RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C1QTNF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000145861

Ensembl transcript IDs: ENST00000393975.4, ENST00000652664.2

Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTAAGCCCCCAGATCCCTGCATACTGGCAACACCTGTGCTTGGGGTaGGATTCATTTGCGTGGGATCCATTCCTGCCATCTCAGAGCAGC +
Preference number: 1 (lower is better)
Translates to: LSPQIPAYWQHLCLG*DSFAWDPFLPSQSS
Trigger: GCTGCTCTGAGATGGCAGGAATGGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGGATCTGGGGGCTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR CCA 90 bp CCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTaGGATCCATTCCTGCCATCTCAGAGCAGCGGTTCTCAGATGCAC +
Preference number: 1 (lower is better)
Translates to: PAYWQHLCLGCDSFA*DPFLPSQSSGSQMH
Trigger: GTGCATCTGAGAACCGCTGCTCTGAGATGGCAGGAATGGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR GCA 90 bp AACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGGATCCATTCCTaGCATCTCAGAGCAGCGGTTCTCAGATGCACGTGCATATCCTGG +
Preference number: 1 (lower is better)
Translates to: NTCAWGAIHLRGIHS*HLRAAVLRCTCISW
Trigger: CCAGGATATGCACGTGCATCTGAGAACCGCTGCTCTGAGATGGCAGGAATGGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR GCA 90 bp GATCCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTaGGTGGGATCCATTCCTGCCATCTCAGAGCAGCGGTTCTCAGAT +
Preference number: 1 (lower is better)
Translates to: DPCILATPVLGVRFI*VGSIPAISEQRFSD
Trigger: ATCTGAGAACCGCTGCTCTGAGATGGCAGGAATGGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR GCA 90 bp TGCAGCTTCTTAAGCCCCCAGATCCCTGCATACTGGCAACACCTGTaGTTGGGGTGCGATTCATTTGCGTGGGATCCATTCCTGCCATCT +
Preference number: 1 (lower is better)
Translates to: CSFLSPQIPAYWQHL*LGCDSFAWDPFLPS
Trigger: AGATGGCAGGAATGGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGGATCTGGGGGCTTAAGAAGCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR GCA 90 bp TTGCGTGGGATCCATTCCTGCCATCTCAGAGCAGCGGTTCTCAGATaGACGTGCATATCCTGGTGTATCTCATTCATTGAGAAGCGGGCC +
Preference number: 1 (lower is better)
Translates to: LRGIHSCHLRAAVLR*TCISWCISFIEKRA
Trigger: GGCCCGCTTCTCAATGAATGAGATACACCAGGATATGCACGTGCATCTGAGAACCGCTGCTCTGAGATGGCAGGAATGGATCCCACGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR GCA 90 bp GGGATCCATTCCTGCCATCTCAGAGCAGCGGTTCTCAGATGCACGTaGATATCCTGGTGTATCTCATTCATTGAGAAGCGGGCCTGCAAA +
Preference number: 1 (lower is better)
Translates to: GIHSCHLRAAVLRCT*ISWCISFIEKRACK
Trigger: TTTGCAGGCCCGCTTCTCAATGAATGAGATACACCAGGATATGCACGTGCATCTGAGAACCGCTGCTCTGAGATGGCAGGAATGGATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR GCA 90 bp GTGTCACTTTGTATTCTGATAAGCCTTCGTGAATGGAACGAGCTCTaGCATGGCCTGGGACATTCTGTATTATCTTCCAGCCTCACGCCT +
Preference number: 1 (lower is better)
Translates to: VSLCILISLREWNEL*HGLGHSVLSSSLTP
Trigger: AGGCGTGAGGCTGGAAGATAATACAGAATGTCCCAGGCCATGGCAGAGCTCGTTCCATTCACGAAGGCTTATCAGAATACAAAGTGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR CCA 90 bp ATCCGCCTATCAGTGTCACTTTGTATTCTGATAAGCCTTCGTGAATaGAACGAGCTCTGCCATGGCCTGGGACATTCTGTATTATCTTCC +
Preference number: 1 (lower is better)
