RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C1QTNF3 (Homo sapiens)

Ensembl gene IDs: ENSG00000082196

Ensembl transcript IDs: ENST00000231338.7, ENST00000382065.8, ENST00000508398.1, ENST00000508434.1, ENST00000513065.1, ENST00000513471.5

Found 217 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGTCTCTGGCCATCAGATATTATCTTTTCCACAAGCTTTTCTTATaGTCTCAGCTAGATACTGTTTCTCTCTCCTGTGAATTCCTAGCC +
Preference number: 1 (lower is better)
Translates to: LSLAIRYYLFHKLFL*SQLDTVSLSCEFLA
Trigger: GGCTAGGAATTCACAGGAGAGAGAAACAGTATCTAGCTGAGAGCATAAGAAAAGCTTGTGGAAAAGATAATATCTGATGGCCAGAGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
3UTR TCA 90 bp TGTGAAATCAGTCTTCCAAGTATATTTCTGGTCATGGGTAAATTGTaGAGGCATTGGAAATTATCTGCACCTTTTCCCATCTCTGTTGTG +
Preference number: 1 (lower is better)
Translates to: CEISLPSIFLVMGKL*RHWKLSAPFPISVV
Trigger: CACAACAGAGATGGGAAAAGGTGCAGATAATTTCCAATGCCTTCACAATTTACCCATGACCAGAAATATACTTGGAAGACTGATTTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
3UTR TCA 90 bp AAGGCTGATCATTATGTGAAACAGTTCTACACCATATTACATCCCTaGAGCAAGCAGAAACTCAAGTGCTTCGTTTGCAGAGTTGTTTTA +
Preference number: 1 (lower is better)
Translates to: KADHYVKQFYTILHP*SKQKLKCFVCRVVL
Trigger: TAAAACAACTCTGCAAACGAAGCACTTGAGTTTCTGCTTGCTTCAGGGATGTAATATGGTGTAGAACTGTTTCACATAATGATCAGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
3UTR CCA 90 bp CTCAGTTTTGGGACACTTGTGAAATCAGTCTTCCAAGTATATTTCTaGTCATGGGTAAATTGTGAAGGCATTGGAAATTATCTGCACCTT +
Preference number: 1 (lower is better)
Translates to: LSFGTLVKSVFQVYF*SWVNCEGIGNYLHL
Trigger: AAGGTGCAGATAATTTCCAATGCCTTCACAATTTACCCATGACCAGAAATATACTTGGAAGACTGATTTCACAAGTGTCCCAAAACTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
3UTR TCA 90 bp GTGTGCCCAAGTCACCTATTCACATGGCTGTTCACATCATCTGCATaGAAATATTTTCACTTTCTGTTAACCATAGTGATTTACAATTCT +
Preference number: 1 (lower is better)
Translates to: VCPSHLFTWLFTSSA*KYFHFLLTIVIYNS
Trigger: AGAATTGTAAATCACTATGGTTAACAGAAAGTGAAAATATTTTCATGCAGATGATGTGAACAGCCATGTGAATAGGTGACTTGGGCACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
3UTR TCA 90 bp TATAATGTTTTCTACACTGGAAAATTACCAAGGCTGATCATTATGTaGAACAGTTCTACACCATATTACATCCCTGAAGCAAGCAGAAAC +
Preference number: 1 (lower is better)
Translates to: YNVFYTGKLPRLIIM*NSSTPYYIPEASRN
Trigger: GTTTCTGCTTGCTTCAGGGATGTAATATGGTGTAGAACTGTTTCACATAATGATCAGCCTTGGTAATTTTCCAGTGTAGAAAACATTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
3UTR-3UTR CCA 90 bp CTAGTGCCCCTGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCGAGAAGACTATTTTGTaGTTGATTCTTCTGAGCCCC +
Preference number: 2 (lower is better)
Translates to: LVPLFLPQPCHITTSDSLEKTIL*LILLSP
Trigger: GGGGCTCAGAAGAATCAACCACAAAATAGTCTTCTC...GAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACAGGGGCACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
3UTR-3UTR CCA 90 bp CTAGTGCCCCTGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCATTGTCCAACATTATTaGTGTACCTGTAGCGTGAAC +
Preference number: 2 (lower is better)
Translates to: LVPLFLPQPCHITTSDSLIVQHY*CTCSVN
Trigger: GTTCACGCTACAGGTACACCAATAATGTTGGACAAT...GAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACAGGGGCACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
3UTR-3UTR TCA 90 bp CTAGTGCCCCTGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCTTAGTCAAGGTCATCTaGGAAGACTATTTTGTGGTT +
Preference number: 2 (lower is better)
Translates to: LVPLFLPQPCHITTSDSLLVKVI*EDYFVV
Trigger: AACCACAAAATAGTCTTCTCAGATGACCTTGACTAA...GAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACAGGGGCACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
3UTR-3UTR TCA 90 bp AAATTGTCTCTGGCCATCAGATATTATCTTTTCCACAAGCTTTTCTTATGCTCTAGGCGGAGGCTGCGGTaGGCTGAGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: KLSLAIRYYLFHKLFLCSRRRLR*AEIMPL
Trigger: CAGTGGCATGATCTCAGCTCACCGCAGCCTCCGCCT...AGAGCATAAGAAAAGCTTGTGGAAAAGATAATATCTGATGGCCAGAGACAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
3UTR-3UTR CCA 90 bp CTAGTGCCCCTGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAGTCTTCCCCAAAGTaGAGCTATTCTAGTCATATA +
Preference number: 2 (lower is better)
Translates to: LVPLFLPQPCHITTSDSLKSSPK*SYSSHI
Trigger: TATATGACTAGAATAGCTCCACTTTGGGGAAGACTT...GAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACAGGGGCACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
3UTR-3UTR CCA 90 bp TCATATGACCCTGCTGTGTGCCCAAGTCACCTATTCACATGGCTGTTCACATCAAAGTCTTCCCCAAAGTaGAGCTATTCTAGTCATATA +
Preference number: 2 (lower is better)
Translates to: SYDPAVCPSHLFTWLFTSKSSPK*SYSSHI
Trigger: TATATGACTAGAATAGCTCCACTTTGGGGAAGACTT...TGATGTGAACAGCCATGTGAATAGGTGACTTGGGCACACAGCAGGGTCATATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
3UTR-3UTR TCA 90 bp TCTTTTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTGGTGTACCTGTAGCGTaGACAACATTGCAACCAATA +
Preference number: 2 (lower is better)
Translates to: SFRCQGKSDKDAEYISQGGVPVA*TTLQPI
Trigger: TATTGGTTGCAATGTTGTTCACGCTACAGGTACACC...ACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
3UTR-3UTR TCA 90 bp AAATTGTCTCTGGCCATCAGATATTATCTTTTCCACAAGCTTTTCTTATGCTCTTGTTTCTCTCTCCTGTaGATTCCTAGCCCTTTGCCT +
Preference number: 2 (lower is better)
Translates to: KLSLAIRYYLFHKLFLCSCFSLL*IPSPLP
Trigger: AGGCAAAGGGCTAGGAATTCACAGGAGAGAGAAACA...AGAGCATAAGAAAAGCTTGTGGAAAAGATAATATCTGATGGCCAGAGACAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
3UTR-3UTR TCA 90 bp AAATTGTCTCTGGCCATCAGATATTATCTTTTCCACAAGCTTTTCTTATGCTCTTTCCCATCTCTGTTGTaGATCAATTTCCCACACACC +
Preference number: 2 (lower is better)
Translates to: KLSLAIRYYLFHKLFLCSFPSLL*INFPHT
Trigger: GGTGTGTGGGAAATTGATTCACAACAGAGATGGGAA...AGAGCATAAGAAAAGCTTGTGGAAAAGATAATATCTGATGGCCAGAGACAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
3UTR-3UTR CCA 90 bp TTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTCATCATTGTCCAACATTATTaGTGTACCTGTAGCGTGAAC +
Preference number: 2 (lower is better)
Translates to: LGAKERVIKMLSILVKVIIVQHY*CTCSVN
Trigger: GTTCACGCTACAGGTACACCAATAATGTTGGACAAT...GATGACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
3UTR-3UTR GCA 90 bp CAAACATACCAAAGCAAGAAATTGTCTCTGGCCATCAGATATTATCTTTTCCACGCATTGGAAATTATCTaGACCTTTTCCCATCTCTGT +
Preference number: 2 (lower is better)
Translates to: QTYQSKKLSLAIRYYLFHALEII*TFSHLC
Trigger: ACAGAGATGGGAAAAGGTGCAGATAATTTCCAATGC...GTGGAAAAGATAATATCTGATGGCCAGAGACAATTTCTTGCTTTGGTATGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
3UTR-3UTR GCA 90 bp AAATTGTCTCTGGCCATCAGATATTATCTTTTCCACAAGCTTTTCTTATGCTCTAAGCAGAAACTCAAGTaGTTCGTTTGCAGAGTTGTT +
Preference number: 2 (lower is better)
Translates to: KLSLAIRYYLFHKLFLCSKQKLK*FVCRVV
Trigger: AACAACTCTGCAAACGAAGCACTTGAGTTTCTGCTT...AGAGCATAAGAAAAGCTTGTGGAAAAGATAATATCTGATGGCCAGAGACAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
3UTR-3UTR CCA 90 bp CAAACATACCAAAGCAAGAAATTGTCTCTGGCCATCAGATATTATCTTTTCCACGTATATTTCTGGTCATaGGTAAATTGTGAAGGCATT +
Preference number: 2 (lower is better)
Translates to: QTYQSKKLSLAIRYYLFHVYFWS*VNCEGI
Trigger: AATGCCTTCACAATTTACCCATGACCAGAAATATAC...GTGGAAAAGATAATATCTGATGGCCAGAGACAATTTCTTGCTTTGGTATGTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
3UTR-3UTR CAA 90 bp TCATATGACCCTGCTGTGTGCCCAAGTCACCTATTCACATGGCTGTTCACATCACTAGTGCCCCTGTTCTaGCCCCAGCCCTGTCATATC +
Preference number: 3 (lower is better)
Translates to: SYDPAVCPSHLFTWLFTSLVPLF*PQPCHI
Trigger: GATATGACAGGGCTGGGGCAAGAACAGGGGCACTAG...TGATGTGAACAGCCATGTGAATAGGTGACTTGGGCACACAGCAGGGTCATATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
3UTR GCA 72 bp AAGCGAAGTTTTCTGAAGTCATATGACCCTGCTGTGTaGCCAAGTCACCTATTCACATGGCTGTTCACATCA +
Preference number: 3 (lower is better)
Translates to: KRSFLKSYDPAV*PSHLFTWLFTS
Trigger: TGATGTGAACAGCCATGTGAATAGGTGACTTGGGCACACAGCAGGGTCATATGACTTCAGAAAACTTCGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
3UTR TCA 72 bp CTTATGCTCTCAGCTAGATACTGTTTCTCTCTCCTGTaGATTCCTAGCCCTTTGCCTTCTATGGCTGTAAAA +
Preference number: 3 (lower is better)
Translates to: LMLSARYCFSLL*IPSPLPSMAVK
Trigger: TTTTACAGCCATAGAAGGCAAAGGGCTAGGAATTCACAGGAGAGAGAAACAGTATCTAGCTGAGAGCATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382065.8
3UTR GCA 72 bp TTTCCAACCTGCGTCAGAGGAGAATTATCTTTTAGGTaGCAAGGAAAGAGTGATAAAGATGCTGAGTATATT +
Preference number: 3 (lower is better)
Translates to: FPTCVRGELSFR*QGKSDKDAEYI
Trigger: AATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAAAAGATAATTCTCCTCTGACGCAGGTTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
3UTR CCA 72 bp GGGACACTTGTGAAATCAGTCTTCCAAGTATATTTCTaGTCATGGGTAAATTGTGAAGGCATTGGAAATTAT +
Preference number: 3 (lower is better)
Translates to: GTLVKSVFQVYF*SWVNCEGIGNY
Trigger: ATAATTTCCAATGCCTTCACAATTTACCCATGACCAGAAATATACTTGGAAGACTGATTTCACAAGTGTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382065.8
3UTR-3UTR CAA 90 bp CAAACATACCAAAGCAAGAAATTGTCTCTGGCCATCAGATATTATCTTTTCCACACTCAAGTGCTTCGTTaGCAGAGTTGTTTTAAGATT +
Preference number: 3 (lower is better)
Translates to: QTYQSKKLSLAIRYYLFHTQVLR*QSCFKI
