RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C1R (Homo sapiens)

Ensembl gene IDs: ENSG00000159403

Ensembl transcript IDs: ENST00000535233.6, ENST00000536053.6, ENST00000536092.1, ENST00000538050.5, ENST00000540394.5, ENST00000540610.5, ENST00000541042.5, ENST00000543362.5, ENST00000543851.1, ENST00000602298.2, ENST00000647956.2, ENST00000648162.1, ENST00000649804.1, ENST00000671729.1, ENST00000671826.1, ENST00000671834.1, ENST00000671919.1, ENST00000671968.1, ENST00000672184.1, ENST00000672248.1, ENST00000672297.1, ENST00000672473.1, ENST00000672909.1, ENST00000673068.1, ENST00000673318.1, ENST00000673372.1

Found 303 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAAAGAAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATaGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCA +
Preference number: 1 (lower is better)
Translates to: RKKGALWVVSGKVHQ*DYRKENFTHGLSAS
Trigger: TGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
3UTR CCA 90 bp ATAACTATATCCTCTGCAATCCTCAGAAGAAAGAAAGGGGCCCTTTaGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAGAG +
Preference number: 1 (lower is better)
Translates to: ITISSAILRRKKGAL*VVSGKVHQWDYRKE
Trigger: CTCTTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTTTCTTCTGAGGATTGCAGAGGATATAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
3UTR-3UTR TCA 90 bp GAGGTGCAGGGTGAGGCCCCGCTCCACCCGGATGCTGTAGTTGCAGCGCAGGTCGCTGGAGATGTAGCCTaGTGCCTCCGTGTACAGCTC +
Preference number: 2 (lower is better)
Translates to: EVQGEAPLHPDAVVAAQVAGDVA*CLRVQL
Trigger: GAGCTGTACACGGAGGCATCAGGCTACATCTCCAGC...GACCTGCGCTGCAACTACAGCATCCGGGTGGAGCGGGGCCTCACCCTGCACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
3UTR-3UTR CCA 90 bp ACCGAGGGTACTCCAGGCTGGAGATGTAGCCTGATGCCTCCGTGTACAGCTCGCACATTCATCAAGGTCTaGAAGGCATTCAGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: TEGTPGWRCSLMPPCTARTFIKV*KAFRKE
Trigger: CTCCTTCCTGAATGCCTTCCAGACCTTGATGAATGT...GCGAGCTGTACACGGAGGCATCAGGCTACATCTCCAGCCTGGAGTACCCTCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
3UTR-3UTR CCA 90 bp TGGAGATGTAGCCTGATGCCTCCGTGTACAGCTCGCTGCTGCACTCAGCCTGGCACATTCATCAAGGTCTaGAAGGCATTCAGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: WRCSLMPPCTARCCTQPGTFIKV*KAFRKE
Trigger: CTCCTTCCTGAATGCCTTCCAGACCTTGATGAATGT...GCCAGGCTGAGTGCAGCAGCGAGCTGTACACGGAGGCATCAGGCTACATCTCCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
3UTR-3UTR TCA 90 bp TGGGGATCCTCCTCCCCTGATTTGCTCCGGGAAGCACATTCATCAAGGTCTGGATTCTGCTGGGAGACCTaGGTAGTGGCTCTGATCTTA +
Preference number: 2 (lower is better)
Translates to: WGSSSPDLLREAHSSRSGFCWET*VVALIL
Trigger: TAAGATCAGAGCCACTACTCAGGTCTCCCAGCAGAA...TCCAGACCTTGATGAATGTGCTTCCCGGAGCAAATCAGGGGAGGAGGATCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
3UTR-3UTR TCA 90 bp CCCCTGATTTGCTCCGGGAAGCACATTCATCAAGGTCTGGAAGGCATTCAGGAATTCTGCTGGGAGACCTaGGTAGTGGCTCTGATCTTA +
Preference number: 2 (lower is better)
Translates to: PLICSGKHIHQGLEGIQEFCWET*VVALIL
Trigger: TAAGATCAGAGCCACTACTCAGGTCTCCCAGCAGAA...TTCCTGAATGCCTTCCAGACCTTGATGAATGTGCTTCCCGGAGCAAATCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
3UTR CAA 90 bp CTATATCCTCTGCAATCCTCAGAAGAAAGAAAGGGGCCCTTTGGGTaGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAGAGAATT +
Preference number: 2 (lower is better)
Translates to: LYPLQSSEERKGPFG*FQVKYINGTTGKRI
Trigger: AATTCTCTTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTTTCTTCTGAGGATTGCAGAGGATATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
3UTR-3UTR CAA 90 bp GAGGTGCAGGGTGAGGCCCCGCTCCACCCGGATGCTGTAGTTGCAGCGCAGGTCTCCTCCTCCCCTGATTaGCTCCGGGAAGCACATTCA +
Preference number: 3 (lower is better)
Translates to: EVQGEAPLHPDAVVAAQVSSSPD*LREAHS
Trigger: TGAATGTGCTTCCCGGAGCAAATCAGGGGAGGAGGA...GACCTGCGCTGCAACTACAGCATCCGGGTGGAGCGGGGCCTCACCCTGCACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
3UTR TCA 72 bp GTAGGACCGAGGGTACTCCAGGCTGGAGATGTAGCCTaGTGCCTCCGTGTACAGCTCGCTGCTGCACTCAGC +
Preference number: 3 (lower is better)
Translates to: VGPRVLQAGDVA*CLRVQLAAALS
Trigger: GCTGAGTGCAGCAGCGAGCTGTACACGGAGGCATCAGGCTACATCTCCAGCCTGGAGTACCCTCGGTCCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
3UTR-3UTR CAA 90 bp CTTCCTGAAGCTCATAGCCTGGACGGCAGGAACAGAAGTAGCCTCCAACGTAGTTCCTCCTCCCCTGATTaGCTCCGGGAAGCACATTCA +
Preference number: 3 (lower is better)
Translates to: LPEAHSLDGRNRSSLQRSSSSPD*LREAHS
Trigger: TGAATGTGCTTCCCGGAGCAAATCAGGGGAGGAGGA...ACTACGTTGGAGGCTACTTCTGTTCCTGCCGTCCAGGCTATGAGCTTCAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
3UTR CCA 72 bp TCCTCTGCAATCCTCAGAAGAAAGAAAGGGGCCCTTTaGGTTGTTTCAGGTAAAGTACATCAATGGGACTAC +
Preference number: 3 (lower is better)
Translates to: SSAILRRKKGAL*VVSGKVHQWDY
Trigger: GTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTTTCTTCTGAGGATTGCAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp GAGGTGCAGGGTGAGGCCCCGCTCCACCCGGATGCTGTAGTTGCAGCGCAGGTCTCTCAAGGCCCGTGTTaGATCCTGGGCTCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: EVQGEAPLHPDAVVAAQVSQGPC*ILGSPD
Trigger: GTCGGGAGAGCCCAGGATTCAACACGGGCCTTGAGA...GACCTGCGCTGCAACTACAGCATCCGGGTGGAGCGGGGCCTCACCCTGCACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR GCA 90 bp TGGAGATGTAGCCTGATGCCTCCGTGTACAGCTCGCTGCTGCACTCAGCCTGGCCCGTGTACAGCTCGCTaGTGCACTCAGCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: WRCSLMPPCTARCCTQPGPCTAR*CTQPGR
Trigger: CCTGCCAGGCTGAGTGCAGCAGCGAGCTGTACACGG...GCCAGGCTGAGTGCAGCAGCGAGCTGTACACGGAGGCATCAGGCTACATCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR GCA 90 bp CTGATGCCTCCGTGTACAGCTCGCTGCTGCACTCAGCCTGGCAGGAATGCCTGTCCCGCTCCACCCGGATaGTGTAGTTGCAGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: LMPPCTARCCTQPGRNACPAPPG*CSCSAG
Trigger: ACCTGCGCTGCAACTACAGCATCCGGGTGGAGCGGG...ACAGGCATTCCTGCCAGGCTGAGTGCAGCAGCGAGCTGTACACGGAGGCATCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR TCA 90 bp CTGATGCCTCCGTGTACAGCTCGCTGCTGCACTCAGCCTGGCAGGAATGCCTGTTCTCAAGGCCCGTGTTaGATCCTGGGCTCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: LMPPCTARCCTQPGRNACSQGPC*ILGSPD
Trigger: GTCGGGAGAGCCCAGGATTCAACACGGGCCTTGAGA...ACAGGCATTCCTGCCAGGCTGAGTGCAGCAGCGAGCTGTACACGGAGGCATCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR GCA 90 bp CTCAGCCTGGCAGGAATGCCTGTCTTCCTGAAGCTCATAGCCTGGACGGCAGGACCCGCTCCACCCGGATaGTGTAGTTGCAGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: LSLAGMPVFLKLIAWTAGPAPPG*CSCSAG
Trigger: ACCTGCGCTGCAACTACAGCATCCGGGTGGAGCGGG...TCCTGCCGTCCAGGCTATGAGCTTCAGGAAGACAGGCATTCCTGCCAGGCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR GCA 90 bp ACCGAGGGTACTCCAGGCTGGAGATGTAGCCTGATGCCTCCGTGTACAGCTCGCTGTACAGCTCGCTGCTaGACTCAGCCTGGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: TEGTPGWRCSLMPPCTARCTARC*TQPGRN
Trigger: ATTCCTGCCAGGCTGAGTGCAGCAGCGAGCTGTACA...GCGAGCTGTACACGGAGGCATCAGGCTACATCTCCAGCCTGGAGTACCCTCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR CCA 90 bp GGTAGGACCGAGGGTACTCCAGGCTGGAGATGTAGCCTGATGCCTCCGTGTACATCTGAGGGATGGGAATaGAGCCTCCTGCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GRTEGTPGWRCSLMPPCTSEGWE*SLLPCR
Trigger: TCTGCAGGGCAGGAGGCTCCATTCCCATCCCTCAGA...TGTACACGGAGGCATCAGGCTACATCTCCAGCCTGGAGTACCCTCGGTCCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR CCA 90 bp AGATGTAGCCTGATGCCTCCGTGTACAGCTCGCTGCTGCACTCAGCCTGGCAGGGAGGGTACTCCAGGCTaGAGATGTAGCCTGATGCCT +
Preference number: 4 (lower is better)
Translates to: RCSLMPPCTARCCTQPGREGTPG*RCSLMP
Trigger: AGGCATCAGGCTACATCTCCAGCCTGGAGTACCCTC...CCTGCCAGGCTGAGTGCAGCAGCGAGCTGTACACGGAGGCATCAGGCTACATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR CCA 90 bp CTGATGCCTCCGTGTACAGCTCGCTGCTGCACTCAGCCTGGCAGGAATGCCTGTATAACTTCTGAGGGATaGGAATGGAGCCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LMPPCTARCCTQPGRNACITSEG*EWSLLP
Trigger: GGGCAGGAGGCTCCATTCCCATCCCTCAGAAGTTAT...ACAGGCATTCCTGCCAGGCTGAGTGCAGCAGCGAGCTGTACACGGAGGCATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR CCA 90 bp GAGGTGCAGGGTGAGGCCCCGCTCCACCCGGATGCTGTAGTTGCAGCGCAGGTCTTGTTTCAAAGTTGTTaGGGTAAGGCTTGGGGAACA +
Preference number: 4 (lower is better)
Translates to: EVQGEAPLHPDAVVAAQVLFQSC*GKAWGT
Trigger: TGTTCCCCAAGCCTTACCCCAACAACTTTGAAACAA...GACCTGCGCTGCAACTACAGCATCCGGGTGGAGCGGGGCCTCACCCTGCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR TCA 90 bp CTTCCTGAAGCTCATAGCCTGGACGGCAGGAACAGAAGTAGCCTCCAACGTAGTGGGATCCTCCTCCCCTaGTTTGCTCCGGGAAGCACA +
Preference number: 4 (lower is better)
Translates to: LPEAHSLDGRNRSSLQRSGILLP*FAPGST
Trigger: TGTGCTTCCCGGAGCAAATCAGGGGAGGAGGATCCC...ACTACGTTGGAGGCTACTTCTGTTCCTGCCGTCCAGGCTATGAGCTTCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR TCA 90 bp CCTGTCTTCCTGAAGCTCATAGCCTGGACGGCAGGAACAGAAGTAGCCTCCAACGCTGGAGATGTAGCCTaGTGCCTCCGTGTACAGCTC +
Preference number: 4 (lower is better)
Translates to: PVFLKLIAWTAGTEVASNAGDVA*CLRVQL
Trigger: GAGCTGTACACGGAGGCATCAGGCTACATCTCCAGC...GTTGGAGGCTACTTCTGTTCCTGCCGTCCAGGCTATGAGCTTCAGGAAGACAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR CCA 90 bp GGAAGGCATTCAGGAAGGAGGGTTAAGCTTCTGCTGGGAGACCTGAGTAGTGGCTCTGAGGGATGGGAATaGAGCCTCCTGCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GRHSGRRVKLLLGDLSSGSEGWE*SLLPCR
Trigger: TCTGCAGGGCAGGAGGCTCCATTCCCATCCCTCAGA...GCCACTACTCAGGTCTCCCAGCAGAAGCTTAACCCTCCTTCCTGAATGCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR CCA 90 bp CCTGGCAGGAATGCCTGTCTTCCTGAAGCTCATAGCCTGGACGGCAGGAACAGAGAGGGTACTCCAGGCTaGAGATGTAGCCTGATGCCT +
Preference number: 4 (lower is better)
Translates to: PGRNACLPEAHSLDGRNREGTPG*RCSLMP
Trigger: AGGCATCAGGCTACATCTCCAGCCTGGAGTACCCTC...TCTGTTCCTGCCGTCCAGGCTATGAGCTTCAGGAAGACAGGCATTCCTGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR TCA 90 bp CTCAGCCTGGCAGGAATGCCTGTCTTCCTGAAGCTCATAGCCTGGACGGCAGGAATCCCGTGGGGACTGTaGTCACAGTGGTTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: LSLAGMPVFLKLIAWTAGIPWGL*SQWLFQ
Trigger: TTGAAACAACCACTGTGATCACAGTCCCCACGGGAT...TCCTGCCGTCCAGGCTATGAGCTTCAGGAAGACAGGCATTCCTGCCAGGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR TCA 90 bp ATAGCCTGGACGGCAGGAACAGAAGTAGCCTCCAACGTAGTTGTGACACAGGTGGCTGGAGATGTAGCCTaGTGCCTCCGTGTACAGCTC +
Preference number: 4 (lower is better)
Translates to: IAWTAGTEVASNVVVTQVAGDVA*CLRVQL
Trigger: GAGCTGTACACGGAGGCATCAGGCTACATCTCCAGC...CACCTGTGTCACAACTACGTTGGAGGCTACTTCTGTTCCTGCCGTCCAGGCTAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR TCA 90 bp AAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAGAGTCCGGGTGGACGCTaGCCCTGCGGATGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: KGPFGLFQVKYINGTTGKSPGGR*PCGWGD
Trigger: ATCACCCCATCCGCAGGGTCAGCGTCCACCCGGACT...CTTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp CCTGTCTTCCTGAAGCTCATAGCCTGGACGGCAGGAACAGAAGTAGCCTCCAACTGTTGGGGTAAGGCTTaGGGAACAGAGGGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: PVFLKLIAWTAGTEVASNCWGKA*GTEGKS
Trigger: TGACTTCCCCTCTGTTCCCCAAGCCTTACCCCAACA...GTTGGAGGCTACTTCTGTTCCTGCCGTCCAGGCTATGAGCTTCAGGAAGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR CCA 90 bp GGAAGGCATTCAGGAAGGAGGGTTAAGCTTCTGCTGGGAGACCTGAGTAGTGGCTCCAGGTCAAACTGCTaGAAGACGAGCTTCACCCTG +
Preference number: 4 (lower is better)
Translates to: GRHSGRRVKLLLGDLSSGSRSNC*KTSFTL
Trigger: CAGGGTGAAGCTCGTCTTCCAGCAGTTTGACCTGGA...GCCACTACTCAGGTCTCCCAGCAGAAGCTTAACCCTCCTTCCTGAATGCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR TCA 90 bp CCTGTCTTCCTGAAGCTCATAGCCTGGACGGCAGGAACAGAAGTAGCCTCCAACATCCCGTGGGGACTGTaGTCACAGTGGTTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: PVFLKLIAWTAGTEVASNIPWGL*SQWLFQ
Trigger: TTGAAACAACCACTGTGATCACAGTCCCCACGGGAT...GTTGGAGGCTACTTCTGTTCCTGCCGTCCAGGCTATGAGCTTCAGGAAGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR TCA 90 bp GGAAGGCATTCAGGAAGGAGGGTTAAGCTTCTGCTGGGAGACCTGAGTAGTGGCAGCCCTTGTAGAACATaGTGGTCCCATTCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: GRHSGRRVKLLLGDLSSGSPCRT*WSHSPR
Trigger: ACGAGGAGAATGGGACCATCATGTTCTACAAGGGCT...GCCACTACTCAGGTCTCCCAGCAGAAGCTTAACCCTCCTTCCTGAATGCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR TCA 90 bp TGGGGATCCTCCTCCCCTGATTTGCTCCGGGAAGCACATTCATCAAGGTCTGGAAGCCCTTGTAGAACATaGTGGTCCCATTCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: WGSSSPDLLREAHSSRSGSPCRT*WSHSPR
Trigger: ACGAGGAGAATGGGACCATCATGTTCTACAAGGGCT...TCCAGACCTTGATGAATGTGCTTCCCGGAGCAAATCAGGGGAGGAGGATCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR TCA 90 bp GGAAGGCATTCAGGAAGGAGGGTTAAGCTTCTGCTGGGAGACCTGAGTAGTGGCTTCTGCTGGGAGACCTaGGTAGTGGCTCTGATCTTA +
Preference number: 4 (lower is better)
Translates to: GRHSGRRVKLLLGDLSSGFCWET*VVALIL
