
Trigger: ATTCTGCAGCTCCAAGATGCAATTATAGAAACAGCT...CTCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CCA 90 bp AAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATTGCCGGTGAGATTTCATTCAAAAGCGTaGATCTCAAAAATGGTGGGC +
Preference number: 4 (lower is better)
Translates to: KAWISKMVGLNPHVLPVRFHSKA*ISKMVG
Trigger: GCCCACCATTTTTGAGATCCACGCTTTTGAATGAAA...TCTCACCGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
3UTR CAA 72 bp CTGTTTAATGTGCAAGACACTTTCCCAGGCAATAGATaGCAAGAATTCACAGAGCTGATGCAGTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: LFNVQDTFPGNR*QEFTELMQFPI
Trigger: GATGGGGAACTGCATCAGCTCTGTGAATTCTTGCAATCTATTGCCTGGGAAAGTGTCTTGCACATTAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
3UTR CAA 72 bp TTTCATTCAAAAGCGTGGATCTCAAAAATGGTGGGCTaGAACCCTCATGTATTGCCGGTGAGATGTAACTTG +
Preference number: 4 (lower is better)
Translates to: FHSKAWISKMVG*NPHVLPVRCNL
Trigger: CAAGTTACATCTCACCGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTTTGAATGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000534969.1
ENST00000537833.5
ENST00000672500.1
ENST00000673569.1
CDS CCA 90 bp AGGGCAAGGTGGGGCCGCGCAGCTATGGCCGGAAGCCTGTGGGTGTaGGAGGAGCGGGGGAGCCGCGCTAGGACTCAGAGGCCTCGCGAG +
Preference number: 5 (lower is better)
Translates to: RARWGRAAMAGSLWV*EERGSRARTQRPRE
Trigger: CTCGCGAGGCCTCTGAGTCCTAGCGCGGCTCCCCCGCTCCTCCCACACCCACAGGCTTCCGGCCATAGCTGCGCGGCCCCACCTTGCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000543941.1
ENST00000672174.1
CDS CCA 90 bp TGGCCTTTGCCATACGGCTCTGGGTACCCGGGGGATGTCAGCTGCTaGGGTAGCTCTTGGGCCAAGAGGACGGAGCCCCGGGTTGGGCAA +
Preference number: 5 (lower is better)
Translates to: WPLPYGSGYPGDVSC*GSSWAKRTEPRVGQ
Trigger: TTGCCCAACCCGGGGCTCCGTCCTCTTGGCCCAAGAGCTACCCCAGCAGCTGACATCCCCCGGGTACCCAGAGCCGTATGGCAAAGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000266542.9
ENST00000539927.1
ENST00000543933.5
ENST00000543941.1
ENST00000544702.5
ENST00000545337.1
ENST00000671752.1
ENST00000672115.1
ENST00000672174.1
ENST00000672447.1
ENST00000672727.1
ENST00000672753.1
CDS-3UTR CAA 90 bp AGCGGTCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGAAGTTGCCCAGCTaGGCTCTGGAAGAACCGAGG +
Preference number: 5 (lower is better)
Translates to: SGLWDSASCLGWGGLAGWGKLPS*ALEEPR
Trigger: CCTCGGTTCTTCCAGAGCCAAGCTGGGCAACTTCCC...CCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGACCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTTTTTGGAGCCAGGCGTaGCAGGCCTCCCTGGGAGCT +
Preference number: 5 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVFWSQA*QASLGA
Trigger: AGCTCCCAGGGAGGCCTGCAACGCCTGGCTCCAAAA...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp AGCGGTCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTCTCTGTCTCTTTaGGAGCCAGGCGTTGCAGGC +
Preference number: 5 (lower is better)
Translates to: SGLWDSASCLGWGGLAGWGSLSL*EPGVAG
Trigger: GCCTGCAACGCCTGGCTCCAAAAGAGACAGAGACCC...CCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGACCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp AGCGGTCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGCTGCTCTCTTGGCCTTaGCCATACGGCTCTGGGTAC +
Preference number: 5 (lower is better)
Translates to: SGLWDSASCLGWGGLAGWLLSWP*PYGSGY
Trigger: GTACCCAGAGCCGTATGGCAAAGGCCAAGAGAGCAG...CCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGACCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp CCCCTGCTGCCGCGGCCTGATAATAGGGCTCCTGGCAGTGGTTCTGGACCTTGGGCCCAGAGGGGAGCCTaGCTGACCACAGAACTGGCT +
Preference number: 5 (lower is better)
Translates to: PLLPRPDNRAPGSGSGPWAQRGA*LTTELA
Trigger: AGCCAGTTCTGTGGTCAGCAAGGCTCCCCTCTGGGC...CCAAGGTCCAGAACCACTGCCAGGAGCCCTATTATCAGGCCGCGGCAGCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR CAA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTGTTCACAGCCACGGTTaGGTAGAGGGCCAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVVHSHG*VEGQEA
Trigger: GGCTTCCTGGCCCTCTACCAAACCGTGGCTGTGAAC...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp CGCTGCGGTAGAGGGTCTCATTATCGGGCAGACAGACCGGGAGGACGTTGGGGCTTTTGGAGCCAGGCGTaGCAGGCCTCCCTGGGAGCT +
Preference number: 5 (lower is better)
Translates to: RCGRGSHYRADRPGGRWGFWSQA*QASLGA
Trigger: AGCTCCCAGGGAGGCCTGCAACGCCTGGCTCCAAAA...GCCCCAACGTCCTCCCGGTCTGTCTGCCCGATAATGAGACCCTCTACCGCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp GGAGCTACAGGCAGCCTCGAGTACTTCAGCTCAGTAGTTAGCCAGCCCATCTCCGGACGGAGCCCCGGGTaGGGCAAGCCTGGAGGACTC +
Preference number: 5 (lower is better)
Translates to: GATGSLEYFSSVVSQPISGRSPG*GKPGGL
Trigger: GAGTCCTCCAGGCTTGCCCAACCCGGGGCTCCGTCC...GGAGATGGGCTGGCTAACTACTGAGCTGAAGTACTCGAGGCTGCCTGTAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTAAGCCCTCTGGAGCCTaGATGTCCGTGCTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVKPSGA*MSVLLS
Trigger: AGAGAGCAGCACGGACATCAAGGCTCCAGAGGGCTT...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp TGCTGCCGCGGCCTGATAATAGGGCTCCTGGCAGTGGTTCTGGACCTTGGCAGGGCCCAGAGGGGAGCCTaGCTGACCACAGAACTGGCT +
Preference number: 5 (lower is better)
Translates to: CCRGLIIGLLAVVLDLGRAQRGA*LTTELA
Trigger: AGCCAGTTCTGTGGTCAGCAAGGCTCCCCTCTGGGC...CCTGCCAAGGTCCAGAACCACTGCCAGGAGCCCTATTATCAGGCCGCGGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR CAA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTTGGAGGTGGGCAGTCTaGTTCTCCGAGGAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVWRWAV*FSEEGC
Trigger: ACAGCCTTCCTCGGAGAACAAGACTGCCCACCTCCA...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp CCCTGCTGCCGCGGCCTGATAATAGGGCTCCTGGCAGTGGTTCTGGACCTTGGCTTGTCTCCAGGTGCGTaGATGGCCTCAGAGCCCCTG +
Preference number: 5 (lower is better)
Translates to: PCCRGLIIGLLAVVLDLGLSPGA*MASEPL
Trigger: CAGGGGCTCTGAGGCCATCAACGCACCTGGAGACAA...GCCAAGGTCCAGAACCACTGCCAGGAGCCCTATTATCAGGCCGCGGCAGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR CAA 90 bp CATTATCGGGCAGACAGACCGGGAGGACGTTGGGGCCCAGGGGGATGCTGTGCTGGGTCTCTGTCTCTTTaGGAGCCAGGCGTTGCAGGC +
Preference number: 5 (lower is better)
Translates to: HYRADRPGGRWGPGGCCAGSLSL*EPGVAG
Trigger: GCCTGCAACGCCTGGCTCCAAAAGAGACAGAGACCC...AGCACAGCATCCCCCTGGGCCCCAACGTCCTCCCGGTCTGTCTGCCCGATAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp CGCTGCGGTAGAGGGTCTCATTATCGGGCAGACAGACCGGGAGGACGTTGGGGCGAAATAGGCTCGGAGTaGAAGCTGCTGCCGCGGCCT +
Preference number: 5 (lower is better)
Translates to: RCGRGSHYRADRPGGRWGEIGSE*KLLPRP
Trigger: AGGCCGCGGCAGCAGCTTCAACTCCGAGCCTATTTC...GCCCCAACGTCCTCCCGGTCTGTCTGCCCGATAATGAGACCCTCTACCGCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS TCA 90 bp CAGGGGAAGTTGCCCAGCTTGGCTCTGGAAGAACCGAGGGTCGTCTaGTTCTGGGCAATGGGGGTGACTGGCCGTCCGCAGACCACGGTT +