Translates to: IRLSVSLCILISLRE*NELCHGLGHSVLSS
Trigger: GGAAGATAATACAGAATGTCCCAGGCCATGGCAGAGCTCGTTCCATTCACGAAGGCTTATCAGAATACAAAGTGACACTGATAGGCGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR CCA 90 bp TTGCGTGGGATCCATTCCTGCCATCTCAGAGCAGCGGTTCTCAGATGCACGTGCAGCTTGTTCCCTGCCTaGAGGACCGCCGTGGCATGT +
Preference number: 2 (lower is better)
Translates to: LRGIHSCHLRAAVLRCTCSLFPA*RTAVAC
Trigger: ACATGCCACGGCGGTCCTCCAGGCAGGGAACAAGCT...GCACGTGCATCTGAGAACCGCTGCTCTGAGATGGCAGGAATGGATCCCACGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR GCA 90 bp CAAGTCTGTGGCCGACTTGACTCATGCAATGAGCAGATTCAAGATGATCCGCCTCAGAAGCTTGTTCCCTaGCTGGAGGACCGCCGTGGC +
Preference number: 2 (lower is better)
Translates to: QVCGRLDSCNEQIQDDPPQKLVP*LEDRRG
Trigger: GCCACGGCGGTCCTCCAGGCAGGGAACAAGCTTCTG...AGGCGGATCATCTTGAATCTGCTCATTGCATGAGTCAAGTCGGCCACAGACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR CCA 90 bp CCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGGATCCTGCAGAGCCTTTTGCTaGAGACCTCTTTTCGAGGCC +
Preference number: 2 (lower is better)
Translates to: PCILATPVLGVRFICVGSCRAFC*RPLFEA
Trigger: GGCCTCGAAAAGAGGTCTCCAGCAAAAGGCTCTGCA...GGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR CCA 90 bp TCCCGCCAGCACCTGGCACTTTTACTGCAGCTTCTTAAGCCCCCAGATCCCTGCGAACGAGCTCTGCCATaGCCTGGGACATTCTGTATT +
Preference number: 2 (lower is better)
Translates to: SRQHLALLLQLLKPPDPCERALP*PGTFCI
Trigger: AATACAGAATGTCCCAGGCCATGGCAGAGCTCGTTC...GCAGGGATCTGGGGGCTTAAGAAGCTGCAGTAAAAGTGCCAGGTGCTGGCGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR CAA 90 bp AGCTTCTTAAGCCCCCAGATCCCTGCATACTGGCAACACCTGTGCTaGGGGTGCGATTCATTTGCGTGGGATCCATTCCTGCCATCTCAG +
Preference number: 2 (lower is better)
Translates to: SFLSPQIPAYWQHLC*GCDSFAWDPFLPSQ
Trigger: CTGAGATGGCAGGAATGGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGGATCTGGGGGCTTAAGAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR GCA 90 bp TTGCGTGGGATCCATTCCTGCCATCTCAGAGCAGCGGTTCTCAGATGCACGTGCACAGTTGTGGGGTCTTaGTCTGTAAGCCCAAGTCCA +
Preference number: 2 (lower is better)
Translates to: LRGIHSCHLRAAVLRCTCTVVGS*SVSPSP
Trigger: TGGACTTGGGCTTACAGAGCAAGACCCCACAACTGT...GCACGTGCATCTGAGAACCGCTGCTCTGAGATGGCAGGAATGGATCCCACGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR CCA 90 bp CAAGTCTGTGGCCGACTTGACTCATGCAATGAGCAGATTCAAGATGATCCGCCTAGCTTGTTCCCTGCCTaGAGGACCGCCGTGGCATGT +
Preference number: 2 (lower is better)
Translates to: QVCGRLDSCNEQIQDDPPSLFPA*RTAVAC
Trigger: ACATGCCACGGCGGTCCTCCAGGCAGGGAACAAGCT...AGGCGGATCATCTTGAATCTGCTCATTGCATGAGTCAAGTCGGCCACAGACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR TCA 90 bp CCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGGATCCTTTGGGGAAGGGAGGTaGGAAGTTGGAAATAGCTTG +
Preference number: 2 (lower is better)
Translates to: PCILATPVLGVRFICVGSFGEGR*EVGNSL
Trigger: CAAGCTATTTCCAACTTCTCACCTCCCTTCCCCAAA...GGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR CCA 90 bp CAGATCCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGGAACGAGCTCTGCCATaGCCTGGGACATTCTGTATT +
Preference number: 2 (lower is better)
Translates to: QIPAYWQHLCLGCDSFAWERALP*PGTFCI