Trigger: TAAGATCAGAGCCACTACTCAGGTCTCCCAGCAGAA...GCCACTACTCAGGTCTCCCAGCAGAAGCTTAACCCTCCTTCCTGAATGCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR GCA 90 bp AAGAAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGCCCGCTCCACCCGGATaGTGTAGTTGCAGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: KKGALWVVSGKVHQWDYRPAPPG*CSCSAG
Trigger: ACCTGCGCTGCAACTACAGCATCCGGGTGGAGCGGG...CCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp AAGAAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGTCCAGGAACTTGAGGTaGAGGGTGAGGCCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: KKGALWVVSGKVHQWDYRSRNLR*RVRPRS
Trigger: GGAGCGGGGCCTCACCCTGCACCTCAAGTTCCTGGA...CCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp AAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAGAGAAGCCATAGCCCCTaGTGCACCCGATGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: KGPFGLFQVKYINGTTGKRSHSP*CTRCPR
Trigger: CCTGGGGCATCGGGTGCAGCAGGGGCTATGGCTTCT...CTTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp CTTCCTGAAGCTCATAGCCTGGACGGCAGGAACAGAAGTAGCCTCCAACGTAGTTGTTGGGGTAAGGCTTaGGGAACAGAGGGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LPEAHSLDGRNRSSLQRSCWGKA*GTEGKS
Trigger: TGACTTCCCCTCTGTTCCCCAAGCCTTACCCCAACA...ACTACGTTGGAGGCTACTTCTGTTCCTGCCGTCCAGGCTATGAGCTTCAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR CCA 90 bp AATGCCTGTCTTCCTGAAGCTCATAGCCTGGACGGCAGGAACAGAAGTAGCCTCTCCAGGTCAAACTGCTaGAAGACGAGCTTCACCCTG +
Preference number: 4 (lower is better)
Translates to: NACLPEAHSLDGRNRSSLSRSNC*KTSFTL
Trigger: CAGGGTGAAGCTCGTCTTCCAGCAGTTTGACCTGGA...GAGGCTACTTCTGTTCCTGCCGTCCAGGCTATGAGCTTCAGGAAGACAGGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR CCA 90 bp GGTAGGACCGAGGGTACTCCAGGCTGGAGATGTAGCCTGATGCCTCCGTGTACAACATTCATCAAGGTCTaGAAGGCATTCAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: GRTEGTPGWRCSLMPPCTTFIKV*KAFRKE
Trigger: CTCCTTCCTGAATGCCTTCCAGACCTTGATGAATGT...TGTACACGGAGGCATCAGGCTACATCTCCAGCCTGGAGTACCCTCGGTCCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR TCA 90 bp AAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAGTCTCAAGGCCCGTGTTaGATCCTGGGCTCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: KGPFGLFQVKYINGTTGKSQGPC*ILGSPD
Trigger: GTCGGGAGAGCCCAGGATTCAACACGGGCCTTGAGA...CTTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp AAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAGGGGATCCTCCTCCCCTaGTTTGCTCCGGGAAGCACA +
Preference number: 4 (lower is better)
Translates to: KGPFGLFQVKYINGTTGKGILLP*FAPGST
Trigger: TGTGCTTCCCGGAGCAAATCAGGGGAGGAGGATCCC...CTTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp CATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAAGTCCGGGTGGACGCTaGCCCTGCGGATGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: HQWDYRKENFTHGLSASVSPGGR*PCGWGD
Trigger: ATCACCCCATCCGCAGGGTCAGCGTCCACCCGGACT...TACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp AAGAAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGGATCCACAGCATTGCTaGTGGTGTCGAGGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: KKGALWVVSGKVHQWDYRDPQHC*WCRGRG
Trigger: CCCCCGACCTCGACACCAGCAGCAATGCTGTGGATC...CCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp AAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAGCTGGGCATGGCACGATaGCACGTGCCATCATCCTGG +
Preference number: 4 (lower is better)
Translates to: KGPFGLFQVKYINGTTGKLGMAR*HVPSSW
Trigger: CCAGGATGATGGCACGTGGCATCGTGCCATGCCCAG...CTTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp AAGAAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGCCTCCGATGATGCGCTaGCTCTGTTCCACGGGGTTC +
Preference number: 4 (lower is better)
Translates to: KKGALWVVSGKVHQWDYRPPMMR*LCSTGF
Trigger: GAACCCCGTGGAACAGAGGCAGCGCATCATCGGAGG...CCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp AAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAGCCTCCGATGATGCGCTaGCTCTGTTCCACGGGGTTC +
Preference number: 4 (lower is better)
Translates to: KGPFGLFQVKYINGTTGKPPMMR*LCSTGF
Trigger: GAACCCCGTGGAACAGAGGCAGCGCATCATCGGAGG...CTTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp CAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTCCCTGCTGCACCCGATaGCCCAGGACACGATGCCCG +
Preference number: 4 (lower is better)
Translates to: QWDYRKENFTHGLSASVIPCCTR*PRTRCP
Trigger: CGGGCATCGTGTCCTGGGGCATCGGGTGCAGCAGGG...AATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp AAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAAGAAGCCATAGCCCCTaGTGCACCCGATGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: KGALWVVSGKVHQWDYRKRSHSP*CTRCPR
Trigger: CCTGGGGCATCGGGTGCAGCAGGGGCTATGGCTTCT...TTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp AATGCCTGTCTTCCTGAAGCTCATAGCCTGGACGGCAGGAACAGAAGTAGCCTCTCCCATTCTCCTCGTTaGAGAAGTCTGTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: NACLPEAHSLDGRNRSSLSHSPR*RSLCGR
Trigger: CCTTCCACACAGACTTCTCCAACGAGGAGAATGGGA...GAGGCTACTTCTGTTCCTGCCGTCCAGGCTATGAGCTTCAGGAAGACAGGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR CCA 90 bp AAGAAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGCCCCCACTATCCCCCTaGCAGGCGTCCTGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: KKGALWVVSGKVHQWDYRPPLSP*QASCFR
Trigger: TCTAAAGCAGGACGCCTGCCAGGGGGATAGTGGGGG...CCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp AAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAATCTCAAGGCCCGTGTTaGATCCTGGGCTCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: KGALWVVSGKVHQWDYRKSQGPC*ILGSPD
Trigger: GTCGGGAGAGCCCAGGATTCAACACGGGCCTTGAGA...TTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp AAGAAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGGCTGCCCACAGTCCTTaGTCTTGCATCTGGGCATGG +
Preference number: 4 (lower is better)
Translates to: KKGALWVVSGKVHQWDYRAAHSP*SCIWAW
Trigger: CCATGCCCAGATGCAAGATCAAGGACTGTGGGCAGC...CCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp AAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAGGCAGATCCACAGCATTaGTGCTGGTGTCGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: KGPFGLFQVKYINGTTGKADPQH*CWCRGR
Trigger: CCGACCTCGACACCAGCAGCAATGCTGTGGATCTGC...CTTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp AAGAAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGTGGCACGATGCCACGTaGCATCATCCTGGCAGACAG +
Preference number: 4 (lower is better)
Translates to: KKGALWVVSGKVHQWDYRWHDAT*HHPGRQ
Trigger: CTGTCTGCCAGGATGATGGCACGTGGCATCGTGCCA...CCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp AAGAAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGGCTCAGACTCCCTGCTaGCAGCTCTGGTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: KKGALWVVSGKVHQWDYRAQTPC*QLWSAS
Trigger: AGATGCAGACCAGAGCTGGCAGCAGGGAGTCTGAGC...CCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp AAGAAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGCCCTGGCAGGCGTCCTaGTTTAGAGATGGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: KKGALWVVSGKVHQWDYRPWQAS*FRDGCP
Trigger: TGGACACCCATCTCTAAAGCAGGACGCCTGCCAGGG...CCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp AAGAAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGTCTGAGGGATGGGAATaGAGCCTCCTGCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: KKGALWVVSGKVHQWDYRSEGWE*SLLPCR
Trigger: TCTGCAGGGCAGGAGGCTCCATTCCCATCCCTCAGA...CCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp ATAGCCTGGACGGCAGGAACAGAAGTAGCCTCCAACGTAGTTGTGACACAGGTGTTGGAGAAGTCTGTGTaGAAGGTCAGCAGCATCTTG +
Preference number: 4 (lower is better)
Translates to: IAWTAGTEVASNVVVTQVLEKSV*KVSSIL
Trigger: CAAGATGCTGCTGACCTTCCACACAGACTTCTCCAA...CACCTGTGTCACAACTACGTTGGAGGCTACTTCTGTTCCTGCCGTCCAGGCTAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR CCA 90 bp CCCCTGATTTGCTCCGGGAAGCACATTCATCAAGGTCTGGAAGGCATTCAGGAATCCCATTCTCCTCGTTaGAGAAGTCTGTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: PLICSGKHIHQGLEGIQESHSPR*RSLCGR
Trigger: CCTTCCACACAGACTTCTCCAACGAGGAGAATGGGA...TTCCTGAATGCCTTCCAGACCTTGATGAATGTGCTTCCCGGAGCAAATCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR CCA 90 bp AAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAAGGACACGATGCCCGTaGCCACCCAGCGATCAGTGT +
Preference number: 4 (lower is better)
Translates to: KGALWVVSGKVHQWDYRKRTRCP*PPSDQC
Trigger: ACACTGATCGCTGGGTGGCCACGGGCATCGTGTCCT...TTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp AAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAACCTGGTTCCCCTCTATaGGCTGGTAGCCTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: KGALWVVSGKVHQWDYRKPGSPL*AGSLAC
Trigger: GCAAGCAAGGCTACCAGCTCATAGAGGGGAACCAGG...TTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp CATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAGATCCACAGCATTGCTaGTGGTGTCGAGGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: HQWDYRKENFTHGLSASVDPQHC*WCRGRG
Trigger: CCCCCGACCTCGACACCAGCAGCAATGCTGTGGATC...TACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp AAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAACAGGTGTACACCCCTTaGTCAGACTCCCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: KGALWVVSGKVHQWDYRKQVYTP*SDSLLP
Trigger: TGGCAGCAGGGAGTCTGAGCAAGGGGTGTACACCTG...TTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp CCCCTGATTTGCTCCGGGAAGCACATTCATCAAGGTCTGGAAGGCATTCAGGAATTGGAGAAGTCTGTGTaGAAGGTCAGCAGCATCTTG +
Preference number: 4 (lower is better)
Translates to: PLICSGKHIHQGLEGIQELEKSV*KVSSIL
Trigger: CAAGATGCTGCTGACCTTCCACACAGACTTCTCCAA...TTCCTGAATGCCTTCCAGACCTTGATGAATGTGCTTCCCGGAGCAAATCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR CCA 90 bp AAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAGGGGCTTCCCACACACTaGCAAGCACCGAGGAATCTT +
Preference number: 4 (lower is better)
Translates to: KGPFGLFQVKYINGTTGKGLPTH*QAPRNL
Trigger: AAGATTCCTCGGTGCTTGCCAGTGTGTGGGAAGCCC...CTTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp AAGAAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGGTTCTCACAGGCCTGTaGATTAGCTACGGGCAGACG +
Preference number: 4 (lower is better)
Translates to: KKGALWVVSGKVHQWDYRVLTGL*ISYGQT
Trigger: CGTCTGCCCGTAGCTAATCCACAGGCCTGTGAGAAC...CCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp CAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTGGGATCCTCCTCCCCTaGTTTGCTCCGGGAAGCACA +
Preference number: 4 (lower is better)
Translates to: QWDYRKENFTHGLSASVIGILLP*FAPGST
Trigger: TGTGCTTCCCGGAGCAAATCAGGGGAGGAGGATCCC...AATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp AAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAATCACGGAACTGGTACTaGGGCTGCAGGTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: KGALWVVSGKVHQWDYRKSRNWY*GCRFWM
Trigger: CATCCAGAACCTGCAGCCTCAGTACCAGTTCCGTGA...TTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp CAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTGCCCGTGGATGTTGGTaGACACCTGCCAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: QWDYRKENFTHGLSASVIARGCW*TPARGS
Trigger: ACTTCCCCTGGCAGGTGTTCACCAACATCCACGGGC...AATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp CATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAGCAGATCCACAGCATTaGTGCTGGTGTCGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: HQWDYRKENFTHGLSASVADPQH*CWCRGR
Trigger: CCGACCTCGACACCAGCAGCAATGCTGTGGATCTGC...TACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp GTACATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCACTTGCTCAGACTCCCTaGTGCCAGCTCTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: VHQWDYRKENFTHGLSASLAQTP*CQLWSA
Trigger: TGCAGACCAGAGCTGGCAGCAGGGAGTCTGAGCAAG...TGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp AAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAACTTCCAAATGCCCTGTaGTGTGCAGGTGTACACCCC +
Preference number: 4 (lower is better)
Translates to: KGALWVVSGKVHQWDYRKLPNAL*CAGVHP
Trigger: GGGGTGTACACCTGCACAGCACAGGGCATTTGGAAG...TTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp CATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTACCCTGGCAGGCGTCCTaGTTTAGAGATGGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: HQWDYRKENFTHGLSASVPWQAS*FRDGCP
Trigger: TGGACACCCATCTCTAAAGCAGGACGCCTGCCAGGG...TACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp AAGAAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGGTTCGGGTCCCTTACTaGAAAAACGCCCCCACTATC +
Preference number: 4 (lower is better)
Translates to: KKGALWVVSGKVHQWDYRVRVPY*KNAPTI
Trigger: GATAGTGGGGGCGTTTTTGCAGTAAGGGACCCGAAC...CCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp TTGGAAAAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGCCCTGCTGCACCCGATaGCCCAGGACACGATGCCCG +
Preference number: 4 (lower is better)
Translates to: LEKVIFNDPMVSKWKRKVPCCTR*PRTRCP