Trigger: AATCTTAAAACAACTCTGCAAACGAAGCACTTGAGT...GTGGAAAAGATAATATCTGATGGCCAGAGACAATTTCTTGCTTTGGTATGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR CCA 90 bp CTAGTGCCCCTGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCGTTTCCATGGTTTCCTaGAATGCCAGGAGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: LVPLFLPQPCHITTSDSLVSMVS*NARRAR
Trigger: CCGGGCCCTCCTGGCATTCCAGGAAACCATGGAAAC...GAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACAGGGGCACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp CTAGTGCCCCTGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCATTAGCTGGTCCTGGTaGTGGGCGCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LVPLFLPQPCHITTSDSLISWSW*WAPVVP
Trigger: TGGGACTACAGGCGCCCACCACCAGGACCAGCTAAT...GAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACAGGGGCACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR CCA 90 bp CTAGTGCCCCTGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCTTTAGAATTTGCGGCTaGGTGCGGGGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: LVPLFLPQPCHITTSDSLFRICG*VRGLTP
Trigger: AGGCGTGAGCCCCCGCACCCAGCCGCAAATTCTAAA...GAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACAGGGGCACTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR GCA 90 bp TCATATGACCCTGCTGTGTGCCCAAGTCACCTATTCACATGGCTGTTCACATCACATGGTTTCCTGGAATaGCAGGAGGGCCCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SYDPAVCPSHLFTWLFTSHGFLE*QEGPVA
Trigger: GGCCACCGGGCCCTCCTGGCATTCCAGGAAACCATG...TGATGTGAACAGCCATGTGAATAGGTGACTTGGGCACACAGCAGGGTCATATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp CTAGTGCCCCTGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCCCGGTTTGTGGAGACTaGCCCCAGAATGTGGTGATC +
Preference number: 4 (lower is better)
Translates to: LVPLFLPQPCHITTSDSLPVCGD*PQNVVI
Trigger: GATCACCACATTCTGGGGCCAGTCTCCACAAACCGG...GAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACAGGGGCACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR TCA 90 bp CCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTATAGGCGGAGGCTGCGGTaGGCTGAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: PQIVTNQLSYKSSPKWSYRRRLR*AEIMPL
Trigger: CAGTGGCATGATCTCAGCTCACCGCAGCCTCCGCCT...ATAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR GCA 90 bp TCCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTACCAGGAGGCGGAGGCTaGGGTGAGCTGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: SSDRNKSAQLQVFPKVELPGGGG*GELRSC
Trigger: GCATGATCTCAGCTCACCGCAGCCTCCGCCTCCTGG...TAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR CCA 90 bp CTAGTGCCCCTGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCCAGAATGTGGTGATCTaGGCTAGGTCATCTACCTCG +
Preference number: 4 (lower is better)
Translates to: LVPLFLPQPCHITTSDSLQNVVI*ARSSTS
Trigger: CGAGGTAGATGACCTAGCCCAGATCACCACATTCTG...GAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACAGGGGCACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR TCA 90 bp CCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTATGCCTCAGAGTCTCCCTaGGAAGACAGCAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PQIVTNQLSYKSSPKWSYASESP*EDSRAP
Trigger: TGGAGCTCTGCTGTCTTCTCAGGGAGACTCTGAGGC...ATAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp CTAGTGCCCCTGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCTTTTCTGAAGTCATATaGCCCTGCTGTGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: LVPLFLPQPCHITTSDSLFSEVI*PCCVPK
Trigger: CTTGGGCACACAGCAGGGTCATATGACTTCAGAAAA...GAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACAGGGGCACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR GCA 90 bp TCATATGACCCTGCTGTGTGCCCAAGTCACCTATTCACATGGCTGTTCACATCACATGGAGAGCGCCATTaGCCATTCGCAGCCAAACCT +
Preference number: 4 (lower is better)
Translates to: SYDPAVCPSHLFTWLFTSHGERH*PFAAKP
Trigger: AGGTTTGGCTGCGAATGGGCAATGGCGCTCTCCATG...TGATGTGAACAGCCATGTGAATAGGTGACTTGGGCACACAGCAGGGTCATATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp TGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAAGAGCTCCAGGAGCGTaGTCTCCTCGGGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: CSCPSPVISLHPILSNVIRAPGA*SPRADA
Trigger: GGCATCTGCCCGAGGAGACCACGCTCCTGGAGCTCT...TATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp TCCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTAGTTTCCATGGTTTCCTaGAATGCCAGGAGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: SSDRNKSAQLQVFPKVELVSMVS*NARRAR
Trigger: CCGGGCCCTCCTGGCATTCCAGGAAACCATGGAAAC...TAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp CTAGTGCCCCTGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCCTCCTTCATGACCAGTaGCTCCATTGTTGCCATTGT +
Preference number: 4 (lower is better)
Translates to: LVPLFLPQPCHITTSDSLLLHDQ*LHCCHC
Trigger: ACAATGGCAACAATGGAGCCACTGGTCATGAAGGAG...GAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACAGGGGCACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp CTAGTGCCCCTGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAACCTCATCCCCTTTaGCTAGCTTCAGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: LVPLFLPQPCHITTSDSLKPHPL*LASAQH
Trigger: ATGCTGTGCTGAAGCTAGCCAAAGGGGATGAGGTTT...GAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACAGGGGCACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp TCATATGACCCTGCTGTGTGCCCAAGTCACCTATTCACATGGCTGTTCACATCAGGAATCCTGCAAAGGTaGAGAAGCGTTGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: SYDPAVCPSHLFTWLFTSGILQR*RSVGGP
Trigger: GGGACCACCAACGCTTCTCCACCTTTGCAGGATTCC...TGATGTGAACAGCCATGTGAATAGGTGACTTGGGCACACAGCAGGGTCATATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR GCA 90 bp CTAGTGCCCCTGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCCAGAGAAGCCATGAATaGAATCTGAAGTTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LVPLFLPQPCHITTSDSLQRSHE*NLKFWW
Trigger: CCACCAGAACTTCAGATTGCATTCATGGCTTCTCTG...GAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACAGGGGCACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR GCA 90 bp CCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTATCCGCTACGGCCAGTCTaGTGGTGGCTTTGCACTATT +
Preference number: 4 (lower is better)
Translates to: PQIVTNQLSYKSSPKWSYPLRPV*WWLCTI
Trigger: AATAGTGCAAAGCCACCAGCAGACTGGCCGTAGCGG...ATAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR CCA 90 bp TGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAAAGAATAGAGCTCCAGGAGCGTaGTCTCCTCGGGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: CPSPVISLHPILSNVIKNRAPGA*SPRADA
Trigger: GGCATCTGCCCGAGGAGACCACGCTCCTGGAGCTCT...ATTCTTTATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp TCCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTACGCCCTTCTCACCTTTaGCTCCTTCATGACCAGTGG +
Preference number: 4 (lower is better)
Translates to: SSDRNKSAQLQVFPKVELRPSHL*LLHDQW
Trigger: CCACTGGTCATGAAGGAGCCAAAGGTGAGAAGGGCG...TAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp TCATATGACCCTGCTGTGTGCCCAAGTCACCTATTCACATGGCTGTTCACATCATGCAATCTGAAGTTCTaGTGGAATCCCCGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: SYDPAVCPSHLFTWLFTSCNLKF*WNPRVA
Trigger: GGCTACCCGGGGATTCCACCAGAACTTCAGATTGCA...TGATGTGAACAGCCATGTGAATAGGTGACTTGGGCACACAGCAGGGTCATATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp TCCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTAGGAATCCTGCAAAGGTaGAGAAGCGTTGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: SSDRNKSAQLQVFPKVELGILQR*RSVGGP
Trigger: GGGACCACCAACGCTTCTCCACCTTTGCAGGATTCC...TAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp TGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAGCCTCAGAGTCTCCCTaGGAAGACAGCAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: CSCPSPVISLHPILSNVIASESP*EDSRAP
Trigger: TGGAGCTCTGCTGTCTTCTCAGGGAGACTCTGAGGC...TATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp TCCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTACCTTTGGCTCCTTCATaGCCAGTGGCTCCATTGTTG +
Preference number: 4 (lower is better)
Translates to: SSDRNKSAQLQVFPKVELPLAPS*PVAPLL
Trigger: CAACAATGGAGCCACTGGTCATGAAGGAGCCAAAGG...TAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR GCA 90 bp TCATATGACCCTGCTGTGTGCCCAAGTCACCTATTCACATGGCTGTTCACATCACATGACAACACTTACTaGAGTCTGGGGGTAGTCCTC +
Preference number: 4 (lower is better)
Translates to: SYDPAVCPSHLFTWLFTSHDNTY*SLGVVL
Trigger: GAGGACTACCCCCAGACTGCAGTAAGTGTTGTCATG...TGATGTGAACAGCCATGTGAATAGGTGACTTGGGCACACAGCAGGGTCATATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR GCA 90 bp CTAGTGCCCCTGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCTCAGCACAGCATGATTaGTGGATGTATCTGATTTGC +
Preference number: 4 (lower is better)
Translates to: LVPLFLPQPCHITTSDSLSAQHD*WMYLIC
Trigger: GCAAATCAGATACATCCAGCAATCATGCTGTGCTGA...GAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACAGGGGCACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp TTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTCATCAGCCCTTCTCTCCTTTaGGGCCATGCTGCCCCCGCT +
Preference number: 4 (lower is better)
Translates to: LGAKERVIKMLSILVKVISPSLL*GHAAPA
Trigger: AGCGGGGGCAGCATGGCCCCAAAGGAGAGAAGGGCT...GATGACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp TGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAAAGAATGTGGAGAAGCGTTGGTaGTCCCCATGGAGAGCGCCA +