Preference number: 5 (lower is better)
Translates to: QGKLPSLALEEPRVV*FWAMGVTGRPQTTV
Trigger: AACCGTGGTCTGCGGACGGCCAGTCACCCCCATTGCCCAGAATCAGACGACCCTCGGTTCTTCCAGAGCCAAGCTGGGCAACTTCCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534950.1
ENST00000673022.1
CDS-3UTR CAA 90 bp GACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGCTGTGTGGGACGGAGCCCCGGGTaGGGCAAGCCTGGAGGACTC +
Preference number: 5 (lower is better)
Translates to: DTVDRVVPQFQHLIYGCVGRSPG*GKPGGL
Trigger: GAGTCCTCCAGGCTTGCCCAACCCGGGGCTCCGTCC...CACACAGCCATAGATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp GCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCAGCTACGGACGGAGCCCCGGGTaGGGCAAGCCTGGAGGACTC +
Preference number: 5 (lower is better)
Translates to: ANTGPVNLHGNNRWGLSYGRSPG*GKPGGL
Trigger: GAGTCCTCCAGGCTTGCCCAACCCGGGGCTCCGTCC...GTAGCTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CAA 90 bp CGCTGCGGTAGAGGGTCTCATTATCGGGCAGACAGACCGGGAGGACGTTGGGGCCTGCTCTCTTGGCCTTaGCCATACGGCTCTGGGTAC +
Preference number: 5 (lower is better)
Translates to: RCGRGSHYRADRPGGRWGLLSWP*PYGSGY
Trigger: GTACCCAGAGCCGTATGGCAAAGGCCAAGAGAGCAG...GCCCCAACGTCCTCCCGGTCTGTCTGCCCGATAATGAGACCCTCTACCGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGGTCCGTGCTGCTCTCTaGGCCTTTGCCATACGGCTC +
Preference number: 5 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMVRAAL*AFAIRL
Trigger: GAGCCGTATGGCAAAGGCCAAGAGAGCAGCACGGAC...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp CCCCTGCTGCCGCGGCCTGATAATAGGGCTCCTGGCAGTGGTTCTGGACCTTGGTGGAGGTGGGCAGTCTaGTTCTCCGAGGAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: PLLPRPDNRAPGSGSGPWWRWAV*FSEEGC
Trigger: ACAGCCTTCCTCGGAGAACAAGACTGCCCACCTCCA...CCAAGGTCCAGAACCACTGCCAGGAGCCCTATTATCAGGCCGCGGCAGCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR CAA 90 bp TGCCCCTGCTGCCGCGGCCTGATAATAGGGCTCCTGGCAGTGGTTCTGGACCTTGTTCACAGCCACGGTTaGGTAGAGGGCCAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: CPCCRGLIIGLLAVVLDLVHSHG*VEGQEA
Trigger: GGCTTCCTGGCCCTCTACCAAACCGTGGCTGTGAAC...AAGGTCCAGAACCACTGCCAGGAGCCCTATTATCAGGCCGCGGCAGCAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR CAA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGTTGTCTCCAGGTGCGTaGATGGCCTCAGAGCCCCTG +
Preference number: 5 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMLSPGA*MASEPL
Trigger: CAGGGGCTCTGAGGCCATCAACGCACCTGGAGACAA...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp CATTATCGGGCAGACAGACCGGGAGGACGTTGGGGCCCAGGGGGATGCTGTGCTTGGACCTTGGCAGGGTaGTCTCCAGGTGCGTTGATG +
Preference number: 5 (lower is better)
Translates to: HYRADRPGGRWGPGGCCAWTLAG*SPGALM
Trigger: CATCAACGCACCTGGAGACAACCCTGCCAAGGTCCA...AGCACAGCATCCCCCTGGGCCCCAACGTCCTCCCGGTCTGTCTGCCCGATAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp GACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGCTGTGTGCAGACCGGGAGGACGTaGGGGCCCAGGGGGATGCTG +
Preference number: 5 (lower is better)
Translates to: DTVDRVVPQFQHLIYGCVQTGRT*GPRGML
Trigger: CAGCATCCCCCTGGGCCCCAACGTCCTCCCGGTCTG...CACACAGCCATAGATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp CCAGCCCATCTCCATGCCAAACCCACTGACGTAGCCCAACAAGCCGCTGCGGTATTTTGGAGCCAGGCGTaGCAGGCCTCCCTGGGAGCT +
Preference number: 5 (lower is better)
Translates to: PAHLHAKPTDVAQQAAAVFWSQA*QASLGA
Trigger: AGCTCCCAGGGAGGCCTGCAACGCCTGGCTCCAAAA...TACCGCAGCGGCTTGTTGGGCTACGTCAGTGGGTTTGGCATGGAGATGGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCTGGGATGGGGCGGGCTaGCCGGGTGGGGGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLWDGAG*PGGGFS
Trigger: AGAGAAACCCCCACCCGGCAAGCCCGCCCCATCCCA...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS TCA 90 bp CAGGGGAAGTTGCCCAGCTTGGCTCTGGAAGAACCGAGGGTCGTCTaGTTCTGGGCAATGGGGGTGACTGGCCGTCCGCAGACAGGCATA +
Preference number: 5 (lower is better)
Translates to: QGKLPSLALEEPRVV*FWAMGVTGRPQTGI
Trigger: TATGCCTGTCTGCGGACGGCCAGTCACCCCCATTGCCCAGAATCAGACGACCCTCGGTTCTTCCAGAGCCAAGCTGGGCAACTTCCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000266542.9
ENST00000544702.5
ENST00000671752.1
ENST00000672447.1
CDS GCA 90 bp GCAAACTCCTCCCTGAGGATACAAACTCCCTCTGACCAGGGGGCCTaGCCAGAGGGGAGCCTTGCTGACCACAGAACTGGCTTGGATCCG +
Preference number: 5 (lower is better)
Translates to: ANSSLRIQTPSDQGA*PEGSLADHRTGLDP
Trigger: CGGATCCAAGCCAGTTCTGTGGTCAGCAAGGCTCCCCTCTGGGCAGGCCCCCTGGTCAGAGGGAGTTTGTATCCTCAGGGAGGAGTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000266542.9
ENST00000534950.1
ENST00000534969.2
ENST00000537833.6
ENST00000543933.5
ENST00000543941.1
ENST00000544702.5
ENST00000545337.1
ENST00000671752.1
ENST00000672115.1
ENST00000672174.1
ENST00000672447.1
ENST00000672500.1
ENST00000672727.1
ENST00000673022.1
ENST00000673569.1
CDS-3UTR CAA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAAGGACGGAGCCCCGGGTaGGGCAAGCCTGGAGGACTC +
Preference number: 5 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWEGRSPG*GKPGGL
Trigger: GAGTCCTCCAGGCTTGCCCAACCCGGGGCTCCGTCC...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGGGACGGAGCCCCGGGTaGGGCAAGCCTGGAGGACTC +
Preference number: 5 (lower is better)
Translates to: SCISLLSGWGYKCASLHLGRSPG*GKPGGL
Trigger: GAGTCCTCCAGGCTTGCCCAACCCGGGGCTCCGTCC...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGCTGCTCTCTTGGCCTTaGCCATACGGCTCTGGGTAC +
Preference number: 5 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMLLSWP*PYGSGY
Trigger: GTACCCAGAGCCGTATGGCAAAGGCCAAGAGAGCAG...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp CCAGCCCATCTCCATGCCAAACCCACTGACGTAGCCCAACAAGCCGCTGCGGTAGTCCGTGCTGCTCTCTaGGCCTTTGCCATACGGCTC +
Preference number: 5 (lower is better)
Translates to: PAHLHAKPTDVAQQAAAVVRAAL*AFAIRL
Trigger: GAGCCGTATGGCAAAGGCCAAGAGAGCAGCACGGAC...TACCGCAGCGGCTTGTTGGGCTACGTCAGTGGGTTTGGCATGGAGATGGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp CAAGCCGCTGCGGTAGAGGGTCTCATTATCGGGCAGACAGACCGGGAGGACGTTGTCCGTGCTGCTCTCTaGGCCTTTGCCATACGGCTC +
Preference number: 5 (lower is better)
Translates to: QAAAVEGLIIGQTDREDVVRAAL*AFAIRL
Trigger: GAGCCGTATGGCAAAGGCCAAGAGAGCAGCACGGAC...AACGTCCTCCCGGTCTGTCTGCCCGATAATGAGACCCTCTACCGCAGCGGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp CGGGGTGCACAACGACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATGCCCAGAGGGGAGCCTaGCTGACCACAGAACTGGCT +
Preference number: 5 (lower is better)
Translates to: RGAQRHGGQGGSPVSASHAQRGA*LTTELA
Trigger: AGCCAGTTCTGTGGTCAGCAAGGCTCCCCTCTGGGC...ATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGTCGTTGTGCACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp CTACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATCCAGCCCAGAGGGGAGCCTaGCTGACCACAGAACTGGCT +