Trigger: AATACAGAATGTCCCAGGCCATGGCAGAGCTCGTTC...CCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGGATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR CCA 90 bp TTGCGTGGGATCCATTCCTGCCATCTCAGAGCAGCGGTTCTCAGATGCACGTGCAGCTCTGCCATGGCCTaGGACATTCTGTATTATCTT +
Preference number: 2 (lower is better)
Translates to: LRGIHSCHLRAAVLRCTCSSAMA*DILYYL
Trigger: AAGATAATACAGAATGTCCCAGGCCATGGCAGAGCT...GCACGTGCATCTGAGAACCGCTGCTCTGAGATGGCAGGAATGGATCCCACGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR CAA 90 bp GCCCCTCCCTCTTTCCTGTCAAGGTCTTTGCACTTGCAGAGCCTTTaGCTGGAGACCTCTTTTCGAGGCCTTTGTGTTGCTCTATTTCCT +
Preference number: 2 (lower is better)
Translates to: APPSFLSRSLHLQSL*LETSFRGLCVALFP
Trigger: AGGAAATAGAGCAACACAAAGGCCTCGAAAAGAGGTCTCCAGCAAAAGGCTCTGCAAGTGCAAAGACCTTGACAGGAAAGAGGGAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR TCA 90 bp CCCCCAGATCCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCAAATTTTCCAGGTACTaGCTTAGAGGGGTCTTAAGA +
Preference number: 2 (lower is better)
Translates to: PPDPCILATPVLGVRFICKFSRY*LRGVLR
Trigger: TCTTAAGACCCCTCTAAGTCAGTACCTGGAAAATTT...GCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGGATCTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR GCA 90 bp CTGTCTCCTGTTATTCCTATTACTGTCAACCATGGCATGTTCATTTCTATCCTGCAGAAGCTTGTTCCCTaGCTGGAGGACCGCCGTGGC +
Preference number: 2 (lower is better)
Translates to: LSPVIPITVNHGMFISILQKLVP*LEDRRG
Trigger: GCCACGGCGGTCCTCCAGGCAGGGAACAAGCTTCTG...CAGGATAGAAATGAACATGCCATGGTTGACAGTAATAGGAATAACAGGAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR GCA 90 bp CAAGTCTGTGGCCGACTTGACTCATGCAATGAGCAGATTCAAGATGATCCGCCTACAGTTGTGGGGTCTTaGTCTGTAAGCCCAAGTCCA +
Preference number: 2 (lower is better)
Translates to: QVCGRLDSCNEQIQDDPPTVVGS*SVSPSP
Trigger: TGGACTTGGGCTTACAGAGCAAGACCCCACAACTGT...AGGCGGATCATCTTGAATCTGCTCATTGCATGAGTCAAGTCGGCCACAGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR GCA 90 bp TTATCTTCCAGCCTCACGCCTCATGCCTCCCTTCTCAGTTCTTACCTTGGCCCCTGTCTTGTCCACTGCTaGATCTTTCAGAGAATAGCA +
Preference number: 2 (lower is better)
Translates to: LSSSLTPHASLLSSYLGPCLVHC*IFQRIA
Trigger: TGCTATTCTCTGAAAGATGCAGCAGTGGACAAGACA...GGGGCCAAGGTAAGAACTGAGAAGGGAGGCATGAGGCGTGAGGCTGGAAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR GCA 90 bp CAAGTCTGTGGCCGACTTGACTCATGCAATGAGCAGATTCAAGATGATCCGCCTCAAGGTCTTTGCACTTaGAGAGCCTTTTGCTGGAGA +
Preference number: 2 (lower is better)
Translates to: QVCGRLDSCNEQIQDDPPQGLCT*RAFCWR
Trigger: TCTCCAGCAAAAGGCTCTGCAAGTGCAAAGACCTTG...AGGCGGATCATCTTGAATCTGCTCATTGCATGAGTCAAGTCGGCCACAGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR CCA 90 bp CAGATCCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGTGTCAACTTAAAATCTaGAGAGTCACTGTATGTAAG +
Preference number: 2 (lower is better)
Translates to: QIPAYWQHLCLGCDSFAWCQLKI*RVTVCK
Trigger: CTTACATACAGTGACTCTCCAGATTTTAAGTTGACA...CCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR CCA 90 bp TTGACTCATGCAATGAGCAGATTCAAGATGATCCGCCTATCAGTGTCACTTTGTTGTCAACTTAAAATCTaGAGAGTCACTGTATGTAAG +
Preference number: 2 (lower is better)