Preference number: 4 (lower is better)
Translates to: CPSPVISLHPILSNVIKNVEKRW*SPWRAP
Trigger: TGGCGCTCTCCATGGGGACCACCAACGCTTCTCCAC...ATTCTTTATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR GCA 90 bp TCTTTTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTCATGGTTTCCTGGAATaGCAGGAGGGCCCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SFRCQGKSDKDAEYISQGHGFLE*QEGPVA
Trigger: GGCCACCGGGCCCTCCTGGCATTCCAGGAAACCATG...ACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR GCA 90 bp CTAGTGCCCCTGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCACTGTGTTGCCATTGTaGATAAGGTACACATACACT +
Preference number: 4 (lower is better)
Translates to: LVPLFLPQPCHITTSDSLTVLPL*IRYTYT
Trigger: AGTGTATGTGTACCTTATGCACAATGGCAACACAGT...GAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACAGGGGCACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp TCATATGACCCTGCTGTGTGCCCAAGTCACCTATTCACATGGCTGTTCACATCACTCCTTCATGACCAGTaGCTCCATTGTTGCCATTGT +
Preference number: 4 (lower is better)
Translates to: SYDPAVCPSHLFTWLFTSLLHDQ*LHCCHC
Trigger: ACAATGGCAACAATGGAGCCACTGGTCATGAAGGAG...TGATGTGAACAGCCATGTGAATAGGTGACTTGGGCACACAGCAGGGTCATATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp TGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAAAGAATCGTTGGTGGTCCCCATaGAGAGCGCCATTGCCCATT +
Preference number: 4 (lower is better)
Translates to: CPSPVISLHPILSNVIKNRWWSP*RAPLPI
Trigger: AATGGGCAATGGCGCTCTCCATGGGGACCACCAACG...ATTCTTTATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp TTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTCATCGTGGAGAAGCGTTGGTaGTCCCCATGGAGAGCGCCA +
Preference number: 4 (lower is better)
Translates to: LGAKERVIKMLSILVKVIVEKRW*SPWRAP
Trigger: TGGCGCTCTCCATGGGGACCACCAACGCTTCTCCAC...GATGACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp TCCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTACTACGGCCAGTCTGCTaGTGGCTTTGCACTATTCTT +
Preference number: 4 (lower is better)
Translates to: SSDRNKSAQLQVFPKVELLRPVC*WLCTIL
Trigger: AAGAATAGTGCAAAGCCACCAGCAGACTGGCCGTAG...TAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR TCA 90 bp TCCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTAATAATCCCACTGTTCTaGTTGCTGAAGTGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: SSDRNKSAQLQVFPKVELIIPLF*LLKWVA
Trigger: GGCAACCCACTTCAGCAATCAGAACAGTGGGATTAT...TAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp CTAGTGCCCCTGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCCAAATCTACCAGTCATaGCATCAAAGAAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: LVPLFLPQPCHITTSDSLQIYQS*HQRSFQ
Trigger: TTGGAAACTTCTTTGATGTCATGACTGGTAGATTTG...GAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACAGGGGCACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp TCCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTAGAAGAAATACACACCTaGTACTGGGGCCCCAAATCT +
Preference number: 4 (lower is better)
Translates to: SSDRNKSAQLQVFPKVELEEIHT*YWGPKS
Trigger: AGATTTGGGGCCCCAGTATCAGGTGTGTATTTCTTC...TAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp TGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAAAGAATGGCCCCAGAATGTGGTaGTCTGGGCTAGGTCATCTA +
Preference number: 4 (lower is better)
Translates to: CPSPVISLHPILSNVIKNGPRMW*SGLGHL
Trigger: TAGATGACCTAGCCCAGATCACCACATTCTGGGGCC...ATTCTTTATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR GCA 90 bp CCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTATTATGACCCTGCTGTGTaGCCAAGTCACCTATTCACA +
Preference number: 4 (lower is better)
Translates to: PQIVTNQLSYKSSPKWSYYDPAV*PSHLFT
Trigger: TGTGAATAGGTGACTTGGGCACACAGCAGGGTCATA...ATAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR GCA 90 bp CCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTATACACCTGGGACTTGTTaGCTACAACCAAACCTTGTG +
Preference number: 4 (lower is better)
Translates to: PQIVTNQLSYKSSPKWSYTPGTC*LQPNLV
Trigger: CACAAGGTTTGGTTGTAGGCAACAAGTCCCAGGTGT...ATAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR CCA 90 bp TGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAAAGAATCGCCCTTCTCACCTTTaGCTCCTTCATGACCAGTGG +
Preference number: 4 (lower is better)
Translates to: CPSPVISLHPILSNVIKNRPSHL*LLHDQW
Trigger: CCACTGGTCATGAAGGAGCCAAAGGTGAGAAGGGCG...ATTCTTTATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp AAATTGTCTCTGGCCATCAGATATTATCTTTTCCACAAGCTTTTCTTATGCTCTAGCCCTTCTCTCCTTTaGGGCCATGCTGCCCCCGCT +
Preference number: 4 (lower is better)
Translates to: KLSLAIRYYLFHKLFLCSSPSLL*GHAAPA
Trigger: AGCGGGGGCAGCATGGCCCCAAAGGAGAGAAGGGCT...AGAGCATAAGAAAAGCTTGTGGAAAAGATAATATCTGATGGCCAGAGACAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR CCA 90 bp CCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTATAAACCTCATCCCCTTTaGCTAGCTTCAGCACAGCAT +
Preference number: 4 (lower is better)
Translates to: PQIVTNQLSYKSSPKWSYKPHPL*LASAQH
Trigger: ATGCTGTGCTGAAGCTAGCCAAAGGGGATGAGGTTT...ATAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp TTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTCATCTCACTTTCTCCCTCCTaGAGCCGCTACGGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: LGAKERVIKMLSILVKVISLSPS*SRYGQS
Trigger: AGACTGGCCGTAGCGGCTCCAGGAGGGAGAAAGTGA...GATGACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR CCA 90 bp CCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTATAATTTCCCACACACCTaGGACTTGTTGCCTACAACC +
Preference number: 4 (lower is better)
Translates to: PQIVTNQLSYKSSPKWSYNFPHT*DLLPTT
Trigger: GGTTGTAGGCAACAAGTCCCAGGTGTGTGGGAAATT...ATAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR CCA 90 bp AAATTGTCTCTGGCCATCAGATATTATCTTTTCCACAAGCTTTTCTTATGCTCTAGCTGGTCCTGGTGGTaGGCGCCTGTAGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: KLSLAIRYYLFHKLFLCSSWSWW*APVVPA
Trigger: AGCTGGGACTACAGGCGCCCACCACCAGGACCAGCT...AGAGCATAAGAAAAGCTTGTGGAAAAGATAATATCTGATGGCCAGAGACAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR CCA 90 bp TGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAAAAATTAGCTGGTCCTaGTGGTGGGCGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: CSCPSPVISLHPILSNVIKISWS*WWAPVV
Trigger: GACTACAGGCGCCCACCACCAGGACCAGCTAATTTT...TATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR TCA 90 bp TGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAAAGAATCCTTTGGCTCCTTCATaGCCAGTGGCTCCATTGTTG +
Preference number: 4 (lower is better)
Translates to: CPSPVISLHPILSNVIKNPLAPS*PVAPLL
Trigger: CAACAATGGAGCCACTGGTCATGAAGGAGCCAAAGG...ATTCTTTATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp TCCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTATTGCCAGAGAAGCCATaGATGCAATCTGAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SSDRNKSAQLQVFPKVELLPEKP*MQSEVL
Trigger: CAGAACTTCAGATTGCATTCATGGCTTCTCTGGCAA...TAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp TGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAGGTCAAAGGCTAAGCTaGACACGGAGGGCACTAAAT +
Preference number: 4 (lower is better)
Translates to: CSCPSPVISLHPILSNVIGQRLS*TRRALN
Trigger: ATTTAGTGCCCTCCGTGTTCAGCTTAGCCTTTGACC...TATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp AAATTGTCTCTGGCCATCAGATATTATCTTTTCCACAAGCTTTTCTTATGCTCTGAGGCTGCGGTGAGCTaGGATCATGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: KLSLAIRYYLFHKLFLCSEAAVS*DHATAL
Trigger: GAGTGCAGTGGCATGATCTCAGCTCACCGCAGCCTC...AGAGCATAAGAAAAGCTTGTGGAAAAGATAATATCTGATGGCCAGAGACAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR GCA 90 bp TCCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTACAGTGGCTCCATTGTTaGCATTGTTTCCATGGTTTC +
Preference number: 4 (lower is better)
Translates to: SSDRNKSAQLQVFPKVELQWLHC*HCFHGF
Trigger: GAAACCATGGAAACAATGGCAACAATGGAGCCACTG...TAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR GCA 90 bp TGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATATTAAGATTTAGAATTTaGGGCTGGGTGCGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: CSCPSPVISLHPILSNVILRFRI*GWVRGL
Trigger: GAGCCCCCGCACCCAGCCGCAAATTCTAAATCTTAA...TATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR CCA 90 bp TGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAAAGAATTGCAATCTGAAGTTCTaGTGGAATCCCCGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: CPSPVISLHPILSNVIKNCNLKF*WNPRVA
Trigger: GGCTACCCGGGGATTCCACCAGAACTTCAGATTGCA...ATTCTTTATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp CAAACATACCAAAGCAAGAAATTGTCTCTGGCCATCAGATATTATCTTTTCCACCGTTGGTGGTCCCCATaGAGAGCGCCATTGCCCATT +
Preference number: 4 (lower is better)
Translates to: QTYQSKKLSLAIRYYLFHRWWSP*RAPLPI
Trigger: AATGGGCAATGGCGCTCTCCATGGGGACCACCAACG...GTGGAAAAGATAATATCTGATGGCCAGAGACAATTTCTTGCTTTGGTATGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR CCA 90 bp TCTTTTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTAAGGTGGAGAAGCGTTaGTGGTCCCCATGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: SFRCQGKSDKDAEYISQGKVEKR*WSPWRA
Trigger: CGCTCTCCATGGGGACCACCAACGCTTCTCCACCTT...ACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp TCATATGACCCTGCTGTGTGCCCAAGTCACCTATTCACATGGCTGTTCACATCAAGTCACCTATTCACATaGCTGTTCACATCATCTGCA +