Preference number: 5 (lower is better)
Translates to: LRLSLNRVACQQGQGWDPAQRGA*LTTELA
Trigger: AGCCAGTTCTGTGGTCAGCAAGGCTCCCCTCTGGGC...TGGATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CAA 90 bp AGCGGTCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGTCAAGGCGAAAGTTGTaGAGATGTACAGGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: SGLWDSASCLGWGGLAGWSRRKL*RCTGFP
Trigger: CGGGAAGCCTGTACATCTCAACAACTTTCGCCTTGA...CCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGACCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS CCA 90 bp ACACTGAAGAACCTCCTCCCCATCCTGTCTGTCTTTCCAGGTCCCTaGGGTTGCACAGGTGAGTGCCCCCACGGTTTGGTAGAGGGCCAG +
Preference number: 5 (lower is better)
Translates to: TLKNLLPILSVFPGP*GCTGECPHGLVEGQ
Trigger: CTGGCCCTCTACCAAACCGTGGGGGCACTCACCTGTGCAACCCCAGGGACCTGGAAAGACAGACAGGATGGGGAGGAGGTTCTTCAGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000543933.5
ENST00000672115.1
CDS-3UTR CAA 90 bp CAGCTACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATGTCCGTGCTGCTCTCTaGGCCTTTGCCATACGGCTC +
Preference number: 5 (lower is better)
Translates to: QLRLSLNRVACQQGQGWDVRAAL*AFAIRL
Trigger: GAGCCGTATGGCAAAGGCCAAGAGAGCAGCACGGAC...ATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CAA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGGACCACAGAACTGGCTaGGATCCGAACCGACGAATG +
Preference number: 5 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMDHRTG*DPNRRM
Trigger: CATTCGTCGGTTCGGATCCAAGCCAGTTCTGTGGTC...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGGCCCAGAGGGGAGCCTaGCTGACCACAGAACTGGCT +
Preference number: 5 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLAQRGA*LTTELA
Trigger: AGCCAGTTCTGTGGTCAGCAAGGCTCCCCTCTGGGC...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp AGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGCAGGCGCCCAGAGGGGAGCCTaGCTGACCACAGAACTGGCT +
Preference number: 5 (lower is better)
Translates to: RHTEGARSTNAWRVSPAGAQRGA*LTTELA
Trigger: AGCCAGTTCTGTGGTCAGCAAGGCTCCCCTCTGGGC...GCCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR CAA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGGCAGACACTGTGCCTTaGCGTCTCATCCCCAACACA +
Preference number: 5 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMADTVP*RLIPNT
Trigger: TGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTGC...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS GCA 90 bp AGCCCTTGTGGAGGTGGGCAGTCTTGTTCTCCGAGGAAGGCTGTGTaGGGAAGGTCAGCCGCAAACTCCTCCCTGAGGATACAAACTCCC +
Preference number: 5 (lower is better)
Translates to: SPCGGGQSCSPRKAV*GRSAANSSLRIQTP
Trigger: GGGAGTTTGTATCCTCAGGGAGGAGTTTGCGGCTGACCTTCCGCACACAGCCTTCCTCGGAGAACAAGACTGCCCACCTCCACAAGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000266542.9
ENST00000534950.1
ENST00000534969.2
ENST00000537833.6
ENST00000543933.5
ENST00000543941.1
ENST00000544702.5
ENST00000545337.1
ENST00000671752.1
ENST00000672115.1
ENST00000672174.1
ENST00000672447.1
ENST00000672500.1
ENST00000672727.1
ENST00000673022.1
ENST00000673569.1
CDS-3UTR CAA 90 bp TACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATCCAGAAGCCCTCTGGAGCCTaGATGTCCGTGCTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: YGCLLIGLLASRGRAGIQKPSGA*MSVLLS
Trigger: AGAGAGCAGCACGGACATCAAGGCTCCAGAGGGCTT...CTGGATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CAA 90 bp GCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCAGCTACGCCCAGAGGGGAGCCTaGCTGACCACAGAACTGGCT +
Preference number: 5 (lower is better)
Translates to: ANTGPVNLHGNNRWGLSYAQRGA*LTTELA
Trigger: AGCCAGTTCTGTGGTCAGCAAGGCTCCCCTCTGGGC...GTAGCTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CAA 90 bp AGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGCAGCCCAGAGGGGAGCCTaGCTGACCACAGAACTGGCT +
Preference number: 5 (lower is better)
Translates to: SRHTEGARSTNAWRVSPAAQRGA*LTTELA
Trigger: AGCCAGTTCTGTGGTCAGCAAGGCTCCCCTCTGGGC...TGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR CAA 90 bp CTACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATCCATGGAGGTGGGCAGTCTaGTTCTCCGAGGAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: LRLSLNRVACQQGQGWDPWRWAV*FSEEGC
Trigger: ACAGCCTTCCTCGGAGAACAAGACTGCCCACCTCCA...TGGATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CAA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCGTTCACAGCCACGGTTaGGTAGAGGGCCAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLVHSHG*VEGQEA
Trigger: GGCTTCCTGGCCCTCTACCAAACCGTGGCTGTGAAC...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp GCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGCAGTTGTCTCCAGGTGCGTaGATGGCCTCAGAGCCCCTG +
Preference number: 5 (lower is better)
Translates to: AGTQKVQDPPTLGGFLQQLSPGA*MASEPL
Trigger: CAGGGGCTCTGAGGCCATCAACGCACCTGGAGACAA...CTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR CAA 90 bp ATAATAGGGCTCCTGGCAGTGGTTCTGGACCTTGGCAGGGTTGTCTCCAGGTGCTTGTCTCCAGGTGCGTaGATGGCCTCAGAGCCCCTG +
Preference number: 5 (lower is better)
Translates to: IIGLLAVVLDLGRVVSRCLSPGA*MASEPL
Trigger: CAGGGGCTCTGAGGCCATCAACGCACCTGGAGACAA...GCACCTGGAGACAACCCTGCCAAGGTCCAGAACCACTGCCAGGAGCCCTATTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR CAA 90 bp ATAGGGCTCCTGGCAGTGGTTCTGGACCTTGGCAGGGTTGTCTCCAGGTGCGTTTGGACCTTGGCAGGGTaGTCTCCAGGTGCGTTGATG +
Preference number: 5 (lower is better)
Translates to: IGLLAVVLDLGRVVSRCVWTLAG*SPGALM
Trigger: CATCAACGCACCTGGAGACAACCCTGCCAAGGTCCA...AACGCACCTGGAGACAACCCTGCCAAGGTCCAGAACCACTGCCAGGAGCCCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR CAA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGGGGAAGTTGCCCAGCTaGGCTCTGGAAGAACCGAGG +
Preference number: 5 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLGKLPS*ALEEPR
Trigger: CCTCGGTTCTTCCAGAGCCAAGCTGGGCAACTTCCC...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp GGAAAGTGTGAGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGAGCAGACCGGGAGGACGTaGGGGCCCAGGGGGATGCTG +
Preference number: 5 (lower is better)
Translates to: GKCELEDTIFAEAGIPREQTGRT*GPRGML
Trigger: CAGCATCCCCCTGGGCCCCAACGTCCTCCCGGTCTG...CTCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp CTCCATGCCAAACCCACTGACGTAGCCCAACAAGCCGCTGCGGTAGAGGGTCTCGCAGACACTGTGCCTTaGCGTCTCATCCCCAACACA +
Preference number: 5 (lower is better)
Translates to: LHAKPTDVAQQAAAVEGLADTVP*RLIPNT