Translates to: LTHAMSRFKMIRLSVSLCCQLKI*RVTVCK
Trigger: CTTACATACAGTGACTCTCCAGATTTTAAGTTGACA...ACAAAGTGACACTGATAGGCGGATCATCTTGAATCTGCTCATTGCATGAGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR CAA 90 bp CCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGGATCCCCCAAGTCCAGAAGCTaGTTCCCTGCCTGGAGGACC +
Preference number: 3 (lower is better)
Translates to: PCILATPVLGVRFICVGSPKSRS*FPAWRT
Trigger: GGTCCTCCAGGCAGGGAACAAGCTTCTGGACTTGGG...GGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR CCA 72 bp GCCCCCAGATCCCTGCATACTGGCAACACCTGTGCTTaGGGTGCGATTCATTTGCGTGGGATCCATTCCTGC +
Preference number: 3 (lower is better)
Translates to: APRSLHTGNTCA*GAIHLRGIHSC
Trigger: GCAGGAATGGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGGATCTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR GCA 72 bp GAGCTACCACATCCCGCCAGCACCTGGCACTTTTACTaGAGCTTCTTAAGCCCCCAGATCCCTGCATACTGG +
Preference number: 3 (lower is better)
Translates to: ELPHPASTWHFY*SFLSPQIPAYW
Trigger: CCAGTATGCAGGGATCTGGGGGCTTAAGAAGCTGCAGTAAAAGTGCCAGGTGCTGGCGGGATGTGGTAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR GCA 72 bp ATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTaGGTGGGATCCATTCCTGCCATCTCAGAGCAGCGG +
Preference number: 3 (lower is better)
Translates to: ILATPVLGVRFI*VGSIPAISEQR
Trigger: CCGCTGCTCTGAGATGGCAGGAATGGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR CCA 72 bp TGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTaGGATCCATTCCTGCCATCTCAGAGCAGCGGTTCT +
Preference number: 3 (lower is better)
Translates to: WQHLCLGCDSFA*DPFLPSQSSGS
Trigger: AGAACCGCTGCTCTGAGATGGCAGGAATGGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR GCA 72 bp CAGATCCCTGCATACTGGCAACACCTGTGCTTGGGGTaGGATTCATTTGCGTGGGATCCATTCCTGCCATCT +
Preference number: 3 (lower is better)
Translates to: QIPAYWQHLCLG*DSFAWDPFLPS
Trigger: AGATGGCAGGAATGGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGGATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR GCA 72 bp TTAAGCCCCCAGATCCCTGCATACTGGCAACACCTGTaGTTGGGGTGCGATTCATTTGCGTGGGATCCATTC +
Preference number: 3 (lower is better)
Translates to: LSPQIPAYWQHL*LGCDSFAWDPF
Trigger: GAATGGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGGATCTGGGGGCTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR CAA 90 bp TCCCGCCAGCACCTGGCACTTTTACTGCAGCTTCTTAAGCCCCCAGATCCCTGCCTCTTTTCGAGGCCTTaGTGTTGCTCTATTTCCTTC +
Preference number: 3 (lower is better)
Translates to: SRQHLALLLQLLKPPDPCLFSRP*CCSISF
Trigger: GAAGGAAATAGAGCAACACAAAGGCCTCGAAAAGAG...GCAGGGATCTGGGGGCTTAAGAAGCTGCAGTAAAAGTGCCAGGTGCTGGCGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR CAA 90 bp TCCCGCCAGCACCTGGCACTTTTACTGCAGCTTCTTAAGCCCCCAGATCCCTGCAAGGGAGGTGAGAAGTaGGAAATAGCTTGTTCTTTG +
Preference number: 3 (lower is better)
Translates to: SRQHLALLLQLLKPPDPCKGGEK*EIACSL
Trigger: CAAAGAACAAGCTATTTCCAACTTCTCACCTCCCTT...GCAGGGATCTGGGGGCTTAAGAAGCTGCAGTAAAAGTGCCAGGTGCTGGCGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR CAA 90 bp CAAGTCTGTGGCCGACTTGACTCATGCAATGAGCAGATTCAAGATGATCCGCCTTACAGTTGTGGGGTCTaGCTCTGTAAGCCCAAGTCC +