Preference number: 4 (lower is better)
Translates to: SYDPAVCPSHLFTWLFTSSHLFT*LFTSSA
Trigger: TGCAGATGATGTGAACAGCCATGTGAATAGGTGACT...TGATGTGAACAGCCATGTGAATAGGTGACTTGGGCACACAGCAGGGTCATATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp TGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAGAAGAAATACACACCTaGTACTGGGGCCCCAAATCT +
Preference number: 4 (lower is better)
Translates to: CSCPSPVISLHPILSNVIEEIHT*YWGPKS
Trigger: AGATTTGGGGCCCCAGTATCAGGTGTGTATTTCTTC...TATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp TGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATATGTTTCTCTCTCCTGTaGATTCCTAGCCCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: CSCPSPVISLHPILSNVICFSLL*IPSPLP
Trigger: AGGCAAAGGGCTAGGAATTCACAGGAGAGAGAAACA...TATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR GCA 90 bp TGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATATATGACCCTGCTGTGTaGCCAAGTCACCTATTCACA +
Preference number: 4 (lower is better)
Translates to: CSCPSPVISLHPILSNVIYDPAV*PSHLFT
Trigger: TGTGAATAGGTGACTTGGGCACACAGCAGGGTCATA...TATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR GCA 90 bp TGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAAAGAATGTCTGCTGGTGGCTTTaGACTATTCTTGCCACCACT +
Preference number: 4 (lower is better)
Translates to: CPSPVISLHPILSNVIKNVCWWL*TILATT
Trigger: AGTGGTGGCAAGAATAGTGCAAAGCCACCAGCAGAC...ATTCTTTATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR GCA 90 bp CAAACATACCAAAGCAAGAAATTGTCTCTGGCCATCAGATATTATCTTTTCCACTCATCTACCTCGGGGTaGGGTAGCTCATCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: QTYQSKKLSLAIRYYLFHSSTSG*GSSSGL
Trigger: GAGACCAGATGAGCTACCGCACCCCGAGGTAGATGA...GTGGAAAAGATAATATCTGATGGCCAGAGACAATTTCTTGCTTTGGTATGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR CCA 90 bp TCCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTAGAGAAGACTATTTTGTaGTTGATTCTTCTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SSDRNKSAQLQVFPKVELEKTIL*LILLSP
Trigger: GGGGCTCAGAAGAATCAACCACAAAATAGTCTTCTC...TAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp TCCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTAAGTCACCTATTCACATaGCTGTTCACATCATCTGCA +
Preference number: 4 (lower is better)
Translates to: SSDRNKSAQLQVFPKVELSHLFT*LFTSSA
Trigger: TGCAGATGATGTGAACAGCCATGTGAATAGGTGACT...TAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp TGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAAAGAATGTCCCAGTTTTAGGATaGCTCCGCTCTCTCACTTTC +
Preference number: 4 (lower is better)
Translates to: CPSPVISLHPILSNVIKNVPVLG*LRSLTF
Trigger: GAAAGTGAGAGAGCGGAGCCATCCTAAAACTGGGAC...ATTCTTTATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR TCA 90 bp TTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTCATCGCCATGAATGCAATCTaGAGTTCTGGTGGAATCCCC +
Preference number: 4 (lower is better)
Translates to: LGAKERVIKMLSILVKVIAMNAI*SSGGIP
Trigger: GGGGATTCCACCAGAACTTCAGATTGCATTCATGGC...GATGACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp TGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATACATAGCTGTACATGCTaGAGACTGTGTTGCCATTGT +
Preference number: 4 (lower is better)
Translates to: CSCPSPVISLHPILSNVIHSCTC*RLCCHC
Trigger: ACAATGGCAACACAGTCTTCAGCATGTACAGCTATG...TATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp TCATATGACCCTGCTGTGTGCCCAAGTCACCTATTCACATGGCTGTTCACATCAATTGCTGGATGTATCTaGTTTGCCCTTCATTTCATA +
Preference number: 4 (lower is better)
Translates to: SYDPAVCPSHLFTWLFTSIAGCI*FALHFI
Trigger: TATGAAATGAAGGGCAAATCAGATACATCCAGCAAT...TGATGTGAACAGCCATGTGAATAGGTGACTTGGGCACACAGCAGGGTCATATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp TCATATGACCCTGCTGTGTGCCCAAGTCACCTATTCACATGGCTGTTCACATCATTAGTCAAGGTCATCTaGGAAGACTATTTTGTGGTT +
Preference number: 4 (lower is better)
Translates to: SYDPAVCPSHLFTWLFTSLVKVI*EDYFVV
Trigger: AACCACAAAATAGTCTTCTCAGATGACCTTGACTAA...TGATGTGAACAGCCATGTGAATAGGTGACTTGGGCACACAGCAGGGTCATATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR GCA 90 bp TGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAAAGAATATTGCTGAAGTGGGTTaGCAGAGAAGCCATGAATGC +
Preference number: 4 (lower is better)
Translates to: CPSPVISLHPILSNVIKNIAEVG*QRSHEC
Trigger: GCATTCATGGCTTCTCTGGCAACCCACTTCAGCAAT...ATTCTTTATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR GCA 90 bp AAATTGTCTCTGGCCATCAGATATTATCTTTTCCACAAGCTTTTCTTATGCTCTCATGGAGAGCGCCATTaGCCATTCGCAGCCAAACCT +
Preference number: 4 (lower is better)
Translates to: KLSLAIRYYLFHKLFLCSHGERH*PFAAKP
Trigger: AGGTTTGGCTGCGAATGGGCAATGGCGCTCTCCATG...AGAGCATAAGAAAAGCTTGTGGAAAAGATAATATCTGATGGCCAGAGACAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR GCA 90 bp TCATATGACCCTGCTGTGTGCCCAAGTCACCTATTCACATGGCTGTTCACATCAGCTTTGCACTATTCTTaGCACCACTTTATTAGTTCT +
Preference number: 4 (lower is better)
Translates to: SYDPAVCPSHLFTWLFTSALHYS*HHFISS
Trigger: AGAACTAATAAAGTGGTGGCAAGAATAGTGCAAAGC...TGATGTGAACAGCCATGTGAATAGGTGACTTGGGCACACAGCAGGGTCATATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR GCA 90 bp CCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTATAAGCAGAAACTCAAGTaGTTCGTTTGCAGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: PQIVTNQLSYKSSPKWSYKQKLK*FVCRVV
Trigger: AACAACTCTGCAAACGAAGCACTTGAGTTTCTGCTT...ATAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR CCA 90 bp TGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATATTGCCATTGTTTCCATaGTTTCCTGGAATGCCAGGA +
Preference number: 4 (lower is better)
Translates to: CSCPSPVISLHPILSNVILPLFP*FPGMPG
Trigger: TCCTGGCATTCCAGGAAACCATGGAAACAATGGCAA...TATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp TTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTCATCAATCTGAAGTTCTGGTaGAATCCCCGGGTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: LGAKERVIKMLSILVKVINLKFW*NPRVAL
Trigger: AAGGGCTACCCGGGGATTCCACCAGAACTTCAGATT...GATGACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp TGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAAAGAATTTGCCAGAGAAGCCATaGATGCAATCTGAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: CPSPVISLHPILSNVIKNLPEKP*MQSEVL
Trigger: CAGAACTTCAGATTGCATTCATGGCTTCTCTGGCAA...ATTCTTTATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp TCTTTTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTCACTGTTCTGATTGCTaGAGTGGGTTGCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: SFRCQGKSDKDAEYISQGHCSDC*SGLPEK
Trigger: CTTCTCTGGCAACCCACTTCAGCAATCAGAACAGTG...ACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp CAAACATACCAAAGCAAGAAATTGTCTCTGGCCATCAGATATTATCTTTTCCACCACTGTTCTGATTGCTaGAGTGGGTTGCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: QTYQSKKLSLAIRYYLFHHCSDC*SGLPEK
Trigger: CTTCTCTGGCAACCCACTTCAGCAATCAGAACAGTG...GTGGAAAAGATAATATCTGATGGCCAGAGACAATTTCTTGCTTTGGTATGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR TCA 90 bp CCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTATCAAATCTACCAGTCATaGCATCAAAGAAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: PQIVTNQLSYKSSPKWSYQIYQS*HQRSFQ
Trigger: TTGGAAACTTCTTTGATGTCATGACTGGTAGATTTG...ATAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp TGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAAAGAATAGCTTCAGCACAGCATaGTTGCTGGATGTATCTGAT +
Preference number: 4 (lower is better)
Translates to: CPSPVISLHPILSNVIKNSFSTA*LLDVSD
Trigger: ATCAGATACATCCAGCAATCATGCTGTGCTGAAGCT...ATTCTTTATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp TCTTTTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTGGTCAAAGGCTAAGCTaGACACGGAGGGCACTAAAT +
Preference number: 4 (lower is better)
Translates to: SFRCQGKSDKDAEYISQGGQRLS*TRRALN
Trigger: ATTTAGTGCCCTCCGTGTTCAGCTTAGCCTTTGACC...ACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR GCA 90 bp TTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTCATCATTGCTGAAGTGGGTTaGCAGAGAAGCCATGAATGC +
Preference number: 4 (lower is better)
Translates to: LGAKERVIKMLSILVKVIIAEVG*QRSHEC
Trigger: GCATTCATGGCTTCTCTGGCAACCCACTTCAGCAAT...GATGACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR GCA 90 bp TGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAAAGAATTCCTCAACATCCTCATaGTTCATCATGCTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: CPSPVISLHPILSNVIKNSSTSS*FIMLKV
Trigger: CACCTTCAGCATGATGAAGCATGAGGATGTTGAGGA...ATTCTTTATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR GCA 90 bp TCCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTAGAATTGTACTTTAAATaGCATAGGAGTGCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: SSDRNKSAQLQVFPKVELELYFK*HRSAWN
Trigger: ATTCCAGGCACTCCTATGGCATTTAAAGTACAATTC...TAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR CCA 90 bp TCTTTTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTAATCTGAAGTTCTGGTaGAATCCCCGGGTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SFRCQGKSDKDAEYISQGNLKFW*NPRVAL
Trigger: AAGGGCTACCCGGGGATTCCACCAGAACTTCAGATT...ACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp CCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTATTTAGCATCTCAGTTTTaGGACACTTGTGAAATCAGT +