Trigger: TGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTGC...GAGACCCTCTACCGCAGCGGCTTGTTGGGCTACGTCAGTGGGTTTGGCATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp CCCCTGCTGCCGCGGCCTGATAATAGGGCTCCTGGCAGTGGTTCTGGACCTTGGGCTGTTGAAGACAGTTaGGTGGTTCCAGGCATACAC +
Preference number: 5 (lower is better)
Translates to: PLLPRPDNRAPGSGSGPWAVEDS*VVPGIH
Trigger: GTGTATGCCTGGAACCACCAAACTGTCTTCAACAGC...CCAAGGTCCAGAACCACTGCCAGGAGCCCTATTATCAGGCCGCGGCAGCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673569.1
CDS TCA 90 bp CACCAACGCTTGGAGGGTTTCTCCAGCAGGCCTGTGTGTCAGAGCTaGGGACTGAACCTAACGGAGGGCTGGTCTGTGATGGGATCAGCA +
Preference number: 5 (lower is better)
Translates to: HQRLEGFSSRPVCQS*GLNLTEGWSVMGSA
Trigger: TGCTGATCCCATCACAGACCAGCCCTCCGTTAGGTTCAGTCCTCAGCTCTGACACACAGGCCTGCTGGAGAAACCCTCCAAGCGTTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539803.5
ENST00000545280.5
ENST00000671738.1
ENST00000672949.1
CDS CCA 90 bp ACACTGAAGAACCTCCTCCCCATCCTGTCTGTCTTTCCAGGTCCCTaGGGTTGCACAGGTGAGTGCCCCTGTGGCGTAAATGAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: TLKNLLPILSVFPGP*GCTGECPCGVNEER
Trigger: CCTCTCCTCATTTACGCCACAGGGGCACTCACCTGTGCAACCCCAGGGACCTGGAAAGACAGACAGGATGGGGAGGAGGTTCTTCAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGAAGCCCTCTGGAGCCTaGATGTCCGTGCTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLKPSGA*MSVLLS
Trigger: AGAGAGCAGCACGGACATCAAGGCTCCAGAGGGCTT...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp GGAGCTACAGGCAGCCTCGAGTACTTCAGCTCAGTAGTTAGCCAGCCCATCTCCAAGCCCTCTGGAGCCTaGATGTCCGTGCTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: GATGSLEYFSSVVSQPISKPSGA*MSVLLS
Trigger: AGAGAGCAGCACGGACATCAAGGCTCCAGAGGGCTT...GGAGATGGGCTGGCTAACTACTGAGCTGAAGTACTCGAGGCTGCCTGTAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp CGGGGTGCACAACGACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATGACCACAGAACTGGCTaGGATCCGAACCGACGAATG +
Preference number: 5 (lower is better)
Translates to: RGAQRHGGQGGSPVSASHDHRTG*DPNRRM
Trigger: CATTCGTCGGTTCGGATCCAAGCCAGTTCTGTGGTC...ATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGTCGTTGTGCACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp CAGCTACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATGACCACAGAACTGGCTaGGATCCGAACCGACGAATG +
Preference number: 5 (lower is better)
Translates to: QLRLSLNRVACQQGQGWDDHRTG*DPNRRM
Trigger: CATTCGTCGGTTCGGATCCAAGCCAGTTCTGTGGTC...ATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CAA 90 bp TACGGCTGTCTCTTAATAGGGTTGCTTGCCAGCAGGGGCAGGGCTGGGATCCAGGACCACAGAACTGGCTaGGATCCGAACCGACGAATG +
Preference number: 5 (lower is better)
Translates to: YGCLLIGLLASRGRAGIQDHRTG*DPNRRM
Trigger: CATTCGTCGGTTCGGATCCAAGCCAGTTCTGTGGTC...CTGGATCCCAGCCCTGCCCCTGCTGGCAAGCAACCCTATTAAGAGACAGCCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CAA 90 bp GGCCTGATAATAGGGCTCCTGGCAGTGGTTCTGGACCTTGGCAGGGTTGTCTCCGACCACAGAACTGGCTaGGATCCGAACCGACGAATG +
Preference number: 5 (lower is better)
Translates to: GLIIGLLAVVLDLGRVVSDHRTG*DPNRRM
Trigger: CATTCGTCGGTTCGGATCCAAGCCAGTTCTGTGGTC...GGAGACAACCCTGCCAAGGTCCAGAACCACTGCCAGGAGCCCTATTATCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR CAA 90 bp AGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGCATTGTCTCCAGGTGCGTaGATGGCCTCAGAGCCCCTG +
Preference number: 5 (lower is better)
Translates to: SRHTEGARSTNAWRVSPALSPGA*MASEPL
Trigger: CAGGGGCTCTGAGGCCATCAACGCACCTGGAGACAA...TGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR CAA 90 bp CACAACGACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGCGGGAAGTTGCCCAGCTaGGCTCTGGAAGAACCGAGG +
Preference number: 5 (lower is better)
Translates to: HNDTVDRVVPQFQHLIYGGKLPS*ALEEPR
Trigger: CCTCGGTTCTTCCAGAGCCAAGCTGGGCAACTTCCC...GCCATAGATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGTCGTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGGGGTGGGGGTTTCTCTaGCAGTGGCTTGGTGCAACA +
Preference number: 5 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLGWGFL*QWLGAT
Trigger: TGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCC...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp GACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGCTGTGTGGAAATAGGCTCGGAGTaGAAGCTGCTGCCGCGGCCT +
Preference number: 5 (lower is better)
Translates to: DTVDRVVPQFQHLIYGCVEIGSE*KLLPRP
Trigger: AGGCCGCGGCAGCAGCTTCAACTCCGAGCCTATTTC...CACACAGCCATAGATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAAGTCCGTGCTGCTCTCTaGGCCTTTGCCATACGGCTC +
Preference number: 5 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWEVRAAL*AFAIRL
Trigger: GAGCCGTATGGCAAAGGCCAAGAGAGCAGCACGGAC...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp CAGCACACTGGGAAGAGCACAGTCTCTGCAGTCACACACCAGCTGTGGGACTTGGACCACAGAACTGGCTaGGATCCGAACCGACGAATG +
Preference number: 5 (lower is better)
Translates to: QHTGKSTVSAVTHQLWDLDHRTG*DPNRRM
Trigger: CATTCGTCGGTTCGGATCCAAGCCAGTTCTGTGGTC...CAAGTCCCACAGCTGGTGTGTGACTGCAGAGACTGTGCTCTTCCCAGTGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp AATGCCCGTGGCCACCCAGTGATGGGCATGATTGTCCCATACCACATAGACGCTTGGAGGTGGGCAGTCTaGTTCTCCGAGGAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: NARGHPVMGMIVPYHIDAWRWAV*FSEEGC
Trigger: ACAGCCTTCCTCGGAGAACAAGACTGCCCACCTCCA...AGCGTCTATGTGGTATGGGACAATCATGCCCATCACTGGGTGGCCACGGGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGTTGTCTCCAGGTGCGTaGATGGCCTCAGAGCCCCTG +
Preference number: 5 (lower is better)
Translates to: SCISLLSGWGYKCASLHLLSPGA*MASEPL
Trigger: CAGGGGCTCTGAGGCCATCAACGCACCTGGAGACAA...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp ACACAGAACATATTGTCAGAAAACACCTCGGGTCTCTGTCTCTTTTGGAGCCAGCAGACCGGGAGGACGTaGGGGCCCAGGGGGATGCTG +
Preference number: 5 (lower is better)
Translates to: TQNILSENTSGLCLFWSQQTGRT*GPRGML
Trigger: CAGCATCCCCCTGGGCCCCAACGTCCTCCCGGTCTG...CTGGCTCCAAAAGAGACAGAGACCCGAGGTGTTTTCTGACAATATGTTCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp AGCGGTCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGTTCTATAATTGCATCTaGGAGCTGCAGAATAGCTTG +
Preference number: 5 (lower is better)
Translates to: SGLWDSASCLGWGGLAGWFYNCI*ELQNSL
Trigger: CAAGCTATTCTGCAGCTCCAAGATGCAATTATAGAA...CCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGACCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp TCTGTGGGACTCTGCTTCCTGTCTGGGATGGGGCGGGCTTGCCGGGTGGGGGTTTATAAGTGTGCATCATaGCACCTGCCTTTTGGGAAT +
Preference number: 5 (lower is better)
Translates to: SVGLCFLSGMGRACRVGVYKCAS*HLPFGN
Trigger: ATTCCCAAAAGGCAGGTGCAATGATGCACACTTATA...AACCCCCACCCGGCAAGCCCGCCCCATCCCAGACAGGAAGCAGAGTCCCACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp CACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGCAGGCCTGAAGATCCACCAACGCTaGGAGGGTTTCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: HTEGARSTNAWRVSPAGLKIHQR*EGFSSR