Preference number: 3 (lower is better)
Translates to: QVCGRLDSCNEQIQDDPPYSCGV*LCKPKS
Trigger: GGACTTGGGCTTACAGAGCAAGACCCCACAACTGTA...AGGCGGATCATCTTGAATCTGCTCATTGCATGAGTCAAGTCGGCCACAGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR CAA 90 bp CAGATCCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGAAGGGAGGTGAGAAGTaGGAAATAGCTTGTTCTTTG +
Preference number: 3 (lower is better)
Translates to: QIPAYWQHLCLGCDSFAWKGGEK*EIACSL
Trigger: CAAAGAACAAGCTATTTCCAACTTCTCACCTCCCTT...CCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR GCA 72 bp CTTTCCTGTCAAGGTCTTTGCACTTGCAGAGCCTTTTaGTGGAGACCTCTTTTCGAGGCCTTTGTGTTGCTC +
Preference number: 3 (lower is better)
Translates to: LSCQGLCTCRAF*WRPLFEAFVLL
Trigger: GAGCAACACAAAGGCCTCGAAAAGAGGTCTCCAGCAAAAGGCTCTGCAAGTGCAAAGACCTTGACAGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR CAA 90 bp CTGTCTCCTGTTATTCCTATTACTGTCAACCATGGCATGTTCATTTCTATCCTGCCCAAGTCCAGAAGCTaGTTCCCTGCCTGGAGGACC +
Preference number: 3 (lower is better)
Translates to: LSPVIPITVNHGMFISILPKSRS*FPAWRT
Trigger: GGTCCTCCAGGCAGGGAACAAGCTTCTGGACTTGGG...CAGGATAGAAATGAACATGCCATGGTTGACAGTAATAGGAATAACAGGAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR CAA 90 bp CCCCCAGATCCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGAAGTTGGAAATAGCTaGTTCTTTGATCTACATGGA +
Preference number: 3 (lower is better)
Translates to: PPDPCILATPVLGVRFICEVGNS*FFDLHG
Trigger: TCCATGTAGATCAAAGAACAAGCTATTTCCAACTTC...GCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGGATCTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR GCA 72 bp ATCCATTCCTGCCATCTCAGAGCAGCGGTTCTCAGATaGACGTGCATATCCTGGTGTATCTCATTCATTGAG +
Preference number: 3 (lower is better)
Translates to: IHSCHLRAAVLR*TCISWCISFIE
Trigger: CTCAATGAATGAGATACACCAGGATATGCACGTGCATCTGAGAACCGCTGCTCTGAGATGGCAGGAATGGAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR GCA 72 bp TGTATTCTGATAAGCCTTCGTGAATGGAACGAGCTCTaGCATGGCCTGGGACATTCTGTATTATCTTCCAGC +
Preference number: 3 (lower is better)
Translates to: CILISLREWNEL*HGLGHSVLSSS
Trigger: GCTGGAAGATAATACAGAATGTCCCAGGCCATGGCAGAGCTCGTTCCATTCACGAAGGCTTATCAGAATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR CCA 72 bp TCAGTGTCACTTTGTATTCTGATAAGCCTTCGTGAATaGAACGAGCTCTGCCATGGCCTGGGACATTCTGTA +
Preference number: 3 (lower is better)
Translates to: SVSLCILISLRE*NELCHGLGHSV
Trigger: TACAGAATGTCCCAGGCCATGGCAGAGCTCGTTCCATTCACGAAGGCTTATCAGAATACAAAGTGACACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR CAA 90 bp GAGAAGTTGGAAATAGCTTGTTCTTTGATCTACATGGAGGTTTCAGAGTGTGCATACAGTTGTGGGGTCTaGCTCTGTAAGCCCAAGTCC +
Preference number: 3 (lower is better)
Translates to: EKLEIACSLIYMEVSECAYSCGV*LCKPKS
Trigger: GGACTTGGGCTTACAGAGCAAGACCCCACAACTGTA...TGCACACTCTGAAACCTCCATGTAGATCAAAGAACAAGCTATTTCCAACTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR CAA 90 bp GAGAAGCGGGCCTGCAAAAGATTAACTAATAATAAAGCGCTCAAGTCTGTGGCCGCTCTATTTCCTTCTTaGGAACTCAGCTCAAAAATG +
Preference number: 3 (lower is better)
Translates to: EKRACKRLTNNKALKSVAALFPS*ELSSKM
