RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C1QTNF7 (Homo sapiens)

Ensembl gene IDs: ENSG00000163145

Ensembl transcript IDs: ENST00000295297.4, ENST00000382383.7, ENST00000397700.6, ENST00000429690.5, ENST00000444304.3, ENST00000510958.1, ENST00000512144.1

Found 389 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGAGCACCTCTGCCCGGCCGCCCCTCTGTCTGGGAAGTGAAGAGTaGCTCTGGCCAGCCGCCGCACCATCTGGGAAGTGGGGAGCACCT +
Preference number: 1 (lower is better)
Translates to: RSTSARPPLCLGSEE*LWPAAAPSGKWGAP
Trigger: AGGTGCTCCCCACTTCCCAGATGGTGCGGCGGCTGGCCAGAGGCACTCTTCACTTCCCAGACAGAGGGGCGGCCGGGCAGAGGTGCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR GCA 90 bp GGGTCTCTGTTCTCACTTCGTCCCCATCATTACCTCTGTCTCAAGTaGGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATG +
Preference number: 1 (lower is better)
Translates to: GSLFSLRPHHYLCLK*AFPQLVPLQVSPIM
Trigger: CATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACGAAGTGAGAACAGAGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR TCA 90 bp CCTGCCAGGCCTCCTCTGTCTCTAGATTTTTCACCCCTTTGCTGTTaGGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCAGTGC +
Preference number: 1 (lower is better)
Translates to: PARPPLSLDFSPLCC*EYQSCIEGAKRMQC
Trigger: GCACTGCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTGAAAAATCTAGAGACAGAGGAGGCCTGGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR TCA 90 bp CCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCAATaGGCAGAGAGGATTTCCCTATCCCTTCTCTGTCACATCCTAATT +
Preference number: 1 (lower is better)
Translates to: PNLCHSKCHPSCKAQ*AERISLSLLCHILI
Trigger: AATTAGGATGTGACAGAGAAGGGATAGGGAAATCCTCTCTGCTCATTGGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR TCA 90 bp AAGAACAAGGTGCTGACACAAGCAAGAGTGGGACTAAGGGAGGTGTaGGACTTGGAAGGGATATCTGTTTACTCAGACATTTGGCTCTCT +
Preference number: 1 (lower is better)
Translates to: KNKVLTQARVGLREV*DLEGISVYSDIWLS
Trigger: AGAGAGCCAAATGTCTGAGTAAACAGATATCCCTTCCAAGTCTCACACCTCCCTTAGTCCCACTCTTGCTTGTGTCAGCACCTTGTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR TCA 90 bp CCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTaGTTCTCCTTCTGGGTCTCTGTTCTCACTTCGTCCCCATCATTA +
Preference number: 1 (lower is better)
Translates to: PILRLAFKALTNMVH*FSFWVSVLTSSPSL
Trigger: TAATGATGGGGACGAAGTGAGAACAGAGACCCAGAAGGAGAATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCCTGGGAAGTGAAGAGTaGCTCTGGCCAGCCGCCGCA +
Preference number: 2 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPLGSEE*LWPAAA
Trigger: TGCGGCGGCTGGCCAGAGGCACTCTTCACTTCCCAG...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCGTCAGAGCTGGCTCCTaGACCCTCTGGGAAGTGAGG +
Preference number: 2 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPVRAGS*TLWEVR
Trigger: CCTCACTTCCCAGAGGGTGCAGGAGCCAGCTCTGAC...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCGCACCATCTGGGAAGTaGGGAGCACCTTTGCCCAGC +
Preference number: 2 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLAPSGK*GAPLPS
Trigger: GCTGGGCAAAGGTGCTCCCCACTTCCCAGATGGTGC...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCAGTGAGGAGCACCTCTaGCCGGCCGCCCCTCTGTCT +
Preference number: 2 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGSEEHL*PAAPLS
Trigger: AGACAGAGGGGCGGCCGGGCAGAGGTGCTCCTCACT...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR TCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCGGACTAAGGGAGGTGTaGGACTTGGAAGGGATATCT +
Preference number: 2 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLGLREV*DLEGIS
Trigger: AGATATCCCTTCCAAGTCTCACACCTCCCTTAGTCC...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR TCA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCAAGAGAATGCAGTGCTaGATTCCTCATTCCCTTTGC +
Preference number: 2 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPKRMQC*IPHSLC
Trigger: GCAAAGGGAATGAGGAATTCAGCACTGCATTCTCTT...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR TCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCTCATGTAAGGCCCAATaGGCAGAGAGGATTTCCCTA +
Preference number: 2 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLSCKAQ*AERISL
Trigger: TAGGGAAATCCTCTCTGCTCATTGGGCCTTACATGA...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCATTCCTCATTCCCTTTaGATCCATCACACCCCCTTA +
Preference number: 2 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPIPHSL*IHHTPL
Trigger: TAAGGGGGTGTGATGGATGCAAAGGGAATGAGGAAT...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCGTCAGAGCTGGCTCCTaGACCCTCTGGGAAGTGAGG +
Preference number: 2 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGVRAGS*TLWEVR
Trigger: CCTCACTTCCCAGAGGGTGCAGGAGCCAGCTCTGAC...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCATTCCTCATTCCCTTTaGATCCATCACACCCCCTTA +
Preference number: 2 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLIPHSL*IHHTPL
Trigger: TAAGGGGGTGTGATGGATGCAAAGGGAATGAGGAAT...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCAGGGTGCAAAGAGAATaGAGTGCTGAATTCCTCATT +
Preference number: 2 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPRVQRE*SAEFLI
Trigger: AATGAGGAATTCAGCACTGCATTCTCTTTGCACCCT...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGCTGGGAAGTGAAGAGTaGCTCTGGCCAGCCGCCGCA +
Preference number: 2 (lower is better)
Translates to: INDLEIPLCMQGHKETFVLGSEE*LWPAAA
Trigger: TGCGGCGGCTGGCCAGAGGCACTCTTCACTTCCCAG...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCTTTGCCCAGCCGCCATaGAACCCTCCAAGTGTGAAG +
Preference number: 2 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGFAQPP*NPPSVK
Trigger: CTTCACACTTGGAGGGTTGCATGGCGGCTGGGCAAA...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTCTGGGAAGTGAAGAGTaGCTCTGGCCAGCCGCCGCA +
Preference number: 2 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLILGSEE*LWPAAA
Trigger: TGCGGCGGCTGGCCAGAGGCACTCTTCACTTCCCAG...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CCA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGGGCTCCTGCACCCTCTaGGAAGTGAGGAGCACCTCT +
Preference number: 2 (lower is better)
Translates to: INDLEIPLCMQGHKETFVGSCTL*EVRSTS
Trigger: AGAGGTGCTCCTCACTTCCCAGAGGGTGCAGGAGCC...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR TCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCAAATGCTTTAGAATCTaGGTGGGAGTCTCTTTGGAT +
Preference number: 2 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLKCFRI*VGVSLD
Trigger: ATCCAAAGAGACTCCCACTCAGATTCTAAAGCATTT...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCCTTTCCCCCAACTTGTaGCACTCCAAGTGTCACCCA +
Preference number: 2 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGLSPNL*HSKCHP
Trigger: TGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAG...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTAGCCGCCGCACCATCTaGGAAGTGGGGAGCACCTTT +
Preference number: 2 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLISRRTI*EVGSTF
Trigger: AAAGGTGCTCCCCACTTCCCAGATGGTGCGGCGGCT...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR TCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCGGACTAAGGGAGGTGTaGGACTTGGAAGGGATATCT +
Preference number: 2 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGGLREV*DLEGIS
Trigger: AGATATCCCTTCCAAGTCTCACACCTCCCTTAGTCC...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR TCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCCAGAATCTAGCATGGTaGTTCAAACATAAGAGGTAT +
Preference number: 2 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLQNLAW*FKHKRY
Trigger: ATACCTCTTATGTTTGAATCACCATGCTAGATTCTG...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCCATTTTTATCACCCCTaGCAGGCCTCCTCTGTCTCT +
Preference number: 2 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGHFYHP*QASSVS
Trigger: AGAGACAGAGGAGGCCTGGCAGGGGTGATAAAAATG...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCTACCTCTGTCTCAAGTaGGCTTTCCCCCAACTTGTG +
Preference number: 2 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGYLCLK*AFPQLV
Trigger: CACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTA...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CCA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCAATATTATTGCCAACTaGTTTTATCACTCAGGGCAT +
Preference number: 2 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPNIIAN*FYHSGH
Trigger: ATGCCCTGAGTGATAAAACCAGTTGGCAATAATATT...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCAGAAGAATCACCTGCTaGCTATTTCTCTTCATTTCA +
Preference number: 2 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLRRITC*LFLFIS
Trigger: TGAAATGAAGAGAAATAGCCAGCAGGTGATTCTTCT...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR TCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCTCATGTAAGGCCCAATaGGCAGAGAGGATTTCCCTA +
Preference number: 2 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGSCKAQ*AERISL
Trigger: TAGGGAAATCCTCTCTGCTCATTGGGCCTTACATGA...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCTTTGGATCCCATTCCTaGTTGTTCCACCTTCTGGAA +
Preference number: 2 (lower is better)
Translates to: HPFAVENTNHALRVQRECFGSHS*LFHLLE
Trigger: TTCCAGAAGGTGGAACAAGCAGGAATGGGATCCAAA...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGCATTTTTATCACCCCTaGCAGGCCTCCTCTGTCTCT +
Preference number: 2 (lower is better)
Translates to: INDLEIPLCMQGHKETFVHFYHP*QASSVS
Trigger: AGAGACAGAGGAGGCCTGGCAGGGGTGATAAAAATG...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTCTTTCCCCCAACTTGTaGCACTCCAAGTGTCACCCA +
Preference number: 2 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLILSPNL*HSKCHP
Trigger: TGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAG...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR CAA 90 bp TCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATaGATTCTCCTTCTGGGTCTCTGTTCTCACTTCGTCCCCATCATT +
Preference number: 2 (lower is better)
Translates to: SNSQAGFQSSYKYGP*ILLLGLCSHFVPII
Trigger: AATGATGGGGACGAAGTGAGAACAGAGACCCAGAAGGAGAATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR TCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCACATACACCTTGGCATaGTTAGTGTTTTTCCATGCG +
Preference number: 2 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGTYTLA*LVFFHA
Trigger: CGCATGGAAAAACACTAATCATGCCAAGGTGTATGT...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR TCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCATACCAATCATGCATTaGGGGTGCAAAGAGAATGCA +
Preference number: 2 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGIPIMH*GCKENA
Trigger: TGCATTCTCTTTGCACCCTCAATGCATGATTGGTAT...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR TCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCACAAATATGGTCCATTaGTTCTCCTTCTGGGTCTCT +
Preference number: 2 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGTNMVH*FSFWVS
Trigger: AGAGACCCAGAAGGAGAATCAATGGACCATATTTGT...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR CAA 90 bp AGACAGGAAAAGCAAGCCTTGCCTTTGCACACAACTGCTAGATCATaGCAACTTTCATCTGTGGTAATGGCAGTATCCAGCTCTGAAATA +
Preference number: 2 (lower is better)
Translates to: RQEKQALPLHTTARS*QLSSVVMAVSSSEI
Trigger: TATTTCAGAGCTGGATACTGCCATTACCACAGATGAAAGTTGCAATGATCTAGCAGTTGTGTGCAAAGGCAAGGCTTGCTTTTCCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGTTTGGATCCCATTCCTaGTTGTTCCACCTTCTGGAA +
Preference number: 2 (lower is better)
Translates to: INDLEIPLCMQGHKETFVFGSHS*LFHLLE
Trigger: TTCCAGAAGGTGGAACAAGCAGGAATGGGATCCAAA...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGAGGAAAAGCAAGCCTTaGCTTTGCACACAACTGCTA +
Preference number: 2 (lower is better)
Translates to: INDLEIPLCMQGHKETFVRKSKP*LCTQLL
Trigger: TAGCAGTTGTGTGCAAAGGCAAGGCTTGCTTTTCCT...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CCA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGGGGAGGTGTGAGACTTaGAAGGGATATCTGTTTACT +
Preference number: 2 (lower is better)
Translates to: INDLEIPLCMQGHKETFVGRCET*KGYLFT
Trigger: AGTAAACAGATATCCCTTCCAAGTCTCACACCTCCC...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR TCA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTACATACACCTTGGCATaGTTAGTGTTTTTCCATGCG +
Preference number: 2 (lower is better)
Translates to: NHALRVQRECSAEFLIPFTYTLA*LVFFHA
Trigger: CGCATGGAAAAACACTAATCATGCCAAGGTGTATGT...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR TCA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGATACCAATCATGCATTaGGGGTGCAAAGAGAATGCA +
Preference number: 2 (lower is better)
Translates to: INDLEIPLCMQGHKETFVIPIMH*GCKENA
Trigger: TGCATTCTCTTTGCACCCTCAATGCATGATTGGTAT...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR TCA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGTCACCCCTTTGCTGTTaGGAATACCAATCATGCATT +
Preference number: 2 (lower is better)
Translates to: INDLEIPLCMQGHKETFVSPLCC*EYQSCI
Trigger: AATGCATGATTGGTATTCTCAACAGCAAAGGGGTGA...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR TCA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGTTATCTGTAAGCAGGTaGCTACCTCAAACCACCTTT +