Trigger: CCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTT...CAGGCCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539803.5
ENST00000545280.5
ENST00000671738.1
ENST00000672949.1
CDS-3UTR CAA 90 bp TGCTGCCGCGGCCTGATAATAGGGCTCCTGGCAGTGGTTCTGGACCTTGGCAGGTCAAAAATGGTGGGCTaGAACCCTCATGTATTGCCG +
Preference number: 5 (lower is better)
Translates to: CCRGLIIGLLAVVLDLGRSKMVG*NPHVLP
Trigger: CGGCAATACATGAGGGTTCAAGCCCACCATTTTTGA...CCTGCCAAGGTCCAGAACCACTGCCAGGAGCCCTATTATCAGGCCGCGGCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR CAA 90 bp TGCCCCTGCTGCCGCGGCCTGATAATAGGGCTCCTGGCAGTGGTTCTGGACCTTTCAAAAATGGTGGGCTaGAACCCTCATGTATTGCCG +
Preference number: 5 (lower is better)
Translates to: CPCCRGLIIGLLAVVLDLSKMVG*NPHVLP
Trigger: CGGCAATACATGAGGGTTCAAGCCCACCATTTTTGA...AAGGTCCAGAACCACTGCCAGGAGCCCTATTATCAGGCCGCGGCAGCAGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS CCA 90 bp AGCCTTTGGAGTGAGGGCTTCTCCAGAGATATTTCCCCCACACTCTaGGTCCAGGCATCTGGAACTGGACATCTGGGACCTGCGAGAGAA +
Preference number: 5 (lower is better)
Translates to: SLWSEGFSRDISPTL*VQASGTGHLGPARE
Trigger: TTCTCTCGCAGGTCCCAGATGTCCAGTTCCAGATGCCTGGACCCAGAGTGTGGGGGAAATATCTCTGGAGAAGCCCTCACTCCAAAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000266542.9
ENST00000544702.5
ENST00000671752.1
ENST00000672447.1
CDS-3UTR CAA 90 bp ATCTGCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCAGCTGCTCTCTTGGCCTTaGCCATACGGCTCTGGGTAC +
Preference number: 5 (lower is better)
Translates to: ICKHWACKSAWKQPLGAQLLSWP*PYGSGY
Trigger: GTACCCAGAGCCGTATGGCAAAGGCCAAGAGAGCAG...CTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CAA 90 bp ATGATCTGCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTGTCCGTGCTGCTCTCTaGGCCTTTGCCATACGGCTC +
Preference number: 5 (lower is better)
Translates to: MICKHWACKSAWKQPLGAVRAAL*AFAIRL
Trigger: GAGCCGTATGGCAAAGGCCAAGAGAGCAGCACGGAC...AGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CAA 90 bp ATCTGCAAACACTGGGCCTGTAAATCTGCATGGAAACAACCGCTGGGGGCTCAGAAGCCCTCTGGAGCCTaGATGTCCGTGCTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: ICKHWACKSAWKQPLGAQKPSGA*MSVLLS
Trigger: AGAGAGCAGCACGGACATCAAGGCTCCAGAGGGCTT...CTGAGCCCCCAGCGGTTGTTTCCATGCAGATTTACAGGCCCAGTGTTTGCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545337.1
ENST00000672727.1
CDS-3UTR CAA 90 bp GACAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGACCACAGAACTGGCTaGGATCCGAACCGACGAATG +
Preference number: 5 (lower is better)
Translates to: DSRHTEGARSTNAWRVSPDHRTG*DPNRRM
Trigger: CATTCGTCGGTTCGGATCCAAGCCAGTTCTGTGGTC...TGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR CAA 90 bp GGAAAGTGTGAGCTAGAGGATACCATTTTCGCAGAAGCAGGAATTCCCAGGGAGGCCCAGAGGGGAGCCTaGCTGACCACAGAACTGGCT +
Preference number: 5 (lower is better)
Translates to: GKCELEDTIFAEAGIPREAQRGA*LTTELA
Trigger: AGCCAGTTCTGTGGTCAGCAAGGCTCCCCTCTGGGC...CTCCCTGGGAATTCCTGCTTCTGCGAAAATGGTATCCTCTAGCTCACACTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAATGGACCTTGGCAGGGTaGTCTCCAGGTGCGTTGATG +
Preference number: 5 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWEWTLAG*SPGALM
Trigger: CATCAACGCACCTGGAGACAACCCTGCCAAGGTCCA...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGTGGACCTTGGCAGGGTaGTCTCCAGGTGCGTTGATG +
Preference number: 5 (lower is better)
Translates to: SCISLLSGWGYKCASLHLWTLAG*SPGALM
Trigger: CATCAACGCACCTGGAGACAACCCTGCCAAGGTCCA...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp GACACGGTGGACAGGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGCTGTGTGGCAGACACTGTGCCTTaGCGTCTCATCCCCAACACA +
Preference number: 5 (lower is better)
Translates to: DTVDRVVPQFQHLIYGCVADTVP*RLIPNT
Trigger: TGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTGC...CACACAGCCATAGATGAGATGCTGAAACTGGGGAACCACCCTGTCCACCGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAATGGGGTTTCACCATGTaGGCCAGGATGGGCTGGATC +
Preference number: 5 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWEWGFTM*ARMGWI
Trigger: GATCCAGCCCATCCTGGCCAACATGGTGAAACCCCA...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGGCTCAAGCGATCCTCTaGCATCAGCCTCCTGAGTGG +
Preference number: 5 (lower is better)
Translates to: SCISLLSGWGYKCASLHLAQAIL*HQPPEW
Trigger: CCACTCAGGAGGCTGATGCAAGAGGATCGCTTGAGC...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp ACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCAGCAGGCCTGTGTAAGATCCACCAACGCTaGGAGGGTTTCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: TEGARSTNAWRVSPAGLCKIHQR*EGFSSR
Trigger: CCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTT...ACACAGGCCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539803.5
ENST00000545280.5
ENST00000671738.1
ENST00000672949.1
CDS-3UTR CAA 90 bp AGACAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCCCGACGAATGAGATATaGCGCCTGGACAGCCTTTGG +
Preference number: 5 (lower is better)
Translates to: RQQAHRRCKIHQRLEGFSPTNEI*RLDSLW
Trigger: CCAAAGGCTGTCCAGGCGCAATATCTCATTCGTCGG...GGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR CAA 90 bp GTTAGACAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCGACCACAGAACTGGCTaGGATCCGAACCGACGAATG +
Preference number: 5 (lower is better)
Translates to: VRQQAHRRCKIHQRLEGFDHRTG*DPNRRM
Trigger: CATTCGTCGGTTCGGATCCAAGCCAGTTCTGTGGTC...GAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTGTCTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR CAA 90 bp GGGTGGTTCCCCAGTTTCAGCATCTCATCTATGGCTGTGTGGCCCAAGAACACAGACCACAGAACTGGCTaGGATCCGAACCGACGAATG +
Preference number: 5 (lower is better)
Translates to: GWFPSFSISSMAVWPKNTDHRTG*DPNRRM
Trigger: CATTCGTCGGTTCGGATCCAAGCCAGTTCTGTGGTC...TGTGTTCTTGGGCCACACAGCCATAGATGAGATGCTGAAACTGGGGAACCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp CAGGCAGTGACCACATCATCAGTAGTTAGACAGCAGGCACACAGAAGGTGCAAGTGGACCTTGGCAGGGTaGTCTCCAGGTGCGTTGATG +
Preference number: 5 (lower is better)
Translates to: QAVTTSSVVRQQAHRRCKWTLAG*SPGALM
Trigger: CATCAACGCACCTGGAGACAACCCTGCCAAGGTCCA...CTTGCACCTTCTGTGTGCCTGCTGTCTAACTACTGATGATGTGGTCACTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR CAA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTTTTTGGAGCCAGGCGTaGCAGGCCTCCCTGGGAGCT +
Preference number: 5 (lower is better)
Translates to: LSGWGYKCASLHLPFGNIFWSQA*QASLGA
Trigger: AGCTCCCAGGGAGGCCTGCAACGCCTGGCTCCAAAA...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAAGCAGACACTGTGCCTTaGCGTCTCATCCCCAACACA +