Trigger: CATTTTTGAGCTGAGTTCCAAAGAAGGAAATAGAGC...GGCCACAGACTTGAGCGCTTTATTATTAGTTAATCTTTTGCAGGCCCGCTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR-3UTR CAA 90 bp TCTATTTCCTTCTTTGGAACTCAGCTCAAAAATGGAAATTTTCCAGGTACTGACGTCTTAAGAGAGCTTTaGGGGAAGGGAGGTGAGAAG +
Preference number: 3 (lower is better)
Translates to: SISFFGTQLKNGNFPGTDVLREL*GKGGEK
Trigger: CTTCTCACCTCCCTTCCCCAAAAGCTCTCTTAAGAC...GTCAGTACCTGGAAAATTTCCATTTTTGAGCTGAGTTCCAAAGAAGGAAATAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR GCA 72 bp ATATCCTGGTGTATCTCATTCATTGAGAAGCGGGCCTaGAAAAGATTAACTAATAATAAAGCGCTCAAGTCT +
Preference number: 3 (lower is better)
Translates to: ISWCISFIEKRA*KRLTNNKALKS
Trigger: AGACTTGAGCGCTTTATTATTAGTTAATCTTTTGCAGGCCCGCTTCTCAATGAATGAGATACACCAGGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp TCCCGCCAGCACCTGGCACTTTTACTGCAGCTTCTTAAGCCCCCAGATCCCTGCGGTTACCCTCGCGGCTaGCCGCCACGTCCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: SRQHLALLLQLLKPPDPCGYPRG*PPRPGA
Trigger: CGCCCCTGGACGTGGCGGGCAGCCGCGAGGGTAACC...GCAGGGATCTGGGGGCTTAAGAAGCTGCAGTAAAAGTGCCAGGTGCTGGCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp TCCCGCCAGCACCTGGCACTTTTACTGCAGCTTCTTAAGCCCCCAGATCCCTGCGGGGGCCAGGCAGGCTaGAGACCAGTTGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SRQHLALLLQLLKPPDPCGGQAG*RPVEGS
Trigger: GCTCCCCTCAACTGGTCTGCAGCCTGCCTGGCCCCC...GCAGGGATCTGGGGGCTTAAGAAGCTGCAGTAAAAGTGCCAGGTGCTGGCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp CCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGGATCCCCCAGGGGATCATGGTaGTTACCCTCGCGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PCILATPVLGVRFICVGSPRGSW*LPSRLP
Trigger: GGGCAGCCGCGAGGGTAACCACCATGATCCCCTGGG...GGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GTGCTTGGGGTGCGATTCATTTGCGTGGGATCCATTCCTGCCATCTCAGAGCAGGGGGCCTGGGAGGCCTaGCTCCCCCTTCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: VLGVRFICVGSIPAISEQGAWEA*LPLLAL
Trigger: AAGGGCAAGAAGGGGGAGCCAGGCCTCCCAGGCCCC...CTGCTCTGAGATGGCAGGAATGGATCCCACGCAAATGAATCGCACCCCAAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp CCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGGATCCCAGAAGCTTGTTCCCTaGCTGGAGGACCGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: PCILATPVLGVRFICVGSQKLVP*LEDRRG
Trigger: GCCACGGCGGTCCTCCAGGCAGGGAACAAGCTTCTG...GGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp TTATCTTCCAGCCTCACGCCTCATGCCTCCCTTCTCAGTTCTTACCTTGGCCCCCCCAGGGGATCATGGTaGTTACCCTCGCGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LSSSLTPHASLLSSYLGPPRGSW*LPSRLP
Trigger: GGGCAGCCGCGAGGGTAACCACCATGATCCCCTGGG...GGGGCCAAGGTAAGAACTGAGAAGGGAGGCATGAGGCGTGAGGCTGGAAGATAA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp TTGCGTGGGATCCATTCCTGCCATCTCAGAGCAGCGGTTCTCAGATGCACGTGCGCACCCAGGGGATCATaGTGGTTACCCTCGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LRGIHSCHLRAAVLRCTCAPRGS*WLPSRL
Trigger: CAGCCGCGAGGGTAACCACCATGATCCCCTGGGTGC...GCACGTGCATCTGAGAACCGCTGCTCTGAGATGGCAGGAATGGATCCCACGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp CCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGGATCCGCACCCAGGGGATCATaGTGGTTACCCTCGCGGCTG +