Trigger: CGGGCATCGTGTCCTGGGGCATCGGGTGCAGCAGGG...CACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTTTTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp AAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAGATAACTTCTGAGGGATaGGAATGGAGCCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: KGPFGLFQVKYINGTTGKITSEG*EWSLLP
Trigger: GGGCAGGAGGCTCCATTCCCATCCCTCAGAAGTTAT...CTTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp AAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAGTCCAGGTCAAACTGCTaGAAGACGAGCTTCACCCTG +
Preference number: 4 (lower is better)
Translates to: KGPFGLFQVKYINGTTGKSRSNC*KTSFTL
Trigger: CAGGGTGAAGCTCGTCTTCCAGCAGTTTGACCTGGA...CTTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp AAGAAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGTCCAGGTCAAACTGCTaGAAGACGAGCTTCACCCTG +
Preference number: 4 (lower is better)
Translates to: KKGALWVVSGKVHQWDYRSRSNC*KTSFTL
Trigger: CAGGGTGAAGCTCGTCTTCCAGCAGTTTGACCTGGA...CCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp CAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTGCCCGTGTTGAATCCTaGGCTCTCCCGACAGCGTCT +
Preference number: 4 (lower is better)
Translates to: QWDYRKENFTHGLSASVIARVES*ALPTAS
Trigger: AGACGCTGTCGGGAGAGCCCAGGATTCAACACGGGC...AATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp AAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAGAGGGTACTCCAGGCTaGAGATGTAGCCTGATGCCT +
Preference number: 4 (lower is better)
Translates to: KGALWVVSGKVHQWDYRKEGTPG*RCSLMP
Trigger: AGGCATCAGGCTACATCTCCAGCCTGGAGTACCCTC...TTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp AAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAGAAGGAATGCAGCACCTaGTTCCCCTCTATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KGPFGLFQVKYINGTTGKKECST*FPSMSW
Trigger: CCAGCTCATAGAGGGGAACCAGGTGCTGCATTCCTT...CTTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp GTACATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCACCCCCGACTCATCTGTaGAGAACAGCAGATCCACAG +
Preference number: 4 (lower is better)
Translates to: VHQWDYRKENFTHGLSASPPTHL*RTADPQ
Trigger: CTGTGGATCTGCTGTTCTTCACAGATGAGTCGGGGG...TGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp CATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTACTTTTTGCCCTCCGATaGTGCGCTGCCTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: HQWDYRKENFTHGLSASVLFALR*CAASVP
Trigger: TGGAACAGAGGCAGCGCATCATCGGAGGGCAAAAAG...TACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp CATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAACCCTGCGGATGGGGTaGTTTCCTAGCTTCATGAGC +
Preference number: 4 (lower is better)
Translates to: HQWDYRKENFTHGLSASVTLRMG*FPSFMS
Trigger: GCTCATGAAGCTAGGAAATCACCCCATCCGCAGGGT...TACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp GTACATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCATGTACAGCTCGCTGCTaGACTCAGCCTGGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: VHQWDYRKENFTHGLSASCTARC*TQPGRN
Trigger: ATTCCTGCCAGGCTGAGTGCAGCAGCGAGCTGTACA...TGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp CAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTGGCAGGTTTCGGGGCTaGCCACAGTCCTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: QWDYRKENFTHGLSASVIGRFRG*PQSLIL
Trigger: CAAGATCAAGGACTGTGGGCAGCCCCGAAACCTGCC...AATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp CAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTGCTCAGACTCCCTGCTaGCAGCTCTGGTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: QWDYRKENFTHGLSASVIAQTPC*QLWSAS
Trigger: AGATGCAGACCAGAGCTGGCAGCAGGGAGTCTGAGC...AATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp CATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTACCCATCTTGGCTTTTTaGCCTCCGATGATGCGCTGC +
Preference number: 4 (lower is better)
Translates to: HQWDYRKENFTHGLSASVPILAF*PPMMRC
Trigger: GCAGCGCATCATCGGAGGGCAAAAAGCCAAGATGGG...TACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp AAGAAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGCATCCAAAGAGGCGTTaGTTTGCGCTTCGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: KKGALWVVSGKVHQWDYRHPKRR*FALRVP
Trigger: AGGAACACGAAGCGCAAAGCAACGCCTCTTTGGATG...CCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp CCCCTGATTTGCTCCGGGAAGCACATTCATCAAGGTCTGGAAGGCATTCAGGAATTGTTTCAAAGTTGTTaGGGTAAGGCTTGGGGAACA +
Preference number: 4 (lower is better)
Translates to: PLICSGKHIHQGLEGIQELFQSC*GKAWGT
Trigger: TGTTCCCCAAGCCTTACCCCAACAACTTTGAAACAA...TTCCTGAATGCCTTCCAGACCTTGATGAATGTGCTTCCCGGAGCAAATCAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR CCA 90 bp AAGAAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGTCCCATTCTCCTCGTTaGAGAAGTCTGTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: KKGALWVVSGKVHQWDYRSHSPR*RSLCGR
Trigger: CCTTCCACACAGACTTCTCCAACGAGGAGAATGGGA...CCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp GTACATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGAGGGTACTCCAGGCTaGAGATGTAGCCTGATGCCT +
Preference number: 4 (lower is better)
Translates to: VHQWDYRKENFTHGLSASEGTPG*RCSLMP
Trigger: AGGCATCAGGCTACATCTCCAGCCTGGAGTACCCTC...TGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp AAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAAAGGAATGCAGCACCTaGTTCCCCTCTATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KGALWVVSGKVHQWDYRKKECST*FPSMSW
Trigger: CCAGCTCATAGAGGGGAACCAGGTGCTGCATTCCTT...TTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp AAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAACACGTGCCATCATCCTaGCAGACAGCTGTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: KGALWVVSGKVHQWDYRKHVPSS*QTAVKE
Trigger: TTCCTTCACAGCTGTCTGCCAGGATGATGGCACGTG...TTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp GTACATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCATCTTGCATCTGGGCATaGCACGATGCCACGTGCCAT +
Preference number: 4 (lower is better)
Translates to: VHQWDYRKENFTHGLSASSCIWA*HDATCH
Trigger: ATGGCACGTGGCATCGTGCCATGCCCAGATGCAAGA...TGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp GTACATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGGGCTTCCCACACACTaGCAAGCACCGAGGAATCTT +
Preference number: 4 (lower is better)
Translates to: VHQWDYRKENFTHGLSASGLPTH*QAPRNL
Trigger: AAGATTCCTCGGTGCTTGCCAGTGTGTGGGAAGCCC...TGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp AAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAAGCCCTTGTAGAACATaGTGGTCCCATTCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: KGALWVVSGKVHQWDYRKSPCRT*WSHSPR
Trigger: ACGAGGAGAATGGGACCATCATGTTCTACAAGGGCT...TTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp CAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTCCCCCGACTCATCTGTaGAGAACAGCAGATCCACAG +
Preference number: 4 (lower is better)
Translates to: QWDYRKENFTHGLSASVIPPTHL*RTADPQ
Trigger: CTGTGGATCTGCTGTTCTTCACAGATGAGTCGGGGG...AATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp TTGGAAAAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGCCGTGTACAGCTCGCTaGTGCACTCAGCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LEKVIFNDPMVSKWKRKVPCTAR*CTQPGR
Trigger: CCTGCCAGGCTGAGTGCAGCAGCGAGCTGTACACGG...CACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTTTTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp TTGGAAAAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGCCCGCTCCACCCGGATaGTGTAGTTGCAGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: LEKVIFNDPMVSKWKRKVPAPPG*CSCSAG
Trigger: ACCTGCGCTGCAACTACAGCATCCGGGTGGAGCGGG...CACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTTTTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp AAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGACAACTTCCAGGAACTTGAGGTaGAGGGTGAGGCCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: KVIFNDPMVSKWKRKVTTSRNLR*RVRPRS
Trigger: GGAGCGGGGCCTCACCCTGCACCTCAAGTTCCTGGA...AGTTGTCACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp GTACATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAACAGCTGTGAAGGAATaGAGCACCTGGTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: VHQWDYRKENFTHGLSASTAVKE*STWFPS
Trigger: AGAGGGGAACCAGGTGCTGCATTCCTTCACAGCTGT...TGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp CATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAACAGCTGTGAAGGAATaGAGCACCTGGTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: HQWDYRKENFTHGLSASVTAVKE*STWFPS
Trigger: AGAGGGGAACCAGGTGCTGCATTCCTTCACAGCTGT...TACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp AAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAACATCCAAAGAGGCGTTaGTTTGCGCTTCGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: KGALWVVSGKVHQWDYRKHPKRR*FALRVP
Trigger: AGGAACACGAAGCGCAAAGCAACGCCTCTTTGGATG...TTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp GTACATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTTCGGGTCCCTTACTaGAAAAACGCCCCCACTATC +
Preference number: 4 (lower is better)
Translates to: VHQWDYRKENFTHGLSASVRVPY*KNAPTI
Trigger: GATAGTGGGGGCGTTTTTGCAGTAAGGGACCCGAAC...TGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp CTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTAATAGAAGCCATAGCCCCTGCTaGACCCGATGCCCCAGGACA +
Preference number: 4 (lower is better)
Translates to: LQEREFHTRSFCISNFNRSHSPC*TRCPRT
Trigger: TGTCCTGGGGCATCGGGTGCAGCAGGGGCTATGGCT...TCTATTAAAATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp AAGAAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGTTGGAGAAGTCTGTGTaGAAGGTCAGCAGCATCTTG +
Preference number: 4 (lower is better)
Translates to: KKGALWVVSGKVHQWDYRLEKSV*KVSSIL
Trigger: CAAGATGCTGCTGACCTTCCACACAGACTTCTCCAA...CCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp CATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTACACGTGCCATCATCCTaGCAGACAGCTGTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: HQWDYRKENFTHGLSASVHVPSS*QTAVKE
Trigger: TTCCTTCACAGCTGTCTGCCAGGATGATGGCACGTG...TACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp GTACATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGAACCTAGTGAATTCTaGGCTCAGTCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VHQWDYRKENFTHGLSASEPSEF*AQSSSS
Trigger: GGAGGAGGAGGACTGAGCCCAGAATTCACTAGGTTC...TGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp GTACATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAATCCCGTGGGGACTGTaGTCACAGTGGTTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: VHQWDYRKENFTHGLSASIPWGL*SQWLFQ
Trigger: TTGAAACAACCACTGTGATCACAGTCCCCACGGGAT...TGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp ATTCATCAAGGTCTGGAAGGCATTCAGGAAGGAGGGTTAAGCTTCTGCTGGGAGTATCAGCAGAGATCTTaGCATAATCATAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: IHQGLEGIQEGGLSFCWEYQQRS*HNHRSS
Trigger: GCTGCTTCTATGATTATGTCAAGATCTCTGCTGATA...CTCCCAGCAGAAGCTTAACCCTCCTTCCTGAATGCCTTCCAGACCTTGATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR TCA 90 bp CTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTAATAGAGCCCGTGGATGTTGGTaGACACCTGCCAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LQEREFHTRSFCISNFNRARGCW*TPARGS
Trigger: ACTTCCCCTGGCAGGTGTTCACCAACATCCACGGGC...TCTATTAAAATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp TTGGAAAAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGCTGGGCATGGCACGATaGCACGTGCCATCATCCTGG +
Preference number: 4 (lower is better)
Translates to: LEKVIFNDPMVSKWKRKVLGMAR*HVPSSW
Trigger: CCAGGATGATGGCACGTGGCATCGTGCCATGCCCAG...CACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTTTTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp CAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTATGTTGGTGAACACCTaGCAGGGGAAGTTGCCCATC +
Preference number: 4 (lower is better)
Translates to: QWDYRKENFTHGLSASVIMLVNT*QGKLPI
Trigger: GATGGGCAACTTCCCCTGGCAGGTGTTCACCAACAT...AATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp CAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTGTTGGGGTAAGGCTTaGGGAACAGAGGGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: QWDYRKENFTHGLSASVICWGKA*GTEGKS
Trigger: TGACTTCCCCTCTGTTCCCCAAGCCTTACCCCAACA...AATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp TTGGAAAAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGGCCCGTGTTGAATCCTaGGCTCTCCCGACAGCGTCT +
Preference number: 4 (lower is better)
Translates to: LEKVIFNDPMVSKWKRKVARVES*ALPTAS
Trigger: AGACGCTGTCGGGAGAGCCCAGGATTCAACACGGGC...CACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTTTTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp AAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAATCACTCCCATTGTGGTaGTGTAACGGAAGTCACCAT +
Preference number: 4 (lower is better)
Translates to: KGALWVVSGKVHQWDYRKSLPLW*CNGSHH
Trigger: ATGGTGACTTCCGTTACACCACCACAATGGGAGTGA...TTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp GTACATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCACCCTGCTGCCAGCTCTaGTCTGCATCTTGTAATATG +