Preference number: 2 (lower is better)
Translates to: INDLEIPLCMQGHKETFVLSVSR*LPQTTF
Trigger: AAAGGTGGTTTGAGGTAGTCACCTGCTTACAGATAA...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTCCTTCTCCTGTTCATTaGTCTCATCAGCTTACTCGT +
Preference number: 2 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIPSPVH*SHQLTR
Trigger: ACGAGTAAGCTGATGAGAGCAATGAACAGGAGAAGG...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR CAA 90 bp GTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTaGGGAAACCATCACACTAAAGGATTCAGAAGAATCACCTGCTGG +
Preference number: 2 (lower is better)
Translates to: VVPIFMRKLLGQMFV*GNHHTKGFRRITCW
Trigger: CCAGCAGGTGATTCTTCTGAATCCTTTAGTGTGATGGTTTCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR TCA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTAAATGCTTTAGAATCTaGGTGGGAGTCTCTTTGGAT +
Preference number: 2 (lower is better)
Translates to: NHALRVQRECSAEFLIPFKCFRI*VGVSLD
Trigger: ATCCAAAGAGACTCCCACTCAGATTCTAAAGCATTT...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR TCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCAAGAGAATGCAGTGCTaGATTCCTCATTCCCTTTGC +
Preference number: 2 (lower is better)
Translates to: KRIIEELQFSEEQGADTSKRMQC*IPHSLC
Trigger: GCAAAGGGAATGAGGAATTCAGCACTGCATTCTCTT...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR TCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTTCACCCCTTTGCTGTTaGGAATACCAATCATGCATT +
Preference number: 2 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLISPLCC*EYQSCI
Trigger: AATGCATGATTGGTATTCTCAACAGCAAAGGGGTGA...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTAGGGTGCAAAGAGAATaGAGTGCTGAATTCCTCATT +
Preference number: 2 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIRVQRE*SAEFLI
Trigger: AATGAGGAATTCAGCACTGCATTCTCTTTGCACCCT...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGTCTTTCACAGCATTTTaGCCTTATTTCCAGCCTAGA +
Preference number: 2 (lower is better)
Translates to: INDLEIPLCMQGHKETFVSFTAF*PYFQPR
Trigger: TCTAGGCTGGAAATAAGGGCAAAATGCTGTGAAAGA...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCAAGCTCTTACAAATATaGTCCATTGATTCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGKLLQI*SIDSPS
Trigger: AGAAGGAGAATCAATGGACCATATTTGTAAGAGCTT...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CCA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGAATACTCATTGTTCTTaGTCTCCTGTACACATGTCC +
Preference number: 2 (lower is better)
Translates to: INDLEIPLCMQGHKETFVNTHCS*SPVHMS
Trigger: GGACATGTGTACAGGAGACCAAGAACAATGAGTATT...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR CAA 90 bp ATGAGCAGAGAGGATTTCCCTATCCCTTCTCTGTCACATCCTAATTaGGAAGTAAACATTTCCTCTTCTTTCACAGCATTTTGCCCTTAT +
Preference number: 2 (lower is better)
Translates to: MSREDFPIPSLSHPN*EVNISSSFTAFCPY
Trigger: ATAAGGGCAAAATGCTGTGAAAGAAGAGGAAATGTTTACTTCCAAATTAGGATGTGACAGAGAAGGGATAGGGAAATCCTCTCTGCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGATTTGGATCCCATTCCTaGTTGTTCCACCTTCTGGAA +
Preference number: 2 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGFGSHS*LFHLLE
Trigger: TTCCAGAAGGTGGAACAAGCAGGAATGGGATCCAAA...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTTCAAATCCATCTGTTTaGTATGCTGCTCATCACACT +
Preference number: 2 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLISNPSV*YAAHHT
Trigger: AGTGTGATGAGCAGCATAGCAAACAGATGGATTTGA...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGAATTCCTCATTCCCTTTaGATCCATCACACCCCCTTA +
Preference number: 2 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGIPHSL*IHHTPL
Trigger: TAAGGGGGTGTGATGGATGCAAAGGGAATGAGGAAT...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTTCTTTCACAGCATTTTaGCCTTATTTCCAGCCTAGA +
Preference number: 2 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLISFTAF*PYFQPR
Trigger: TCTAGGCTGGAAATAAGGGCAAAATGCTGTGAAAGA...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR TCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCAAATGCTTTAGAATCTaGGTGGGAGTCTCTTTGGAT +
Preference number: 2 (lower is better)
Translates to: KRIIEELQFSEEQGADTSKCFRI*VGVSLD
Trigger: ATCCAAAGAGACTCCCACTCAGATTCTAAAGCATTT...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR TCA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGAATACCAATCATGCATTaGGGGTGCAAAGAGAATGCA +
Preference number: 2 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGIPIMH*GCKENA
Trigger: TGCATTCTCTTTGCACCCTCAATGCATGATTGGTAT...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCTCAAATCCATCTGTTTaGTATGCTGCTCATCACACT +
Preference number: 2 (lower is better)
Translates to: KRIIEELQFSEEQGADTSSNPSV*YAAHHT
Trigger: AGTGTGATGAGCAGCATAGCAAACAGATGGATTTGA...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTTTCAGAAGAATCACCTaGTGGCTATTTCTCTTCATT +
Preference number: 2 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIFRRIT*WLFLFI
Trigger: AATGAAGAGAAATAGCCAGCAGGTGATTCTTCTGAA...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR GCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCTTCAGAAGAATCACCTaGTGGCTATTTCTCTTCATT +
Preference number: 2 (lower is better)
Translates to: KRIIEELQFSEEQGADTSFRRIT*WLFLFI
Trigger: AATGAAGAGAAATAGCCAGCAGGTGATTCTTCTGAA...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTAATATTATTGCCAACTaGTTTTATCACTCAGGGCAT +
Preference number: 2 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLINIIAN*FYHSGH
Trigger: ATGCCCTGAGTGATAAAACCAGTTGGCAATAATATT...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR CAA 90 bp TGCATTCGTGGATTACGATCAGAAGAAAATTTTAATCACAGTGATTaGTGGTTCATGACTGTCTGCAATAACTTCTCCATTTCCAGTTTA +
Preference number: 2 (lower is better)
Translates to: CIRGLRSEENFNHSD*WFMTVCNNFSISSL
Trigger: TAAACTGGAAATGGAGAAGTTATTGCAGACAGTCATGAACCACAAATCACTGTGATTAAAATTTTCTTCTGATCGTAATCCACGAATGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR GCA 72 bp TCTGCCCGGCCGCCCCTCTGTCTGGGAAGTGAAGAGTaGCTCTGGCCAGCCGCCGCACCATCTGGGAAGTGG +
Preference number: 3 (lower is better)
Translates to: SARPPLCLGSEE*LWPAAAPSGKW
Trigger: CCACTTCCCAGATGGTGCGGCGGCTGGCCAGAGGCACTCTTCACTTCCCAGACAGAGGGGCGGCCGGGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CAA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCGGATCCCATTCCTGCTaGTTCCACCTTCTGGAACCC +
Preference number: 3 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPGSHSC*FHLLEP
Trigger: GGGTTCCAGAAGGTGGAACAAGCAGGAATGGGATCC...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CAA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCAAGTGGGGAGCACCTTaGCCCAGCCGCCATGCAACC +
Preference number: 3 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGKWGAP*PSRHAT
Trigger: GGTTGCATGGCGGCTGGGCAAAGGTGCTCCCCACTT...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CAA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCAATACCAATCATGCATaGAGGGTGCAAAGAGAATGC +
Preference number: 3 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPNTNHA*RVQREC
Trigger: GCATTCTCTTTGCACCCTCAATGCATGATTGGTATT...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CAA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCTTCACCCCTTTGCTGTaGAGAATACCAATCATGCAT +
Preference number: 3 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPFTPLL*RIPIMH
Trigger: ATGCATGATTGGTATTCTCAACAGCAAAGGGGTGAA...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR TCA 72 bp TGCCACTCCAAGTGTCACCCATCATGTAAGGCCCAATaGGCAGAGAGGATTTCCCTATCCCTTCTCTGTCAC +
Preference number: 3 (lower is better)
Translates to: CHSKCHPSCKAQ*AERISLSLLCH
Trigger: GTGACAGAGAAGGGATAGGGAAATCCTCTCTGCTCATTGGGCCTTACATGATGGGTGACACTTGGAGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR GCA 72 bp ATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTaGCACTCCAAGTGTCACCCATCATGTAAGGCCCAA +
Preference number: 3 (lower is better)
Translates to: ITSVSSALSPNL*HSKCHPSCKAQ
Trigger: TTGGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR GCA 72 bp TTCTCACTTCGTCCCCATCATTACCTCTGTCTCAAGTaGGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCA +
Preference number: 3 (lower is better)
Translates to: FSLRPHHYLCLK*AFPQLVPLQVS
Trigger: TGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACGAAGTGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CAA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCGGATCCCATTCCTGCTaGTTCCACCTTCTGGAACCC +
Preference number: 3 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGGSHSC*FHLLEP
Trigger: GGGTTCCAGAAGGTGGAACAAGCAGGAATGGGATCC...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CAA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCCTGTCACATCCTAATTaGGAAGTAAACATTTCCTCT +
Preference number: 3 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPLSHPN*EVNISS
Trigger: AGAGGAAATGTTTACTTCCAAATTAGGATGTGACAG...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CAA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCAAGCAAGCCTTGCCTTaGCACACAACTGCTAGATCA +
Preference number: 3 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGKQALP*HTTARS
Trigger: TGATCTAGCAGTTGTGTGCAAAGGCAAGGCTTGCTT...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CAA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGCAGGAAAAGCAAGCCTaGCCTTTGCACACAACTGCT +
Preference number: 3 (lower is better)
Translates to: INDLEIPLCMQGHKETFVQEKQA*PLHTTA
Trigger: AGCAGTTGTGTGCAAAGGCAAGGCTTGCTTTTCCTG...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR TCA 72 bp AGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTaGTTCTCCTTCTGGGTCTCTGTTCTCACTTCGTCC +
Preference number: 3 (lower is better)
Translates to: RLAFKALTNMVH*FSFWVSVLTSS
Trigger: GGACGAAGTGAGAACAGAGACCCAGAAGGAGAATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CAA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCTACAAATATGGTCCATaGATTCTCCTTCTGGGTCTC +
Preference number: 3 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGYKYGP*ILLLGL
Trigger: GAGACCCAGAAGGAGAATCAATGGACCATATTTGTA...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR TCA 72 bp TTCACCCCTTTGCTGTTGAGAATACCAATCATGCATTaGGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCA +
Preference number: 3 (lower is better)
Translates to: FTPLLLRIPIMH*GCKENAVLNSS
Trigger: TGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR TCA 72 bp CCTCCTCTGTCTCTAGATTTTTCACCCCTTTGCTGTTaGGAATACCAATCATGCATTGAGGGTGCAAAGAGA +
Preference number: 3 (lower is better)
Translates to: PPLSLDFSPLCC*EYQSCIEGAKR
Trigger: TCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTGAAAAATCTAGAGACAGAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CAA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCGGACAAATGTTTGTCTaGGGAAACCATCACACTAAA +
Preference number: 3 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGGQMFV*GNHHTK
Trigger: TTTAGTGTGATGGTTTCCCAAGACAAACATTTGTCC...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR TCA 72 bp TTGTGCATGCAGGGGCACAAAGAAACATTTGTGGCCTaGAAATGTGTAACACAGGCACATTCATGTTCATGT +
Preference number: 3 (lower is better)
Translates to: LCMQGHKETFVA*KCVTQAHSCSC
Trigger: ACATGAACATGAATGTGCCTGTGTTACACATTTTCAGGCCACAAATGTTTCTTTGTGCCCCTGCATGCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR GCA 72 bp ATAGGGTTGAAAGACAGGAAAAGCAAGCCTTGCCTTTaGACACAACTGCTAGATCATTGCAACTTTCATCTG +
Preference number: 3 (lower is better)
Translates to: IGLKDRKSKPCL*TQLLDHCNFHL
Trigger: CAGATGAAAGTTGCAATGATCTAGCAGTTGTGTGCAAAGGCAAGGCTTGCTTTTCCTGTCTTTCAACCCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CAA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGTTCAAATCCATCTGTTaGCTATGCTGCTCATCACAC +
Preference number: 3 (lower is better)
Translates to: INDLEIPLCMQGHKETFVFKSIC*LCCSSH
Trigger: GTGTGATGAGCAGCATAGCAAACAGATGGATTTGAA...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CAA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCTCCTTCTCCTGTTCATaGCTCTCATCAGCTTACTCG +
Preference number: 3 (lower is better)
Translates to: KRIIEELQFSEEQGADTSSFSCS*LSSAYS
Trigger: CGAGTAAGCTGATGAGAGCAATGAACAGGAGAAGGA...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CAA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGTACAAATATGGTCCATaGATTCTCCTTCTGGGTCTC +
Preference number: 3 (lower is better)
Translates to: INDLEIPLCMQGHKETFVYKYGP*ILLLGL
Trigger: GAGACCCAGAAGGAGAATCAATGGACCATATTTGTA...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR TCA 72 bp AATACTCATTGTTCTTGGTCTCCTGTACACATGTCCTaGCTCAGAAGGAGAGCAATAAGTGCACAAAGTATG +
Preference number: 3 (lower is better)
Translates to: NTHCSWSPVHMS*LRRRAISAQSM
Trigger: CATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGAGACCAAGAACAATGAGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CAA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGAGATTTTTCACCCCTTaGCTGTTGAGAATACCAATC +
Preference number: 3 (lower is better)
Translates to: INDLEIPLCMQGHKETFVRFFTP*LLRIPI