Preference number: 4 (lower is better)
Translates to: PCILATPVLGVRFICVGSAPRGS*WLPSRL
Trigger: CAGCCGCGAGGGTAACCACCATGATCCCCTGGGTGC...GGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp TTATCTTCCAGCCTCACGCCTCATGCCTCCCTTCTCAGTTCTTACCTTGGCCCCGGGCCCCTTCTTGCCTaGTGTGCCATGCTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: LSSSLTPHASLLSSYLGPGPLLA*CAMLPG
Trigger: CCCGGGAAGCATGGCACACCAGGCAAGAAGGGGCCC...GGGGCCAAGGTAAGAACTGAGAAGGGAGGCATGAGGCGTGAGGCTGGAAGATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GGCCTGGGACATTCTGTATTATCTTCCAGCCTCACGCCTCATGCCTCCCTTCTCGGGCAGCCGCTCCCGTaGGTAGCTCTTGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: GLGHSVLSSSLTPHASLLGQPLP*VALGHC
Trigger: GCAGTGACCAAGAGCTACCCACGGGAGCGGCTGCCC...GAGAAGGGAGGCATGAGGCGTGAGGCTGGAAGATAATACAGAATGTCCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GTGCTTGGGGTGCGATTCATTTGCGTGGGATCCATTCCTGCCATCTCAGAGCAGGTCCGGATGCGGTACTaGCCGTTGTGCACCAGGCCG +
Preference number: 4 (lower is better)
Translates to: VLGVRFICVGSIPAISEQVRMRY*PLCTRP
Trigger: CGGCCTGGTGCACAACGGCCAGTACCGCATCCGGAC...CTGCTCTGAGATGGCAGGAATGGATCCCACGCAAATGAATCGCACCCCAAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR TCA 90 bp CCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGGATCCAGGCTGCAGACCAGTTaGGGGGAGCCTTTCCGGAAG +
Preference number: 4 (lower is better)
Translates to: PCILATPVLGVRFICVGSRLQTS*GEPFRK
Trigger: CTTCCGGAAAGGCTCCCCTCAACTGGTCTGCAGCCT...GGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR TCA 90 bp TCCCGCCAGCACCTGGCACTTTTACTGCAGCTTCTTAAGCCCCCAGATCCCTGCTGCCACCGAGAAAGCTaGCTTGGTATGGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: SRQHLALLLQLLKPPDPCCHRES*LGMATA
Trigger: GGCAGTGGCCATACCAAGTCAGCTTTCTCGGTGGCA...GCAGGGATCTGGGGGCTTAAGAAGCTGCAGTAAAAGTGCCAGGTGCTGGCGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR TCA 90 bp CAGATCCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGCAGGATGGTGGAGCCTaGGGCCACATCGTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: QIPAYWQHLCLGCDSFAWQDGGA*GHIVVA
Trigger: GGCAACCACGATGTGGCCTCAGGCTCCACCATCCTG...CCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGGATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp TCCCGCCAGCACCTGGCACTTTTACTGCAGCTTCTTAAGCCCCCAGATCCCTGCCAATGGCCCCGGCTTTaGCCTTTGGTCCTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SRQHLALLLQLLKPPDPCQWPRL*PLVLAF
Trigger: GAAAGCCAGGACCAAAGGGCAAAGCCGGGGCCATTG...GCAGGGATCTGGGGGCTTAAGAAGCTGCAGTAAAAGTGCCAGGTGCTGGCGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GGCCTGGGACATTCTGTATTATCTTCCAGCCTCACGCCTCATGCCTCCCTTCTCCTGGCTCCCCCTTCTTaGCCTTGGGCCCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GLGHSVLSSSLTPHASLLLAPPS*PWAPSC
Trigger: GCAAGAAGGGGCCCAAGGGCAAGAAGGGGGAGCCAG...GAGAAGGGAGGCATGAGGCGTGAGGCTGGAAGATAATACAGAATGTCCCAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp CCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGGATCCAGGCCGATGGCCAGGTaGTTGTTGGCCAGCGTGATG +
Preference number: 4 (lower is better)
Translates to: PCILATPVLGVRFICVGSRPMAR*LLASVM