Preference number: 4 (lower is better)
Translates to: VHQWDYRKENFTHGLSASPCCQL*SASCNM
Trigger: CATATTACAAGATGCAGACCAGAGCTGGCAGCAGGG...TGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp CTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTAATAGACCCCCACTATCCCCCTaGCAGGCGTCCTGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: LQEREFHTRSFCISNFNRPPLSP*QASCFR
Trigger: TCTAAAGCAGGACGCCTGCCAGGGGGATAGTGGGGG...TCTATTAAAATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp AAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGACAACTAGGACACGATGCCCGTaGCCACCCAGCGATCAGTGT +
Preference number: 4 (lower is better)
Translates to: KVIFNDPMVSKWKRKVTTRTRCP*PPSDQC
Trigger: ACACTGATCGCTGGGTGGCCACGGGCATCGTGTCCT...AGTTGTCACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
3UTR CAA 72 bp CTGCAATCCTCAGAAGAAAGAAAGGGGCCCTTTGGGTaGTTTCAGGTAAAGTACATCAATGGGACTACAGGA +
Preference number: 4 (lower is better)
Translates to: LQSSEERKGPFG*FQVKYINGTTG
Trigger: TCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTTTCTTCTGAGGATTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp TTGGAAAAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGGCTGGAGATGTAGCCTaGTGCCTCCGTGTACAGCTC +
Preference number: 4 (lower is better)
Translates to: LEKVIFNDPMVSKWKRKVAGDVA*CLRVQL
Trigger: GAGCTGTACACGGAGGCATCAGGCTACATCTCCAGC...CACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTTTTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp CTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTAATAGAGCTGGAGATGTAGCCTaGTGCCTCCGTGTACAGCTC +
Preference number: 4 (lower is better)
Translates to: LQEREFHTRSFCISNFNRAGDVA*CLRVQL
Trigger: GAGCTGTACACGGAGGCATCAGGCTACATCTCCAGC...TCTATTAAAATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp AAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGACAACTCCTGGTTCCCCTCTATaGGCTGGTAGCCTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: KVIFNDPMVSKWKRKVTTPGSPL*AGSLAC
Trigger: GCAAGCAAGGCTACCAGCTCATAGAGGGGAACCAGG...AGTTGTCACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp CTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTAATAGAGCTGCCCACAGTCCTTaGTCTTGCATCTGGGCATGG +
Preference number: 4 (lower is better)
Translates to: LQEREFHTRSFCISNFNRAAHSP*SCIWAW
Trigger: CCATGCCCAGATGCAAGATCAAGGACTGTGGGCAGC...TCTATTAAAATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp AAGAAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGGATTTCCTAGCTTCATaGGCTCTTCCACATTTGTGT +
Preference number: 4 (lower is better)
Translates to: KKGALWVVSGKVHQWDYRDFLAS*ALPHLC
Trigger: ACACAAATGTGGAAGAGCTCATGAAGCTAGGAAATC...CCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp CTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTAATAGATGGCACGATGCCACGTaGCATCATCCTGGCAGACAG +
Preference number: 4 (lower is better)
Translates to: LQEREFHTRSFCISNFNRWHDAT*HHPGRQ
Trigger: CTGTCTGCCAGGATGATGGCACGTGGCATCGTGCCA...TCTATTAAAATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp CTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTAATAGAGGCAGGTTTCGGGGCTaGCCACAGTCCTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: LQEREFHTRSFCISNFNRGRFRG*PQSLIL
Trigger: CAAGATCAAGGACTGTGGGCAGCCCCGAAACCTGCC...TCTATTAAAATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp TTGGAAAAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGCTTGCTCAGACTCCCTaGTGCCAGCTCTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LEKVIFNDPMVSKWKRKVLAQTP*CQLWSA
Trigger: TGCAGACCAGAGCTGGCAGCAGGGAGTCTGAGCAAG...CACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTTTTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp AAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGACAACTCAGGTGTACACCCCTTaGTCAGACTCCCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: KVIFNDPMVSKWKRKVTTQVYTP*SDSLLP
Trigger: TGGCAGCAGGGAGTCTGAGCAAGGGGTGTACACCTG...AGTTGTCACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp AAGAAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGCAGTGTACTTGCTGGTaGTCATCAATATCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: KKGALWVVSGKVHQWDYRQCTCW*SSISKG
Trigger: GCCTTTTGATATTGATGACCACCAGCAAGTACACTG...CCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp CAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTCCCTGCTGCCAGCTCTaGTCTGCATCTTGTAATATG +
Preference number: 4 (lower is better)
Translates to: QWDYRKENFTHGLSASVIPCCQL*SASCNM
Trigger: CATATTACAAGATGCAGACCAGAGCTGGCAGCAGGG...AATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp AAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAATCTTCCACATTTGTGTaGCCCAGGAACACATCCAAA +
Preference number: 4 (lower is better)
Translates to: KGALWVVSGKVHQWDYRKSSTFV*PRNTSK
Trigger: TTTGGATGTGTTCCTGGGCCACACAAATGTGGAAGA...TTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp CTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTAATAGATCACGGAACTGGTACTaGGGCTGCAGGTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: LQEREFHTRSFCISNFNRSRNWY*GCRFWM
Trigger: CATCCAGAACCTGCAGCCTCAGTACCAGTTCCGTGA...TCTATTAAAATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp AAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGACAACTCTTTTTGCCCTCCGATaGTGCGCTGCCTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: KVIFNDPMVSKWKRKVTTLFALR*CAASVP
Trigger: TGGAACAGAGGCAGCGCATCATCGGAGGGCAAAAAG...AGTTGTCACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp CTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTAATAGAACCCTGCGGATGGGGTaGTTTCCTAGCTTCATGAGC +
Preference number: 4 (lower is better)
Translates to: LQEREFHTRSFCISNFNRTLRMG*FPSFMS
Trigger: GCTCATGAAGCTAGGAAATCACCCCATCCGCAGGGT...TCTATTAAAATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp CTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTAATAGAGGTTGGGACCCAGGGTaGCACTATTTTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LQEREFHTRSFCISNFNRGWDPG*HYFPAP
Trigger: TGGAGCTGGAAAATAGTGTCACCCTGGGTCCCAACC...TCTATTAAAATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp TTGGAAAAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGGGTTGGGACCCAGGGTaGCACTATTTTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LEKVIFNDPMVSKWKRKVGWDPG*HYFPAP
Trigger: TGGAGCTGGAAAATAGTGTCACCCTGGGTCCCAACC...CACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTTTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp AAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGACAACTTGTACAGCTCGCTGCTaGACTCAGCCTGGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: KVIFNDPMVSKWKRKVTTCTARC*TQPGRN
Trigger: ATTCCTGCCAGGCTGAGTGCAGCAGCGAGCTGTACA...AGTTGTCACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp CTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTAATAGACTTCCAAATGCCCTGTaGTGTGCAGGTGTACACCCC +
Preference number: 4 (lower is better)
Translates to: LQEREFHTRSFCISNFNRLPNAL*CAGVHP
Trigger: GGGGTGTACACCTGCACAGCACAGGGCATTTGGAAG...TCTATTAAAATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp CTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTAATAGACCCATCTTGGCTTTTTaGCCTCCGATGATGCGCTGC +
Preference number: 4 (lower is better)
Translates to: LQEREFHTRSFCISNFNRPILAF*PPMMRC
Trigger: GCAGCGCATCATCGGAGGGCAAAAAGCCAAGATGGG...TCTATTAAAATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp CAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTGGAGAAGTCTGTGTaGAAGGTCAGCAGCATCTTG +
Preference number: 4 (lower is better)
Translates to: QWDYRKENFTHGLSASVILEKSV*KVSSIL
Trigger: CAAGATGCTGCTGACCTTCCACACAGACTTCTCCAA...AATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp CATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTACAATGTTCTTCCCGTTaGCATAGATCTGTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: HQWDYRKENFTHGLSASVQCSSR*HRSVAG
Trigger: ACCAGCTACAGATCTATGCCAACGGGAAGAACATTG...TACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp TTGGAAAAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGTCTTGCATCTGGGCATaGCACGATGCCACGTGCCAT +
Preference number: 4 (lower is better)
Translates to: LEKVIFNDPMVSKWKRKVSCIWA*HDATCH
Trigger: ATGGCACGTGGCATCGTGCCATGCCCAGATGCAAGA...CACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTTTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp CAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTCACTCCCATTGTGGTaGTGTAACGGAAGTCACCAT +
Preference number: 4 (lower is better)
Translates to: QWDYRKENFTHGLSASVISLPLW*CNGSHH
Trigger: ATGGTGACTTCCGTTACACCACCACAATGGGAGTGA...AATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp CAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTGTTCACTCCCATTGTaGTGGTGTAACGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: QWDYRKENFTHGLSASVICSLPL*WCNGSH
Trigger: GTGACTTCCGTTACACCACCACAATGGGAGTGAACA...AATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp CATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTATCTTCCACATTTGTGTaGCCCAGGAACACATCCAAA +
Preference number: 4 (lower is better)
Translates to: HQWDYRKENFTHGLSASVSSTFV*PRNTSK
Trigger: TTTGGATGTGTTCCTGGGCCACACAAATGTGGAAGA...TACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp CTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTAATAGAGTTCTCACAGGCCTGTaGATTAGCTACGGGCAGACG +
Preference number: 4 (lower is better)
Translates to: LQEREFHTRSFCISNFNRVLTGL*ISYGQT
Trigger: CGTCTGCCCGTAGCTAATCCACAGGCCTGTGAGAAC...TCTATTAAAATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp AAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAAAGAAAGGGGCCCTTTaGGTTGTTTCAGGTAAAGTA +
Preference number: 4 (lower is better)
Translates to: KGALWVVSGKVHQWDYRKKKGAL*VVSGKV
Trigger: TACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTT...TTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp GTACATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGATTTCCTAGCTTCATaGGCTCTTCCACATTTGTGT +
Preference number: 4 (lower is better)
Translates to: VHQWDYRKENFTHGLSASDFLAS*ALPHLC
Trigger: ACACAAATGTGGAAGAGCTCATGAAGCTAGGAAATC...TGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp AAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAAGTGGAAGAGGAAAGTaGCAACTAGAGATTGATAAC +
Preference number: 4 (lower is better)
Translates to: KGALWVVSGKVHQWDYRKSGRGK*QLEIDN
Trigger: GTTATCAATCTCTAGTTGTCACTTTCCTCTTCCACT...TTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp AAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGACAACTAAATGCCCTGTGCTGTaGAGGTGTACACCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: KVIFNDPMVSKWKRKVTTKCPVL*RCTPLA
Trigger: AGCAAGGGGTGTACACCTGCACAGCACAGGGCATTT...AGTTGTCACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp TTGGAAAAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGAAATGCCCTGTGCTGTaGAGGTGTACACCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LEKVIFNDPMVSKWKRKVKCPVL*RCTPLA
Trigger: AGCAAGGGGTGTACACCTGCACAGCACAGGGCATTT...CACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTTTTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR GCA 90 bp CTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTAATAGAATGTTGGTGAACACCTaGCAGGGGAAGTTGCCCATC +
Preference number: 4 (lower is better)
Translates to: LQEREFHTRSFCISNFNRMLVNT*QGKLPI
Trigger: GATGGGCAACTTCCCCTGGCAGGTGTTCACCAACAT...TCTATTAAAATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp AAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGACAACTTGTTGGGGTAAGGCTTaGGGAACAGAGGGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: KVIFNDPMVSKWKRKVTTCWGKA*GTEGKS
Trigger: TGACTTCCCCTCTGTTCCCCAAGCCTTACCCCAACA...AGTTGTCACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp CATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTATTGTTTCAAAGTTGTTaGGGTAAGGCTTGGGGAACA +
Preference number: 4 (lower is better)
Translates to: HQWDYRKENFTHGLSASVLFQSC*GKAWGT
Trigger: TGTTCCCCAAGCCTTACCCCAACAACTTTGAAACAA...TACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp CATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTACAGTGTACTTGCTGGTaGTCATCAATATCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: HQWDYRKENFTHGLSASVQCTCW*SSISKG
Trigger: GCCTTTTGATATTGATGACCACCAGCAAGTACACTG...TACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp GTACATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGGGCAGTGTACTTGCTaGTGGTCATCAATATCAAAA +
Preference number: 4 (lower is better)
Translates to: VHQWDYRKENFTHGLSASGQCTC*WSSISK
Trigger: TTTTGATATTGATGACCACCAGCAAGTACACTGCCC...TGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp AAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGACAACTGAACCTAGTGAATTCTaGGCTCAGTCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KVIFNDPMVSKWKRKVTTEPSEF*AQSSSS