Preference number: 5 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWEADTVP*RLIPNT
Trigger: TGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTGC...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp GGCGGGCTTGCCGGGTGGGGGTTTCTCTTGCAGTGGCTTGGTGCAACAGTGATGCTAAAAATTAAAGAGTaGGTCCTCTCAGGTGGAGCA +
Preference number: 5 (lower is better)
Translates to: GGLAGWGFLLQWLGATVMLKIKE*VLSGGA
Trigger: TGCTCCACCTGAGAGGACCAACTCTTTAATTTTTAG...CATCACTGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCCGGCAAGCCCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp CACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTGCCCAGAGGGGAGCCTaGCTGACCACAGAACTGGCT +
Preference number: 5 (lower is better)
Translates to: HCAFASHPQHRTYCQKTPAQRGA*LTTELA
Trigger: AGCCAGTTCTGTGGTCAGCAAGGCTCCCCTCTGGGC...AGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp AAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATTGCCGGTGAGAGTTCACAGCCACGGTTaGGTAGAGGGCCAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: KAWISKMVGLNPHVLPVRVHSHG*VEGQEA
Trigger: GGCTTCCTGGCCCTCTACCAAACCGTGGCTGTGAAC...TCTCACCGGCAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR CAA 90 bp GAACATATTGTCAGAAAACACCTCGGGTCTCTGTCTCTTTTGGAGCCAGGCGTTTTGTCTCCAGGTGCGTaGATGGCCTCAGAGCCCCTG +
Preference number: 5 (lower is better)
Translates to: EHIVRKHLGSLSLLEPGVLSPGA*MASEPL
Trigger: CAGGGGCTCTGAGGCCATCAACGCACCTGGAGACAA...AACGCCTGGCTCCAAAAGAGACAGAGACCCGAGGTGTTTTCTGACAATATGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAACCCCAGGGTCAATTCTaGCCATTCATCACTCCCTTG +
Preference number: 5 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWEPQGQF*PFITPL
Trigger: CAAGGGAGTGATGAATGGCAAGAATTGACCCTGGGG...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp TTAGACAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTGGAGGGTTTCTCCGACGAATGAGATATaGCGCCTGGACAGCCTTTGG +
Preference number: 5 (lower is better)
Translates to: LDSRHTEGARSTNAWRVSPTNEI*RLDSLW
Trigger: CCAAAGGCTGTCCAGGCGCAATATCTCATTCGTCGG...AGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTGTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS-3UTR CAA 90 bp GAACATATTGTCAGAAAACACCTCGGGTCTCTGTCTCTTTTGGAGCCAGGCGTTAAGCCCTCTGGAGCCTaGATGTCCGTGCTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: EHIVRKHLGSLSLLEPGVKPSGA*MSVLLS
Trigger: AGAGAGCAGCACGGACATCAAGGCTCCAGAGGGCTT...AACGCCTGGCTCCAAAAGAGACAGAGACCCGAGGTGTTTTCTGACAATATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTTGGAGGTGGGCAGTCTaGTTCTCCGAGGAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: LSGWGYKCASLHLPFGNIWRWAV*FSEEGC
Trigger: ACAGCCTTCCTCGGAGAACAAGACTGCCCACCTCCA...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp GGCAGACACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAATGGAGGTGGGCAGTCTaGTTCTCCGAGGAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: GRHCAFASHPQHRTYCQKWRWAV*FSEEGC
Trigger: ACAGCCTTCCTCGGAGAACAAGACTGCCCACCTCCA...TTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp ACACAGAACATATTGTCAGAAAACACCTCGGGTCTCTGTCTCTTTTGGAGCCAGGTTCACAGCCACGGTTaGGTAGAGGGCCAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: TQNILSENTSGLCLFWSQVHSHG*VEGQEA
Trigger: GGCTTCCTGGCCCTCTACCAAACCGTGGCTGTGAAC...CTGGCTCCAAAAGAGACAGAGACCCGAGGTGTTTTCTGACAATATGTTCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp CACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTGTTCACAGCCACGGTTaGGTAGAGGGCCAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: HCAFASHPQHRTYCQKTPVHSHG*VEGQEA
Trigger: GGCTTCCTGGCCCTCTACCAAACCGTGGCTGTGAAC...AGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp TTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTCGGGTCTCTTTGTCTCCAGGTGCGTaGATGGCCTCAGAGCCCCTG +
Preference number: 5 (lower is better)
Translates to: FASHPQHRTYCQKTPRVSLSPGA*MASEPL
Trigger: CAGGGGCTCTGAGGCCATCAACGCACCTGGAGACAA...AGAGACCCGAGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp CACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTGGGAAGTTGCCCAGCTaGGCTCTGGAAGAACCGAGG +
Preference number: 5 (lower is better)
Translates to: HCAFASHPQHRTYCQKTPGKLPS*ALEEPR
Trigger: CCTCGGTTCTTCCAGAGCCAAGCTGGGCAACTTCCC...AGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp TTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTCGGGTCTCTGGGTCTCTGTCTCTTTaGGAGCCAGGCGTTGCAGGC +
Preference number: 5 (lower is better)
Translates to: FASHPQHRTYCQKTPRVSGSLSL*EPGVAG
Trigger: GCCTGCAACGCCTGGCTCCAAAAGAGACAGAGACCC...AGAGACCCGAGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTGGGTGGGGGTTTCTCTaGCAGTGGCTTGGTGCAACA +
Preference number: 5 (lower is better)
Translates to: LSGWGYKCASLHLPFGNIGWGFL*QWLGAT
Trigger: TGTTGCACCAAGCCACTGCAAGAGAAACCCCCACCC...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp GTGACCACATCATCAGTAGTTAGACAGCAGGCACACAGAAGGTGCAAGATCCACAAGATCCACCAACGCTaGGAGGGTTTCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: VTTSSVVRQQAHRRCKIHKIHQR*EGFSSR
Trigger: CCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTT...GTGGATCTTGCACCTTCTGTGTGCCTGCTGTCTAACTACTGATGATGTGGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539803.5
ENST00000545280.5
ENST00000671738.1
ENST00000672949.1
CDS-3UTR CAA 90 bp CAGACACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACCTGCTCTCTTGGCCTTaGCCATACGGCTCTGGGTAC +
Preference number: 5 (lower is better)
Translates to: QTLCLCVSSPTQNILSENLLSWP*PYGSGY
Trigger: GTACCCAGAGCCGTATGGCAAAGGCCAAGAGAGCAG...GTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp CACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTTGGACCTTGGCAGGGTaGTCTCCAGGTGCGTTGATG +
Preference number: 5 (lower is better)
Translates to: HCAFASHPQHRTYCQKTPWTLAG*SPGALM
Trigger: CATCAACGCACCTGGAGACAACCCTGCCAAGGTCCA...AGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCAACACAGAACATATaGTCAGAAAACACCTCGGGT +
Preference number: 5 (lower is better)
Translates to: SCISLLSGWGYKCASLHLPTQNI*SENTSG
Trigger: ACCCGAGGTGTTTTCTGACAATATGTTCTGTGTTGG...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTCCCCAGGGTCAATTCTaGCCATTCATCACTCCCTTG +
Preference number: 5 (lower is better)
Translates to: LSGWGYKCASLHLPFGNIPQGQF*PFITPL
Trigger: CAAGGGAGTGATGAATGGCAAGAATTGACCCTGGGG...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCATTCAAGGCGAAAGTaGTTGAGATGTACAGGCTTC +
Preference number: 5 (lower is better)
Translates to: SCISLLSGWGYKCASLHLHSRRK*LRCTGF
Trigger: GAAGCCTGTACATCTCAACAACTTTCGCCTTGAATG...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCTTCTATAATTGCATCTaGGAGCTGCAGAATAGCTTG +
Preference number: 5 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLFYNCI*ELQNSL