Trigger: GATTGGTATTCTCAACAGCAAAGGGGTGAAAAATCT...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CAA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGGGACAAATGTTTGTCTaGGGAAACCATCACACTAAA +
Preference number: 3 (lower is better)
Translates to: INDLEIPLCMQGHKETFVGQMFV*GNHHTK
Trigger: TTTAGTGTGATGGTTTCCCAAGACAAACATTTGTCC...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CAA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGATAGCCTTTCGAGAATaGTCAAAGATTTTGGGATGT +
Preference number: 3 (lower is better)
Translates to: INDLEIPLCMQGHKETFVIAFRE*SKILGC
Trigger: ACATCCCAAAATCTTTGACAATTCTCGAAAGGCTAT...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CAA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTATAGCCTTTCGAGAATaGTCAAAGATTTTGGGATGT +
Preference number: 3 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIIAFRE*SKILGC
Trigger: ACATCCCAAAATCTTTGACAATTCTCGAAAGGCTAT...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CAA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGATTCACCCCTTTGCTGTaGAGAATACCAATCATGCAT +
Preference number: 3 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGFTPLL*RIPIMH
Trigger: ATGCATGATTGGTATTCTCAACAGCAAAGGGGTGAA...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR-3UTR CAA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGAAGATTTTTCACCCCTTaGCTGTTGAGAATACCAATC +
Preference number: 3 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGRFFTP*LLRIPI
Trigger: GATTGGTATTCTCAACAGCAAAGGGGTGAAAAATCT...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCGCACCCTCTGGGAAGTaGGGAGCACCTCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPAPSGK*GAPLPG
Trigger: GCCGGGCAGAGGTGCTCCTCACTTCCCAGAGGGTGC...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCGCACCATCTGGGAAGTaGGGAGCACCTTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPAPSGK*GAPLPS
Trigger: GCTGGGCAAAGGTGCTCCCCACTTCCCAGATGGTGC...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCAGCCGCCGCACCATCTaGGAAGTGGGGAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPSRRTI*EVGSTF
Trigger: AAAGGTGCTCCCCACTTCCCAGATGGTGCGGCGGCT...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCCTGGCTGCAGATAGATaGCTGTGGACCCCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLLAADR*LWTPKP
Trigger: TGGCTTCGGGGTCCACAGTCATCTATCTGCAGCCAG...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCCGATGCTTCCACATCTaGAAACTCCAGGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLRCFHI*KLQAAP
Trigger: CGGGGCTGCCTGGAGTTTGCAGATGTGGAAGCATCG...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCTTTGCCCAGCCGCCATaGAACCCTCCAAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPFAQPP*NPPSVK
Trigger: CTTCACACTTGGAGGGTTGCATGGCGGCTGGGCAAA...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCCCCGAAGCCACATCATaGTTTCCTGTGTTGGCGTCG +
Preference number: 4 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPPEATS*FPVLAS
Trigger: CGACGCCAACACAGGAAACCATGATGTGGCTTCGGG...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCCCCGGGGTTGTCCACTaGCACAAATGGCAAAACTTG +
Preference number: 4 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPPGVVH*HKWQNL
Trigger: CAAGTTTTGCCATTTGTGCCAGTGGACAACCCCGGG...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCTCTACCATCTCTTCCTaGAAGGCCGATGCGACCATG +
Preference number: 4 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPSTISS*KADATM
Trigger: CATGGTCGCATCGGCCTTCCAGGAAGAGATGGTAGA...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCTTTACTAGTCAGAGCTaGCTCCTGCACCCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPFTSQS*LLHPLG
Trigger: TCCCAGAGGGTGCAGGAGCCAGCTCTGACTAGTAAA...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATGCACCCTCTGGGAAGTaGGGAGCACCTCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHAPSGK*GAPLPG
Trigger: GCCGGGCAGAGGTGCTCCTCACTTCCCAGAGGGTGC...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCGCAAGCCAGGAATGCTaGAGATATACCTGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLASQEC*RYTWGS
Trigger: ACTCCCCCAGGTATATCTGCAGCATTCCTGGCTTGC...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCCCCAGGGGAACCATTTaGTCCAGGGGGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: HPFAVENTNHALRVQRECPRGTI*SRGPWR
Trigger: CCTCCAGGGCCCCCTGGAGCAAATGGTTCCCCTGGG...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCTTCCTGGAAGGCCGATaGGACCATGGGGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: HPFAVENTNHALRVQRECFLEGR*DHGAQG
Trigger: CCCCTGGGCCCCATGGTCGCATCGGCCTTCCAGGAA...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCAGTGAGGAGCACCTCTaGCCGGCCGCCCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: HPFAVENTNHALRVQRECSEEHL*PAAPLS
Trigger: AGACAGAGGGGCGGCCGGGCAGAGGTGCTCCTCACT...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCTCCTCTGTCTCCCTTTaGTCCAGGAGGACCAATTGG +
Preference number: 4 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLSSVSL*SRRTNW
Trigger: CCAATTGGTCCTCCTGGACCAAAGGGAGACAGAGGA...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCGCTCTTGCTCTTAGATaGTGGGCTGCTGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLALALR*WAAAGF
Trigger: GAATCCTGCAGCAGCCCACCATCTAAGAGCAAGAGC...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444304.3
CDS-3UTR TCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCTTCTCTCCTTTCAACTaGTTACCCCGGGGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLFSPFN*LPRGCP
Trigger: TGGACAACCCCGGGGTAATCAGTTGAAAGGAGAGAA...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCGGCAGTATCCAGCTCTaGAATACACAGGGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLGSIQL*NTQGLY
Trigger: GTAGAGACCCTGTGTATTTCAGAGCTGGATACTGCC...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATTTCCTGGAAGGCCGATaGGACCATGGGGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHFLEGR*DHGAQG
Trigger: CCCCTGGGCCCCATGGTCGCATCGGCCTTCCAGGAA...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCTACCTAGCAGATCCATaGGAAGCAATGTCTTACCAC +
Preference number: 4 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPYLADP*EAMSYH
Trigger: GTGGTAAGACATTGCTTCTCATGGATCTGCTAGGTA...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCCCTGTACACATGTCCTaGCTCAGAAGGAGAGCAATA +
Preference number: 4 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLPVHMS*LRRRAI
Trigger: TATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGG...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTAGTGAGGAGCACCTCTaGCCGGCCGCCCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: NHALRVQRECSAEFLIPFSEEHL*PAAPLS
Trigger: AGACAGAGGGGCGGCCGGGCAGAGGTGCTCCTCACT...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCCTGGAAATACCCTTGTaGATGCAGGGGCACAAAGAA +
Preference number: 4 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLLEIPL*MQGHKE
Trigger: TTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAG...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCTGCTGCAGATATACCTaGGGGAGTAGTTCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLCCRYT*GSSSLL
Trigger: AAGGAGAGAACTACTCCCCCAGGTATATCTGCAGCA...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCAGGCCGATGCGACCATaGGGCCCAGGGGAACCATTT +
Preference number: 4 (lower is better)
Translates to: HPFAVENTNHALRVQRECRPMRP*GPGEPF
Trigger: AAATGGTTCCCCTGGGCCCCATGGTCGCATCGGCCT...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCGCACCATCTGGGAAGTaGGGAGCACCTTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGAPSGK*GAPLPS
Trigger: GCTGGGCAAAGGTGCTCCCCACTTCCCAGATGGTGC...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCGGCTCCTGCACCCTCTaGGAAGTGAGGAGCACCTCT +
Preference number: 4 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGGSCTL*EVRSTS
Trigger: AGAGGTGCTCCTCACTTCCCAGAGGGTGCAGGAGCC...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTCCAGGCTTTGAGCGGTaGCAGAGAGAGGGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: NHALRVQRECSAEFLIPFPGFER*QREGAG
Trigger: GCCCGCTCCCTCTCTCTGCCACCGCTCAAAGCCTGG...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429690.5
CDS-3UTR TCA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCACATACACCTTGGCATaGTTAGTGTTTTTCCATGCG +
Preference number: 4 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPTYTLA*LVFFHA
Trigger: CGCATGGAAAAACACTAATCATGCCAAGGTGTATGT...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCTACCTAGCAGATCCATaGGAAGCAATGTCTTACCAC +
Preference number: 4 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLYLADP*EAMSYH
Trigger: GTGGTAAGACATTGCTTCTCATGGATCTGCTAGGTA...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTTTCCTGGAAGGCCGATaGGACCATGGGGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIFLEGR*DHGAQG
Trigger: CCCCTGGGCCCCATGGTCGCATCGGCCTTCCAGGAA...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCCCTTCTCCTGTTCATTaGTCTCATCAGCTTACTCGT +
Preference number: 4 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLPSPVH*SHQLTR
Trigger: ACGAGTAAGCTGATGAGAGCAATGAACAGGAGAAGG...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCAGCAAGCCTTGCCTTTaGACACAACTGCTAGATCAT +
Preference number: 4 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLSKPCL*TQLLDH
Trigger: ATGATCTAGCAGTTGTGTGCAAAGGCAAGGCTTGCT...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCAGGAAAAGCAAGCCTTaGCTTTGCACACAACTGCTA +
Preference number: 4 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLRKSKP*LCTQLL
Trigger: TAGCAGTTGTGTGCAAAGGCAAGGCTTGCTTTTCCT...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCAAATACCCTTGTGCATaGAGGGGCACAAAGAAACAT +
Preference number: 4 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPKYPCA*RGTKKH
Trigger: ATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTT...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCCCAGACTTCATCTTCTaGCTGCAGATAGATGACTGT +
Preference number: 4 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLPDFIF*LQIDDC
Trigger: ACAGTCATCTATCTGCAGCCAGAAGATGAAGTCTGG...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCGAGAAGAGGCCATTCTaGTCTGTGAAGAAAATCTCC +
Preference number: 4 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLEKRPF*SVKKIS
Trigger: GGAGATTTTCTTCACAGACCAGAATGGCCTCTTCTC...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCCTCCAATTCTCAGGCTaGCTTTCAAAGCTCTTACAA +
Preference number: 4 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPLQFSG*LSKLLQ
Trigger: TTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAG...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR CAA 72 bp ATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTaGTGCCACTCCAAGTGTCACCCATCATGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: IITSVSSALSPN*CHSKCHPSCKA
Trigger: GGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCCTGGGTAGCTGGTTGTaGTGCCAACAGAAAAGGCGG +
Preference number: 4 (lower is better)
Translates to: HPFAVENTNHALRVQRECLGSWL*CQQKRR
Trigger: CCGCCTTTTCTGTTGGCATCACAACCAGCTACCCAG...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCCTGGGTAGCTGGTTGTaGTGCCAACAGAAAAGGCGG +
Preference number: 4 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGLGSWL*CQQKRR
Trigger: CCGCCTTTTCTGTTGGCATCACAACCAGCTACCCAG...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATTGCCCAACCTGGGTCTaGGAAGAGGCCATTCTGGTC +
Preference number: 4 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHCPTWV*EEAILV
Trigger: GACCAGAATGGCCTCTTCTCAGACCCAGGTTGGGCA...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCATACCAATCATGCATTaGGGGTGCAAAGAGAATGCA +
Preference number: 4 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLIPIMH*GCKENA
Trigger: TGCATTCTCTTTGCACCCTCAATGCATGATTGGTAT...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCCCCAGGGGAACCATTTaGTCCAGGGGGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: KRIIEELQFSEEQGADTSPRGTI*SRGPWR
Trigger: CCTCCAGGGCCCCCTGGAGCAAATGGTTCCCCTGGG...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGAGGCCGATGCGACCATaGGGCCCAGGGGAACCATTT +
Preference number: 4 (lower is better)
Translates to: INDLEIPLCMQGHKETFVRPMRP*GPGEPF
Trigger: AAATGGTTCCCCTGGGCCCCATGGTCGCATCGGCCT...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCCCCGAAGCCACATCATaGTTTCCTGTGTTGGCGTCG +
Preference number: 4 (lower is better)
Translates to: HPFAVENTNHALRVQRECPEATS*FPVLAS
Trigger: CGACGCCAACACAGGAAACCATGATGTGGCTTCGGG...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTAGCCGCCGCACCATCTaGGAAGTGGGGAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: NHALRVQRECSAEFLIPFSRRTI*EVGSTF
Trigger: AAAGGTGCTCCCCACTTCCCAGATGGTGCGGCGGCT...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATCTGGGTAGCTGGTTGTaGTGCCAACAGAAAAGGCGG +
Preference number: 4 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHLGSWL*CQQKRR
Trigger: CCGCCTTTTCTGTTGGCATCACAACCAGCTACCCAG...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATCAGGCAAGCCAGGAATaGTGCAGATATACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHQASQE*CRYTWG