Trigger: GGAGGAGGAGGACTGAGCCCAGAATTCACTAGGTTC...AGTTGTCACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp CTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTAATAGAATCCCGTGGGGACTGTaGTCACAGTGGTTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: LQEREFHTRSFCISNFNRIPWGL*SQWLFQ
Trigger: TTGAAACAACCACTGTGATCACAGTCCCCACGGGAT...TCTATTAAAATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp CTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTAATAGAAGCCCTTGTAGAACATaGTGGTCCCATTCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: LQEREFHTRSFCISNFNRSPCRT*WSHSPR
Trigger: ACGAGGAGAATGGGACCATCATGTTCTACAAGGGCT...TCTATTAAAATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp CTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTAATAGAGCAGACGGACAAACCTaGGGTCATGAGCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: LQEREFHTRSFCISNFNRADGQT*GHEQSS
Trigger: AGAAGATTGCTCATGACCTCAGGTTTGTCCGTCTGC...TCTATTAAAATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp GTACATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAAGTGGAAGAGGAAAGTaGCAACTAGAGATTGATAAC +
Preference number: 4 (lower is better)
Translates to: VHQWDYRKENFTHGLSASSGRGK*QLEIDN
Trigger: GTTATCAATCTCTAGTTGTCACTTTCCTCTTCCACT...TGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp CAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTGTTTCAAAGTTGTTaGGGTAAGGCTTGGGGAACA +
Preference number: 4 (lower is better)
Translates to: QWDYRKENFTHGLSASVILFQSC*GKAWGT
Trigger: TGTTCCCCAAGCCTTACCCCAACAACTTTGAAACAA...AATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp CAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTGGGCAGTGTACTTGCTaGTGGTCATCAATATCAAAA +
Preference number: 4 (lower is better)
Translates to: QWDYRKENFTHGLSASVIGQCTC*WSSISK
Trigger: TTTTGATATTGATGACCACCAGCAAGTACACTGCCC...AATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp AAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGACAACTACAAACCTGAGGTCATaGGCAATCTTCTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: KVIFNDPMVSKWKRKVTTTNLRS*AIFSSM
Trigger: CATGGAGGAGAAGATTGCTCATGACCTCAGGTTTGT...AGTTGTCACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp TTGGAAAAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGACAAACCTGAGGTCATaGGCAATCTTCTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: LEKVIFNDPMVSKWKRKVTNLRS*AIFSSM
Trigger: CATGGAGGAGAAGATTGCTCATGACCTCAGGTTTGT...CACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTTTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp CTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTAATAGATGTTCACTCCCATTGTaGTGGTGTAACGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: LQEREFHTRSFCISNFNRCSLPL*WCNGSH
Trigger: GTGACTTCCGTTACACCACCACAATGGGAGTGAACA...TCTATTAAAATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp CTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTAATAGACAATGTTCTTCCCGTTaGCATAGATCTGTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LQEREFHTRSFCISNFNRQCSSR*HRSVAG
Trigger: ACCAGCTACAGATCTATGCCAACGGGAAGAACATTG...TCTATTAAAATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp CAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTATTCAATGACCCAATaGTATCAAAGTGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: QWDYRKENFTHGLSASVIYSMTQ*YQSGRG
Trigger: TCCTCTTCCACTTTGATACCATTGGGTCATTGAATA...AATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp CTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTAATAGAGCACAGAACATGTTTTaGGAGAACACATCCATCCTA +
Preference number: 4 (lower is better)
Translates to: LQEREFHTRSFCISNFNRAQNMF*ENTSIL
Trigger: TAGGATGGATGTGTTCTCTCAAAACATGTTCTGTGC...TCTATTAAAATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR TCA 90 bp AAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGACAACTGCACAGAACATGTTTTaGGAGAACACATCCATCCTA +
Preference number: 4 (lower is better)
Translates to: KVIFNDPMVSKWKRKVTTAQNMF*ENTSIL
Trigger: TAGGATGGATGTGTTCTCTCAAAACATGTTCTGTGC...AGTTGTCACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp AAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGACAACTCTGCATCTTGTAATATaGCTCATGGCAGTAGTACTG +
Preference number: 4 (lower is better)
Translates to: KVIFNDPMVSKWKRKVTTLHLVI*LMAVVL
Trigger: CAGTACTACTGCCATGAGCCATATTACAAGATGCAG...AGTTGTCACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp TTGGAAAAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGCTGCATCTTGTAATATaGCTCATGGCAGTAGTACTG +
Preference number: 4 (lower is better)
Translates to: LEKVIFNDPMVSKWKRKVLHLVI*LMAVVL
Trigger: CAGTACTACTGCCATGAGCCATATTACAAGATGCAG...CACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTTTTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp TTGGAAAAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGAAGAAAGGGGCCCTTTaGGTTGTTTCAGGTAAAGTA +
Preference number: 4 (lower is better)
Translates to: LEKVIFNDPMVSKWKRKVKKGAL*VVSGKV
Trigger: TACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTT...CACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTTTTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CCA 90 bp CTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTAATAGATATTCAATGACCCAATaGTATCAAAGTGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: LQEREFHTRSFCISNFNRYSMTQ*YQSGRG
Trigger: TCCTCTTCCACTTTGATACCATTGGGTCATTGAATA...TCTATTAAAATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS TCA 90 bp CTCTGTGCTTCTCCCCTCAGTGCTCACCGAGGGCCTCTACACCAGTaGGCGCCCATCCAGGGCATCCCCGGGCTCTCAGAGAGGCCGTTG +
Preference number: 5 (lower is better)
Translates to: LCASPLSAHRGPLHQ*APIQGIPGLSERPL
Trigger: CAACGGCCTCTCTGAGAGCCCGGGGATGCCCTGGATGGGCGCTCACTGGTGTAGAGGCCCTCGGTGAGCACTGAGGGGAGAAGCACAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536092.1
ENST00000672473.1
CDS TCA 90 bp TCACACCTCGAGTGCCTCCTGATGCCCTCGGCGGAACATGAGCCCTaGAGCCCACCCATCTCAGTGTCAGCAGGCACTGCCTCGTCCCTC +
Preference number: 5 (lower is better)
Translates to: SHLECLLMPSAEHEP*SPPISVSAGTASSL
Trigger: GAGGGACGAGGCAGTGCCTGCTGACACTGAGATGGGTGGGCTTCAGGGCTCATGTTCCGCCGAGGGCATCAGGAGGCACTCGAGGTGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648162.1
ENST00000672909.1
CDS CCA 90 bp GCCACCCTGAACCTCACAGACATGTTCTCAGCAGGGGTGCGTGGGTaGGGAGGATGGCCTGTGCAGCTGCTGCATCGGGTCACTCTCCAG +
Preference number: 5 (lower is better)
Translates to: ATLNLTDMFSAGVRG*GGWPVQLLHRVTLQ
Trigger: CTGGAGAGTGACCCGATGCAGCAGCTGCACAGGCCATCCTCCCCACCCACGCACCCCTGCTGAGAACATGTCTGTGAGGTTCAGGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538050.5
ENST00000671729.1
CDS CCA 90 bp CCCACCCTGAACCTCACAGACATGTTCTCAGCAGGGGTGCGTGGGTaGGGAGGATGGCCTGTGCAGCTGCTGCATCGGGTCACTCTCCAG +
Preference number: 5 (lower is better)
Translates to: PTLNLTDMFSAGVRG*GGWPVQLLHRVTLQ
Trigger: CTGGAGAGTGACCCGATGCAGCAGCTGCACAGGCCATCCTCCCCACCCACGCACCCCTGCTGAGAACATGTCTGTGAGGTTCAGGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536053.6
ENST00000540394.5
ENST00000671968.1
ENST00000672297.1
CDS CCA 90 bp GCCCGGACGCGTCCCTCCCCTCCCCTTCCAGGAATAGGACTGGCTTaGGACCAGTTAATGGAGGGTGAGGGTTTCCACCCGTGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: ARTRPSPPLPGIGLA*DQLMEGEGFHPWVS
Trigger: AGAGACCCACGGGTGGAAACCCTCACCCTCCATTAACTGGTCCCAAGCCAGTCCTATTCCTGGAAGGGGAGGGGAGGGACGCGTCCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540394.5
ENST00000672297.1
CDS CCA 90 bp TCTGCCCACCCTGAACCTCACAGACATGTTCTCAGCAGGGGTGCGTaGGTGGGGAGGATGGCCTGTGCAGCTGCTGCATCGGGTCACTCT +
Preference number: 5 (lower is better)
Translates to: SAHPEPHRHVLSRGA*VGRMACAAAASGHS
Trigger: AGAGTGACCCGATGCAGCAGCTGCACAGGCCATCCTCCCCACCCACGCACCCCTGCTGAGAACATGTCTGTGAGGTTCAGGGTGGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000536053.6
ENST00000540394.5
ENST00000671968.1
ENST00000672297.1
CDS CCA 90 bp AGGGCTCCCACAGGTTCAGCAAGAGCGTCTGGGAGAAACCATCTGTaGAGTGGGGGACACAGGCACAGAGTGTCCCGTCCTGGGCAAGGG +
Preference number: 5 (lower is better)
Translates to: RAPTGSARASGRNHL*SGGHRHRVSRPGQG
Trigger: CCCTTGCCCAGGACGGGACACTCTGTGCCTGTGTCCCCCACTCCACAGATGGTTTCTCCCAGACGCTCTTGCTGAACCTGTGGGAGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540394.5
ENST00000672297.1
CDS TCA 90 bp TGGTGTAGCGCAGCTTCCAGCCCCGGCTGTCCCCCGACTCATCTGTaGAGAACAGCAGATCCACAGCATTGCTGCTGGTGTCGAGGTCGG +
Preference number: 5 (lower is better)
Translates to: WCSAASSPGCPPTHL*RTADPQHCCWCRGR
Trigger: CCGACCTCGACACCAGCAGCAATGCTGTGGATCTGCTGTTCTTCACAGATGAGTCGGGGGACAGCCGGGGCTGGAAGCTGCGCTACACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000535233.6
ENST00000536053.6
ENST00000540394.5
ENST00000647956.2
ENST00000648162.1
ENST00000671919.1
ENST00000671968.1
ENST00000672297.1
ENST00000672909.1
ENST00000673372.1
CDS GCA 90 bp CCTCCCCAAATAACTTCTGAGGGATGGGAATGGAGCCTCCTGCCCTaGAGAACAGGGCCGGCACCAGGAGGTACAAGAGCCACCACTGGG +
Preference number: 5 (lower is better)
Translates to: PPQITSEGWEWSLLP*RTGPAPGGTRATTG
Trigger: CCCAGTGGTGGCTCTTGTACCTCCTGGTGCCGGCCCTGTTCTGCAGGGCAGGAGGCTCCATTCCCATCCCTCAGAAGTTATTTGGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536053.6
ENST00000671968.1
CDS CCA 90 bp AAGAGCCACCCTGAACCTCACAGACATGTTCTCAGCAGGGGTGCGTaGGTGGGGAGGATGGCCTGTGCAGCTGCTGCATCGGGTCACTCT +
Preference number: 5 (lower is better)
Translates to: KSHPEPHRHVLSRGA*VGRMACAAAASGHS
Trigger: AGAGTGACCCGATGCAGCAGCTGCACAGGCCATCCTCCCCACCCACGCACCCCTGCTGAGAACATGTCTGTGAGGTTCAGGGTGGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538050.5
ENST00000671729.1
CDS CCA 90 bp TGGAGCTGGAGGGGTTCAGCACTCTTGCCATGTGGGCAGTGGCTGTaGCAGGGGATGAGACGGCCATACCACTGGGCATTCTCCTCTCTG +
Preference number: 5 (lower is better)
Translates to: WSWRGSALLPCGQWL*QGMRRPYHWAFSSL
Trigger: CAGAGAGGAGAATGCCCAGTGGTATGGCCGTCTCATCCCCTGCCACAGCCACTGCCCACATGGCAAGAGTGCTGAACCCCTCCAGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540394.5
ENST00000672297.1
CDS-3UTR CAA 90 bp AGATGTAGCCTGATGCCTCCGTGTACAGCTCGCTGCTGCACTCAGCCTGGCAGGCCAGAGACCCACAGCTaGGTAGTAGGCCAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: RCSLMPPCTARCCTQPGRPETHS*VVGQEA
Trigger: GGCTTCCTGGCCTACTACCAAGCTGTGGGTCTCTGG...CCTGCCAGGCTGAGTGCAGCAGCGAGCTGTACACGGAGGCATCAGGCTACATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS TCA 90 bp AAACCATTCACACCTCGAGTGCCTCCTGATGCCCTCGGCGGAACATaGGCCCTGAAGCCCACCCATCTCAGTGTCAGCAGGCACTGCCTC +
Preference number: 5 (lower is better)
Translates to: KPFTPRVPPDALGGT*ALKPTHLSVSRHCL
Trigger: GAGGCAGTGCCTGCTGACACTGAGATGGGTGGGCTTCAGGGCTCATGTTCCGCCGAGGGCATCAGGAGGCACTCGAGGTGTGAATGGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648162.1
ENST00000672909.1
CDS GCA 90 bp CCTCCCCAAATAACTTCTGAGGGATGGGAATGGAGCCTCCTGCCCTaGAGAACAGGGCCGGCACCAGGAGGTACAAGAGCCACCCTGAAC +
Preference number: 5 (lower is better)
Translates to: PPQITSEGWEWSLLP*RTGPAPGGTRATLN
Trigger: GTTCAGGGTGGCTCTTGTACCTCCTGGTGCCGGCCCTGTTCTGCAGGGCAGGAGGCTCCATTCCCATCCCTCAGAAGTTATTTGGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538050.5
ENST00000671729.1
CDS GCA 90 bp CCTCCCCAAATAACTTCTGAGGGATGGGAATGGAGCCTCCTGCCCTaGAGAACAGGGCCGGCACCAGGAGGTACAAGAGCCACCTGCCAA +
Preference number: 5 (lower is better)
Translates to: PPQITSEGWEWSLLP*RTGPAPGGTRATCQ
Trigger: TTGGCAGGTGGCTCTTGTACCTCCTGGTGCCGGCCCTGTTCTGCAGGGCAGGAGGCTCCATTCCCATCCCTCAGAAGTTATTTGGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540394.5
ENST00000672297.1
CDS CCA 90 bp GGACTGGCTTGGGACCAGTTAATGGAGGGTGAGGGTTTCCACCCGTaGGTCTCTGAAAGGGCTCCCACAGGTTCAGCAAGAGCGTCTGGG +
Preference number: 5 (lower is better)
Translates to: GLAWDQLMEGEGFHP*VSERAPTGSARASG
Trigger: CCCAGACGCTCTTGCTGAACCTGTGGGAGCCCTTTCAGAGACCCACGGGTGGAAACCCTCACCCTCCATTAACTGGTCCCAAGCCAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540394.5
ENST00000672297.1
CDS CCA 90 bp GGACAGGGGGTAGGAAGAAGATCTGTTGCGGAGTGGCGCACGTGGTaGCTCAGTGATGGTCCTCCTTGTCTCGCCCAGAGTGCATCATGC +
Preference number: 5 (lower is better)
Translates to: GQGVGRRSVAEWRTW*LSDGPPCLAQSASC
Trigger: GCATGATGCACTCTGGGCGAGACAAGGAGGACCATCACTGAGCCACCACGTGCGCCACTCCGCAACAGATCTTCTTCCTACCCCCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543851.1
ENST00000672184.1
CDS CCA 90 bp CTGGTGGAAGAAGGACAGGGGGTAGGAAGAAGATCTGTTGCGGAGTaGCGCACGTGGTGGCTCAGTGATGGTCCTCCTTGTCTCGCCCAG +
Preference number: 5 (lower is better)
Translates to: LVEEGQGVGRRSVAE*RTWWLSDGPPCLAQ
Trigger: CTGGGCGAGACAAGGAGGACCATCACTGAGCCACCACGTGCGCCACTCCGCAACAGATCTTCTTCCTACCCCCTGTCCTTCTTCCACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543851.1
ENST00000672184.1
CDS-3UTR CAA 90 bp CTCAGCCTGGCAGGAATGCCTGTCTTCCTGAAGCTCATAGCCTGGACGGCAGGACAGTGGAGAACCCAGTaGCCCACAGAACCTCCCCAG +
Preference number: 5 (lower is better)
Translates to: LSLAGMPVFLKLIAWTAGQWRTQ*PTEPPQ