Trigger: CAAGCTATTCTGCAGCTCCAAGATGCAATTATAGAA...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp TTGCCGGTGAGATGTAACTTGGTGCTGCTGCTGTTGAAGACAGTTTGGTGGTTCTTGGTGCTGCTGCTGTaGAAGACAGTTTGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: LPVRCNLVLLLLKTVWWFLVLLL*KTVWWF
Trigger: GAACCACCAAACTGTCTTCAACAGCAGCAGCACCAA...GAACCACCAAACTGTCTTCAACAGCAGCAGCACCAAGTTACATCTCACCGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673569.1
CDS-3UTR CAA 90 bp ATGCTTTCATTCAAAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTTGGAGGTGGGCAGTCTaGTTCTCCGAGGAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: MLSFKSVDLKNGGLEPSCWRWAV*FSEEGC
Trigger: ACAGCCTTCCTCGGAGAACAAGACTGCCCACCTCCA...ACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTTTGAATGAAAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR CAA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTTCAAGGCGAAAGTTGTaGAGATGTACAGGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: LSGWGYKCASLHLPFGNISRRKL*RCTGFP
Trigger: CGGGAAGCCTGTACATCTCAACAACTTTCGCCTTGA...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp ATGATAGGGGCACAGGTGGGGTGTCTGCAAGAACTTCAGTCCAGTGCTGGGCTCCCTCAGTTTCCTCATTaGTCACACATAGATAATAAC +
Preference number: 5 (lower is better)
Translates to: MIGAQVGCLQELQSSAGLPQFPH*SHIDNN
Trigger: GTTATTATCTATGTGTGACAAATGAGGAAACTGAGG...GAGCCCAGCACTGGACTGAAGTTCTTGCAGACACCCCACCTGTGCCCCTATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp TCTTGCATCAGCCTCCTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCTAAAAATTAAAGAGTaGGTCCTCTCAGGTGGAGCA +
Preference number: 5 (lower is better)
Translates to: SCISLLSGWGYKCASLHLLKIKE*VLSGGA
Trigger: TGCTCCACCTGAGAGGACCAACTCTTTAATTTTTAG...CAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAGGAGGCTGATGCAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp CGGGTGACACAGCAGGTTAGAGGAGGGTTGAGAAGTATTGCAGCACACTGGGAATATAAGTGTGCATCATaGCACCTGCCTTTTGGGAAT +
Preference number: 5 (lower is better)
Translates to: RVTQQVRGGLRSIAAHWEYKCAS*HLPFGN
Trigger: ATTCCCAAAAGGCAGGTGCAATGATGCACACTTATA...TTCCCAGTGTGCTGCAATACTTCTCAACCCTCCTCTAACCTGCTGTGTCACCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp TTTCATTCAAAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATTGTGGACCTTGGCAGGGTaGTCTCCAGGTGCGTTGATG +
Preference number: 5 (lower is better)
Translates to: FHSKAWISKMVGLNPHVLWTLAG*SPGALM
Trigger: CATCAACGCACCTGGAGACAACCCTGCCAAGGTCCA...CAATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTTTGAATGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR CAA 90 bp GCAGTGACCACATCATCAGTAGTTAGACAGCAGGCACACAGAAGGTGCAAGATCTTCCCAGGCAATAGATaGCAAGAATTCACAGAGCTG +
Preference number: 5 (lower is better)
Translates to: AVTTSSVVRQQAHRRCKIFPGNR*QEFTEL
Trigger: CAGCTCTGTGAATTCTTGCAATCTATTGCCTGGGAA...GATCTTGCACCTTCTGTGTGCCTGCTGTCTAACTACTGATGATGTGGTCACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR CAA 90 bp CTTTCATTCAAAAGCGTGGATCTCAAAAATGGTGGGCTTGAACCCTCATGTATTGACCACAGAACTGGCTaGGATCCGAACCGACGAATG +
Preference number: 5 (lower is better)
Translates to: LSFKSVDLKNGGLEPSCIDHRTG*DPNRRM
Trigger: CATTCGTCGGTTCGGATCCAAGCCAGTTCTGTGGTC...AATACATGAGGGTTCAAGCCCACCATTTTTGAGATCCACGCTTTTGAATGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672500.1
ENST00000673569.1
CDS-3UTR CAA 90 bp CTGAGTGGCTGGGGGTATAAGTGTGCATCATTGCACCTGCCTTTTGGGAATATTCCAACACAGAACATATaGTCAGAAAACACCTCGGGT +
Preference number: 5 (lower is better)
Translates to: LSGWGYKCASLHLPFGNIPTQNI*SENTSG
Trigger: ACCCGAGGTGTTTTCTGACAATATGTTCTGTGTTGG...AATATTCCCAAAAGGCAGGTGCAATGATGCACACTTATACCCCCAGCCACTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266542.9
ENST00000671752.1
CDS-3UTR CAA 90 bp GAGGGTTTTCTGTTTAATGTGCAAGACACTTTCCCAGGCAATAGATTGCAAGAAAAGATCCACCAACGCTaGGAGGGTTTCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: EGFLFNVQDTFPGNRLQEKIHQR*EGFSSR
Trigger: CCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTT...TTCTTGCAATCTATTGCCTGGGAAAGTGTCTTGCACATTAAACAGAAAACCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS-3UTR CAA 90 bp CAGACACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACCCAACACAGAACATATaGTCAGAAAACACCTCGGGT +
Preference number: 5 (lower is better)
Translates to: QTLCLCVSSPTQNILSENPTQNI*SENTSG
Trigger: ACCCGAGGTGTTTTCTGACAATATGTTCTGTGTTGG...GTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp CACTGTGCCTTTGCGTCTCATCCCCAACACAGAACATATTGTCAGAAAACACCTCCAACACAGAACATATaGTCAGAAAACACCTCGGGT +
Preference number: 5 (lower is better)
Translates to: HCAFASHPQHRTYCQKTPPTQNI*SENTSG
Trigger: ACCCGAGGTGTTTTCTGACAATATGTTCTGTGTTGG...AGGTGTTTTCTGACAATATGTTCTGTGTTGGGGATGAGACGCAAAGGCACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS-3UTR CAA 90 bp GAGGGTTTTCTGTTTAATGTGCAAGACACTTTCCCAGGCAATAGATTGCAAGAATTCCCAGGCAATAGATaGCAAGAATTCACAGAGCTG +
Preference number: 5 (lower is better)
Translates to: EGFLFNVQDTFPGNRLQEFPGNR*QEFTEL
Trigger: CAGCTCTGTGAATTCTTGCAATCTATTGCCTGGGAA...TTCTTGCAATCTATTGCCTGGGAAAGTGTCTTGCACATTAAACAGAAAACCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539803.5
ENST00000671738.1
CDS CCA 72 bp TGGGGCCGCGCAGCTATGGCCGGAAGCCTGTGGGTGTaGGAGGAGCGGGGGAGCCGCGCTAGGACTCAGAGG +
Preference number: 6 (lower is better)
Translates to: WGRAAMAGSLWV*EERGSRARTQR
Trigger: CCTCTGAGTCCTAGCGCGGCTCCCCCGCTCCTCCCACACCCACAGGCTTCCGGCCATAGCTGCGCGGCCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000543941.1
ENST00000672174.1
CDS CCA 72 bp CCATACGGCTCTGGGTACCCGGGGGATGTCAGCTGCTaGGGTAGCTCTTGGGCCAAGAGGACGGAGCCCCGG +
Preference number: 6 (lower is better)
Translates to: PYGSGYPGDVSC*GSSWAKRTEPR
Trigger: CCGGGGCTCCGTCCTCTTGGCCCAAGAGCTACCCCAGCAGCTGACATCCCCCGGGTACCCAGAGCCGTATGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000266542.9
ENST00000539927.1
ENST00000543933.5
ENST00000543941.1
ENST00000544702.5
ENST00000545337.1
ENST00000671752.1
ENST00000672115.1
ENST00000672174.1
ENST00000672447.1
ENST00000672727.1
ENST00000672753.1
CDS GCA 72 bp TTGCCATACGGCTCTGGGTACCCGGGGGATGTCAGCTaGTGGGGTAGCTCTTGGGCCAAGAGGACGGAGCCC +
Preference number: 6 (lower is better)
Translates to: LPYGSGYPGDVS*WGSSWAKRTEP
Trigger: GGGCTCCGTCCTCTTGGCCCAAGAGCTACCCCAGCAGCTGACATCCCCCGGGTACCCAGAGCCGTATGGCAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000266542.9
ENST00000539927.1
ENST00000543933.5
ENST00000543941.1
ENST00000544702.5
ENST00000545337.1
ENST00000671752.1
ENST00000672115.1
ENST00000672174.1
ENST00000672447.1
ENST00000672727.1
ENST00000672753.1
CDS CAA 72 bp CTCCCTCTGACCAGGGGGCCTGCCCAGAGGGGAGCCTaGCTGACCACAGAACTGGCTTGGATCCGAACCGAC +