Preference number: 4 (lower is better)
Translates to: PQIVTNQLSYKSSPKWSYLASQF*DTCEIS
Trigger: ACTGATTTCACAAGTGTCCCAAAACTGAGATGCTAA...ATAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR CCA 90 bp TTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTCATCTGCCATAGGAGTGCCTaGAATAGCACAGTATCTTGC +
Preference number: 4 (lower is better)
Translates to: LGAKERVIKMLSILVKVICHRSA*NSTVSC
Trigger: GCAAGATACTGTGCTATTCCAGGCACTCCTATGGCA...GATGACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR TCA 90 bp CAAACATACCAAAGCAAGAAATTGTCTCTGGCCATCAGATATTATCTTTTCCACATAATCCCACTGTTCTaGTTGCTGAAGTGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: QTYQSKKLSLAIRYYLFHIIPLF*LLKWVA
Trigger: GGCAACCCACTTCAGCAATCAGAACAGTGGGATTAT...GTGGAAAAGATAATATCTGATGGCCAGAGACAATTTCTTGCTTTGGTATGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR TCA 90 bp TTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTCATCGGTGTACCTGTAGCGTaGACAACATTGCAACCAATA +
Preference number: 4 (lower is better)
Translates to: LGAKERVIKMLSILVKVIGVPVA*TTLQPI
Trigger: TATTGGTTGCAATGTTGTTCACGCTACAGGTACACC...GATGACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp TCTTTTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTTTTTCTGAAGTCATATaGCCCTGCTGTGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: SFRCQGKSDKDAEYISQGFSEVI*PCCVPK
Trigger: CTTGGGCACACAGCAGGGTCATATGACTTCAGAAAA...ACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR GCA 90 bp AAATTGTCTCTGGCCATCAGATATTATCTTTTCCACAAGCTTTTCTTATGCTCTCATGACAACACTTACTaGAGTCTGGGGGTAGTCCTC +
Preference number: 4 (lower is better)
Translates to: KLSLAIRYYLFHKLFLCSHDNTY*SLGVVL
Trigger: GAGGACTACCCCCAGACTGCAGTAAGTGTTGTCATG...AGAGCATAAGAAAAGCTTGTGGAAAAGATAATATCTGATGGCCAGAGACAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR GCA 90 bp TGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAAAGAATTCAGCACAGCATGATTaGTGGATGTATCTGATTTGC +
Preference number: 4 (lower is better)
Translates to: CPSPVISLHPILSNVIKNSAQHD*WMYLIC
Trigger: GCAAATCAGATACATCCAGCAATCATGCTGTGCTGA...ATTCTTTATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp TCCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTAGTATATTTCTGGTCATaGGTAAATTGTGAAGGCATT +
Preference number: 4 (lower is better)
Translates to: SSDRNKSAQLQVFPKVELVYFWS*VNCEGI
Trigger: AATGCCTTCACAATTTACCCATGACCAGAAATATAC...TAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR CCA 90 bp CAAACATACCAAAGCAAGAAATTGTCTCTGGCCATCAGATATTATCTTTTCCACACATTAAAAATTAGCTaGTCCTGGTGGTGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: QTYQSKKLSLAIRYYLFHTLKIS*SWWWAP
Trigger: AGGCGCCCACCACCAGGACCAGCTAATTTTTAATGT...GTGGAAAAGATAATATCTGATGGCCAGAGACAATTTCTTGCTTTGGTATGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR TCA 90 bp TCTTTTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTCATAGCTGTACATGCTaGAGACTGTGTTGCCATTGT +
Preference number: 4 (lower is better)
Translates to: SFRCQGKSDKDAEYISQGHSCTC*RLCCHC
Trigger: ACAATGGCAACACAGTCTTCAGCATGTACAGCTATG...ACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp TCTTTTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTAGCTTCAGCACAGCATaGTTGCTGGATGTATCTGAT +
Preference number: 4 (lower is better)
Translates to: SFRCQGKSDKDAEYISQGSFSTA*LLDVSD
Trigger: ATCAGATACATCCAGCAATCATGCTGTGCTGAAGCT...ACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp CAAACATACCAAAGCAAGAAATTGTCTCTGGCCATCAGATATTATCTTTTCCACGGTGTACCTGTAGCGTaGACAACATTGCAACCAATA +
Preference number: 4 (lower is better)
Translates to: QTYQSKKLSLAIRYYLFHGVPVA*TTLQPI
Trigger: TATTGGTTGCAATGTTGTTCACGCTACAGGTACACC...GTGGAAAAGATAATATCTGATGGCCAGAGACAATTTCTTGCTTTGGTATGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR GCA 90 bp CAAACATACCAAAGCAAGAAATTGTCTCTGGCCATCAGATATTATCTTTTCCACTCCTCAACATCCTCATaGTTCATCATGCTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: QTYQSKKLSLAIRYYLFHSSTSS*FIMLKV
Trigger: CACCTTCAGCATGATGAAGCATGAGGATGTTGAGGA...GTGGAAAAGATAATATCTGATGGCCAGAGACAATTTCTTGCTTTGGTATGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR CCA 90 bp TTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTCATCGAGAAGACTATTTTGTaGTTGATTCTTCTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LGAKERVIKMLSILVKVIEKTIL*LILLSP
Trigger: GGGGCTCAGAAGAATCAACCACAAAATAGTCTTCTC...GATGACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp TTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTCATCGTTTTGGGACACTTGTaGAATCAGTCTTCCAAGTAT +
Preference number: 4 (lower is better)
Translates to: LGAKERVIKMLSILVKVIVLGHL*NQSSKY
Trigger: ATACTTGGAAGACTGATTTCACAAGTGTCCCAAAAC...GATGACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR GCA 90 bp AAATTGTCTCTGGCCATCAGATATTATCTTTTCCACAAGCTTTTCTTATGCTCTCAGAGAAGCCATGAATaGAATCTGAAGTTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: KLSLAIRYYLFHKLFLCSQRSHE*NLKFWW
Trigger: CCACCAGAACTTCAGATTGCATTCATGGCTTCTCTG...AGAGCATAAGAAAAGCTTGTGGAAAAGATAATATCTGATGGCCAGAGACAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR GCA 90 bp TTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTCATCACTGTGTTGCCATTGTaGATAAGGTACACATACACT +
Preference number: 4 (lower is better)
Translates to: LGAKERVIKMLSILVKVITVLPL*IRYTYT
Trigger: AGTGTATGTGTACCTTATGCACAATGGCAACACAGT...GATGACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp TGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAAAGAATAAGTCTTCCCCAAAGTaGAGCTATTCTAGTCATATA +
Preference number: 4 (lower is better)
Translates to: CPSPVISLHPILSNVIKNKSSPK*SYSSHI
Trigger: TATATGACTAGAATAGCTCCACTTTGGGGAAGACTT...ATTCTTTATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp AAATTGTCTCTGGCCATCAGATATTATCTTTTCCACAAGCTTTTCTTATGCTCTACCATATTACATCCCTaGAGCAAGCAGAAACTCAAG +
Preference number: 4 (lower is better)
Translates to: KLSLAIRYYLFHKLFLCSTILHP*SKQKLK
Trigger: CTTGAGTTTCTGCTTGCTTCAGGGATGTAATATGGT...AGAGCATAAGAAAAGCTTGTGGAAAAGATAATATCTGATGGCCAGAGACAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR CCA 90 bp TCTTTTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTATTGTCCAACATTATTaGTGTACCTGTAGCGTGAAC +
Preference number: 4 (lower is better)
Translates to: SFRCQGKSDKDAEYISQGIVQHY*CTCSVN
Trigger: GTTCACGCTACAGGTACACCAATAATGTTGGACAAT...ACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CCA 90 bp TGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAAAGAATCATTTGAATATCTATTaGCACTGTACCTCTATGAGA +
Preference number: 4 (lower is better)
Translates to: CPSPVISLHPILSNVIKNHLNIY*HCTSMR
Trigger: TCTCATAGAGGTACAGTGCCAATAGATATTCAAATG...ATTCTTTATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp TCTTTTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTATTGCTGGATGTATCTaGTTTGCCCTTCATTTCATA +
Preference number: 4 (lower is better)
Translates to: SFRCQGKSDKDAEYISQGIAGCI*FALHFI
Trigger: TATGAAATGAAGGGCAAATCAGATACATCCAGCAAT...ACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp TCTTTTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTTTAGTCAAGGTCATCTaGGAAGACTATTTTGTGGTT +
Preference number: 4 (lower is better)
Translates to: SFRCQGKSDKDAEYISQGLVKVI*EDYFVV
Trigger: AACCACAAAATAGTCTTCTCAGATGACCTTGACTAA...ACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR TCA 90 bp CAAACATACCAAAGCAAGAAATTGTCTCTGGCCATCAGATATTATCTTTTCCACAGGCTGATCATTATGTaGAACAGTTCTACACCATAT +
Preference number: 4 (lower is better)
Translates to: QTYQSKKLSLAIRYYLFHRLIIM*NSSTPY
Trigger: ATATGGTGTAGAACTGTTTCACATAATGATCAGCCT...GTGGAAAAGATAATATCTGATGGCCAGAGACAATTTCTTGCTTTGGTATGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR GCA 90 bp AAATTGTCTCTGGCCATCAGATATTATCTTTTCCACAAGCTTTTCTTATGCTCTGCATTGGAAATTATCTaGACCTTTTCCCATCTCTGT +
Preference number: 4 (lower is better)
Translates to: KLSLAIRYYLFHKLFLCSALEII*TFSHLC
Trigger: ACAGAGATGGGAAAAGGTGCAGATAATTTCCAATGC...AGAGCATAAGAAAAGCTTGTGGAAAAGATAATATCTGATGGCCAGAGACAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR GCA 90 bp TCTTTTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTCTCAAGTGCTTCGTTTaGAGAGTTGTTTTAAGATTT +
Preference number: 4 (lower is better)
Translates to: SFRCQGKSDKDAEYISQGLKCFV*RVVLRF
Trigger: AAATCTTAAAACAACTCTGCAAACGAAGCACTTGAG...ACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR CCA 90 bp TCTTTTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTCATTTGAATATCTATTaGCACTGTACCTCTATGAGA +
Preference number: 4 (lower is better)
Translates to: SFRCQGKSDKDAEYISQGHLNIY*HCTSMR
Trigger: TCTCATAGAGGTACAGTGCCAATAGATATTCAAATG...ACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
3UTR CAA 72 bp AATCCCTCTGGTCAACATGCAACATTTGAATATCTATaGGCACTGTACCTCTATGAGATATTTATGACATTT +
Preference number: 4 (lower is better)
Translates to: NPSGQHATFEYL*ALYLYEIFMTF
Trigger: AAATGTCATAAATATCTCATAGAGGTACAGTGCCAATAGATATTCAAATGTTGCATGTTGACCAGAGGGATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
3UTR CAA 72 bp TTCAGATATAAAATCCCTCTGGTCAACATGCAACATTaGAATATCTATTGGCACTGTACCTCTATGAGATAT +
Preference number: 4 (lower is better)
Translates to: FRYKIPLVNMQH*NIYWHCTSMRY