Trigger: CTGGGGAGGTTCTGTGGGCAACTGGGTTCTCCACTG...TCCTGCCGTCCAGGCTATGAGCTTCAGGAAGACAGGCATTCCTGCCAGGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR CAA 90 bp TGGAGATGTAGCCTGATGCCTCCGTGTACAGCTCGCTGCTGCACTCAGCCTGGCTTCTCAAGGCCCGTGTaGAATCCTGGGCTCTCCCGA +
Preference number: 5 (lower is better)
Translates to: WRCSLMPPCTARCCTQPGFSRPV*NPGLSR
Trigger: TCGGGAGAGCCCAGGATTCAACACGGGCCTTGAGAA...GCCAGGCTGAGTGCAGCAGCGAGCTGTACACGGAGGCATCAGGCTACATCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS CCA 90 bp GAAGGACAGGGGGTAGGAAGAAGATCTGTTGCGGAGTGGCGCACGTaGTGGCTCAGTGATGGTCCTCCTTGTCTCGCCCAGAGTGCATCA +
Preference number: 5 (lower is better)
Translates to: EGQGVGRRSVAEWRT*WLSDGPPCLAQSAS
Trigger: TGATGCACTCTGGGCGAGACAAGGAGGACCATCACTGAGCCACCACGTGCGCCACTCCGCAACAGATCTTCTTCCTACCCCCTGTCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543851.1
ENST00000672184.1
CDS TCA 90 bp TGGGCATGGCACGATGCCACGTGCCATCATCCTGGCAGACAGCTGTaGAGGAATGCAGCACCTGGTTCCCCTGTTGAGCAGAGGATAGAG +
Preference number: 5 (lower is better)
Translates to: WAWHDATCHHPGRQL*RNAAPGSPVEQRIE
Trigger: CTCTATCCTCTGCTCAACAGGGGAACCAGGTGCTGCATTCCTTCACAGCTGTCTGCCAGGATGATGGCACGTGGCATCGTGCCATGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602298.2
ENST00000672248.1
CDS GCA 90 bp TGTGCTGTGCAGGTGTACACCCTCTTGCATCTGGGCATGGCACGATaGCACGTGCCATCATCCTGGCAGACAGCTGTGAAGGAATGCAGC +
Preference number: 5 (lower is better)
Translates to: CAVQVYTLLHLGMAR*HVPSSWQTAVKECS
Trigger: GCTGCATTCCTTCACAGCTGTCTGCCAGGATGATGGCACGTGGCATCGTGCCATGCCCAGATGCAAGAGGGTGTACACCTGCACAGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649804.1
ENST00000671826.1
CDS CCA 90 bp CCAAGAGGCAATGGAGGTCCCCTTCCTGCCCTTTCCACACAGGAGTaGGAGGCAATACCAAGACATCTCTTGGCTCCCCCATGGATGTGG +
Preference number: 5 (lower is better)
Translates to: PRGNGGPLPALSTQE*EAIPRHLLAPPWMW
Trigger: CCACATCCATGGGGGAGCCAAGAGATGTCTTGGTATTGCCTCCCACTCCTGTGTGGAAAGGGCAGGAAGGGGACCTCCATTGCCTCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000602298.2
ENST00000672248.1
CDS CCA 90 bp ACCCTCTTGCATCTGGGCATGGCACGATGCCACGTGCCATCATCCTaGCAGACAGCTGTGAAGGAATGCAGCACCTGGTTCCCCTCTATG +
Preference number: 5 (lower is better)
Translates to: TLLHLGMARCHVPSS*QTAVKECSTWFPSM
Trigger: CATAGAGGGGAACCAGGTGCTGCATTCCTTCACAGCTGTCTGCCAGGATGATGGCACGTGGCATCGTGCCATGCCCAGATGCAAGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649804.1
ENST00000671826.1
CDS-3UTR CAA 90 bp GGCAGGAATGCCTGTCTTCCTGAAGCTCATAGCCTGGACGGCAGGAACAGAAGTCAGTGGAGAACCCAGTaGCCCACAGAACCTCCCCAG +
Preference number: 5 (lower is better)
Translates to: GRNACLPEAHSLDGRNRSQWRTQ*PTEPPQ
Trigger: CTGGGGAGGTTCTGTGGGCAACTGGGTTCTCCACTG...ACTTCTGTTCCTGCCGTCCAGGCTATGAGCTTCAGGAAGACAGGCATTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR CAA 90 bp AGATGTAGCCTGATGCCTCCGTGTACAGCTCGCTGCTGCACTCAGCCTGGCAGGGTCCCATTCTCCTCGTaGGAGAAGTCTGTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: RCSLMPPCTARCCTQPGRVPFSS*EKSVWK
Trigger: CTTCCACACAGACTTCTCCAACGAGGAGAATGGGAC...CCTGCCAGGCTGAGTGCAGCAGCGAGCTGTACACGGAGGCATCAGGCTACATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR CAA 90 bp CTCAGCCTGGCAGGAATGCCTGTCTTCCTGAAGCTCATAGCCTGGACGGCAGGATCCTCCTCCCCTGATTaGCTCCGGGAAGCACATTCA +
Preference number: 5 (lower is better)
Translates to: LSLAGMPVFLKLIAWTAGSSSPD*LREAHS
Trigger: TGAATGTGCTTCCCGGAGCAAATCAGGGGAGGAGGA...TCCTGCCGTCCAGGCTATGAGCTTCAGGAAGACAGGCATTCCTGCCAGGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS TCA 90 bp GGTAGGAAGAAGATCTGTTGCGGAGTGGCGCACGTGGTGGCTCAGTaGTGGTCCTCCTTGTCTCGCCCAGAGTGCATCATGCACCACAAT +
Preference number: 5 (lower is better)
Translates to: GRKKICCGVAHVVAQ*WSSLSRPECIMHHN
Trigger: ATTGTGGTGCATGATGCACTCTGGGCGAGACAAGGAGGACCATCACTGAGCCACCACGTGCGCCACTCCGCAACAGATCTTCTTCCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543851.1
ENST00000672184.1
CDS TCA 90 bp TCCTGGCAGACAGCTGTGAAGGAATGCAGCACCTGGTTCCCCTGTTaGGCAGAGGATAGAGGTGCCATCAGTGCCAAGAGGCAATGGAGG +
Preference number: 5 (lower is better)
Translates to: SWQTAVKECSTWFPC*AEDRGAISAKRQWR
Trigger: CCTCCATTGCCTCTTGGCACTGATGGCACCTCTATCCTCTGCTCAACAGGGGAACCAGGTGCTGCATTCCTTCACAGCTGTCTGCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602298.2
ENST00000672248.1
CDS TCA 90 bp ATTCCACCTCAGCCTAATCAAACCATTCACACCTCGAGTGCCTCCTaGTGCCCTCGGCGGAACATGAGCCCTGAAGCCCACCCATCTCAG +
Preference number: 5 (lower is better)
Translates to: IPPQPNQTIHTSSAS*CPRRNMSPEAHPSQ
Trigger: CTGAGATGGGTGGGCTTCAGGGCTCATGTTCCGCCGAGGGCATCAGGAGGCACTCGAGGTGTGAATGGTTTGATTAGGCTGAGGTGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648162.1
ENST00000672909.1
CDS-3UTR CAA 90 bp CCTGGCAGGAATGCCTGTCTTCCTGAAGCTCATAGCCTGGACGGCAGGAACAGATCCTCCTCCCCTGATTaGCTCCGGGAAGCACATTCA +
Preference number: 5 (lower is better)
Translates to: PGRNACLPEAHSLDGRNRSSSPD*LREAHS
Trigger: TGAATGTGCTTCCCGGAGCAAATCAGGGGAGGAGGA...TCTGTTCCTGCCGTCCAGGCTATGAGCTTCAGGAAGACAGGCATTCCTGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS CCA 90 bp TTGATCTTGCATCTGGGCATGGCACGATGCCACGTGCCATCATCCTaGCAGACAGCTGTGAAGGAATGCAGCACCTGGTTCCCCTCTATG +
Preference number: 5 (lower is better)
Translates to: LILHLGMARCHVPSS*QTAVKECSTWFPSM
Trigger: CATAGAGGGGAACCAGGTGCTGCATTCCTTCACAGCTGTCTGCCAGGATGATGGCACGTGGCATCGTGCCATGCCCAGATGCAAGATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000535233.6
ENST00000536053.6
ENST00000540394.5
ENST00000647956.2
ENST00000648162.1
ENST00000671919.1
ENST00000671968.1
ENST00000672297.1
ENST00000672909.1
ENST00000673372.1
CDS-3UTR CAA 90 bp CTTCCTGAAGCTCATAGCCTGGACGGCAGGAACAGAAGTAGCCTCCAACGTAGTTTCTCAAGGCCCGTGTaGAATCCTGGGCTCTCCCGA +
Preference number: 5 (lower is better)
Translates to: LPEAHSLDGRNRSSLQRSFSRPV*NPGLSR
Trigger: TCGGGAGAGCCCAGGATTCAACACGGGCCTTGAGAA...ACTACGTTGGAGGCTACTTCTGTTCCTGCCGTCCAGGCTATGAGCTTCAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS TCA 90 bp CTGGAAGGCATTCAGGAAGGAGGGTTAAGCTTCTGCTGGGAGACCTaGGTAGTGGCTCTGATCTTAGGGAGGTCACTCACCAGAGACCCA +
Preference number: 5 (lower is better)
Translates to: LEGIQEGGLSFCWET*VVALILGRSLTRDP
Trigger: TGGGTCTCTGGTGAGTGACCTCCCTAAGATCAGAGCCACTACTCAGGTCTCCCAGCAGAAGCTTAACCCTCCTTCCTGAATGCCTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000543362.5
ENST00000543851.1
ENST00000671834.1
ENST00000672184.1
CDS GCA 90 bp GCAAGCACCGAGGAATCTTCTCTCCCTTCTGTTCATTCTTCCAAATaGCCTGTGCTGTGCAGGTGTACACCCCTTGCTCAGACTCCCTGC +
Preference number: 5 (lower is better)
Translates to: ASTEESSLPSVHSSK*PVLCRCTPLAQTPC
Trigger: GCAGGGAGTCTGAGCAAGGGGTGTACACCTGCACAGCACAGGGCATTTGGAAGAATGAACAGAAGGGAGAGAAGATTCCTCGGTGCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000535233.6
ENST00000536053.6
ENST00000540394.5
ENST00000602298.2
ENST00000647956.2
ENST00000648162.1
ENST00000671919.1
ENST00000671968.1
ENST00000672248.1
ENST00000672297.1
ENST00000672909.1
ENST00000673372.1
CDS-3UTR CAA 90 bp GGAAGGCATTCAGGAAGGAGGGTTAAGCTTCTGCTGGGAGACCTGAGTAGTGGCGTCCCATTCTCCTCGTaGGAGAAGTCTGTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: GRHSGRRVKLLLGDLSSGVPFSS*EKSVWK
Trigger: CTTCCACACAGACTTCTCCAACGAGGAGAATGGGAC...GCCACTACTCAGGTCTCCCAGCAGAAGCTTAACCCTCCTTCCTGAATGCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR CAA 90 bp ATTCATCAAGGTCTGGAAGGCATTCAGGAAGGAGGGTTAAGCTTCTGCTGGGAGCCAGAGACCCACAGCTaGGTAGTAGGCCAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: IHQGLEGIQEGGLSFCWEPETHS*VVGQEA
Trigger: GGCTTCCTGGCCTACTACCAAGCTGTGGGTCTCTGG...CTCCCAGCAGAAGCTTAACCCTCCTTCCTGAATGCCTTCCAGACCTTGATGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS GCA 90 bp GCAAGCACCGAGGAATCTTCTCTCCCTTCTGTTCATTCTTCCAAATaGCCTGTGCTGTGCAGGTGTACACCCTCTTGCATCTGGGCATGG +
Preference number: 5 (lower is better)
Translates to: ASTEESSLPSVHSSK*PVLCRCTPSCIWAW
Trigger: CCATGCCCAGATGCAAGAGGGTGTACACCTGCACAGCACAGGGCATTTGGAAGAATGAACAGAAGGGAGAGAAGATTCCTCGGTGCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649804.1
ENST00000671826.1
CDS CCA 90 bp CACATCCATCCTATTCTTTCCCCGGAGCCAGTTCTCACAGGCCTGTaGATTAGCTACGGGCAGACGGACAAACCTGAGGTCATGAGCAAT +
Preference number: 5 (lower is better)
Translates to: HIHPILSPEPVLTGL*ISYGQTDKPEVMSN
Trigger: ATTGCTCATGACCTCAGGTTTGTCCGTCTGCCCGTAGCTAATCCACAGGCCTGTGAGAACTGGCTCCGGGGAAAGAATAGGATGGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000535233.6
ENST00000536053.6
ENST00000540394.5
ENST00000602298.2
ENST00000647956.2
ENST00000648162.1
ENST00000649804.1
ENST00000671826.1
ENST00000671919.1
ENST00000671968.1
ENST00000672248.1
ENST00000672297.1
ENST00000672909.1
ENST00000673372.1
CDS TCA 90 bp GGTAGTCTCCATTCTTCTGGACCCAGGACACCCACCCAATCCTCCTaGTGGAGCTGGAAGCACCTTGGAGTAAAGAACAATGCATCAGGT +
Preference number: 5 (lower is better)
Translates to: GSLHSSGPRTPTQSS*WSWKHLGVKNNASG
Trigger: ACCTGATGCATTGTTCTTTACTCCAAGGTGCTTCCAGCTCCATCAGGAGGATTGGGTGGGTGTCCTGGGTCCAGAAGAATGGAGACTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602298.2
ENST00000672248.1
CDS-3UTR CAA 90 bp CCTGGCAGGAATGCCTGTCTTCCTGAAGCTCATAGCCTGGACGGCAGGAACAGAAAGGTCAGCAGCATCTaGTTCCCTTGGGACATAAAT +
Preference number: 5 (lower is better)
Translates to: PGRNACLPEAHSLDGRNRKVSSI*FPWDIN
Trigger: ATTTATGTCCCAAGGGAACAAGATGCTGCTGACCTT...TCTGTTCCTGCCGTCCAGGCTATGAGCTTCAGGAAGACAGGCATTCCTGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543362.5
ENST00000671834.1
CDS-3UTR CAA 90 bp AAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAGCAGGTGTACACCCCTaGCTCAGACTCCCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: KGALWVVSGKVHQWDYRKAGVHP*LRLPAA
Trigger: GGCAGCAGGGAGTCTGAGCAAGGGGTGTACACCTGC...TTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp AAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAACAGTGGAGAACCCAGTaGCCCACAGAACCTCCCCAG +
Preference number: 5 (lower is better)
Translates to: KGALWVVSGKVHQWDYRKQWRTQ*PTEPPQ
Trigger: CTGGGGAGGTTCTGTGGGCAACTGGGTTCTCCACTG...TTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp AAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAGAGCAGATCCACAGCATaGCTGCTGGTGTCGAGGTCG +
Preference number: 5 (lower is better)
Translates to: KGPFGLFQVKYINGTTGKSRSTA*LLVSRS
Trigger: CGACCTCGACACCAGCAGCAATGCTGTGGATCTGCT...CTTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp CATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAGCAGGTGTACACCCCTaGCTCAGACTCCCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: HQWDYRKENFTHGLSASVAGVHP*LRLPAA
Trigger: GGCAGCAGGGAGTCTGAGCAAGGGGTGTACACCTGC...TACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp GTACATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAAAAGGCTCCAGGAACTaGAGGTGCAGGGTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: VHQWDYRKENFTHGLSASKGSRN*RCRVRP
Trigger: GGGCCTCACCCTGCACCTCAAGTTCCTGGAGCCTTT...TGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp AAGAAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGCAAAGAGGCGTTGCTTaGCGCTTCGTGTTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: KKGALWVVSGKVHQWDYRQRGVA*RFVFLG
Trigger: CCCAAGGAACACGAAGCGCAAAGCAACGCCTCTTTG...CCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp GTACATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCACAGATGGGGAGGAGGTaGGGACCCAGGGTGACACTA +
Preference number: 5 (lower is better)
Translates to: VHQWDYRKENFTHGLSASQMGRR*GPRVTL
Trigger: TAGTGTCACCCTGGGTCCCAACCTCCTCCCCATCTG...TGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp CATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTACAGATGGGGAGGAGGTaGGGACCCAGGGTGACACTA +
Preference number: 5 (lower is better)
Translates to: HQWDYRKENFTHGLSASVQMGRR*GPRVTL
Trigger: TAGTGTCACCCTGGGTCCCAACCTCCTCCCCATCTG...TACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp AAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAATCAAGGTCCACAGCTaGGTAGTAGGCCAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: KGALWVVSGKVHQWDYRKIKVHS*VVGQEA
Trigger: GGCTTCCTGGCCTACTACCAAGCTGTGGACCTTGAT...TTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp CATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTATTCTCAAGGCCCGTGTaGAATCCTGGGCTCTCCCGA +
Preference number: 5 (lower is better)
Translates to: HQWDYRKENFTHGLSASVFSRPV*NPGLSR
Trigger: TCGGGAGAGCCCAGGATTCAACACGGGCCTTGAGAA...TACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp CATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAGCCCATCTTGGCTTTTaGCCCTCCGATGATGCGCTG +
Preference number: 5 (lower is better)
Translates to: HQWDYRKENFTHGLSASVAHLGF*PSDDAL
Trigger: CAGCGCATCATCGGAGGGCAAAAAGCCAAGATGGGC...TACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp GTACATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCATGCGCTTCGTGTTCCTaGGGATACAGGGTGTGGGCA +
Preference number: 5 (lower is better)
Translates to: VHQWDYRKENFTHGLSASCASCS*GYRVWA