Preference number: 6 (lower is better)
Translates to: LPLTRGPAQRGA*LTTELAWIRTD
Trigger: GTCGGTTCGGATCCAAGCCAGTTCTGTGGTCAGCAAGGCTCCCCTCTGGGCAGGCCCCCTGGTCAGAGGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENST00000266542.9
ENST00000534950.1
ENST00000534969.2
ENST00000537833.6
ENST00000543933.5
ENST00000543941.1
ENST00000544702.5
ENST00000545280.5
ENST00000545337.1
ENST00000671752.1
ENST00000672115.1
ENST00000672174.1
ENST00000672447.1
ENST00000672500.1
ENST00000672727.1
ENST00000672949.1
ENST00000673022.1
ENST00000673569.1
CDS TCA 72 bp TTGCCCAGCTTGGCTCTGGAAGAACCGAGGGTCGTCTaGTTCTGGGCAATGGGGGTGACTGGCCGTCCGCAG +
Preference number: 6 (lower is better)
Translates to: LPSLALEEPRVV*FWAMGVTGRPQ
Trigger: CTGCGGACGGCCAGTCACCCCCATTGCCCAGAATCAGACGACCCTCGGTTCTTCCAGAGCCAAGCTGGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000266542.9
ENST00000534950.1
ENST00000544702.5
ENST00000671752.1
ENST00000672447.1
ENST00000673022.1
CDS TCA 72 bp AAGAACCGAGGGTCGTCTGATTCTGGGCAATGGGGGTaGCTGGCCGTCCGCAGACCACGGTTTGGTAGAGGG +
Preference number: 6 (lower is better)
Translates to: KNRGSSDSGQWG*LAVRRPRFGRG
Trigger: CCCTCTACCAAACCGTGGTCTGCGGACGGCCAGTCACCCCCATTGCCCAGAATCAGACGACCCTCGGTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000534950.1
ENST00000673022.1
CDS CAA 72 bp TCTGGAGCCTTGATGTCCGTGCTGCTCTCTTGGCCTTaGCCATACGGCTCTGGGTACCCGGGGGATGTCAGC +
Preference number: 6 (lower is better)
Translates to: SGALMSVLLSWP*PYGSGYPGDVS
Trigger: GCTGACATCCCCCGGGTACCCAGAGCCGTATGGCAAAGGCCAAGAGAGCAGCACGGACATCAAGGCTCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000266542.9
ENST00000539927.1
ENST00000543933.5
ENST00000543941.1
ENST00000544702.5
ENST00000545337.1
ENST00000671752.1
ENST00000672115.1
ENST00000672174.1
ENST00000672447.1
ENST00000672727.1
ENST00000672753.1
CDS GCA 72 bp GGAGGTGGGCAGTCTTGTTCTCCGAGGAAGGCTGTGTaGGGAAGGTCAGCCGCAAACTCCTCCCTGAGGATA +
Preference number: 6 (lower is better)
Translates to: GGGQSCSPRKAV*GRSAANSSLRI
Trigger: TATCCTCAGGGAGGAGTTTGCGGCTGACCTTCCGCACACAGCCTTCCTCGGAGAACAAGACTGCCCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000266542.9
ENST00000534950.1
ENST00000534969.2
ENST00000537833.6
ENST00000543933.5
ENST00000543941.1
ENST00000544702.5
ENST00000545337.1
ENST00000671752.1
ENST00000672115.1
ENST00000672174.1
ENST00000672447.1
ENST00000672500.1
ENST00000672727.1
ENST00000673022.1
ENST00000673569.1
CDS CCA 72 bp ACCGAGGGTCGTCTGATTCTGGGCAATGGGGGTGACTaGCCGTCCGCAGACAGGCATACACTGAAGAACCTC +
Preference number: 6 (lower is better)
Translates to: TEGRLILGNGGD*PSADRHTLKNL
Trigger: GAGGTTCTTCAGTGTATGCCTGTCTGCGGACGGCCAGTCACCCCCATTGCCCAGAATCAGACGACCCTCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000266542.9
ENST00000544702.5
ENST00000671752.1
ENST00000672447.1
CDS CAA 72 bp CAGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTaGGAGGGTTTCTCCAGCAGGCCTGTGTGTCAGAGC +
Preference number: 6 (lower is better)
Translates to: QQAHRRCKIHQR*EGFSSRPVCQS
Trigger: GCTCTGACACACAGGCCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539803.5
ENST00000545280.5
ENST00000671738.1
ENST00000672949.1
CDS CAA 72 bp TGCCCAGAGGGGAGCCTTGCTGACCACAGAACTGGCTaGGATCCGAACCGACGAATGAGATATTGCGCCTGG +
Preference number: 6 (lower is better)
Translates to: CPEGSLADHRTG*DPNRRMRYCAW
Trigger: CCAGGCGCAATATCTCATTCGTCGGTTCGGATCCAAGCCAGTTCTGTGGTCAGCAAGGCTCCCCTCTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS TCA 72 bp AGCAGCCACCACATTGCGCCTGGACAGCCTTTGGAGTaGGGGCTTCTCCAGAGATATTTCCCCCACACTCTG +
Preference number: 6 (lower is better)
Translates to: SSHHIAPGQPLE*GLLQRYFPHTL
Trigger: CAGAGTGTGGGGGAAATATCTCTGGAGAAGCCCTCACTCCAAAGGCTGTCCAGGCGCAATGTGGTGGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000266542.9
ENST00000543933.5
ENST00000544702.5
ENST00000545337.1
ENST00000671752.1
ENST00000672115.1
ENST00000672447.1
ENST00000672727.1
CDS TCA 72 bp AAGAACCGAGGGTCGTCTGATTCTGGGCAATGGGGGTaGCTGGCCGTCCGCAGACAGGCATACACTGAAGAA +
Preference number: 6 (lower is better)
Translates to: KNRGSSDSGQWG*LAVRRQAYTEE
Trigger: TTCTTCAGTGTATGCCTGTCTGCGGACGGCCAGTCACCCCCATTGCCCAGAATCAGACGACCCTCGGTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000266542.9
ENST00000544702.5
ENST00000671752.1
ENST00000672447.1
CDS CCA 72 bp AGCAGGCACACAGAAGGTGCAAGATCCACCAACGCTTaGAGGGTTTCTCCAGCAGGCCTGTGTGTCAGAGCT +
Preference number: 6 (lower is better)
Translates to: SRHTEGARSTNA*RVSPAGLCVRA
Trigger: AGCTCTGACACACAGGCCTGCTGGAGAAACCCTCCAAGCGTTGGTGGATCTTGCACCTTCTGTGTGCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539803.5
ENST00000545280.5
ENST00000671738.1
ENST00000672949.1
CDS CCA 72 bp CAGAGATATTTCCCCCACACTCTGGGTCCAGGCATCTaGAACTGGACATCTGGGACCTGCGAGAGAACTGGC +
Preference number: 6 (lower is better)
Translates to: QRYFPHTLGPGI*NWTSGTCERTG
Trigger: GCCAGTTCTCTCGCAGGTCCCAGATGTCCAGTTCCAGATGCCTGGACCCAGAGTGTGGGGGAAATATCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544702.5
ENST00000672447.1
CDS CCA 72 bp AGTGAGGGCTTCTCCAGAGATATTTCCCCCACACTCTaGGTCCAGGCATCTGGAACTGGACATCTGGGACCT +
Preference number: 6 (lower is better)
Translates to: SEGFSRDISPTL*VQASGTGHLGP
Trigger: AGGTCCCAGATGTCCAGTTCCAGATGCCTGGACCCAGAGTGTGGGGGAAATATCTCTGGAGAAGCCCTCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000266542.9
ENST00000544702.5
ENST00000545337.1
ENST00000671752.1
ENST00000672447.1
ENST00000672727.1
CDS CCA 72 bp AGAGAAGCAGCCACCACATTGCGCCTGGACAGCCTTTaGAGTGAGGGCTTCTCCAGAGATATTTCCCCCACA +
Preference number: 6 (lower is better)
Translates to: REAATTLRLDSL*SEGFSRDISPT
Trigger: TGTGGGGGAAATATCTCTGGAGAAGCCCTCACTCCAAAGGCTGTCCAGGCGCAATGTGGTGGCTGCTTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000266542.9
ENST00000543933.5
ENST00000544702.5
ENST00000545337.1
ENST00000671752.1
ENST00000672115.1
ENST00000672447.1
ENST00000672727.1
CDS CCA 72 bp GAACCGACGAATGAGATATTGCGCCTGGACAGCCTTTaGAGTGAGGGCTTCTCCAGAGATATTTCCCCCACA +
Preference number: 6 (lower is better)
Translates to: EPTNEILRLDSL*SEGFSRDISPT
Trigger: TGTGGGGGAAATATCTCTGGAGAAGCCCTCACTCCAAAGGCTGTCCAGGCGCAATATCTCATTCGTCGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545280.5
ENST00000672949.1
CDS CCA 72 bp TGGTTCCCCAGTTTCAGCATCTCATCTATGGCTGTGTaGCCCAAGAACACATTCACACTCTGGTTCTTCCTG +
Preference number: 6 (lower is better)
Translates to: WFPSFSISSMAV*PKNTFTLWFFL
Trigger: CAGGAAGAACCAGAGTGTGAATGTGTTCTTGGGCCACACAGCCATAGATGAGATGCTGAAACTGGGGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266542.9
ENST00000534950.1
ENST00000544702.5
ENST00000671752.1
ENST00000672447.1
ENST00000673022.1