Trigger: CCCCCAGGTATATCTGCAGCATTCCTGGCTTGCCTG...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTGTCAGAGCTGGCTCCTaGACCCTCTGGGAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIVRAGS*TLWEVR
Trigger: CCTCACTTCCCAGAGGGTGCAGGAGCCAGCTCTGAC...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCCTTTCCCCCAACTTGTaGCACTCCAAGTGTCACCCA +
Preference number: 4 (lower is better)
Translates to: HPFAVENTNHALRVQRECLSPNL*HSKCHP
Trigger: TGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAG...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCTGGTTCATGACTGTCTaGAATAACTTCTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLWFMTV*NNFSIS
Trigger: GGAAATGGAGAAGTTATTGCAGACAGTCATGAACCA...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTAGGCCGATGCGACCATaGGGCCCAGGGGAACCATTT +
Preference number: 4 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIRPMRP*GPGEPF
Trigger: AAATGGTTCCCCTGGGCCCCATGGTCGCATCGGCCT...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTGGCTCCTGCACCCTCTaGGAAGTGAGGAGCACCTCT +
Preference number: 4 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIGSCTL*EVRSTS
Trigger: AGAGGTGCTCCTCACTTCCCAGAGGGTGCAGGAGCC...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR CAA 72 bp AATCTGAGTGGGAGTCTCTTTGGATCCCATTCCTGCTaGTTCCACCTTCTGGAACCCCAGATTCAATCAGAG +
Preference number: 4 (lower is better)
Translates to: NLSGSLFGSHSC*FHLLEPQIQSE
Trigger: CTCTGATTGAATCTGGGGTTCCAGAAGGTGGAACAAGCAGGAATGGGATCCAAAGAGACTCCCACTCAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCTTCTCTCCTTTCAACTaGTTACCCCGGGGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGFSPFN*LPRGCP
Trigger: TGGACAACCCCGGGGTAATCAGTTGAAAGGAGAGAA...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCCAGAAAAGGCGGATTTaGGCACGATGCTTCCACATC +
Preference number: 4 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGQKRRI*ARCFHI
Trigger: GATGTGGAAGCATCGTGCTCAAATCCGCCTTTTCTG...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCGGCCATTCTGGTCTGTaGAGAAAATCTCCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGGHSGL*RKSPAR
Trigger: TCTGGCTGGAGATTTTCTTCACAGACCAGAATGGCC...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTTGCCCAACCTGGGTCTaGGAAGAGGCCATTCTGGTC +
Preference number: 4 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLICPTWV*EEAILV
Trigger: GACCAGAATGGCCTCTTCTCAGACCCAGGTTGGGCA...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCTGTTGTACGAAGTTTTaGAACTGTCTTTCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPCCTKF*NCLSQF
Trigger: AAACTGAGAAAGACAGTTGCAAAACTTCGTACAACA...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295297.4
CDS-3UTR GCA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGCAGGCAAGCCAGGAATaGTGCAGATATACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: INDLEIPLCMQGHKETFVQASQE*CRYTWG
Trigger: CCCCCAGGTATATCTGCAGCATTCCTGGCTTGCCTG...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCGTCAGAGCTGGCTCCTaGACCCTCTGGGAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: KRIIEELQFSEEQGADTSVRAGS*TLWEVR
Trigger: CCTCACTTCCCAGAGGGTGCAGGAGCCAGCTCTGAC...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCCATCATCTTCTGATATaGAATCTAGGTAATCTGTGT +
Preference number: 4 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPHHLLI*NLGNLC
Trigger: ACACAGATTACCTAGATTCCATATCAGAAGATGATG...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCGGCTCCTGCACCCTCTaGGAAGTGAGGAGCACCTCT +
Preference number: 4 (lower is better)
Translates to: KRIIEELQFSEEQGADTSGSCTL*EVRSTS
Trigger: AGAGGTGCTCCTCACTTCCCAGAGGGTGCAGGAGCC...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCAATCACAGTGATTTGTaGTTCATGACTGTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLNHSDL*FMTVCN
Trigger: ATTGCAGACAGTCATGAACCACAAATCACTGTGATT...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCCTGGCTGCAGATAGATaGCTGTGGACCCCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: KRIIEELQFSEEQGADTSLAADR*LWTPKP
Trigger: TGGCTTCGGGGTCCACAGTCATCTATCTGCAGCCAG...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATGGCCATTCTGGTCTGTaGAGAAAATCTCCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHGHSGL*RKSPAR
Trigger: TCTGGCTGGAGATTTTCTTCACAGACCAGAATGGCC...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCAACAGCTGGAGTCTTTaGACTCTAGTGTGCGCAGAT +
Preference number: 4 (lower is better)
Translates to: HPFAVENTNHALRVQRECNSWSL*TLVCAD
Trigger: ATCTGCGCACACTAGAGTTCAAAGACTCCAGCTGTT...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429690.5
CDS-3UTR GCA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTGCAAGCCAGGAATGCTaGAGATATACCTGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: NHALRVQRECSAEFLIPFASQEC*RYTWGS
Trigger: ACTCCCCCAGGTATATCTGCAGCATTCCTGGCTTGC...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCCGATGCTTCCACATCTaGAAACTCCAGGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: KRIIEELQFSEEQGADTSRCFHI*KLQAAP
Trigger: CGGGGCTGCCTGGAGTTTGCAGATGTGGAAGCATCG...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTTTTGCCCAGCCGCCATaGAACCCTCCAAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIFAQPP*NPPSVK
Trigger: CTTCACACTTGGAGGGTTGCATGGCGGCTGGGCAAA...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGAGTCAGAGCTGGCTCCTaGACCCTCTGGGAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGVRAGS*TLWEVR
Trigger: CCTCACTTCCCAGAGGGTGCAGGAGCCAGCTCTGAC...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATTACCTCTGTCTCAAGTaGGCTTTCCCCCAACTTGTG +
Preference number: 4 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHYLCLK*AFPQLV
Trigger: CACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTA...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCCTGGAAATACCCTTGTaGATGCAGGGGCACAAAGAA +
Preference number: 4 (lower is better)
Translates to: HPFAVENTNHALRVQRECLEIPL*MQGHKE
Trigger: TTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAG...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTTCTACCATCTCTTCCTaGAAGGCCGATGCGACCATG +
Preference number: 4 (lower is better)
Translates to: NHALRVQRECSAEFLIPFSTISS*KADATM
Trigger: CATGGTCGCATCGGCCTTCCAGGAAGAGATGGTAGA...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCCATCATCTTCTGATATaGAATCTAGGTAATCTGTGT +
Preference number: 4 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLHHLLI*NLGNLC
Trigger: ACACAGATTACCTAGATTCCATATCAGAAGATGATG...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGAGCACCATCTGGGAAGTaGGGAGCACCTTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGAPSGK*GAPLPS
Trigger: GCTGGGCAAAGGTGCTCCCCACTTCCCAGATGGTGC...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTTTCTCTCCTTTCAACTaGTTACCCCGGGGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: NHALRVQRECSAEFLIPFFSPFN*LPRGCP
Trigger: TGGACAACCCCGGGGTAATCAGTTGAAAGGAGAGAA...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGACTGGCTGCAGATAGATaGCTGTGGACCCCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGLAADR*LWTPKP
Trigger: TGGCTTCGGGGTCCACAGTCATCTATCTGCAGCCAG...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCCAGGGATCTTGGTCCTaGTCACAATTCATCATCTTC +
Preference number: 4 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGQGSWS*SQFIIF
Trigger: GAAGATGATGAATTGTGATCAGGACCAAGATCCCTG...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCAAGAGAATGCAGTGCTaGATTCCTCATTCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGKRMQC*IPHSLC
Trigger: GCAAAGGGAATGAGGAATTCAGCACTGCATTCTCTT...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCAAGAGAATGCAGTGCTaGATTCCTCATTCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: HPFAVENTNHALRVQRECKRMQC*IPHSLC
Trigger: GCAAAGGGAATGAGGAATTCAGCACTGCATTCTCTT...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTGGACTAAGGGAGGTGTaGGACTTGGAAGGGATATCT +
Preference number: 4 (lower is better)
Translates to: NHALRVQRECSAEFLIPFGLREV*DLEGIS
Trigger: AGATATCCCTTCCAAGTCTCACACCTCCCTTAGTCC...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGGGCAGTATCCAGCTCTaGAATACACAGGGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: INDLEIPLCMQGHKETFVGSIQL*NTQGLY
Trigger: GTAGAGACCCTGTGTATTTCAGAGCTGGATACTGCC...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGACGATGCTTCCACATCTaGAAACTCCAGGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGRCFHI*KLQAAP
Trigger: CGGGGCTGCCTGGAGTTTGCAGATGTGGAAGCATCG...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCGTGTACCAGTCCGATTaGCAGATGCTTATTAGCCAA +
Preference number: 4 (lower is better)
Translates to: HPFAVENTNHALRVQRECVYQSD*QMLISQ
Trigger: TTGGCTAATAAGCATCTGGCAATCGGACTGGTACAC...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTCATTTTTATCACCCCTaGCAGGCCTCCTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: NHALRVQRECSAEFLIPFHFYHP*QASSVS
Trigger: AGAGACAGAGGAGGCCTGGCAGGGGTGATAAAAATG...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCTTTGCCCAGCCGCCATaGAACCCTCCAAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: KRIIEELQFSEEQGADTSFAQPP*NPPSVK
Trigger: CTTCACACTTGGAGGGTTGCATGGCGGCTGGGCAAA...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCAGCAAGCCTTGCCTTTaGACACAACTGCTAGATCAT +
Preference number: 4 (lower is better)
Translates to: HPFAVENTNHALRVQRECSKPCL*TQLLDH
Trigger: ATGATCTAGCAGTTGTGTGCAAAGGCAAGGCTTGCT...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATTGCTGCAGATATACCTaGGGGAGTAGTTCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHCCRYT*GSSSLL
Trigger: AAGGAGAGAACTACTCCCCCAGGTATATCTGCAGCA...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTTCCTCTGTCTCCCTTTaGTCCAGGAGGACCAATTGG +
Preference number: 4 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLISSVSL*SRRTNW
Trigger: CCAATTGGTCCTCCTGGACCAAAGGGAGACAGAGGA...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATCATGGTTTCCTGTGTTaGCGTCGAAGGTCTTTATCC +
Preference number: 4 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHHGFLC*RRRSLS
Trigger: GGATAAAGACCTTCGACGCCAACACAGGAAACCATG...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCCCCGAAGCCACATCATaGTTTCCTGTGTTGGCGTCG +
Preference number: 4 (lower is better)
Translates to: KRIIEELQFSEEQGADTSPEATS*FPVLAS
Trigger: CGACGCCAACACAGGAAACCATGATGTGGCTTCGGG...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTTTTACTAGTCAGAGCTaGCTCCTGCACCCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIFTSQS*LLHPLG
Trigger: TCCCAGAGGGTGCAGGAGCCAGCTCTGACTAGTAAA...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR CAA 72 bp CAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATaGATTCTCCTTCTGGGTCTCTGTTCTCACTTCGTC +
Preference number: 4 (lower is better)
Translates to: QAGFQSSYKYGP*ILLLGLCSHFV
Trigger: GACGAAGTGAGAACAGAGACCCAGAAGGAGAATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR CAA 72 bp AAGCAAGCCTTGCCTTTGCACACAACTGCTAGATCATaGCAACTTTCATCTGTGGTAATGGCAGTATCCAGC +
Preference number: 4 (lower is better)
Translates to: KQALPLHTTARS*QLSSVVMAVSS
Trigger: GCTGGATACTGCCATTACCACAGATGAAAGTTGCAATGATCTAGCAGTTGTGTGCAAAGGCAAGGCTTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTGGCCATTCTGGTCTGTaGAGAAAATCTCCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIGHSGL*RKSPAR
Trigger: TCTGGCTGGAGATTTTCTTCACAGACCAGAATGGCC...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCTCACCCCTTTGCTGTTaGGAATACCAATCATGCATT +
Preference number: 4 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGSPLCC*EYQSCI
Trigger: AATGCATGATTGGTATTCTCAACAGCAAAGGGGTGA...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCACAAATATGGTCCATTaGTTCTCCTTCTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: HPFAVENTNHALRVQRECTNMVH*FSFWVS
Trigger: AGAGACCCAGAAGGAGAATCAATGGACCATATTTGT...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTCCTGTACACATGTCCTaGCTCAGAAGGAGAGCAATA +
Preference number: 4 (lower is better)
Translates to: NHALRVQRECSAEFLIPFPVHMS*LRRRAI
Trigger: TATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGG...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCTTATCTGTAAGCAGGTaGCTACCTCAAACCACCTTT +
Preference number: 4 (lower is better)
Translates to: HPFAVENTNHALRVQRECLSVSR*LPQTTF
Trigger: AAAGGTGGTTTGAGGTAGTCACCTGCTTACAGATAA...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCGAAACATTTGTGGCCTaGAAATGTGTAACACAGGCA +
Preference number: 4 (lower is better)
Translates to: HPFAVENTNHALRVQRECETFVA*KCVTQA
Trigger: TGCCTGTGTTACACATTTTCAGGCCACAAATGTTTC...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCAAATCCACAAGAGACTaGGGATCTTTCATGAGAGCT +
Preference number: 4 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGKSTRD*GSFMRA
Trigger: AGCTCTCATGAAAGATCCTCAGTCTCTTGTGGATTT...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444304.3
CDS-3UTR GCA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATTTTGGATCCCATTCCTaGTTGTTCCACCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHFGSHS*LFHLLE