Trigger: TGCCCACACCCTGTATCCCAAGGAACACGAAGCGCA...TGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp CATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTATCCTCCTCCCCTGATTaGCTCCGGGAAGCACATTCA +
Preference number: 5 (lower is better)
Translates to: HQWDYRKENFTHGLSASVSSSPD*LREAHS
Trigger: TGAATGTGCTTCCCGGAGCAAATCAGGGGAGGAGGA...TACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp AAGAAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAGGTGTTCACTCCCATaGTGGTGGTGTAACGGAAGT +
Preference number: 5 (lower is better)
Translates to: KKGALWVVSGKVHQWDYRRCSLP*WWCNGS
Trigger: ACTTCCGTTACACCACCACAATGGGAGTGAACACCT...CCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp CAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTGCGCTTCGTGTTCCTaGGGATACAGGGTGTGGGCA +
Preference number: 5 (lower is better)
Translates to: QWDYRKENFTHGLSASVICASCS*GYRVWA
Trigger: TGCCCACACCCTGTATCCCAAGGAACACGAAGCGCA...AATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp AAAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAACATCCAAAGAGGCGTaGCTTTGCGCTTCGTGTTCC +
Preference number: 5 (lower is better)
Translates to: KGALWVVSGKVHQWDYRKTSKEA*LCASCS
Trigger: GGAACACGAAGCGCAAAGCAACGCCTCTTTGGATGT...TTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS TCA 90 bp CTGATGGAGCTGGAAGCACCTTGGAGTAAAGAACAATGCATCAGGTaGACTCGACTTGATGCAACATTCAAATGTGAGCTCCACAAAGGC +
Preference number: 5 (lower is better)
Translates to: LMELEAPWSKEQCIR*TRLDATFKCELHKG
Trigger: GCCTTTGTGGAGCTCACATTTGAATGTTGCATCAAGTCGAGTTCACCTGATGCATTGTTCTTTACTCCAAGGTGCTTCCAGCTCCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602298.2
ENST00000672248.1
CDS-3UTR CAA 90 bp CATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAGTCCCATTCTCCTCGTaGGAGAAGTCTGTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: HQWDYRKENFTHGLSASVVPFSS*EKSVWK
Trigger: CTTCCACACAGACTTCTCCAACGAGGAGAATGGGAC...TACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp CAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTCCTCCTCCCCTGATTaGCTCCGGGAAGCACATTCA +
Preference number: 5 (lower is better)
Translates to: QWDYRKENFTHGLSASVISSSPD*LREAHS
Trigger: TGAATGTGCTTCCCGGAGCAAATCAGGGGAGGAGGA...AATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp AAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAGATAGGGGCAGTGTACTaGCTGGTGGTCATCAATATC +
Preference number: 5 (lower is better)
Translates to: KGPFGLFQVKYINGTTGKIGAVY*LVVINI
Trigger: GATATTGATGACCACCAGCAAGTACACTGCCCCTAT...CTTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp CAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTCCACAGTCCTTGATCTaGCATCTGGGCATGGCACGA +
Preference number: 5 (lower is better)
Translates to: QWDYRKENFTHGLSASVIPQSLI*HLGMAR
Trigger: TCGTGCCATGCCCAGATGCAAGATCAAGGACTGTGG...AATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp CATCAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAACATCCAAAGAGGCGTaGCTTTGCGCTTCGTGTTCC +
Preference number: 5 (lower is better)
Translates to: HQWDYRKENFTHGLSASVTSKEA*LCASCS
Trigger: GGAACACGAAGCGCAAAGCAACGCCTCTTTGGATGT...TACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp AAGGGGCCCTTTGGGTTGTTTCAGGTAAAGTACATCAATGGGACTACAGGAAAGAAGGGGCCCTTTGGGTaGTTTCAGGTAAAGTACATC +
Preference number: 5 (lower is better)
Translates to: KGPFGLFQVKYINGTTGKKGPFG*FQVKYI
Trigger: GATGTACTTTACCTGAAACAACCCAAAGGGCCCCTT...CTTTCCTGTAGTCCCATTGATGTACTTTACCTGAAACAACCCAAAGGGCCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS GCA 90 bp TTCTATGATGTGAATAACAAATGCAAAAGTAAGGGCAGTGGGTGGTaGAGGCAAGGGAGGGTTGTAATAGGAGCAAAGAGGTTGGTAGTC +
Preference number: 5 (lower is better)
Translates to: FYDVNNKCKSKGSGW*RQGRVVIGAKRLVV
Trigger: GACTACCAACCTCTTTGCTCCTATTACAACCCTCCCTTGCCTGCACCACCCACTGCCCTTACTTTTGCATTTGTTATTCACATCATAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602298.2
ENST00000672248.1
CDS CCA 90 bp AGAGCAGAGCTAACTGATAGACCTGATCATCCTCTCTCTAGACTGTaGCCTGTTCCTACTGAGGTCCAGTTGAATCCCACAATTTGTAAT +
Preference number: 5 (lower is better)
Translates to: RAELTDRPDHPLSRL*PVPTEVQLNPTICN
Trigger: ATTACAAATTGTGGGATTCAACTGGACCTCAGTAGGAACAGGCCACAGTCTAGAGAGAGGATGATCAGGTCTATCAGTTAGCTCTGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602298.2
ENST00000672248.1
CDS-3UTR CAA 90 bp AAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGACAACTCAGTGGAGAACCCAGTaGCCCACAGAACCTCCCCAG +
Preference number: 5 (lower is better)
Translates to: KVIFNDPMVSKWKRKVTTQWRTQ*PTEPPQ
Trigger: CTGGGGAGGTTCTGTGGGCAACTGGGTTCTCCACTG...AGTTGTCACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp TTGGAAAAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGAGCAGATCCACAGCATaGCTGCTGGTGTCGAGGTCG +
Preference number: 5 (lower is better)
Translates to: LEKVIFNDPMVSKWKRKVSRSTA*LLVSRS
Trigger: CGACCTCGACACCAGCAGCAATGCTGTGGATCTGCT...CACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTTTTCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp CTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTAATAGAGCCCATCTTGGCTTTTaGCCCTCCGATGATGCGCTG +
Preference number: 5 (lower is better)
Translates to: LQEREFHTRSFCISNFNRAHLGF*PSDDAL
Trigger: CAGCGCATCATCGGAGGGCAAAAAGCCAAGATGGGC...TCTATTAAAATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp AAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGACAACTATCAAGGTCCACAGCTaGGTAGTAGGCCAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: KVIFNDPMVSKWKRKVTTIKVHS*VVGQEA
Trigger: GGCTTCCTGGCCTACTACCAAGCTGTGGACCTTGAT...AGTTGTCACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp CAATGGGACTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTATAGGGGCAGTGTACTaGCTGGTGGTCATCAATATC +
Preference number: 5 (lower is better)
Translates to: QWDYRKENFTHGLSASVIIGAVY*LVVINI
Trigger: GATATTGATGACCACCAGCAAGTACACTGCCCCTAT...AATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAGTCCCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp TTGGAAAAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGCAAAGAGGCGTTGCTTaGCGCTTCGTGTTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: LEKVIFNDPMVSKWKRKVQRGVA*RFVFLG
Trigger: CCCAAGGAACACGAAGCGCAAAGCAACGCCTCTTTG...CACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTTTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp CTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTAATAGAGTCCCATTCTCCTCGTaGGAGAAGTCTGTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: LQEREFHTRSFCISNFNRVPFSS*EKSVWK
Trigger: CTTCCACACAGACTTCTCCAACGAGGAGAATGGGAC...TCTATTAAAATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp CTACAGGAAAGAGAATTTCACACACGGTCTTTCTGCATCAGTAATTTTAATAGAAGGTGTTCACTCCCATaGTGGTGGTGTAACGGAAGT +
Preference number: 5 (lower is better)
Translates to: LQEREFHTRSFCISNFNRRCSLP*WWCNGS
Trigger: ACTTCCGTTACACCACCACAATGGGAGTGAACACCT...TCTATTAAAATTACTGATGCAGAAAGACCGTGTGTGAAATTCTCTTTCCTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp TTGGAAAAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGTATGAGCTGGTAGCCTaGCTTGCAGGTAGCAATGAA +
Preference number: 5 (lower is better)
Translates to: LEKVIFNDPMVSKWKRKVYELVA*LAGSNE
Trigger: TTCATTGCTACCTGCAAGCAAGGCTACCAGCTCATA...CACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTTTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS-3UTR CAA 90 bp TTGGAAAAAGTTATATTCAATGACCCAATGGTATCAAAGTGGAAGAGGAAAGTGAAGGGGCCCTTTGGGTaGTTTCAGGTAAAGTACATC +
Preference number: 5 (lower is better)
Translates to: LEKVIFNDPMVSKWKRKVKGPFG*FQVKYI
Trigger: GATGTACTTTACCTGAAACAACCCAAAGGGCCCCTT...CACTTTCCTCTTCCACTTTGATACCATTGGGTCATTGAATATAACTTTTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647956.2
ENST00000673372.1
CDS TCA 72 bp TCTCCCCTCAGTGCTCACCGAGGGCCTCTACACCAGTaGGCGCCCATCCAGGGCATCCCCGGGCTCTCAGAG +
Preference number: 6 (lower is better)
Translates to: SPLSAHRGPLHQ*APIQGIPGLSE
Trigger: CTCTGAGAGCCCGGGGATGCCCTGGATGGGCGCTCACTGGTGTAGAGGCCCTCGGTGAGCACTGAGGGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536092.1
ENST00000672473.1
CDS GCA 72 bp GGGTGCGTGGGTGGGGAGGATGGCCTGTGCAGCTGCTaGATCGGGTCACTCTCCAGGGCAGTGTCCAGTCCA +
Preference number: 6 (lower is better)
Translates to: GCVGGEDGLCSC*IGSLSRAVSSP
Trigger: TGGACTGGACACTGCCCTGGAGAGTGACCCGATGCAGCAGCTGCACAGGCCATCCTCCCCACCCACGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540394.5
ENST00000672297.1
CDS TCA 72 bp ACACCTCGAGTGCCTCCTGATGCCCTCGGCGGAACATaGGCCCTGAAGCCCACCCATCTCAGTGTCAGCAGG +
Preference number: 6 (lower is better)
Translates to: TPRVPPDALGGT*ALKPTHLSVSR
Trigger: CCTGCTGACACTGAGATGGGTGGGCTTCAGGGCTCATGTTCCGCCGAGGGCATCAGGAGGCACTCGAGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648162.1
ENST00000672909.1
CDS GCA 72 bp GTCTTCGTGCACTGTGTGCAGAGGGAGCCCGCGTCATaGACAGCAGGGAGGGGAGGGTTTTCTGTGGAGTGG +
Preference number: 6 (lower is better)
Translates to: VFVHCVQREPAS*TAGRGGFSVEW
Trigger: CCACTCCACAGAAAACCCTCCCCTCCCTGCTGTGCATGACGCGGGCTCCCTCTGCACACAGTGCACGAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540610.5
ENST00000673318.1
CDS CCA 72 bp CCTGAACCTCACAGACATGTTCTCAGCAGGGGTGCGTaGGTGGGGAGGATGGCCTGTGCAGCTGCTGCATCG +
Preference number: 6 (lower is better)
Translates to: PEPHRHVLSRGA*VGRMACAAAAS
Trigger: CGATGCAGCAGCTGCACAGGCCATCCTCCCCACCCACGCACCCCTGCTGAGAACATGTCTGTGAGGTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000536053.6
ENST00000538050.5
ENST00000540394.5
ENST00000671729.1
ENST00000671968.1
ENST00000672297.1
CDS CCA 72 bp AGCTGGAGGGGTTCAGCACTCTTGCCATGTGGGCAGTaGCTGTGGCAGGGGATGAGACGGCCATACCACTGG +
Preference number: 6 (lower is better)
Translates to: SWRGSALLPCGQ*LWQGMRRPYHW
Trigger: CCAGTGGTATGGCCGTCTCATCCCCTGCCACAGCCACTGCCCACATGGCAAGAGTGCTGAACCCCTCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540394.5
ENST00000672297.1
CDS CCA 72 bp CGTCCCTCCCCTCCCCTTCCAGGAATAGGACTGGCTTaGGACCAGTTAATGGAGGGTGAGGGTTTCCACCCG +
Preference number: 6 (lower is better)
Translates to: RPSPPLPGIGLA*DQLMEGEGFHP
Trigger: CGGGTGGAAACCCTCACCCTCCATTAACTGGTCCCAAGCCAGTCCTATTCCTGGAAGGGGAGGGGAGGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540394.5
ENST00000672297.1
CDS CCA 72 bp CAGTGGCTGTGGCAGGGGATGAGACGGCCATACCACTaGGCATTCTCCTCTCTGCCCACCCTGAACCTCACA +
Preference number: 6 (lower is better)
Translates to: QWLWQGMRRPYH*AFSSLPTLNLT
Trigger: TGTGAGGTTCAGGGTGGGCAGAGAGGAGAATGCCCAGTGGTATGGCCGTCTCATCCCCTGCCACAGCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540394.5
ENST00000672297.1
CDS CCA 72 bp AGGGGTTCAGCACTCTTGCCATGTGGGCAGTGGCTGTaGCAGGGGATGAGACGGCCATACCACTGGGCATTC +
Preference number: 6 (lower is better)
Translates to: RGSALLPCGQWL*QGMRRPYHWAF
Trigger: GAATGCCCAGTGGTATGGCCGTCTCATCCCCTGCCACAGCCACTGCCCACATGGCAAGAGTGCTGAACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540394.5
ENST00000672297.1
CDS CCA 72 bp GGGGTAGGAAGAAGATCTGTTGCGGAGTGGCGCACGTaGTGGCTCAGTGATGGTCCTCCTTGTCTCGCCCAG +
Preference number: 6 (lower is better)
Translates to: GVGRRSVAEWRT*WLSDGPPCLAQ
Trigger: CTGGGCGAGACAAGGAGGACCATCACTGAGCCACCACGTGCGCCACTCCGCAACAGATCTTCTTCCTACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543851.1
ENST00000672184.1
CDS CCA 72 bp GTGCTGTGCAGGTGTACACCCTCTTGCATCTGGGCATaGCACGATGCCACGTGCCATCATCCTGGCAGACAG +
Preference number: 6 (lower is better)
Translates to: VLCRCTPSCIWA*HDATCHHPGRQ
Trigger: CTGTCTGCCAGGATGATGGCACGTGGCATCGTGCCATGCCCAGATGCAAGAGGGTGTACACCTGCACAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649804.1
ENST00000671826.1
CDS TCA 72 bp GGATGGGAATGGAGCCTCATTTCTCAAGGCCCGTGTTaGATCCTGGGCTCTCCCGACAGCGTCTTCGTGCAC +
Preference number: 6 (lower is better)
Translates to: GWEWSLISQGPC*ILGSPDSVFVH
Trigger: GTGCACGAAGACGCTGTCGGGAGAGCCCAGGATTCAACACGGGCCTTGAGAAATGAGGCTCCATTCCCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541042.5
ENST00000673068.1
CDS TCA 72 bp AATTCTAGTTGTGTGGGAACTTACCCAGCCCATGGGTaGTGTTGGCCGTTCCTGCCCCAGCTGGCCAGGGGA +
Preference number: 6 (lower is better)
Translates to: NSSCVGTYPAHG*CWPFLPQLARG
Trigger: TCCCCTGGCCAGCTGGGGCAGGAACGGCCAACATCACCCATGGGCTGGGTAAGTTCCCACACAACTAGAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540394.5
ENST00000672297.1
CDS TCA 72 bp AAGATCTGTTGCGGAGTGGCGCACGTGGTGGCTCAGTaGTGGTCCTCCTTGTCTCGCCCAGAGTGCATCATG +
Preference number: 6 (lower is better)
Translates to: KICCGVAHVVAQ*WSSLSRPECIM
Trigger: CATGATGCACTCTGGGCGAGACAAGGAGGACCATCACTGAGCCACCACGTGCGCCACTCCGCAACAGATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543851.1
ENST00000672184.1
CDS TCA 72 bp CAGCCTAATCAAACCATTCACACCTCGAGTGCCTCCTaGTGCCCTCGGCGGAACATGAGCCCTGAAGCCCAC +
Preference number: 6 (lower is better)
Translates to: QPNQTIHTSSAS*CPRRNMSPEAH
Trigger: GTGGGCTTCAGGGCTCATGTTCCGCCGAGGGCATCAGGAGGCACTCGAGGTGTGAATGGTTTGATTAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648162.1