Trigger: ATATCTCATAGAGGTACAGTGCCAATAGATATTCAAATGTTGCATGTTGACCAGAGGGATTTTATATCTGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS GCA 90 bp CTGCAAAGGTGGAGAAGCGTTGGTGGTCCCCATGGAGAGCGCCATTaGCCATTCGCAGCCAAACCTCATCCCCTTTGGCTAGCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: LQRWRSVGGPHGERH*PFAAKPHPLWLASA
Trigger: TGCTGAAGCTAGCCAAAGGGGATGAGGTTTGGCTGCGAATGGGCAATGGCGCTCTCCATGGGGACCACCAACGCTTCTCCACCTTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231338.7
ENST00000382065.8
ENST00000508398.1
ENST00000513471.5
CDS TCA 90 bp AGCTGCCTCCAAAGCATGATTCTCAACAGAGCCTCAGAGTCTCCCTaGGAAGACAGCAGAGCTCCAGGAGCGTGGTCTCCTCGGGCAGAT +
Preference number: 5 (lower is better)
Translates to: SCLQSMILNRASESP*EDSRAPGAWSPRAD
Trigger: ATCTGCCCGAGGAGACCACGCTCCTGGAGCTCTGCTGTCTTCTCAGGGAGACTCTGAGGCTCTGTTGAGAATCATGCTTTGGAGGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231338.7
ENST00000382065.8
ENST00000508434.1
CDS GCA 90 bp GGCCTTGGTAGCCTCGAAAGCTGTAGTCTCCATGACAACACTTACTaGAGTCTGGGGGTAGTCCTCCGGTTTGTGGAGACTGGCCCCAGA +
Preference number: 5 (lower is better)
Translates to: GLGSLESCSLHDNTY*SLGVVLRFVETGPR
Trigger: TCTGGGGCCAGTCTCCACAAACCGGAGGACTACCCCCAGACTGCAGTAAGTGTTGTCATGGAGACTACAGCTTTCGAGGCTACCAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS CCA 90 bp GCTCCCCTCGAGGCCCCAGGTCACCTTTGTCGCCCTTCTCACCTTTaGCTCCTTCATGACCAGTGGCTCCATTGTTGCCATTGTTTCCAT +
Preference number: 5 (lower is better)
Translates to: APLEAPGHLCRPSHL*LLHDQWLHCCHCFH
Trigger: ATGGAAACAATGGCAACAATGGAGCCACTGGTCATGAAGGAGCCAAAGGTGAGAAGGGCGACAAAGGTGACCTGGGGCCTCGAGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231338.7
ENST00000382065.8
ENST00000508434.1
CDS CCA 90 bp GGAAAGCCACCAGGAGATGTACCGAGGATGGTTTACCTGAAGTTCTaGTGGAATCCCCGGGTAGCCCTTCTCTCCTTTGGGGCCATGCTG +
Preference number: 5 (lower is better)
Translates to: GKPPGDVPRMVYLKF*WNPRVALLSFGAML
Trigger: CAGCATGGCCCCAAAGGAGAGAAGGGCTACCCGGGGATTCCACCAGAACTTCAGGTAAACCATCCTCGGTACATCTCCTGGTGGCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508434.1
CDS-3UTR CAA 90 bp CTAGTGCCCCTGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCCTAGTGCCCCTGTTCTaGCCCCAGCCCTGTCATATC +
Preference number: 5 (lower is better)
Translates to: LVPLFLPQPCHITTSDSLLVPLF*PQPCHI
Trigger: GATATGACAGGGCTGGGGCAAGAACAGGGGCACTAG...GAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACAGGGGCACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS GCA 90 bp ACTTTCTCCCTCCTGGAGCCGCTACGGCCAGTCTGCTGGTGGCTTTaGACTATTCTTGCCACCACTTTATTAGTTCTTCCGCTCACCTCC +
Preference number: 5 (lower is better)
Translates to: TFSLLEPLRPVCWWL*TILATTLLVLPLTS
Trigger: GGAGGTGAGCGGAAGAACTAATAAAGTGGTGGCAAGAATAGTGCAAAGCCACCAGCAGACTGGCCGTAGCGGCTCCAGGAGGGAGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS GCA 90 bp CTCCGCTCTCTCACTTTCTCCCTCCTGGAGCCGCTACGGCCAGTCTaGTGGTGGCTTTGCACTATTCTTGCCACCACTTTATTAGTTCTT +
Preference number: 5 (lower is better)
Translates to: LRSLTFSLLEPLRPV*WWLCTILATTLLVL
Trigger: AAGAACTAATAAAGTGGTGGCAAGAATAGTGCAAAGCCACCAGCAGACTGGCCGTAGCGGCTCCAGGAGGGAGAAAGTGAGAGAGCGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS GCA 90 bp GGCCTTGGTAGCCTCGAAAGCTGTAGTCTCCATGACAACACTTACTaGAGTCTGGGGGTAGTCCTCCGGTTTGTGGAGACTCCATGTATT +
Preference number: 5 (lower is better)
Translates to: GLGSLESCSLHDNTY*SLGVVLRFVETPCI
Trigger: AATACATGGAGTCTCCACAAACCGGAGGACTACCCCCAGACTGCAGTAAGTGTTGTCATGGAGACTACAGCTTTCGAGGCTACCAAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000508434.1
CDS GCA 90 bp CCTGGAGCCGCTACGGCCAGTCTGCTGGTGGCTTTGCACTATTCTTaGCACCACTTTATTAGTTCTTCCGCTCACCTCCATGTATTCATC +
Preference number: 5 (lower is better)
Translates to: PGAATASLLVALHYS*HHFISSSAHLHVFI
Trigger: GATGAATACATGGAGGTGAGCGGAAGAACTAATAAAGTGGTGGCAAGAATAGTGCAAAGCCACCAGCAGACTGGCCGTAGCGGCTCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS CCA 90 bp GGTCACCTTTGTCGCCCTTCTCACCTTTGGCTCCTTCATGACCAGTaGCTCCATTGTTGCCATTGTTTCCATGGTTTCCTGGAATGCCAG +
Preference number: 5 (lower is better)
Translates to: GHLCRPSHLWLLHDQ*LHCCHCFHGFLECQ
Trigger: CTGGCATTCCAGGAAACCATGGAAACAATGGCAACAATGGAGCCACTGGTCATGAAGGAGCCAAAGGTGAGAAGGGCGACAAAGGTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231338.7
ENST00000382065.8
ENST00000508434.1
CDS CCA 90 bp CATGGAGAGCGCCATTGCCCATTCGCAGCCAAACCTCATCCCCTTTaGCTAGCTTCAGCACAGCATGATTGCTGGATGTATCTGATTTGC +
Preference number: 5 (lower is better)
Translates to: HGERHCPFAAKPHPL*LASAQHDCWMYLIC
Trigger: GCAAATCAGATACATCCAGCAATCATGCTGTGCTGAAGCTAGCCAAAGGGGATGAGGTTTGGCTGCGAATGGGCAATGGCGCTCTCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231338.7
ENST00000382065.8
ENST00000508398.1
ENST00000513471.5
CDS CCA 90 bp TTTAGGTCTGTAGAAGTGTTATTATCCACAGTCCCAGTTTTAGGATaGCTCCGCTCTCTCACTTTCTCCCTCCTGGAGCCGCTACGGCCA +
Preference number: 5 (lower is better)
Translates to: FRSVEVLLSTVPVLG*LRSLTFSLLEPLRP
Trigger: TGGCCGTAGCGGCTCCAGGAGGGAGAAAGTGAGAGAGCGGAGCCATCCTAAAACTGGGACTGTGGATAATAACACTTCTACAGACCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR CAA 90 bp TCCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTAAAAGGTGGAGAAGCGTaGGTGGTCCCCATGGAGAGC +
Preference number: 5 (lower is better)
Translates to: SSDRNKSAQLQVFPKVELKGGEA*VVPMES
Trigger: GCTCTCCATGGGGACCACCAACGCTTCTCCACCTTT...TAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CAA 90 bp CCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTATCTAGTGCCCCTGTTCTaGCCCCAGCCCTGTCATATC +
Preference number: 5 (lower is better)
Translates to: PQIVTNQLSYKSSPKWSYLVPLF*PQPCHI
Trigger: GATATGACAGGGCTGGGGCAAGAACAGGGGCACTAG...ATAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CAA 90 bp CTAGTGCCCCTGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCCTCCATGTATTCATCTaGACACAGGCAAAAAGGGAG +
Preference number: 5 (lower is better)
Translates to: LVPLFLPQPCHITTSDSLLHVFI*TQAKRE
Trigger: CTCCCTTTTTGCCTGTGTCAAGATGAATACATGGAG...GAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACAGGGGCACTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CAA 90 bp TGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATACCATGGAGAGCGCCATaGCCCATTCGCAGCCAAACC +
Preference number: 5 (lower is better)
Translates to: CSCPSPVISLHPILSNVIPWRAP*PIRSQT
Trigger: GGTTTGGCTGCGAATGGGCAATGGCGCTCTCCATGG...TATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CAA 90 bp CTAGTGCCCCTGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAGACTGTGTTGCCATaGTGCATAAGGTACACATAC +
Preference number: 5 (lower is better)
Translates to: LVPLFLPQPCHITTSDSLKTVLP*CIRYTY
Trigger: GTATGTGTACCTTATGCACAATGGCAACACAGTCTT...GAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACAGGGGCACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CAA 90 bp CCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTATCAAACCTCATCCCCTTaGGCTAGCTTCAGCACAGCA +
Preference number: 5 (lower is better)
Translates to: PQIVTNQLSYKSSPKWSYQTSSP*ASFSTA
Trigger: TGCTGTGCTGAAGCTAGCCAAAGGGGATGAGGTTTG...ATAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CAA 90 bp TCCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTACAAACCTCATCCCCTTaGGCTAGCTTCAGCACAGCA +
Preference number: 5 (lower is better)
Translates to: SSDRNKSAQLQVFPKVELQTSSP*ASFSTA
Trigger: TGCTGTGCTGAAGCTAGCCAAAGGGGATGAGGTTTG...TAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS GCA 90 bp GCAGCCAAACCTCATCCCCTTTGGCTAGCTTCAGCACAGCATGATTaGTGGATGTATCTGATTTGCCCTTCATTTCATAGCTGTACATGC +
Preference number: 5 (lower is better)
Translates to: AAKPHPLWLASAQHD*WMYLICPSFHSCTC
Trigger: GCATGTACAGCTATGAAATGAAGGGCAAATCAGATACATCCAGCAATCATGCTGTGCTGAAGCTAGCCAAAGGGGATGAGGTTTGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231338.7
ENST00000382065.8
ENST00000508398.1
ENST00000513471.5
CDS GCA 90 bp AACACTGCTGAAGATAATCCCACTGTTCTGATTGCTGAAGTGGGTTaGCAGAGAAGCCATGAATGCAATCTGAAGTTCTGGTGGAATCCC +
Preference number: 5 (lower is better)
Translates to: NTAEDNPTVLIAEVG*QRSHECNLKFWWNP
Trigger: GGGATTCCACCAGAACTTCAGATTGCATTCATGGCTTCTCTGGCAACCCACTTCAGCAATCAGAACAGTGGGATTATCTTCAGCAGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CAA 90 bp TCTTTTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTCCATGGAGAGCGCCATaGCCCATTCGCAGCCAAACC +
Preference number: 5 (lower is better)
Translates to: SFRCQGKSDKDAEYISQGPWRAP*PIRSQT
Trigger: GGTTTGGCTGCGAATGGGCAATGGCGCTCTCCATGG...ACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS TCA 90 bp GCCACCACTTTATTAGTTCTTCCGCTCACCTCCATGTATTCATCTTaGCACAGGCAAAAAGGGAGGAAAAACAAAGCCAGCAGTTGCCAA +
Preference number: 5 (lower is better)
Translates to: ATTLLVLPLTSMYSS*HRQKGRKNKASSCQ
Trigger: TTGGCAACTGCTGGCTTTGTTTTTCCTCCCTTTTTGCCTGTGTCAAGATGAATACATGGAGGTGAGCGGAAGAACTAATAAAGTGGTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR CAA 90 bp TCCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTACTCCATGTATTCATCTaGACACAGGCAAAAAGGGAG +
Preference number: 5 (lower is better)
Translates to: SSDRNKSAQLQVFPKVELLHVFI*TQAKRE
Trigger: CTCCCTTTTTGCCTGTGTCAAGATGAATACATGGAG...TAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CAA 90 bp TCATATGACCCTGCTGTGTGCCCAAGTCACCTATTCACATGGCTGTTCACATCAAAGAAGTTTCCAATGTaGGTCTCAACACTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: SYDPAVCPSHLFTWLFTSKKFPM*VSTLLK