Trigger: TTCCAGAAGGTGGAACAAGCAGGAATGGGATCCAAA...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCAGGGTGCAAAGAGAATaGAGTGCTGAATTCCTCATT +
Preference number: 4 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGRVQRE*SAEFLI
Trigger: AATGAGGAATTCAGCACTGCATTCTCTTTGCACCCT...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCCTTTCCCCCAACTTGTaGCACTCCAAGTGTCACCCA +
Preference number: 4 (lower is better)
Translates to: KRIIEELQFSEEQGADTSLSPNL*HSKCHP
Trigger: TGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAG...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATAGGAAAAGCAAGCCTTaGCTTTGCACACAACTGCTA +
Preference number: 4 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHRKSKP*LCTQLL
Trigger: TAGCAGTTGTGTGCAAAGGCAAGGCTTGCTTTTCCT...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCCAAGACAAACATCTTTaGCTCTTGTCTGGACATTGC +
Preference number: 4 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGQDKHL*LLSGHC
Trigger: GCAATGTCCAGACAAGAGCCAAAGATGTTTGTCTTG...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295297.4
3UTR CAA 72 bp TTTCACCCCTTTGCTGTTGAGAATACCAATCATGCATaGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTC +
Preference number: 4 (lower is better)
Translates to: FHPFAVENTNHA*RVQRECSAEFL
Trigger: GAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR CAA 72 bp ACACTGTTCACAATGATAAATGACCTGGAAATACCCTaGTGCATGCAGGGGCACAAAGAAACATTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: TLFTMINDLEIP*CMQGHKETFVA
Trigger: GGCCACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTATCATTGTGAACAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATTCACCCCTTTGCTGTTaGGAATACCAATCATGCATT +
Preference number: 4 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHSPLCC*EYQSCI
Trigger: AATGCATGATTGGTATTCTCAACAGCAAAGGGGTGA...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCGGACTAAGGGAGGTGTaGGACTTGGAAGGGATATCT +
Preference number: 4 (lower is better)
Translates to: KRIIEELQFSEEQGADTSGLREV*DLEGIS
Trigger: AGATATCCCTTCCAAGTCTCACACCTCCCTTAGTCC...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTTCATGTAAGGCCCAATaGGCAGAGAGGATTTCCCTA +
Preference number: 4 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLISCKAQ*AERISL
Trigger: TAGGGAAATCCTCTCTGCTCATTGGGCCTTACATGA...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCAGTCCGATTGCCAGATaGTTATTAGCCAATGTGATA +
Preference number: 4 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGSPIAR*LLANVI
Trigger: TATCACATTGGCTAATAAGCATCTGGCAATCGGACT...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTGTCTTTATCCGGTATTaGCCATTGTGTACCAGTCCG +
Preference number: 4 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIVFIRY*PLCTSP
Trigger: CGGACTGGTACACAATGGGCAATACCGGATAAAGAC...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCTCAAATCCATCTGTTTaGTATGCTGCTCATCACACT +
Preference number: 4 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGSNPSV*YAAHHT
Trigger: AGTGTGATGAGCAGCATAGCAAACAGATGGATTTGA...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTATTCCTCATTCCCTTTaGATCCATCACACCCCCTTA +
Preference number: 4 (lower is better)
Translates to: NHALRVQRECSAEFLIPFIPHSL*IHHTPL
Trigger: TAAGGGGGTGTGATGGATGCAAAGGGAATGAGGAAT...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGATTCCTCATTCCCTTTaGATCCATCACACCCCCTTA +
Preference number: 4 (lower is better)
Translates to: INDLEIPLCMQGHKETFVIPHSL*IHHTPL
Trigger: TAAGGGGGTGTGATGGATGCAAAGGGAATGAGGAAT...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATAGGGTGCAAAGAGAATaGAGTGCTGAATTCCTCATT +
Preference number: 4 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHRVQRE*SAEFLI
Trigger: AATGAGGAATTCAGCACTGCATTCTCTTTGCACCCT...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCTCTTTCACAGCATTTTaGCCTTATTTCCAGCCTAGA +
Preference number: 4 (lower is better)
Translates to: HPFAVENTNHALRVQRECSFTAF*PYFQPR
Trigger: TCTAGGCTGGAAATAAGGGCAAAATGCTGTGAAAGA...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCTACCTCTGTCTCAAGTaGGCTTTCCCCCAACTTGTG +
Preference number: 4 (lower is better)
Translates to: KRIIEELQFSEEQGADTSYLCLK*AFPQLV
Trigger: CACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTA...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATAAATACCCTTGTGCATaGAGGGGCACAAAGAAACAT +
Preference number: 4 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHKYPCA*RGTKKH
Trigger: ATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTT...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGAATGCGTTTGAAGCTTaGAGCTCATGCTGTTGTACG +
Preference number: 4 (lower is better)
Translates to: INDLEIPLCMQGHKETFVNAFEA*SSCCCT
Trigger: CGTACAACAGCATGAGCTCCAAGCTTCAAACGCATT...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295297.4
CDS-3UTR CCA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGATCTACCATCTCTTCCTaGAAGGCCGATGCGACCATG +
Preference number: 4 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGSTISS*KADATM
Trigger: CATGGTCGCATCGGCCTTCCAGGAAGAGATGGTAGA...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTCCAGACTTCATCTTCTaGCTGCAGATAGATGACTGT +
Preference number: 4 (lower is better)
Translates to: NHALRVQRECSAEFLIPFPDFIF*LQIDDC
Trigger: ACAGTCATCTATCTGCAGCCAGAAGATGAAGTCTGG...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTGGGAGGTGTGAGACTTaGAAGGGATATCTGTTTACT +
Preference number: 4 (lower is better)
Translates to: NHALRVQRECSAEFLIPFGRCET*KGYLFT
Trigger: AGTAAACAGATATCCCTTCCAAGTCTCACACCTCCC...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATCTCCAATTCTCAGGCTaGCTTTCAAAGCTCTTACAA +
Preference number: 4 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHLQFSG*LSKLLQ
Trigger: TTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAG...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCAATACTCATTGTTCTTaGTCTCCTGTACACATGTCC +
Preference number: 4 (lower is better)
Translates to: HPFAVENTNHALRVQRECNTHCS*SPVHMS
Trigger: GGACATGTGTACAGGAGACCAAGAACAATGAGTATT...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCCAAGACAAACATCTTTaGCTCTTGCTCTTAGATGGT +
Preference number: 4 (lower is better)
Translates to: HPFAVENTNHALRVQRECQDKHL*LLLLDG
Trigger: ACCATCTAAGAGCAAGAGCCAAAGATGTTTGTCTTG...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444304.3
CDS-3UTR TCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCTCATGTAAGGCCCAATaGGCAGAGAGGATTTCCCTA +
Preference number: 4 (lower is better)
Translates to: KRIIEELQFSEEQGADTSSCKAQ*AERISL
Trigger: TAGGGAAATCCTCTCTGCTCATTGGGCCTTACATGA...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGACAAATATGGTCCATTaGTTCTCCTTCTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: INDLEIPLCMQGHKETFVTNMVH*FSFWVS
Trigger: AGAGACCCAGAAGGAGAATCAATGGACCATATTTGT...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATGTGATTTGTGGTTCATaGCTGTCTGCAATAACTTCT +
Preference number: 4 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHVICGS*LSAITS
Trigger: AGAAGTTATTGCAGACAGTCATGAACCACAAATCAC...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTGAAGCTTGGAGCTCATaGTGTTGTACGAAGTTTTGC +
Preference number: 4 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIEAWSS*CCTKFC
Trigger: GCAAAACTTCGTACAACAGCATGAGCTCCAAGCTTC...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295297.4
CDS-3UTR GCA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATAACATGAGGCTTTCTTaGTTTGGTTGTCCCATGAAT +
Preference number: 4 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHNMRLS*FGCPMN
Trigger: ATTCATGGGACAACCAAAGCAAGAAAGCCTCATGTT...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295297.4
CDS-3UTR GCA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATAGTCCGATTGCCAGATaGTTATTAGCCAATGTGATA +
Preference number: 4 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHSPIAR*LLANVI
Trigger: TATCACATTGGCTAATAAGCATCTGGCAATCGGACT...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCGTCTTTATCCGGTATTaGCCATTGTGTACCAGTCCG +
Preference number: 4 (lower is better)
Translates to: KRIIEELQFSEEQGADTSVFIRY*PLCTSP
Trigger: CGGACTGGTACACAATGGGCAATACCGGATAAAGAC...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCTTCAGAAGAATCACCTaGTGGCTATTTCTCTTCATT +
Preference number: 4 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGFRRIT*WLFLFI
Trigger: AATGAAGAGAAATAGCCAGCAGGTGATTCTTCTGAA...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCTTCAGAAGAATCACCTaGTGGCTATTTCTCTTCATT +
Preference number: 4 (lower is better)
Translates to: HPFAVENTNHALRVQRECFRRIT*WLFLFI
Trigger: AATGAAGAGAAATAGCCAGCAGGTGATTCTTCTGAA...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGATACCTCTGTCTCAAGTaGGCTTTCCCCCAACTTGTG +
Preference number: 4 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGYLCLK*AFPQLV
Trigger: CACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTA...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTAAATACCCTTGTGCATaGAGGGGCACAAAGAAACAT +
Preference number: 4 (lower is better)
Translates to: NHALRVQRECSAEFLIPFKYPCA*RGTKKH
Trigger: ATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTT...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTGAGGCTTTCTTGCTTTaGTTGTCCCATGAATGTAGT +
Preference number: 4 (lower is better)
Translates to: NHALRVQRECSAEFLIPFEAFLL*LSHECS
Trigger: ACTACATTCATGGGACAACCAAAGCAAGAAAGCCTC...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295297.4
CDS-3UTR CCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCTGCTGCAGATATACCTaGGGGAGTAGTTCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: KRIIEELQFSEEQGADTSCCRYT*GSSSLL
Trigger: AAGGAGAGAACTACTCCCCCAGGTATATCTGCAGCA...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCCATGGTTTCCTGTGTTaGCGTCGAAGGTCTTTATCC +
Preference number: 4 (lower is better)
Translates to: KRIIEELQFSEEQGADTSHGFLC*RRRSLS
Trigger: GGATAAAGACCTTCGACGCCAACACAGGAAACCATG...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTATACCAATCATGCATTaGGGGTGCAAAGAGAATGCA +
Preference number: 4 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIIPIMH*GCKENA
Trigger: TGCATTCTCTTTGCACCCTCAATGCATGATTGGTAT...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTACAAATATGGTCCATTaGTTCTCCTTCTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLITNMVH*FSFWVS
Trigger: AGAGACCCAGAAGGAGAATCAATGGACCATATTTGT...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTGAAACATTTGTGGCCTaGAAATGTGTAACACAGGCA +
Preference number: 4 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIETFVA*KCVTQA
Trigger: TGCCTGTGTTACACATTTTCAGGCCACAAATGTTTC...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCGTGTACCAGTCCGATTaGCAGATGCTTATTAGCCAA +
Preference number: 4 (lower is better)
Translates to: KRIIEELQFSEEQGADTSVYQSD*QMLISQ
Trigger: TTGGCTAATAAGCATCTGGCAATCGGACTGGTACAC...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGAGTCTTTATCCGGTATTaGCCATTGTGTACCAGTCCG +
Preference number: 4 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGVFIRY*PLCTSP
Trigger: CGGACTGGTACACAATGGGCAATACCGGATAAAGAC...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGTCAAATCCATCTGTTTaGTATGCTGCTCATCACACT +
Preference number: 4 (lower is better)
Translates to: INDLEIPLCMQGHKETFVSNPSV*YAAHHT
Trigger: AGTGTGATGAGCAGCATAGCAAACAGATGGATTTGA...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTTCTTTCACAGCATTTTaGCCTTATTTCCAGCCTAGA +
Preference number: 4 (lower is better)
Translates to: NHALRVQRECSAEFLIPFSFTAF*PYFQPR
Trigger: TCTAGGCTGGAAATAAGGGCAAAATGCTGTGAAAGA...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCAGCAAGCCTTGCCTTTaGACACAACTGCTAGATCAT +
Preference number: 4 (lower is better)
Translates to: KRIIEELQFSEEQGADTSSKPCL*TQLLDH
Trigger: ATGATCTAGCAGTTGTGTGCAAAGGCAAGGCTTGCT...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTTGGTTCATGACTGTCTaGAATAACTTCTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: NHALRVQRECSAEFLIPFWFMTV*NNFSIS
Trigger: GGAAATGGAGAAGTTATTGCAGACAGTCATGAACCA...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGTCTTTGGCTCTTGTCTaGACATTGCTGATATCAAAC +
Preference number: 4 (lower is better)
Translates to: INDLEIPLCMQGHKETFVSLALV*TLLISN
Trigger: GTTTGATATCAGCAATGTCCAGACAAGAGCCAAAGA...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295297.4
CDS-3UTR CCA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCAATATTATTGCCAACTaGTTTTATCACTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGNIIAN*FYHSGH
Trigger: ATGCCCTGAGTGATAAAACCAGTTGGCAATAATATT...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCGGGAGGTGTGAGACTTaGAAGGGATATCTGTTTACT +
Preference number: 4 (lower is better)
Translates to: KRIIEELQFSEEQGADTSGRCET*KGYLFT
Trigger: AGTAAACAGATATCCCTTCCAAGTCTCACACCTCCC...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATAATCACAGTGATTTGTaGTTCATGACTGTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHNHSDL*FMTVCN