ENST00000672909.1
CDS GCA 72 bp CAGGTGTACACCCTCTTGCATCTGGGCATGGCACGATaGCACGTGCCATCATCCTGGCAGACAGCTGTGAAG +
Preference number: 6 (lower is better)
Translates to: QVYTLLHLGMAR*HVPSSWQTAVK
Trigger: CTTCACAGCTGTCTGCCAGGATGATGGCACGTGGCATCGTGCCATGCCCAGATGCAAGAGGGTGTACACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649804.1
ENST00000671826.1
CDS CCA 72 bp GTAGGAAGAAGATCTGTTGCGGAGTGGCGCACGTGGTaGCTCAGTGATGGTCCTCCTTGTCTCGCCCAGAGT +
Preference number: 6 (lower is better)
Translates to: VGRRSVAEWRTW*LSDGPPCLAQS
Trigger: ACTCTGGGCGAGACAAGGAGGACCATCACTGAGCCACCACGTGCGCCACTCCGCAACAGATCTTCTTCCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543851.1
ENST00000672184.1
CDS CCA 72 bp GAAGGACAGGGGGTAGGAAGAAGATCTGTTGCGGAGTaGCGCACGTGGTGGCTCAGTGATGGTCCTCCTTGT +
Preference number: 6 (lower is better)
Translates to: EGQGVGRRSVAE*RTWWLSDGPPC
Trigger: ACAAGGAGGACCATCACTGAGCCACCACGTGCGCCACTCCGCAACAGATCTTCTTCCTACCCCCTGTCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543851.1
ENST00000672184.1
CDS CCA 72 bp CCACACAGGAGTGGGAGGCAATACCAAGACATCTCTTaGCTCCCCCATGGATGTGGCTCCCCCATGGATGTG +
Preference number: 6 (lower is better)
Translates to: PHRSGRQYQDIS*LPHGCGSPMDV
Trigger: CACATCCATGGGGGAGCCACATCCATGGGGGAGCCAAGAGATGTCTTGGTATTGCCTCCCACTCCTGTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000602298.2
ENST00000672248.1
CDS CCA 72 bp GCAGAGGATAGAGGTGCCATCAGTGCCAAGAGGCAATaGAGGTCCCCTTCCTGCCCTTTCCACACAGGAGTG +
Preference number: 6 (lower is better)
Translates to: AEDRGAISAKRQ*RSPSCPFHTGV
Trigger: CACTCCTGTGTGGAAAGGGCAGGAAGGGGACCTCCATTGCCTCTTGGCACTGATGGCACCTCTATCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000602298.2
ENST00000672248.1
CDS CAA 72 bp TGCTGGTGGTCATCAATATCAAAAGGCTCCAGGAACTaGAGGTGCAGGGTGAGGCCCCGCTCCACCCGGATG +
Preference number: 6 (lower is better)
Translates to: CWWSSISKGSRN*RCRVRPRSTRM
Trigger: CATCCGGGTGGAGCGGGGCCTCACCCTGCACCTCAAGTTCCTGGAGCCTTTTGATATTGATGACCACCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000535233.6
ENST00000536053.6
ENST00000540394.5
ENST00000647956.2
ENST00000648162.1
ENST00000671919.1
ENST00000671968.1
ENST00000672297.1
ENST00000672909.1
ENST00000673372.1
CDS CAA 72 bp GGGATGGGAATGGAGCCTCATTTCTCAAGGCCCGTGTaGAATCCTGGGCTCTCCCGACAGCGTCTTCGTGCA +
Preference number: 6 (lower is better)
Translates to: GMGMEPHFSRPV*NPGLSRQRLRA
Trigger: TGCACGAAGACGCTGTCGGGAGAGCCCAGGATTCAACACGGGCCTTGAGAAATGAGGCTCCATTCCCATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541042.5
ENST00000673068.1
CDS TCA 72 bp CCCATCACCCTTACTCACATTTCTCAAGGCCCGTGTTaGATCCTGGGCTCTCCCGACAGCGTCTTCGTGCAC +
Preference number: 6 (lower is better)
Translates to: PITLTHISQGPC*ILGSPDSVFVH
Trigger: GTGCACGAAGACGCTGTCGGGAGAGCCCAGGATTCAACACGGGCCTTGAGAAATGTGAGTAAGGGTGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540394.5
ENST00000672297.1
CDS GCA 72 bp CCACAGTCCTTGATCTTGCATCTGGGCATGGCACGATaGCACGTGCCATCATCCTGGCAGACAGCTGTGAAG +
Preference number: 6 (lower is better)
Translates to: PQSLILHLGMAR*HVPSSWQTAVK
Trigger: CTTCACAGCTGTCTGCCAGGATGATGGCACGTGGCATCGTGCCATGCCCAGATGCAAGATCAAGGACTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000535233.6
ENST00000536053.6
ENST00000540394.5
ENST00000602298.2
ENST00000647956.2
ENST00000648162.1
ENST00000671919.1
ENST00000671968.1
ENST00000672248.1
ENST00000672297.1
ENST00000672909.1
ENST00000673372.1
CDS CCA 72 bp CCTATTCTTTCCCCGGAGCCAGTTCTCACAGGCCTGTaGATTAGCTACGGGCAGACGGACAAACCTGAGGTC +
Preference number: 6 (lower is better)
Translates to: PILSPEPVLTGL*ISYGQTDKPEV
Trigger: GACCTCAGGTTTGTCCGTCTGCCCGTAGCTAATCCACAGGCCTGTGAGAACTGGCTCCGGGGAAAGAATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000535233.6
ENST00000536053.6
ENST00000540394.5
ENST00000602298.2
ENST00000647956.2
ENST00000648162.1
ENST00000649804.1
ENST00000671826.1
ENST00000671919.1
ENST00000671968.1
ENST00000672248.1
ENST00000672297.1
ENST00000672909.1
ENST00000673372.1
CDS CCA 72 bp AATGGAGCCTCATTTCTCAAGGCCCGTGTTGAATCCTaGGCTCTCCCGACAGCGTCTTCGTGCACTGTGTGC +
Preference number: 6 (lower is better)
Translates to: NGASFLKARVES*ALPTASSCTVC
Trigger: GCACACAGTGCACGAAGACGCTGTCGGGAGAGCCCAGGATTCAACACGGGCCTTGAGAAATGAGGCTCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541042.5
ENST00000673068.1
CDS CCA 72 bp TGGGACCAGTTAATGGAGGGTGAGGGTTTCCACCCGTaGGTCTCTGAAAGGGCTCCCACAGGTTCAGCAAGA +
Preference number: 6 (lower is better)
Translates to: WDQLMEGEGFHP*VSERAPTGSAR
Trigger: TCTTGCTGAACCTGTGGGAGCCCTTTCAGAGACCCACGGGTGGAAACCCTCACCCTCCATTAACTGGTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540394.5
ENST00000672297.1
CDS CAA 72 bp TGTGTGGCCCAGGAACACATCCAAAGAGGCGTTGCTTaGCGCTTCGTGTTCCTTGGGATACAGGGTGTGGGC +
Preference number: 6 (lower is better)
Translates to: CVAQEHIQRGVA*RFVFLGIQGVG
Trigger: GCCCACACCCTGTATCCCAAGGAACACGAAGCGCAAAGCAACGCCTCTTTGGATGTGTTCCTGGGCCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000535233.6
ENST00000536053.6
ENST00000540394.5
ENST00000602298.2
ENST00000647956.2
ENST00000648162.1
ENST00000649804.1
ENST00000671826.1
ENST00000671919.1
ENST00000671968.1
ENST00000672248.1
ENST00000672297.1
ENST00000672909.1
ENST00000673372.1
CDS CAA 72 bp GCCCATCACCCTTACTCACATTTCTCAAGGCCCGTGTaGAATCCTGGGCTCTCCCGACAGCGTCTTCGTGCA +
Preference number: 6 (lower is better)
Translates to: AHHPYSHFSRPV*NPGLSRQRLRA
Trigger: TGCACGAAGACGCTGTCGGGAGAGCCCAGGATTCAACACGGGCCTTGAGAAATGTGAGTAAGGGTGATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540394.5
ENST00000672297.1
CDS CAA 72 bp TCCACACAGGAGTGGGAGGCAATACCAAGACATCTCTaGGCTCCCCCATGGATGTGGCTCCCCCATGGATGT +
Preference number: 6 (lower is better)
Translates to: STQEWEAIPRHL*APPWMWLPHGC
Trigger: ACATCCATGGGGGAGCCACATCCATGGGGGAGCCAAGAGATGTCTTGGTATTGCCTCCCACTCCTGTGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000602298.2
ENST00000672248.1
CDS TCA 72 bp GGATTAGCTACGGGCAGACGGACAAACCTGAGGTCATaGGCAATCTTCTCCTCCATGACCCCGAAGCCACTG +
Preference number: 6 (lower is better)
Translates to: GLATGRRTNLRS*AIFSSMTPKPL
Trigger: CAGTGGCTTCGGGGTCATGGAGGAGAAGATTGCTCATGACCTCAGGTTTGTCCGTCTGCCCGTAGCTAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000535233.6
ENST00000536053.6
ENST00000540394.5
ENST00000602298.2
ENST00000647956.2
ENST00000648162.1
ENST00000649804.1
ENST00000671826.1
ENST00000671919.1
ENST00000671968.1
ENST00000672248.1
ENST00000672297.1
ENST00000672909.1
ENST00000673372.1
CDS GCA 72 bp GAGGGATGGGGCGTGTGTTGTGTGTGTCCACGCGTGTaGACAGTGGAACTGATGAGGTGTGTGAAGAGAGAA +
Preference number: 6 (lower is better)
Translates to: EGWGVCCVCPRV*TVELMRCVKRE
Trigger: TTCTCTCTTCACACACCTCATCAGTTCCACTGTGCACACGCGTGGACACACACAACACACGCCCCATCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540394.5
ENST00000672297.1
CDS CCA 72 bp TCAGCAGAGATATTTCTCAAGGCCCGTGTTGAATCCTaGGCTCTCCCGACAGCGTCTTCGTGCACTGTGTGC +
Preference number: 6 (lower is better)
Translates to: SAEIFLKARVES*ALPTASSCTVC
Trigger: GCACACAGTGCACGAAGACGCTGTCGGGAGAGCCCAGGATTCAACACGGGCCTTGAGAAATATCTCTGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540610.5
ENST00000673318.1
CDS CAA 90 bp AGTGGGTGGTGCAGGCAAGGGAGGGTTGTAATAGGAGCAAAGAGGTaGGTAGTCTCCATTCTTCTGGACCCAGGACACCCACCCAATCCT +
Preference number: 6 (lower is better)
Translates to: SGWCRQGRVVIGAKR*VVSILLDPGHPPNP
Trigger: AGGATTGGGTGGGTGTCCTGGGTCCAGAAGAATGGAGACTACCAACCTCTTTGCTCCTATTACAACCCTCCCTTGCCTGCACCACCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602298.2
ENST00000672248.1
CDS TCA 72 bp ATTCAGGAAGGAGGGTTAAGCTTCTGCTGGGAGACCTaGGTAGTGGCTCTGATCTTAGGGAGGTCACTCACC +
Preference number: 6 (lower is better)
Translates to: IQEGGLSFCWET*VVALILGRSLT
Trigger: GGTGAGTGACCTCCCTAAGATCAGAGCCACTACTCAGGTCTCCCAGCAGAAGCTTAACCCTCCTTCCTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000543362.5
ENST00000543851.1
ENST00000671834.1
ENST00000672184.1
CDS GCA 72 bp CATTTGTGTGGCCCAGGAACACATCCAAAGAGGCGTTaGTTTGCGCTTCGTGTTCCTTGGGATACAGGGTGT +
Preference number: 6 (lower is better)
Translates to: HLCGPGTHPKRR*FALRVPWDTGC
Trigger: ACACCCTGTATCCCAAGGAACACGAAGCGCAAAGCAACGCCTCTTTGGATGTGTTCCTGGGCCACACAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000535233.6
ENST00000536053.6
ENST00000540394.5
ENST00000602298.2
ENST00000647956.2
ENST00000648162.1
ENST00000649804.1
ENST00000671826.1
ENST00000671919.1
ENST00000671968.1
ENST00000672248.1
ENST00000672297.1
ENST00000672909.1
ENST00000673372.1
CDS CCA 72 bp CTCCCTGCTGCCAGCTCTGGTCTGCATCTTGTAATATaGCTCATGGCAGTAGTACTGGATACGGGCCTTGTA +
Preference number: 6 (lower is better)
Translates to: LPAASSGLHLVI*LMAVVLDTGLV
Trigger: TACAAGGCCCGTATCCAGTACTACTGCCATGAGCCATATTACAAGATGCAGACCAGAGCTGGCAGCAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000535233.6
ENST00000536053.6
ENST00000540394.5
ENST00000602298.2
ENST00000647956.2
ENST00000648162.1
ENST00000671919.1
ENST00000671968.1
ENST00000672248.1
ENST00000672297.1
ENST00000672909.1
ENST00000673372.1
CDS CCA 72 bp GTGAAAAGGGATCCCCATGACCCAATTCTAGTTGTGTaGGAACTTACCCAGCCCATGGGTGATGTTGGCCGT +
Preference number: 6 (lower is better)
Translates to: VKRDPHDPILVV*ELTQPMGDVGR
Trigger: ACGGCCAACATCACCCATGGGCTGGGTAAGTTCCCACACAACTAGAATTGGGTCATGGGGATCCCTTTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540394.5
ENST00000672297.1
CDS CAA 72 bp TGCAGGCAAGGGAGGGTTGTAATAGGAGCAAAGAGGTaGGTAGTCTCCATTCTTCTGGACCCAGGACACCCA +
Preference number: 6 (lower is better)
Translates to: CRQGRVVIGAKR*VVSILLDPGHP
Trigger: TGGGTGTCCTGGGTCCAGAAGAATGGAGACTACCAACCTCTTTGCTCCTATTACAACCCTCCCTTGCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602298.2
ENST00000672248.1
CDS CAA 72 bp TTCCAGCAACTCGGGTGGCTGAGGCACTTGAATAGCTaGAATCCAGGAGAAACACTTGAACTTGGGAGGCGG +
Preference number: 6 (lower is better)
Translates to: FQQLGWLRHLNS*NPGETLELGRR
Trigger: CCGCCTCCCAAGTTCAAGTGTTTCTCCTGGATTCAAGCTATTCAAGTGCCTCAGCCACCCGAGTTGCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602298.2
ENST00000672248.1
CDS TCA 72 bp TTTCTTATCAGCAGAGATATTTCTCAAGGCCCGTGTTaGATCCTGGGCTCTCCCGACAGCGTCTTCGTGCAC +
Preference number: 6 (lower is better)
Translates to: FLISRDISQGPC*ILGSPDSVFVH
Trigger: GTGCACGAAGACGCTGTCGGGAGAGCCCAGGATTCAACACGGGCCTTGAGAAATATCTCTGCTGATAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540610.5
ENST00000673318.1
CDS TCA 72 bp CATTCTTCTGGACCCAGGACACCCACCCAATCCTCCTaGTGGAGCTGGAAGCACCTTGGAGTAAAGAACAAT +
Preference number: 6 (lower is better)
Translates to: HSSGPRTPTQSS*WSWKHLGVKNN
Trigger: ATTGTTCTTTACTCCAAGGTGCTTCCAGCTCCATCAGGAGGATTGGGTGGGTGTCCTGGGTCCAGAAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602298.2
ENST00000672248.1
CDS CCA 72 bp CTAACTGATAGACCTGATCATCCTCTCTCTAGACTGTaGCCTGTTCCTACTGAGGTCCAGTTGAATCCCACA +
Preference number: 6 (lower is better)
Translates to: LTDRPDHPLSRL*PVPTEVQLNPT
Trigger: TGTGGGATTCAACTGGACCTCAGTAGGAACAGGCCACAGTCTAGAGAGAGGATGATCAGGTCTATCAGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602298.2
ENST00000672248.1
CDS CAA 72 bp GCTGGAGACGTTGATGTATGTGAAGTGCTGTTGCTATaGAGCAGGGACAAGACTAGGAAATGGCAGTCTTTG +
Preference number: 6 (lower is better)
Translates to: AGDVDVCEVLLL*SRDKTRKWQSL
Trigger: CAAAGACTGCCATTTCCTAGTCTTGTCCCTGCTCAATAGCAACAGCACTTCACATACATCAACGTCTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602298.2
ENST00000672248.1
CDS CAA 72 bp AAAGGTGCTGGAGACGTTGATGTATGTGAAGTGCTGTaGCTATTGAGCAGGGACAAGACTAGGAAATGGCAG +
Preference number: 6 (lower is better)
Translates to: KGAGDVDVCEVL*LLSRDKTRKWQ
Trigger: CTGCCATTTCCTAGTCTTGTCCCTGCTCAATAGCAACAGCACTTCACATACATCAACGTCTCCAGCACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602298.2
ENST00000672248.1
CDS CAA 90 bp GCAGCTTTGAAAGGTGCTGGAGACGTTGATGTATGTGAAGTGCTGTaGCTATTGAGCAGGGACAAGACTAGGAAATGGCAGTCTTTGAAA +
Preference number: 6 (lower is better)
Translates to: AALKGAGDVDVCEVL*LLSRDKTRKWQSLK
Trigger: TTTCAAAGACTGCCATTTCCTAGTCTTGTCCCTGCTCAATAGCAACAGCACTTCACATACATCAACGTCTCCAGCACCTTTCAAAGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602298.2
ENST00000672248.1
CDS TCA 72 bp CTGGAAGCACCTTGGAGTAAAGAACAATGCATCAGGTaGACTCGACTTGATGCAACATTCAAATGTGAGCTC +
Preference number: 6 (lower is better)
Translates to: LEAPWSKEQCIR*TRLDATFKCEL
Trigger: GAGCTCACATTTGAATGTTGCATCAAGTCGAGTTCACCTGATGCATTGTTCTTTACTCCAAGGTGCTTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602298.2
ENST00000672248.1
CDS CAA 72 bp CTTGGAGTAAAGAACAATGCATCAGGTGAACTCGACTaGATGCAACATTCAAATGTGAGCTCCACAAAGGCT +
Preference number: 6 (lower is better)
Translates to: LGVKNNASGELD*MQHSNVSSTKA
Trigger: AGCCTTTGTGGAGCTCACATTTGAATGTTGCATCAAGTCGAGTTCACCTGATGCATTGTTCTTTACTCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000602298.2
ENST00000672248.1