Trigger: CTTCAGCAGTGTTGAGACCAACATTGGAAACTTCTT...TGATGTGAACAGCCATGTGAATAGGTGACTTGGGCACACAGCAGGGTCATATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CAA 90 bp TCCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTAATGCTGAAGACTGTGTaGCCATTGTGCATAAGGTAC +
Preference number: 5 (lower is better)
Translates to: SSDRNKSAQLQVFPKVELMLKTV*PLCIRY
Trigger: GTACCTTATGCACAATGGCAACACAGTCTTCAGCAT...TAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CAA 90 bp TGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAAAACAAAGCCAGCAGTaGCCAATAGATGAGCTGCCT +
Preference number: 5 (lower is better)
Translates to: CSCPSPVISLHPILSNVIKQSQQ*PIDELP
Trigger: AGGCAGCTCATCTATTGGCAACTGCTGGCTTTGTTT...TATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CAA 90 bp AAATTGTCTCTGGCCATCAGATATTATCTTTTCCACAAGCTTTTCTTATGCTCTAAAGGTGGAGAAGCGTaGGTGGTCCCCATGGAGAGC +
Preference number: 5 (lower is better)
Translates to: KLSLAIRYYLFHKLFLCSKGGEA*VVPMES
Trigger: GCTCTCCATGGGGACCACCAACGCTTCTCCACCTTT...AGAGCATAAGAAAAGCTTGTGGAAAAGATAATATCTGATGGCCAGAGACAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS GCA 90 bp TTGCCATTGTGCATAAGGTACACATACACTTCCTCAACATCCTCATaGTTCATCATGCTGAAGGTGAAGAAATACACACCTGATACTGGG +
Preference number: 5 (lower is better)
Translates to: LPLCIRYTYTSSTSS*FIMLKVKKYTPDTG
Trigger: CCCAGTATCAGGTGTGTATTTCTTCACCTTCAGCATGATGAAGCATGAGGATGTTGAGGAAGTGTATGTGTACCTTATGCACAATGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231338.7
ENST00000382065.8
ENST00000513065.1
ENST00000513471.5
CDS-3UTR CAA 90 bp TGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAAAGAATAAACAAAGCCAGCAGTaGCCAATAGATGAGCTGCCT +
Preference number: 5 (lower is better)
Translates to: CPSPVISLHPILSNVIKNKQSQQ*PIDELP
Trigger: AGGCAGCTCATCTATTGGCAACTGCTGGCTTTGTTT...ATTCTTTATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CAA 90 bp TGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAAAGAATGCTCCATTGTTGCCATaGTTTCCATGGTTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: CPSPVISLHPILSNVIKNAPLLP*FPWFPG
Trigger: TCCAGGAAACCATGGAAACAATGGCAACAATGGAGC...ATTCTTTATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CAA 90 bp TGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAATGCTGAAGACTGTGTaGCCATTGTGCATAAGGTAC +
Preference number: 5 (lower is better)
Translates to: CSCPSPVISLHPILSNVIMLKTV*PLCIRY
Trigger: GTACCTTATGCACAATGGCAACACAGTCTTCAGCAT...TATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CAA 90 bp TCATATGACCCTGCTGTGTGCCCAAGTCACCTATTCACATGGCTGTTCACATCAACATTTGAATATCTATaGGCACTGTACCTCTATGAG +
Preference number: 5 (lower is better)
Translates to: SYDPAVCPSHLFTWLFTSTFEYL*ALYLYE
Trigger: CTCATAGAGGTACAGTGCCAATAGATATTCAAATGT...TGATGTGAACAGCCATGTGAATAGGTGACTTGGGCACACAGCAGGGTCATATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CAA 90 bp TCATATGACCCTGCTGTGTGCCCAAGTCACCTATTCACATGGCTGTTCACATCAACTCAAGTGCTTCGTTaGCAGAGTTGTTTTAAGATT +
Preference number: 5 (lower is better)
Translates to: SYDPAVCPSHLFTWLFTSTQVLR*QSCFKI
Trigger: AATCTTAAAACAACTCTGCAAACGAAGCACTTGAGT...TGATGTGAACAGCCATGTGAATAGGTGACTTGGGCACACAGCAGGGTCATATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS GCA 90 bp AACACTGCTGAAGATAATCCCACTGTTCTGATTGCTGAAGTGGGTTaGCAGAGAAGCCATGAATGCAATCTAAGGAAAGAATTATTGGTC +
Preference number: 5 (lower is better)
Translates to: NTAEDNPTVLIAEVG*QRSHECNLRKELLV
Trigger: GACCAATAATTCTTTCCTTAGATTGCATTCATGGCTTCTCTGGCAACCCACTTCAGCAATCAGAACAGTGGGATTATCTTCAGCAGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513471.5
CDS-3UTR CAA 90 bp TGTTCTTGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAAAGACTGTGTTGCCATaGTGCATAAGGTACACATAC +
Preference number: 5 (lower is better)
Translates to: CSCPSPVISLHPILSNVIKTVLP*CIRYTY
Trigger: GTATGTGTACCTTATGCACAATGGCAACACAGTCTT...TATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCAAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CAA 90 bp TCCTCAGATCGTAACAAATCAGCTCAGCTACAAGTCTTCCCCAAAGTGGAGCTAACATTTGAATATCTATaGGCACTGTACCTCTATGAG +
Preference number: 5 (lower is better)
Translates to: SSDRNKSAQLQVFPKVELTFEYL*ALYLYE
Trigger: CTCATAGAGGTACAGTGCCAATAGATATTCAAATGT...TAGCTCCACTTTGGGGAAGACTTGTAGCTGAGCTGATTTGTTACGATCTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CAA 90 bp AAATTGTCTCTGGCCATCAGATATTATCTTTTCCACAAGCTTTTCTTATGCTCTAGTCTGCTGGTGGCTTaGCACTATTCTTGCCACCAC +
Preference number: 5 (lower is better)
Translates to: KLSLAIRYYLFHKLFLCSSLLVA*HYSCHH
Trigger: GTGGTGGCAAGAATAGTGCAAAGCCACCAGCAGACT...AGAGCATAAGAAAAGCTTGTGGAAAAGATAATATCTGATGGCCAGAGACAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR CAA 90 bp TCTTTTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTCACACCTGGGACTTGTaGCCTACAACCAAACCTTGT +
Preference number: 5 (lower is better)
Translates to: SFRCQGKSDKDAEYISQGHTWDL*PTTKPC
Trigger: ACAAGGTTTGGTTGTAGGCAACAAGTCCCAGGTGTG...ACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS GCA 90 bp GGCCTTAATTTGCAGGAATGTCCCTATATCTACTCCCCTTCCAAGTaGTTTCAATGTGTACACTGTGTATCCCGAATAAGACTTAAAAGT +
Preference number: 5 (lower is better)
Translates to: GLNLQECPYIYSPSK*FQCVHCVSRIRLKS
Trigger: ACTTTTAAGTCTTATTCGGGATACACAGTGTACACATTGAAAGCACTTGGAAGGGGAGTAGATATAGGGACATTCCTGCAAATTAAGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508398.1
CDS-3UTR CAA 90 bp TGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAAAGAATTACCAAAGCAAGAAATaGTCTCTGGCCATCAGATAT +
Preference number: 5 (lower is better)
Translates to: CPSPVISLHPILSNVIKNYQSKK*SLAIRY
Trigger: ATATCTGATGGCCAGAGACAATTTCTTGCTTTGGTA...ATTCTTTATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS GCA 90 bp TTATTGATATTCTTTGTAGTATGGTGTCTCTCCTTGGCCTTAATTTaGAGGAATGTCCCTATATCTACTCCCCTTCCAAGTGCTTTCAAT +
Preference number: 5 (lower is better)
Translates to: LLIFFVVWCLSLALI*RNVPISTPLPSAFN
Trigger: ATTGAAAGCACTTGGAAGGGGAGTAGATATAGGGACATTCCTGCAAATTAAGGCCAAGGAGAGACACCATACTACAAAGAATATCAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508398.1
CDS-3UTR CAA 90 bp TCTTTTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTAAGAAGTTTCCAATGTaGGTCTCAACACTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: SFRCQGKSDKDAEYISQGKKFPM*VSTLLK
Trigger: CTTCAGCAGTGTTGAGACCAACATTGGAAACTTCTT...ACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CAA 90 bp TGCCCCAGCCCTGTCATATCACTACATCCGATTCTCTCAAATGTTATAAAGAATGTCAACATGCAACATTaGAATATCTATTGGCACTGT +
Preference number: 5 (lower is better)
Translates to: CPSPVISLHPILSNVIKNVNMQH*NIYWHC
Trigger: ACAGTGCCAATAGATATTCAAATGTTGCATGTTGAC...ATTCTTTATAACATTTGAGAGAATCGGATGTAGTGATATGACAGGGCTGGGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CAA 90 bp AAATTGTCTCTGGCCATCAGATATTATCTTTTCCACAAGCTTTTCTTATGCTCTGCCTACAACCAAACCTaGTGTGTCACTAAGGTGAAA +
Preference number: 5 (lower is better)
Translates to: KLSLAIRYYLFHKLFLCSAYNQT*CVTKVK
Trigger: TTTCACCTTAGTGACACACAAGGTTTGGTTGTAGGC...AGAGCATAAGAAAAGCTTGTGGAAAAGATAATATCTGATGGCCAGAGACAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS-3UTR CAA 90 bp TTAGGTGCCAAGGAAAGAGTGATAAAGATGCTGAGTATATTAGTCAAGGTCATCGTCAACATGCAACATTaGAATATCTATTGGCACTGT +
Preference number: 5 (lower is better)
Translates to: LGAKERVIKMLSILVKVIVNMQH*NIYWHC
Trigger: ACAGTGCCAATAGATATTCAAATGTTGCATGTTGAC...GATGACCTTGACTAATATACTCAGCATCTTTATCACTCTTTCCTTGGCACCTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231338.7
ENST00000382065.8
CDS-3UTR CAA 90 bp CAAACATACCAAAGCAAGAAATTGTCTCTGGCCATCAGATATTATCTTTTCCACATTCCCTTTAGCCTATaGTCCTCTACTAGGTTGAAA +
Preference number: 5 (lower is better)
Translates to: QTYQSKKLSLAIRYYLFHIPFSL*SSTRLK
Trigger: TTTCAACCTAGTAGAGGACAATAGGCTAAAGGGAAT...GTGGAAAAGATAATATCTGATGGCCAGAGACAATTTCTTGCTTTGGTATGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS TCA 72 bp GTCCTCCGGTTTGTGGAGACTGGCCCCAGAATGTGGTaGTCTGGGCTAGGTCATCTACCTCGGGGTGCGGTA +
Preference number: 6 (lower is better)
Translates to: VLRFVETGPRMW*SGLGHLPRGAV
Trigger: TACCGCACCCCGAGGTAGATGACCTAGCCCAGATCACCACATTCTGGGGCCAGTCTCCACAAACCGGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS CCA 72 bp CCGGTTTGTGGAGACTGGCCCCAGAATGTGGTGATCTaGGCTAGGTCATCTACCTCGGGGTGCGGTAGCTCA +
Preference number: 6 (lower is better)
Translates to: PVCGDWPQNVVI*ARSSTSGCGSS
Trigger: TGAGCTACCGCACCCCGAGGTAGATGACCTAGCCCAGATCACCACATTCTGGGGCCAGTCTCCACAAACCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS CAA 72 bp GTGGAGAAGCGTTGGTGGTCCCCATGGAGAGCGCCATaGCCCATTCGCAGCCAAACCTCATCCCCTTTGGCT +
Preference number: 6 (lower is better)
Translates to: VEKRWWSPWRAP*PIRSQTSSPLA
Trigger: AGCCAAAGGGGATGAGGTTTGGCTGCGAATGGGCAATGGCGCTCTCCATGGGGACCACCAACGCTTCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231338.7
ENST00000382065.8
ENST00000508398.1
ENST00000513471.5
CDS CAA 90 bp CCTGCAAAGGTGGAGAAGCGTTGGTGGTCCCCATGGAGAGCGCCATaGCCCATTCGCAGCCAAACCTCATCCCCTTTGGCTAGCTTCAGC +
Preference number: 6 (lower is better)
Translates to: PAKVEKRWWSPWRAP*PIRSQTSSPLASFS
Trigger: GCTGAAGCTAGCCAAAGGGGATGAGGTTTGGCTGCGAATGGGCAATGGCGCTCTCCATGGGGACCACCAACGCTTCTCCACCTTTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231338.7