Trigger: ATTGCAGACAGTCATGAACCACAAATCACTGTGATT...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCTTGTCTGGACATTGCTaGTATCAAACTTTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: KRIIEELQFSEEQGADTSLSGHC*YQTFPQ
Trigger: TTGGGGGAAAGTTTGATATCAGCAATGTCCAGACAA...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295297.4
CDS-3UTR TCA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGACAGGGATCTTGGTCCTaGTCACAATTCATCATCTTC +
Preference number: 4 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGQGSWS*SQFIIF
Trigger: GAAGATGATGAATTGTGATCAGGACCAAGATCCCTG...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTAAATGCTTTAGAATCTaGGTGGGAGTCTCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIKCFRI*VGVSLD
Trigger: ATCCAAAGAGACTCCCACTCAGATTCTAAAGCATTT...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGAAAGAGAATGCAGTGCTaGATTCCTCATTCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGKRMQC*IPHSLC
Trigger: GCAAAGGGAATGAGGAATTCAGCACTGCATTCTCTT...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTCAGAATCTAGCATGGTaGTTCAAACATAAGAGGTAT +
Preference number: 4 (lower is better)
Translates to: NHALRVQRECSAEFLIPFQNLAW*FKHKRY
Trigger: ATACCTCTTATGTTTGAATCACCATGCTAGATTCTG...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTGTGATTTGTGGTTCATaGCTGTCTGCAATAACTTCT +
Preference number: 4 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIVICGS*LSAITS
Trigger: AGAAGTTATTGCAGACAGTCATGAACCACAAATCAC...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTAGTCCGATTGCCAGATaGTTATTAGCCAATGTGATA +
Preference number: 4 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLISPIAR*LLANVI
Trigger: TATCACATTGGCTAATAAGCATCTGGCAATCGGACT...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGAGTGTACCAGTCCGATTaGCAGATGCTTATTAGCCAA +
Preference number: 4 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGVYQSD*QMLISQ
Trigger: TTGGCTAATAAGCATCTGGCAATCGGACTGGTACAC...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATAATATTATTGCCAACTaGTTTTATCACTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHNIIAN*FYHSGH
Trigger: ATGCCCTGAGTGATAAAACCAGTTGGCAATAATATT...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGAGGGAGGTGTGAGACTTaGAAGGGATATCTGTTTACT +
Preference number: 4 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGGRCET*KGYLFT
Trigger: AGTAAACAGATATCCCTTCCAAGTCTCACACCTCCC...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATAAGCTCTTACAAATATaGTCCATTGATTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHKLLQI*SIDSPS
Trigger: AGAAGGAGAATCAATGGACCATATTTGTAAGAGCTT...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCAAATCCCCTTCCCTTTaGCAGCGAGGATTATTCATA +
Preference number: 4 (lower is better)
Translates to: KRIIEELQFSEEQGADTSKSPSL*QRGLFI
Trigger: TATGAATAATCCTCGCTGCCAAAGGGAAGGGGATTT...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429690.5
CDS-3UTR TCA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGAACATACACCTTGGCATaGTTAGTGTTTTTCCATGCG +
Preference number: 4 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGTYTLA*LVFFHA
Trigger: CGCATGGAAAAACACTAATCATGCCAAGGTGTATGT...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGATCACCCCTTTGCTGTTaGGAATACCAATCATGCATT +
Preference number: 4 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGSPLCC*EYQSCI
Trigger: AATGCATGATTGGTATTCTCAACAGCAAAGGGGTGA...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGATTATCTGTAAGCAGGTaGCTACCTCAAACCACCTTT +
Preference number: 4 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGLSVSR*LPQTTF
Trigger: AAAGGTGGTTTGAGGTAGTCACCTGCTTACAGATAA...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGAAGGGTGCAAAGAGAATaGAGTGCTGAATTCCTCATT +
Preference number: 4 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGRVQRE*SAEFLI
Trigger: AATGAGGAATTCAGCACTGCATTCTCTTTGCACCCT...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTCATCATCTTCTGATATaGAATCTAGGTAATCTGTGT +
Preference number: 4 (lower is better)
Translates to: NHALRVQRECSAEFLIPFHHLLI*NLGNLC
Trigger: ACACAGATTACCTAGATTCCATATCAGAAGATGATG...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCAATACTCATTGTTCTTaGTCTCCTGTACACATGTCC +
Preference number: 4 (lower is better)
Translates to: KRIIEELQFSEEQGADTSNTHCS*SPVHMS
Trigger: GGACATGTGTACAGGAGACCAAGAACAATGAGTATT...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGAAAATGCTTTAGAATCTaGGTGGGAGTCTCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGKCFRI*VGVSLD
Trigger: ATCCAAAGAGACTCCCACTCAGATTCTAAAGCATTT...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR GCA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGATGGTTCATGACTGTCTaGAATAACTTCTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGWFMTV*NNFSIS
Trigger: GGAAATGGAGAAGTTATTGCAGACAGTCATGAACCA...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCAGAAGAATCACCTGCTaGCTATTTCTCTTCATTTCA +
Preference number: 4 (lower is better)
Translates to: KRIIEELQFSEEQGADTSRRITC*LFLFIS
Trigger: TGAAATGAAGAGAAATAGCCAGCAGGTGATTCTTCT...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTAAGCTCTTACAAATATaGTCCATTGATTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIKLLQI*SIDSPS
Trigger: AGAAGGAGAATCAATGGACCATATTTGTAAGAGCTT...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCAATCACAGTGATTTGTaGTTCATGACTGTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: KRIIEELQFSEEQGADTSNHSDL*FMTVCN
Trigger: ATTGCAGACAGTCATGAACCACAAATCACTGTGATT...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR TCA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGACAGAATCTAGCATGGTaGTTCAAACATAAGAGGTAT +
Preference number: 4 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGQNLAW*FKHKRY
Trigger: ATACCTCTTATGTTTGAATCACCATGCTAGATTCTG...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCAATATTATTGCCAACTaGTTTTATCACTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: KRIIEELQFSEEQGADTSNIIAN*FYHSGH
Trigger: ATGCCCTGAGTGATAAAACCAGTTGGCAATAATATT...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CCA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGAAGAAGAATCACCTGCTaGCTATTTCTCTTCATTTCA +
Preference number: 4 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGRRITC*LFLFIS
Trigger: TGAAATGAAGAGAAATAGCCAGCAGGTGATTCTTCT...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
3UTR CAA 72 bp GGATTACGATCAGAAGAAAATTTTAATCACAGTGATTaGTGGTTCATGACTGTCTGCAATAACTTCTCCATT +
Preference number: 4 (lower is better)
Translates to: GLRSEENFNHSD*WFMTVCNNFSI
Trigger: AATGGAGAAGTTATTGCAGACAGTCATGAACCACAAATCACTGTGATTAAAATTTTCTTCTGATCGTAATCC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCCTTCCCAGTCTCTCCTaGGTCCCCTTTCTCACCGGC +
Preference number: 5 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPLPSLS*VPFLTG
Trigger: GCCGGTGAGAAAGGGGACCAAGGAGAGACTGGGAAG...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS TCA 90 bp ATAAGTAATTTCCTGATTCGCTTTCAAAAGCGTTCTCCCAGGCTTTaGGCGGTGGCAGAGAGAGGGAGCGGGCAAGGACCCCGGCGTGCA +
Preference number: 5 (lower is better)
Translates to: ISNFLIRFQKRSPRL*AVAERGSGQGPRRA
Trigger: TGCACGCCGGGGTCCTTGCCCGCTCCCTCTCTCTGCCACCGCTCAAAGCCTGGGAGAACGCTTTTGAAAGCGAATCAGGAAATTACTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382383.7
ENST00000429690.5
CDS CCA 90 bp TTCTCTCCCTCTGGTCCTATGGGTCCTTTCTTCCCAGTCTCTCCTTaGTCCCCTTTCTCACCGGCAAGACCTAGCGGTCCAGTCTTACCT +
Preference number: 5 (lower is better)
Translates to: FSPSGPMGPFFPVSP*SPFSPARPSGPVLP
Trigger: AGGTAAGACTGGACCGCTAGGTCTTGCCGGTGAGAAAGGGGACCAAGGAGAGACTGGGAAGAAAGGACCCATAGGACCAGAGGGAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295297.4
ENST00000382383.7
ENST00000397700.6
ENST00000429690.5
ENST00000444304.3
CDS CCA 90 bp GAGGACCAATTGGACCTACTTCTCCTTTCTCTCCCTCTGGTCCTATaGGTCCTTTCTTCCCAGTCTCTCCTTGGTCCCCTTTCTCACCGG +
Preference number: 5 (lower is better)
Translates to: EDQLDLLLLSLPLVL*VLSSQSLLGPLSHR
Trigger: CCGGTGAGAAAGGGGACCAAGGAGAGACTGGGAAGAAAGGACCCATAGGACCAGAGGGAGAGAAAGGAGAAGTAGGTCCAATTGGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295297.4
ENST00000397700.6
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCATCCGGTATTGCCCATaGTGTACCAGTCCGATTGCC +
Preference number: 5 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLIRYCP*CTSPIA
Trigger: GGCAATCGGACTGGTACACAATGGGCAATACCGGAT...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCCAGGAAAAGCAAGCCTaGCCTTTGCACACAACTGCT +
Preference number: 5 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPQEKQA*PLHTTA
Trigger: AGCAGTTGTGTGCAAAGGCAAGGCTTGCTTTTCCTG...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCAAGTGGGGAGCACCTTaGCCCAGCCGCCATGCAACC +
Preference number: 5 (lower is better)
Translates to: HPFAVENTNHALRVQRECKWGAP*PSRHAT
Trigger: GGTTGCATGGCGGCTGGGCAAAGGTGCTCCCCACTT...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCGCGTTCTCCCAGGCTTaGAGCGGTGGCAGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: HPFAVENTNHALRVQRECAFSQA*SGGRER
Trigger: CCTCTCTCTGCCACCGCTCAAAGCCTGGGAGAACGC...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429690.5
CDS-3UTR CAA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCACAGAAAAGGCGGATTaGAGCACGATGCTTCCACAT +
Preference number: 5 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLTEKAD*STMLPH
Trigger: ATGTGGAAGCATCGTGCTCAAATCCGCCTTTTCTGT...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCTCCTTCTCCTGTTCATaGCTCTCATCAGCTTACTCG +
Preference number: 5 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLSFSCS*LSSAYS
Trigger: CGAGTAAGCTGATGAGAGCAATGAACAGGAGAAGGA...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCGCTCTTGTCTGGACATaGCTGATATCAAACTTTCCC +
Preference number: 5 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLALVWT*LISNFP
Trigger: GGGAAAGTTTGATATCAGCAATGTCCAGACAAGAGC...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295297.4
CDS-3UTR CAA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCGCGCTTTCCCCCAACTaGTGCCACTCCAAGTGTCAC +
Preference number: 5 (lower is better)
Translates to: HPFAVENTNHALRVQRECALSPN*CHSKCH
Trigger: GTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGC...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCGCGCTTTCCCCCAACTaGTGCCACTCCAAGTGTCAC +
Preference number: 5 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGALSPN*CHSKCH
Trigger: GTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGC...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCTACAAATATGGTCCATaGATTCTCCTTCTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPYKYGP*ILLLGL
Trigger: GAGACCCAGAAGGAGAATCAATGGACCATATTTGTA...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCAGATTTTTCACCCCTTaGCTGTTGAGAATACCAATC +
Preference number: 5 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPRFFTP*LLRIPI
Trigger: GATTGGTATTCTCAACAGCAAAGGGGTGAAAAATCT...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCGGACAAATGTTTGTCTaGGGAAACCATCACACTAAA +
Preference number: 5 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPGQMFV*GNHHTK
Trigger: TTTAGTGTGATGGTTTCCCAAGACAAACATTTGTCC...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp CGTCCCCATCATTACCTCTGTCTCAAGTGCGCTTTCCCCCAACTTGTGCCACTCTACAAATATGGTCCATaGATTCTCCTTCTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: RPHHYLCLKCAFPQLVPLYKYGP*ILLLGL
Trigger: GAGACCCAGAAGGAGAATCAATGGACCATATTTGTA...GAGTGGCACAAGTTGGGGGAAAGCGCACTTGAGACAGAGGTAATGATGGGGACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGCTGATTACCCCGGGGTaGTCCACTGGCACAAATGGC +
Preference number: 5 (lower is better)
Translates to: INDLEIPLCMQGHKETFVLITPG*STGTNG
Trigger: GCCATTTGTGCCAGTGGACAACCCCGGGGTAATCAG...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTCTTCCCAGTCTCTCCTaGGTCCCCTTTCTCACCGGC +
Preference number: 5 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLILPSLS*VPFLTG
Trigger: GCCGGTGAGAAAGGGGACCAAGGAGAGACTGGGAAG...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCAAGTGGGGAGCACCTTaGCCCAGCCGCCATGCAACC +
Preference number: 5 (lower is better)
Translates to: KRIIEELQFSEEQGADTSKWGAP*PSRHAT
Trigger: GGTTGCATGGCGGCTGGGCAAAGGTGCTCCCCACTT...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp GTGCGCTTTCCCCCAACTTGTGCCACTCCAAGTGTCACCCATCATGTAAGGCCCCATCCCACCAGATATTaGAAAACGAAATTCATCTCT +
Preference number: 5 (lower is better)
Translates to: VRFPPTCATPSVTHHVRPHPTRY*KTKFIS
Trigger: AGAGATGAATTTCGTTTTCAAATATCTGGTGGGATG...GGGCCTTACATGATGGGTGACACTTGGAGTGGCACAAGTTGGGGGAAAGCGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCGACCTGGAAATACCCTaGTGCATGCAGGGGCACAAA +
Preference number: 5 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGDLEIP*CMQGHK
Trigger: TTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTC...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS TCA 90 bp CATCTTTGGCTATTGCTCACAAGACCTTCCAACAGCTGGAGTCTTTaGACTCTAGTGTGCGCAGATGTGGAGCTTTTGCTCAAAATCCCC +
Preference number: 5 (lower is better)
Translates to: HLWLLLTRPSNSWSL*TLVCADVELLLKIP
Trigger: GGGGATTTTGAGCAAAAGCTCCACATCTGCGCACACTAGAGTTCAAAGACTCCAGCTGTTGGAAGGTCTTGTGAGCAATAGCCAAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382383.7
ENST00000429690.5
CDS-3UTR CAA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTCTGATTACCCCGGGGTaGTCCACTGGCACAAATGGC +
Preference number: 5 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLILITPG*STGTNG
Trigger: GCCATTTGTGCCAGTGGACAACCCCGGGGTAATCAG...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCGGTCTTTATCCGGTATaGCCCATTGTGTACCAGTCC +
Preference number: 5 (lower is better)
Translates to: HPFAVENTNHALRVQRECGLYPV*PIVYQS
Trigger: GGACTGGTACACAATGGGCAATACCGGATAAAGACC...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGGGATCCCATTCCTGCTaGTTCCACCTTCTGGAACCC +
Preference number: 5 (lower is better)
Translates to: INDLEIPLCMQGHKETFVGSHSC*FHLLEP
Trigger: GGGTTCCAGAAGGTGGAACAAGCAGGAATGGGATCC...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCCAGGAAAAGCAAGCCTaGCCTTTGCACACAACTGCT +
Preference number: 5 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGQEKQA*PLHTTA
Trigger: AGCAGTTGTGTGCAAAGGCAAGGCTTGCTTTTCCTG...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATGACCTGGAAATACCCTaGTGCATGCAGGGGCACAAA +
Preference number: 5 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHDLEIP*CMQGHK
Trigger: TTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTC...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS GCA 90 bp ACATCATGGTTTCCTGTGTTGGCGTCGAAGGTCTTTATCCGGTATTaGCCATTGTGTACCAGTCCGATTGCCAGATGCTTATTAGCCAAT +
Preference number: 5 (lower is better)
Translates to: TSWFPVLASKVFIRY*PLCTSPIARCLLAN
Trigger: ATTGGCTAATAAGCATCTGGCAATCGGACTGGTACACAATGGGCAATACCGGATAAAGACCTTCGACGCCAACACAGGAAACCATGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCACAGAAAAGGCGGATTaGAGCACGATGCTTCCACAT +
Preference number: 5 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGTEKAD*STMLPH
Trigger: ATGTGGAAGCATCGTGCTCAAATCCGCCTTTTCTGT...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCTCATGGTTTCCTGTGTaGGCGTCGAAGGTCTTTATC +
Preference number: 5 (lower is better)
Translates to: HPFAVENTNHALRVQRECSWFPV*ASKVFI
Trigger: GATAAAGACCTTCGACGCCAACACAGGAAACCATGA...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCTCATGGTTTCCTGTGTaGGCGTCGAAGGTCTTTATC +
Preference number: 5 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGSWFPV*ASKVFI
Trigger: GATAAAGACCTTCGACGCCAACACAGGAAACCATGA...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS GCA 90 bp GAGAATGCGTTTGAAGCTTGGAGCTCATGCTGTTGTACGAAGTTTTaGAACTGTCTTTCTCAGTTTAAACAACCTCCCACTCCTTCTCCC +
Preference number: 5 (lower is better)
Translates to: ENAFEAWSSCCCTKF*NCLSQFKQPPTPSP
Trigger: GGGAGAAGGAGTGGGAGGTTGTTTAAACTGAGAAAGACAGTTGCAAAACTTCGTACAACAGCATGAGCTCCAAGCTTCAAACGCATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295297.4
CDS-3UTR CAA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCTTGGAGCTCATGCTGTaGTACGAAGTTTTGCAACTG +
Preference number: 5 (lower is better)
Translates to: HPFAVENTNHALRVQRECLELML*YEVLQL
Trigger: CAGTTGCAAAACTTCGTACAACAGCATGAGCTCCAA...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295297.4
CDS-3UTR CAA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTGGTCTTTATCCGGTATaGCCCATTGTGTACCAGTCC +
Preference number: 5 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIGLYPV*PIVYQS
Trigger: GGACTGGTACACAATGGGCAATACCGGATAAAGACC...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCTTCAAATCCATCTGTTaGCTATGCTGCTCATCACAC +
Preference number: 5 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGFKSIC*LCCSSH
Trigger: GTGTGATGAGCAGCATAGCAAACAGATGGATTTGAA...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCAATACCAATCATGCATaGAGGGTGCAAAGAGAATGC +
Preference number: 5 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGNTNHA*RVQREC
Trigger: GCATTCTCTTTGCACCCTCAATGCATGATTGGTATT...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCTTCACCCCTTTGCTGTaGAGAATACCAATCATGCAT +
Preference number: 5 (lower is better)
Translates to: HPFAVENTNHALRVQRECFTPLL*RIPIMH
Trigger: ATGCATGATTGGTATTCTCAACAGCAAAGGGGTGAA...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTTCCTTCTCCTGTTCATaGCTCTCATCAGCTTACTCG +
Preference number: 5 (lower is better)
Translates to: NHALRVQRECSAEFLIPFSFSCS*LSSAYS
Trigger: CGAGTAAGCTGATGAGAGCAATGAACAGGAGAAGGA...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTAAGCAAGCCTTGCCTTaGCACACAACTGCTAGATCA +
Preference number: 5 (lower is better)
Translates to: NHALRVQRECSAEFLIPFKQALP*HTTARS
Trigger: TGATCTAGCAGTTGTGTGCAAAGGCAAGGCTTGCTT...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGAAGCAAGCCTTGCCTTaGCACACAACTGCTAGATCA +
Preference number: 5 (lower is better)
Translates to: INDLEIPLCMQGHKETFVKQALP*HTTARS
Trigger: TGATCTAGCAGTTGTGTGCAAAGGCAAGGCTTGCTT...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCGACCTGGAAATACCCTaGTGCATGCAGGGGCACAAA +
Preference number: 5 (lower is better)
Translates to: KRIIEELQFSEEQGADTSDLEIP*CMQGHK
Trigger: TTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTC...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTCAACAGCTGGAGTCTTaGAACTCTAGTGTGCGCAGA +
Preference number: 5 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIQQLES*NSSVRR
Trigger: TCTGCGCACACTAGAGTTCAAAGACTCCAGCTGTTG...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429690.5
CDS-3UTR CAA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTAAACATCTTTGGCTCTaGCTCTTAGATGGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: NHALRVQRECSAEFLIPFKHLWL*LLDGGL
Trigger: CAGCCCACCATCTAAGAGCAAGAGCCAAAGATGTTT...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444304.3
CDS-3UTR CAA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGAATCCGGTATTGCCCATaGTGTACCAGTCCGATTGCC +
Preference number: 5 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGIRYCP*CTSPIA
Trigger: GGCAATCGGACTGGTACACAATGGGCAATACCGGAT...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATTTTACCACAGGGATCTaGGTCCTGATCACAATTCAT +
Preference number: 5 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHFTTGI*VLITIH
Trigger: ATGAATTGTGATCAGGACCAAGATCCCTGTGGTAAA...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATTTCAAATCCATCTGTTaGCTATGCTGCTCATCACAC +
Preference number: 5 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHFKSIC*LCCSSH
Trigger: GTGTGATGAGCAGCATAGCAAACAGATGGATTTGAA...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCGGACAAATGTTTGTCTaGGGAAACCATCACACTAAA +
Preference number: 5 (lower is better)
Translates to: HPFAVENTNHALRVQRECGQMFV*GNHHTK
Trigger: TTTAGTGTGATGGTTTCCCAAGACAAACATTTGTCC...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCACAACTGCTAGATCATaGCAACTTTCATCTGTGGTA +
Preference number: 5 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGTTARS*QLSSVV
Trigger: TACCACAGATGAAAGTTGCAATGATCTAGCAGTTGT...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp CACCCCTTTGCTGTTGAGAATACCAATCATGCATTGAGGGTGCAAAGAGAATGCACAACTGCTAGATCATaGCAACTTTCATCTGTGGTA +
Preference number: 5 (lower is better)
Translates to: HPFAVENTNHALRVQRECTTARS*QLSSVV
Trigger: TACCACAGATGAAAGTTGCAATGATCTAGCAGTTGT...GCATTCTCTTTGCACCCTCAATGCATGATTGGTATTCTCAACAGCAAAGGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp TCCTGTACACATGTCCTGACTCAGAAGGAGAGCAATAAGTGCACAAAGTATGGCTTTAATCACAGTGATTaGTGGTTCATGACTGTCTGC +
Preference number: 5 (lower is better)
Translates to: SCTHVLTQKESNKCTKYGFNHSD*WFMTVC
Trigger: GCAGACAGTCATGAACCACAAATCACTGTGATTAAA...GCCATACTTTGTGCACTTATTGCTCTCCTTCTGAGTCAGGACATGTGTACAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGAAAATCCCCTTCCCTTaGGCAGCGAGGATTATTCAT +
Preference number: 5 (lower is better)
Translates to: INDLEIPLCMQGHKETFVKIPFP*AARIIH
Trigger: ATGAATAATCCTCGCTGCCAAAGGGAAGGGGATTTT...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429690.5
CDS-3UTR CAA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATAAACATCTTTGGCTATaGCTCACAAGACCTTCCAAC +
Preference number: 5 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHKHLWL*LTRPSN
Trigger: GTTGGAAGGTCTTGTGAGCAATAGCCAAAGATGTTT...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429690.5
CDS-3UTR CAA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGGCAAGACAAACATCTTaGGCTCTTGCTCTTAGATGG +
Preference number: 5 (lower is better)
Translates to: INDLEIPLCMQGHKETFVARQTS*ALALRW
Trigger: CCATCTAAGAGCAAGAGCCAAAGATGTTTGTCTTGC...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444304.3
CDS GCA 90 bp AAGTGCTCGTCTGAGCATGAGAATGCGTTTGAAGCTTGGAGCTCATaGTGTTGTACGAAGTTTTGCAACTGTCTTTCTCAGTTTAAACAA +
Preference number: 5 (lower is better)
Translates to: KCSSEHENAFEAWSS*CCTKFCNCLSQFKQ
Trigger: TTGTTTAAACTGAGAAAGACAGTTGCAAAACTTCGTACAACAGCATGAGCTCCAAGCTTCAAACGCATTCTCATGCTCAGACGAGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295297.4
CDS CCA 90 bp ACCACAGGGATCTTGGTCCTGATCACAATTCATCATCTTCTGATATaGAATCTAGGTAATCTGTGTCAACGTATAAGAGAAACCCGGAGA +
Preference number: 5 (lower is better)
Translates to: TTGILVLITIHHLLI*NLGNLCQRIRETRR
Trigger: TCTCCGGGTTTCTCTTATACGTTGACACAGATTACCTAGATTCCATATCAGAAGATGATGAATTGTGATCAGGACCAAGATCCCTGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTAAACATGAGGCTTTCTaGCTTTGGTTGTCCCATGAA +
Preference number: 5 (lower is better)
Translates to: NHALRVQRECSAEFLIPFKHEAF*LWLSHE
Trigger: TTCATGGGACAACCAAAGCAAGAAAGCCTCATGTTT...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295297.4
CDS-3UTR CAA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTGCAAGACAAACATCTTaGGCTCTTGTCTGGACATTG +
Preference number: 5 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIARQTS*ALVWTL
Trigger: CAATGTCCAGACAAGAGCCAAAGATGTTTGTCTTGC...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295297.4
CDS-3UTR CAA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGAGGTCTTTATCCGGTATaGCCCATTGTGTACCAGTCC +
Preference number: 5 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGGLYPV*PIVYQS
Trigger: GGACTGGTACACAATGGGCAATACCGGATAAAGACC...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCTCATGGTTTCCTGTGTaGGCGTCGAAGGTCTTTATC +
Preference number: 5 (lower is better)
Translates to: KRIIEELQFSEEQGADTSSWFPV*ASKVFI
Trigger: GATAAAGACCTTCGACGCCAACACAGGAAACCATGA...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGTTTACCACAGGGATCTaGGTCCTGATCACAATTCAT +
Preference number: 5 (lower is better)
Translates to: INDLEIPLCMQGHKETFVFTTGI*VLITIH
Trigger: ATGAATTGTGATCAGGACCAAGATCCCTGTGGTAAA...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTCTGTTGTACGAAGTTTaGCAACTGTCTTTCTCAGTT +
Preference number: 5 (lower is better)
Translates to: NHALRVQRECSAEFLIPFLLYEV*QLSFSV
Trigger: AACTGAGAAAGACAGTTGCAAAACTTCGTACAACAG...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295297.4
CDS-3UTR CAA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGAAGCATGAGAATGCGTTaGAAGCTTGGAGCTCATGCT +
Preference number: 5 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGSMRMR*KLGAHA
Trigger: AGCATGAGCTCCAAGCTTCAAACGCATTCTCATGCT...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295297.4
CDS-3UTR CAA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTTTCAAATCCATCTGTTaGCTATGCTGCTCATCACAC +
Preference number: 5 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIFKSIC*LCCSSH
Trigger: GTGTGATGAGCAGCATAGCAAACAGATGGATTTGAA...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTTTCACCCCTTTGCTGTaGAGAATACCAATCATGCAT +
Preference number: 5 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIFTPLL*RIPIMH
Trigger: ATGCATGATTGGTATTCTCAACAGCAAAGGGGTGAA...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGATCCTTCTCCTGTTCATaGCTCTCATCAGCTTACTCG +
Preference number: 5 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGSFSCS*LSSAYS
Trigger: CGAGTAAGCTGATGAGAGCAATGAACAGGAGAAGGA...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp AGCAGACCCTGTGTGCTTTTAGCTTCAAATCCATCTGTTTGCTATGCTGCTCATCTTTGGGGCTTCAGATaGATAAGTAATTTCCTGATT +
Preference number: 5 (lower is better)
Translates to: SRPCVLLASNPSVCYAAHLWGFR*ISNFLI
Trigger: AATCAGGAAATTACTTATCAATCTGAAGCCCCAAAG...ATGAGCAGCATAGCAAACAGATGGATTTGAAGCTAAAAGCACACAGGGTCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429690.5
CDS TCA 90 bp TGGTCATACAATGTGGTAATCTCTCTGAAAGCATTTTGTCCAGGATaGAAGCAATTGTATCCTAAGATGAAATTTTGTCGTCACAGCCCC +
Preference number: 5 (lower is better)
Translates to: WSYNVVISLKAFCPG*KQLYPKMKFCRHSP
Trigger: GGGGCTGTGACGACAAAATTTCATCTTAGGATACAATTGCTTTCATCCTGGACAAAATGCTTTCAGAGAGATTACCACATTGTATGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510958.1
CDS GCA 90 bp GTCGAAGGTCTTTATCCGGTATTGCCCATTGTGTACCAGTCCGATTaGCAGATGCTTATTAGCCAATGTGATATCATAAGAAAAGTAATA +
Preference number: 5 (lower is better)
Translates to: VEGLYPVLPIVYQSD*QMLISQCDIIRKVI