ENST00000382065.8
ENST00000508398.1
ENST00000513471.5
CDS GCA 72 bp TGGAGAAGCGTTGGTGGTCCCCATGGAGAGCGCCATTaGCCATTCGCAGCCAAACCTCATCCCCTTTGGCTA +
Preference number: 6 (lower is better)
Translates to: WRSVGGPHGERH*PFAAKPHPLWL
Trigger: TAGCCAAAGGGGATGAGGTTTGGCTGCGAATGGGCAATGGCGCTCTCCATGGGGACCACCAACGCTTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231338.7
ENST00000382065.8
ENST00000508398.1
ENST00000513471.5
CDS CCA 72 bp AATCCTGCAAAGGTGGAGAAGCGTTGGTGGTCCCCATaGAGAGCGCCATTGCCCATTCGCAGCCAAACCTCA +
Preference number: 6 (lower is better)
Translates to: NPAKVEKRWWSP*RAPLPIRSQTS
Trigger: TGAGGTTTGGCTGCGAATGGGCAATGGCGCTCTCCATGGGGACCACCAACGCTTCTCCACCTTTGCAGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231338.7
ENST00000382065.8
ENST00000508398.1
ENST00000513471.5
CDS CCA 72 bp GGAGATGTACCGAGGATGGTTTACCTGAAGTTCTGGTaGAATCCCCGGGTAGCCCTTCTCTCCTTTGGGGCC +
Preference number: 6 (lower is better)
Translates to: GDVPRMVYLKFW*NPRVALLSFGA
Trigger: GGCCCCAAAGGAGAGAAGGGCTACCCGGGGATTCCACCAGAACTTCAGGTAAACCATCCTCGGTACATCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508434.1
CDS CAA 90 bp GGAAGACTTGAGGAAGCGCTCGAACATCCTGATTCCTGGCCCCTTTaGGTCAGGCAGGTTGGAAAGCCACCAGGAGATGTACCGAGGATG +
Preference number: 6 (lower is better)
Translates to: GRLEEALEHPDSWPL*VRQVGKPPGDVPRM
Trigger: CATCCTCGGTACATCTCCTGGTGGCTTTCCAACCTGCCTGACCAAAAGGGGCCAGGAATCAGGATGTTCGAGCGCTTCCTCAAGTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508434.1
ENST00000513065.1
CDS GCA 72 bp CTCACTTTCTCCCTCCTGGAGCCGCTACGGCCAGTCTaGTGGTGGCTTTGCACTATTCTTGCCACCACTTTA +
Preference number: 6 (lower is better)
Translates to: LTFSLLEPLRPV*WWLCTILATTL
Trigger: TAAAGTGGTGGCAAGAATAGTGCAAAGCCACCAGCAGACTGGCCGTAGCGGCTCCAGGAGGGAGAAAGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS CCA 72 bp CCAGGAGATGTACCGAGGATGGTTTACCTGAAGTTCTaGTGGAATCCCCGGGTAGCCCTTCTCTCCTTTGGG +
Preference number: 6 (lower is better)
Translates to: PGDVPRMVYLKF*WNPRVALLSFG
Trigger: CCCAAAGGAGAGAAGGGCTACCCGGGGATTCCACCAGAACTTCAGGTAAACCATCCTCGGTACATCTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508434.1
CDS CAA 72 bp GAGGAAGCGCTCGAACATCCTGATTCCTGGCCCCTTTaGGTCAGGCAGGTTGGAAAGCCACCAGGAGATGTA +
Preference number: 6 (lower is better)
Translates to: EEALEHPDSWPL*VRQVGKPPGDV
Trigger: TACATCTCCTGGTGGCTTTCCAACCTGCCTGACCAAAAGGGGCCAGGAATCAGGATGTTCGAGCGCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508434.1
ENST00000513065.1
CDS TCA 72 bp CAAAGCATGATTCTCAACAGAGCCTCAGAGTCTCCCTaGGAAGACAGCAGAGCTCCAGGAGCGTGGTCTCCT +
Preference number: 6 (lower is better)
Translates to: QSMILNRASESP*EDSRAPGAWSP
Trigger: AGGAGACCACGCTCCTGGAGCTCTGCTGTCTTCTCAGGGAGACTCTGAGGCTCTGTTGAGAATCATGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231338.7
ENST00000382065.8
ENST00000508434.1
CDS GCA 72 bp CTCCTGGAGCCGCTACGGCCAGTCTGCTGGTGGCTTTaGACTATTCTTGCCACCACTTTATTAGTTCTTCCG +
Preference number: 6 (lower is better)
Translates to: LLEPLRPVCWWL*TILATTLLVLP
Trigger: CGGAAGAACTAATAAAGTGGTGGCAAGAATAGTGCAAAGCCACCAGCAGACTGGCCGTAGCGGCTCCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS GCA 72 bp AATGTGGTGATCTGGGCTAGGTCATCTACCTCGGGGTaGGGTAGCTCATCTGGTCTCAGGGATTTTAGGTCT +
Preference number: 6 (lower is better)
Translates to: NVVIWARSSTSG*GSSSGLRDFRS
Trigger: AGACCTAAAATCCCTGAGACCAGATGAGCTACCGCACCCCGAGGTAGATGACCTAGCCCAGATCACCACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS CCA 72 bp CGCCATTGCCCATTCGCAGCCAAACCTCATCCCCTTTaGCTAGCTTCAGCACAGCATGATTGCTGGATGTAT +
Preference number: 6 (lower is better)
Translates to: RHCPFAAKPHPL*LASAQHDCWMY
Trigger: ATACATCCAGCAATCATGCTGTGCTGAAGCTAGCCAAAGGGGATGAGGTTTGGCTGCGAATGGGCAATGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231338.7
ENST00000382065.8
ENST00000508398.1
ENST00000513471.5
CDS CCA 72 bp TTCTCCCTCCTGGAGCCGCTACGGCCAGTCTGCTGGTaGCTTTGCACTATTCTTGCCACCACTTTATTAGTT +
Preference number: 6 (lower is better)
Translates to: FSLLEPLRPVCW*LCTILATTLLV
Trigger: AACTAATAAAGTGGTGGCAAGAATAGTGCAAAGCCACCAGCAGACTGGCCGTAGCGGCTCCAGGAGGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS TCA 72 bp TCACCTTTGTCGCCCTTCTCACCTTTGGCTCCTTCATaGCCAGTGGCTCCATTGTTGCCATTGTTTCCATGG +
Preference number: 6 (lower is better)
Translates to: SPLSPFSPLAPS*PVAPLLPLFPW
Trigger: CCATGGAAACAATGGCAACAATGGAGCCACTGGTCATGAAGGAGCCAAAGGTGAGAAGGGCGACAAAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231338.7
ENST00000382065.8
ENST00000508434.1
CDS CCA 72 bp GTAGAAGTGTTATTATCCACAGTCCCAGTTTTAGGATaGCTCCGCTCTCTCACTTTCTCCCTCCTGGAGCCG +
Preference number: 6 (lower is better)
Translates to: VEVLLSTVPVLG*LRSLTFSLLEP
Trigger: CGGCTCCAGGAGGGAGAAAGTGAGAGAGCGGAGCCATCCTAAAACTGGGACTGTGGATAATAACACTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382065.8
CDS GCA 72 bp GAAGATAATCCCACTGTTCTGATTGCTGAAGTGGGTTaGCAGAGAAGCCATGAATGCAATTCAGGATTGGGG +
Preference number: 6 (lower is better)
Translates to: EDNPTVLIAEVG*QRSHECNSGLG
Trigger: CCCCAATCCTGAATTGCATTCATGGCTTCTCTGGCAACCCACTTCAGCAATCAGAACAGTGGGATTATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513065.1
CDS CAA 90 bp TTCATCTTGACACAGGCAAAAAGGGAGGAAAAACAAAGCCAGCAGTaGCCAATAGATGAGCTGCCTCCAAAGCATGATTCTCAACAGAGC +
Preference number: 6 (lower is better)
Translates to: FILTQAKREEKQSQQ*PIDELPPKHDSQQS
Trigger: GCTCTGTTGAGAATCATGCTTTGGAGGCAGCTCATCTATTGGCAACTGCTGGCTTTGTTTTTCCTCCCTTTTTGCCTGTGTCAAGATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000231338.7
ENST00000382065.8
ENST00000508434.1
CDS TCA 72 bp CAAACCTCATCCCCTTTGGCTAGCTTCAGCACAGCATaGTTGCTGGATGTATCTGATTTGCCCTTCATTTCA +
Preference number: 6 (lower is better)
Translates to: QTSSPLASFSTA*LLDVSDLPFIS
Trigger: TGAAATGAAGGGCAAATCAGATACATCCAGCAATCATGCTGTGCTGAAGCTAGCCAAAGGGGATGAGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000231338.7
ENST00000382065.8
ENST00000508398.1
ENST00000513065.1
ENST00000513471.5
CDS CCA 72 bp CATCCCCTTTGGCTAGCTTCAGCACAGCATGATTGCTaGATGTATCTGATTTGCCCTTCATTTCATAGCTGT +
Preference number: 6 (lower is better)
Translates to: HPLWLASAQHDC*MYLICPSFHSC
Trigger: ACAGCTATGAAATGAAGGGCAAATCAGATACATCCAGCAATCATGCTGTGCTGAAGCTAGCCAAAGGGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000231338.7
ENST00000382065.8
ENST00000508398.1
ENST00000513065.1
ENST00000513471.5
CDS CCA 72 bp CTCTCCTCCCTAAGAATAGTATCTAAGTCCTCCTTTTaGACAGTATGGGCCTTATGCAAACATCCTGTGATG +
Preference number: 6 (lower is better)
Translates to: LSSLRIVSKSSF*TVWALCKHPVM
Trigger: CATCACAGGATGTTTGCATAAGGCCCATACTGTCCAAAAGGAGGACTTAGATACTATTCTTAGGGAGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508434.1
CDS GCA 72 bp TTGCAGGAATGTCCCTATATCTACTCCCCTTCCAAGTaGTTTCAATGTGTACACTGTGTATCCCGAATAAGA +
Preference number: 6 (lower is better)
Translates to: LQECPYIYSPSK*FQCVHCVSRIR
Trigger: TCTTATTCGGGATACACAGTGTACACATTGAAAGCACTTGGAAGGGGAGTAGATATAGGGACATTCCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508398.1
CDS GCA 72 bp TTCTTTGTAGTATGGTGTCTCTCCTTGGCCTTAATTTaGAGGAATGTCCCTATATCTACTCCCCTTCCAAGT +
Preference number: 6 (lower is better)
Translates to: FFVVWCLSLALI*RNVPISTPLPS
Trigger: ACTTGGAAGGGGAGTAGATATAGGGACATTCCTGCAAATTAAGGCCAAGGAGAGACACCATACTACAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508398.1
CDS GCA 72 bp TGCATAAGGTACACATACACTTCCTCAACATCCTCATaGTTCATCATGCTGAAGGTGAAGAAATACACACCT +
Preference number: 6 (lower is better)
Translates to: CIRYTYTSSTSS*FIMLKVKKYTP
Trigger: AGGTGTGTATTTCTTCACCTTCAGCATGATGAAGCATGAGGATGTTGAGGAAGTGTATGTGTACCTTATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000231338.7
ENST00000382065.8
ENST00000508398.1
ENST00000513065.1
ENST00000513471.5
CDS CCA 72 bp TCCATGTTGATATTAACATGTTATACATTGAGGACCTaGAGATACCTGGAGATTTGCCAACTGCCTTCACAT +
Preference number: 6 (lower is better)
Translates to: SMLILTCYTLRT*RYLEICQLPSH
Trigger: ATGTGAAGGCAGTTGGCAAATCTCCAGGTATCTCCAGGTCCTCAATGTATAACATGTTAATATCAACATGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508398.1
CDS CAA 72 bp AATCTACCAGTCATGACATCAAAGAAGTTTCCAATGTaGGTCTCAACACTGCTGAAGATAATCCCACTGTTC +
Preference number: 6 (lower is better)
Translates to: NLPVMTSKKFPM*VSTLLKIIPLF
Trigger: GAACAGTGGGATTATCTTCAGCAGTGTTGAGACCAACATTGGAAACTTCTTTGATGTCATGACTGGTAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231338.7
ENST00000382065.8
ENST00000513065.1
ENST00000513471.5
CDS CAA 90 bp TTTATTGATATTCTTTGTAGTATGGTGTCTCTCCTTGGCCTTAATTaGCAGGAATGTCCCTATATCTACTCCCCTTCCAAGTGCTTTCAA +
Preference number: 6 (lower is better)
Translates to: FIDILCSMVSLLGLN*QECPYIYSPSKCFQ
Trigger: TTGAAAGCACTTGGAAGGGGAGTAGATATAGGGACATTCCTGCAAATTAAGGCCAAGGAGAGACACCATACTACAAAGAATATCAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508398.1
CDS CAA 90 bp TTCACATGTCTTTTATTGATATTCTTTGTAGTATGGTGTCTCTCCTaGGCCTTAATTTGCAGGAATGTCCCTATATCTACTCCCCTTCCA +
Preference number: 6 (lower is better)
Translates to: FTCLLLIFFVVWCLS*ALICRNVPISTPLP
Trigger: TGGAAGGGGAGTAGATATAGGGACATTCCTGCAAATTAAGGCCAAGGAGAGACACCATACTACAAAGAATATCAATAAAAGACATGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508398.1