Trigger: TATTACTTTTCTTATGATATCACATTGGCTAATAAGCATCTGGCAATCGGACTGGTACACAATGGGCAATACCGGATAAAGACCTTCGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS GCA 90 bp CACTGGACATGGCCCTTAATGTTTCTGAGTCTTGATTTTCACAGCTaGAGAATGAAAATCGTAATAGTAACCCTTGCTTGGTCATACAAT +
Preference number: 5 (lower is better)
Translates to: HWTWPLMFLSLDFHS*RMKIVIVTLAWSYN
Trigger: ATTGTATGACCAAGCAAGGGTTACTATTACGATTTTCATTCTGCAGCTGTGAAAATCAAGACTCAGAAACATTAAGGGCCATGTCCAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510958.1
CDS-3UTR CAA 90 bp AATCATGCATTGAGGGTGCAAAGAGAATGCAGTGCTGAATTCCTCATTCCCTTTATAGCCTTTCGAGAATaGTCAAAGATTTTGGGATGT +
Preference number: 5 (lower is better)
Translates to: NHALRVQRECSAEFLIPFIAFRE*SKILGC
Trigger: ACATCCCAAAATCTTTGACAATTCTCGAAAGGCTAT...AAAGGGAATGAGGAATTCAGCACTGCATTCTCTTTGCACCCTCAATGCATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTAGATTTTTCACCCCTTaGCTGTTGAGAATACCAATC +
Preference number: 5 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIRFFTP*LLRIPI
Trigger: GATTGGTATTCTCAACAGCAAAGGGGTGAAAAATCT...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGCTGTCACATCCTAATTaGGAAGTAAACATTTCCTCT +
Preference number: 5 (lower is better)
Translates to: INDLEIPLCMQGHKETFVLSHPN*EVNISS
Trigger: AGAGGAAATGTTTACTTCCAAATTAGGATGTGACAG...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTTTTAATCACAGTGATTaGTGGTTCATGACTGTCTGC +
Preference number: 5 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIFNHSD*WFMTVC
Trigger: GCAGACAGTCATGAACCACAAATCACTGTGATTAAA...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp ATAAATGACCTGGAAATACCCTTGTGCATGCAGGGGCACAAAGAAACATTTGTGCATCCCACCAGATATTaGAAAACGAAATTCATCTCT +
Preference number: 5 (lower is better)
Translates to: INDLEIPLCMQGHKETFVHPTRY*KTKFIS
Trigger: AGAGATGAATTTCGTTTTCAAATATCTGGTGGGATG...CACAAATGTTTCTTTGTGCCCCTGCATGCACAAGGGTATTTCCAGGTCATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGAAATACCAATCATGCATaGAGGGTGCAAAGAGAATGC +
Preference number: 5 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGNTNHA*RVQREC
Trigger: GCATTCTCTTTGCACCCTCAATGCATGATTGGTATT...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCTTTAATCACAGTGATTaGTGGTTCATGACTGTCTGC +
Preference number: 5 (lower is better)
Translates to: KRIIEELQFSEEQGADTSFNHSD*WFMTVC
Trigger: GCAGACAGTCATGAACCACAAATCACTGTGATTAAA...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp TCCTCCAATTCTCAGGCTGGCTTTCAAAGCTCTTACAAATATGGTCCATTGATTCATCCCACCAGATATTaGAAAACGAAATTCATCTCT +
Preference number: 5 (lower is better)
Translates to: SSNSQAGFQSSYKYGPLIHPTRY*KTKFIS
Trigger: AGAGATGAATTTCGTTTTCAAATATCTGGTGGGATG...AATCAATGGACCATATTTGTAAGAGCTTTGAAAGCCAGCCTGAGAATTGGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCATAGCCTTTCGAGAATaGTCAAAGATTTTGGGATGT +
Preference number: 5 (lower is better)
Translates to: KRIIEELQFSEEQGADTSIAFRE*SKILGC
Trigger: ACATCCCAAAATCTTTGACAATTCTCGAAAGGCTAT...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp AAAGTGGTGCCCATATTTATGAGAAAGCTATTAGGACAAATGTTTGTCTTGGGAGGACAAATGTTTGTCTaGGGAAACCATCACACTAAA +
Preference number: 5 (lower is better)
Translates to: KVVPIFMRKLLGQMFVLGGQMFV*GNHHTK
Trigger: TTTAGTGTGATGGTTTCCCAAGACAAACATTTGTCC...TCCCAAGACAAACATTTGTCCTAATAGCTTTCTCATAAATATGGGCACCACTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS-3UTR CAA 90 bp AAGAGAATAATTGAAGAATTGCAGTTCAGTGAAGAACAAGGTGCTGACACAAGCCTGTCACATCCTAATTaGGAAGTAAACATTTCCTCT +
Preference number: 5 (lower is better)
Translates to: KRIIEELQFSEEQGADTSLSHPN*EVNISS
Trigger: AGAGGAAATGTTTACTTCCAAATTAGGATGTGACAG...GCTTGTGTCAGCACCTTGTTCTTCACTGAACTGCAATTCTTCAATTATTCTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS CCA 72 bp TCTCTACCATCTCTTCCTGGAAGGCCGATGCGACCATaGGGCCCAGGGGAACCATTTGCTCCAGGGGGCCCT +
Preference number: 6 (lower is better)
Translates to: SLPSLPGRPMRP*GPGEPFAPGGP
Trigger: AGGGCCCCCTGGAGCAAATGGTTCCCCTGGGCCCCATGGTCGCATCGGCCTTCCAGGAAGAGATGGTAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295297.4
ENST00000382383.7
ENST00000397700.6
ENST00000429690.5
ENST00000444304.3
CDS CCA 72 bp TTCGCTTTCAAAAGCGTTCTCCCAGGCTTTGAGCGGTaGCAGAGAGAGGGAGCGGGCAAGGACCCCGGCGTG +
Preference number: 6 (lower is better)
Translates to: FAFKSVLPGFER*QREGAGKDPGV
Trigger: CACGCCGGGGTCCTTGCCCGCTCCCTCTCTCTGCCACCGCTCAAAGCCTGGGAGAACGCTTTTGAAAGCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382383.7
ENST00000429690.5
CDS GCA 72 bp GAAGGACAGGAACCTAAGAGCCGACTGTCAAGCCAGTaGTGTGTCCACTGTAGGGAGGTGGAGGCAGATGCA +
Preference number: 6 (lower is better)
Translates to: EGQEPKSRLSSQ*CVHCREVEADA
Trigger: TGCATCTGCCTCCACCTCCCTACAGTGGACACAGCACTGGCTTGACAGTCGGCTCTTAGGTTCCTGTCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510958.1
CDS CAA 72 bp TTTCCTGATTCGCTTTCAAAAGCGTTCTCCCAGGCTTaGAGCGGTGGCAGAGAGAGGGAGCGGGCAAGGACC +
Preference number: 6 (lower is better)
Translates to: FPDSLSKAFSQA*SGGRERERART
Trigger: GGTCCTTGCCCGCTCCCTCTCTCTGCCACCGCTCAAAGCCTGGGAGAACGCTTTTGAAAGCGAATCAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382383.7
ENST00000429690.5
CDS CCA 72 bp CTGTGGACCCCGAAGCCACATCATGGTTTCCTGTGTTaGCGTCGAAGGTCTTTATCCGGTATTGCCCATTGT +
Preference number: 6 (lower is better)
Translates to: LWTPKPHHGFLC*RRRSLSGIAHC
Trigger: ACAATGGGCAATACCGGATAAAGACCTTCGACGCCAACACAGGAAACCATGATGTGGCTTCGGGGTCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS CAA 72 bp ACTGTGGACCCCGAAGCCACATCATGGTTTCCTGTGTaGGCGTCGAAGGTCTTTATCCGGTATTGCCCATTG +
Preference number: 6 (lower is better)
Translates to: TVDPEATSWFPV*ASKVFIRYCPL
Trigger: CAATGGGCAATACCGGATAAAGACCTTCGACGCCAACACAGGAAACCATGATGTGGCTTCGGGGTCCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS CAA 72 bp GTGTTGGCGTCGAAGGTCTTTATCCGGTATTGCCCATaGTGTACCAGTCCGATTGCCAGATGCTTATTAGCC +
Preference number: 6 (lower is better)
Translates to: VLASKVFIRYCP*CTSPIARCLLA
Trigger: GGCTAATAAGCATCTGGCAATCGGACTGGTACACAATGGGCAATACCGGATAAAGACCTTCGACGCCAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS CAA 72 bp GTTTCCTGTGTTGGCGTCGAAGGTCTTTATCCGGTATaGCCCATTGTGTACCAGTCCGATTGCCAGATGCTT +
Preference number: 6 (lower is better)
Translates to: VSCVGVEGLYPV*PIVYQSDCQML
Trigger: AAGCATCTGGCAATCGGACTGGTACACAATGGGCAATACCGGATAAAGACCTTCGACGCCAACACAGGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS TCA 72 bp CTATTGCTCACAAGACCTTCCAACAGCTGGAGTCTTTaGACTCTAGTGTGCGCAGATGTGGAGCTTTTGCTC +
Preference number: 6 (lower is better)
Translates to: LLLTRPSNSWSL*TLVCADVELLL
Trigger: GAGCAAAAGCTCCACATCTGCGCACACTAGAGTTCAAAGACTCCAGCTGTTGGAAGGTCTTGTGAGCAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382383.7
ENST00000429690.5
CDS GCA 72 bp TTTCCTGTGTTGGCGTCGAAGGTCTTTATCCGGTATTaGCCATTGTGTACCAGTCCGATTGCCAGATGCTTA +
Preference number: 6 (lower is better)
Translates to: FPVLASKVFIRY*PLCTSPIARCL
Trigger: TAAGCATCTGGCAATCGGACTGGTACACAATGGGCAATACCGGATAAAGACCTTCGACGCCAACACAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS CAA 72 bp GCTATTGCTCACAAGACCTTCCAACAGCTGGAGTCTTaGAACTCTAGTGTGCGCAGATGTGGAGCTTTTGCT +
Preference number: 6 (lower is better)
Translates to: AIAHKTFQQLES*NSSVRRCGAFA
Trigger: AGCAAAAGCTCCACATCTGCGCACACTAGAGTTCAAAGACTCCAGCTGTTGGAAGGTCTTGTGAGCAATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382383.7
ENST00000429690.5
CDS CAA 90 bp CACATCATGGTTTCCTGTGTTGGCGTCGAAGGTCTTTATCCGGTATaGCCCATTGTGTACCAGTCCGATTGCCAGATGCTTATTAGCCAA +
Preference number: 6 (lower is better)
Translates to: HIMVSCVGVEGLYPV*PIVYQSDCQMLISQ
Trigger: TTGGCTAATAAGCATCTGGCAATCGGACTGGTACACAATGGGCAATACCGGATAAAGACCTTCGACGCCAACACAGGAAACCATGATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS CAA 90 bp TGGTTTCCTGTGTTGGCGTCGAAGGTCTTTATCCGGTATTGCCCATaGTGTACCAGTCCGATTGCCAGATGCTTATTAGCCAATGTGATA +
Preference number: 6 (lower is better)
Translates to: WFPVLASKVFIRYCP*CTSPIARCLLANVI
Trigger: TATCACATTGGCTAATAAGCATCTGGCAATCGGACTGGTACACAATGGGCAATACCGGATAAAGACCTTCGACGCCAACACAGGAAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS CAA 90 bp ACATCTTTGGCTATTGCTCACAAGACCTTCCAACAGCTGGAGTCTTaGAACTCTAGTGTGCGCAGATGTGGAGCTTTTGCTCAAAATCCC +
Preference number: 6 (lower is better)
Translates to: TSLAIAHKTFQQLES*NSSVRRCGAFAQNP
Trigger: GGGATTTTGAGCAAAAGCTCCACATCTGCGCACACTAGAGTTCAAAGACTCCAGCTGTTGGAAGGTCTTGTGAGCAATAGCCAAAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382383.7
ENST00000429690.5
CDS CCA 72 bp AAGTGCTCGTCTGAGCATGAGAATGCGTTTGAAGCTTaGAGCTCATGCTGTTGTACGAAGTTTTGCAACTGT +
Preference number: 6 (lower is better)
Translates to: KCSSEHENAFEA*SSCCCTKFCNC
Trigger: ACAGTTGCAAAACTTCGTACAACAGCATGAGCTCCAAGCTTCAAACGCATTCTCATGCTCAGACGAGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295297.4
CDS CAA 72 bp CAACTGTCAATCCTGTCTGAGTTGGGTTCCATGAAGTaGCGTTCCATTATGCACTTGCTTGTCTGGACATTG +
Preference number: 6 (lower is better)
Translates to: QLSILSELGSMK*RSIMHLLVWTL
Trigger: CAATGTCCAGACAAGCAAGTGCATAATGGAACGCAACTTCATGGAACCCAACTCAGACAGGATTGACAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512144.1
CDS TCA 72 bp TTCTTCAACTGTCAATCCTGTCTGAGTTGGGTTCCATaGAGTTGCGTTCCATTATGCACTTGCTTGTCTGGA +
Preference number: 6 (lower is better)
Translates to: FFNCQSCLSWVP*SCVPLCTCLSG
Trigger: TCCAGACAAGCAAGTGCATAATGGAACGCAACTTCATGGAACCCAACTCAGACAGGATTGACAGTTGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512144.1
CDS GCA 72 bp TCTGAGCATGAGAATGCGTTTGAAGCTTGGAGCTCATaGTGTTGTACGAAGTTTTGCAACTGTCTTTCTCAG +
Preference number: 6 (lower is better)
Translates to: SEHENAFEAWSS*CCTKFCNCLSQ
Trigger: CTGAGAAAGACAGTTGCAAAACTTCGTACAACAGCATGAGCTCCAAGCTTCAAACGCATTCTCATGCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295297.4
CDS CAA 90 bp CCTTCTGGAACCCCAGATTCAATCAGAGTGTTTACCACAGGGATCTaGGTCCTGATCACAATTCATCATCTTCTGATATGGAATCTAGGT +
Preference number: 6 (lower is better)
Translates to: PSGTPDSIRVFTTGI*VLITIHHLLIWNLG
Trigger: ACCTAGATTCCATATCAGAAGATGATGAATTGTGATCAGGACCAAGATCCCTGTGGTAAACACTCTGATTGAATCTGGGGTTCCAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS CAA 90 bp TTGGTTCTTCAACTGTCAATCCTGTCTGAGTTGGGTTCCATGAAGTaGCGTTCCATTATGCACTTGCTTGTCTGGACATTGCTGATATCA +
Preference number: 6 (lower is better)
Translates to: LVLQLSILSELGSMK*RSIMHLLVWTLLIS
Trigger: TGATATCAGCAATGTCCAGACAAGCAAGTGCATAATGGAACGCAACTTCATGGAACCCAACTCAGACAGGATTGACAGTTGAAGAACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512144.1
CDS CAA 90 bp CTCACAATTAAAGAGTTGGTTCTTCAACTGTCAATCCTGTCTGAGTaGGGTTCCATGAAGTTGCGTTCCATTATGCACTTGCTTGTCTGG +
Preference number: 6 (lower is better)
Translates to: LTIKELVLQLSILSE*GSMKLRSIMHLLVW
Trigger: CCAGACAAGCAAGTGCATAATGGAACGCAACTTCATGGAACCCAACTCAGACAGGATTGACAGTTGAAGAACCAACTCTTTAATTGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512144.1
CDS CAA 72 bp ACCCCAGATTCAATCAGAGTGTTTACCACAGGGATCTaGGTCCTGATCACAATTCATCATCTTCTGATATGG +
Preference number: 6 (lower is better)
Translates to: TPDSIRVFTTGI*VLITIHHLLIW
Trigger: CCATATCAGAAGATGATGAATTGTGATCAGGACCAAGATCCCTGTGGTAAACACTCTGATTGAATCTGGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS CAA 72 bp AAAGAGTTGGTTCTTCAACTGTCAATCCTGTCTGAGTaGGGTTCCATGAAGTTGCGTTCCATTATGCACTTG +
Preference number: 6 (lower is better)
Translates to: KELVLQLSILSE*GSMKLRSIMHL
Trigger: CAAGTGCATAATGGAACGCAACTTCATGGAACCCAACTCAGACAGGATTGACAGTTGAAGAACCAACTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512144.1
CDS GCA 72 bp TTTGAAGCTTGGAGCTCATGCTGTTGTACGAAGTTTTaGAACTGTCTTTCTCAGTTTAAACAACCTCCCACT +
Preference number: 6 (lower is better)
Translates to: FEAWSSCCCTKF*NCLSQFKQPPT
Trigger: AGTGGGAGGTTGTTTAAACTGAGAAAGACAGTTGCAAAACTTCGTACAACAGCATGAGCTCCAAGCTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295297.4
CDS GCA 72 bp CTTTATCCGGTATTGCCCATTGTGTACCAGTCCGATTaGCAGATGCTTATTAGCCAATGTGATATCATAAGA +
Preference number: 6 (lower is better)
Translates to: LYPVLPIVYQSD*QMLISQCDIIR
Trigger: TCTTATGATATCACATTGGCTAATAAGCATCTGGCAATCGGACTGGTACACAATGGGCAATACCGGATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295297.4
ENST00000429690.5
ENST00000444304.3
CDS CAA 72 bp CAGCTGCAGAATGAAAATCGTAATAGTAACCCTTGCTaGGTCATACAATGTGGTAATCTCTCTGAAAGCATT +
Preference number: 6 (lower is better)
Translates to: QLQNENRNSNPC*VIQCGNLSESI
Trigger: AATGCTTTCAGAGAGATTACCACATTGTATGACCAAGCAAGGGTTACTATTACGATTTTCATTCTGCAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510958.1
CDS CCA 72 bp AGCTGCAGAATGAAAATCGTAATAGTAACCCTTGCTTaGTCATACAATGTGGTAATCTCTCTGAAAGCATTT +
Preference number: 6 (lower is better)
Translates to: SCRMKIVIVTLA*SYNVVISLKAF
Trigger: AAATGCTTTCAGAGAGATTACCACATTGTATGACCAAGCAAGGGTTACTATTACGATTTTCATTCTGCAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510958.1
CDS TCA 72 bp AATGTGGTAATCTCTCTGAAAGCATTTTGTCCAGGATaGAAGCAATTGTATCCTAAGATGAAATTTTGTCGT +
Preference number: 6 (lower is better)
Translates to: NVVISLKAFCPG*KQLYPKMKFCR
Trigger: ACGACAAAATTTCATCTTAGGATACAATTGCTTTCATCCTGGACAAAATGCTTTCAGAGAGATTACCACATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510958.1