Trigger: CATCACGCTGGCCAACAAGCACCTGGCCATCGGCCT...GGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp CAGATCCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGCAGAAGCTTGTTCCCTaGCTGGAGGACCGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: QIPAYWQHLCLGCDSFAWQKLVP*LEDRRG
Trigger: GCCACGGCGGTCCTCCAGGCAGGGAACAAGCTTCTG...CCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGGATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp TTGCGTGGGATCCATTCCTGCCATCTCAGAGCAGCGGTTCTCAGATGCACGTGCTGTGCACCAGGCCGATaGCCAGGTGCTTGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LRGIHSCHLRAAVLRCTCCAPGR*PGACWP
Trigger: TGGCCAACAAGCACCTGGCCATCGGCCTGGTGCACA...GCACGTGCATCTGAGAACCGCTGCTCTGAGATGGCAGGAATGGATCCCACGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR TCA 90 bp GGCCTGGGACATTCTGTATTATCTTCCAGCCTCACGCCTCATGCCTCCCTTCTCAGGCTGCAGACCAGTTaGGGGGAGCCTTTCCGGAAG +
Preference number: 4 (lower is better)
Translates to: GLGHSVLSSSLTPHASLLRLQTS*GEPFRK
Trigger: CTTCCGGAAAGGCTCCCCTCAACTGGTCTGCAGCCT...GAGAAGGGAGGCATGAGGCGTGAGGCTGGAAGATAATACAGAATGTCCCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR TCA 90 bp TTATCTTCCAGCCTCACGCCTCATGCCTCCCTTCTCAGTTCTTACCTTGGCCCCCTTCGTCACCCTGCTTaGGAGCCAGGATGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LSSSLTPHASLLSSYLGPLRHPA*EPGWWS
Trigger: GCTCCACCATCCTGGCTCTCAAGCAGGGTGACGAAG...GGGGCCAAGGTAAGAACTGAGAAGGGAGGCATGAGGCGTGAGGCTGGAAGATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GGCCTGGGACATTCTGTATTATCTTCCAGCCTCACGCCTCATGCCTCCCTTCTCTTGCCTGGTGTGCCATaGTTCCCGGGGGTACCGTTG +
Preference number: 4 (lower is better)
Translates to: GLGHSVLSSSLTPHASLLLPGVP*FPGVPL
Trigger: CAACGGTACCCCCGGGAAGCATGGCACACCAGGCAA...GAGAAGGGAGGCATGAGGCGTGAGGCTGGAAGATAATACAGAATGTCCCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp TTATCTTCCAGCCTCACGCCTCATGCCTCCCTTCTCAGTTCTTACCTTGGCCCCCCTTCTTGCCTGGTGTaGCATGCTTCCCGGGGGTAC +
Preference number: 4 (lower is better)
Translates to: LSSSLTPHASLLSSYLGPPSCLV*HASRGY
Trigger: GTACCCCCGGGAAGCATGGCACACCAGGCAAGAAGG...GGGGCCAAGGTAAGAACTGAGAAGGGAGGCATGAGGCGTGAGGCTGGAAGATAA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GTGCTTGGGGTGCGATTCATTTGCGTGGGATCCATTCCTGCCATCTCAGAGCAGCCTTGGGCCCCTTCTTaGCTGGTGTGCCATGCTTCC +
Preference number: 4 (lower is better)
Translates to: VLGVRFICVGSIPAISEQPWAPS*LVCHAS
Trigger: GGAAGCATGGCACACCAGGCAAGAAGGGGCCCAAGG...CTGCTCTGAGATGGCAGGAATGGATCCCACGCAAATGAATCGCACCCCAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp TTATCTTCCAGCCTCACGCCTCATGCCTCCCTTCTCAGTTCTTACCTTGGCCCCAGGCCGATGGCCAGGTaGTTGTTGGCCAGCGTGATG +
Preference number: 4 (lower is better)
Translates to: LSSSLTPHASLLSSYLGPRPMAR*LLASVM
Trigger: CATCACGCTGGCCAACAAGCACCTGGCCATCGGCCT...GGGGCCAAGGTAAGAACTGAGAAGGGAGGCATGAGGCGTGAGGCTGGAAGATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp TCCCGCCAGCACCTGGCACTTTTACTGCAGCTTCTTAAGCCCCCAGATCCCTGCAGCCTCCCCAGTAGCTaGGATTACAGGCACCCAACA +
Preference number: 4 (lower is better)
Translates to: SRQHLALLLQLLKPPDPCSLPSS*DYRHPT
Trigger: TGTTGGGTGCCTGTAATCCCAGCTACTGGGGAGGCT...GCAGGGATCTGGGGGCTTAAGAAGCTGCAGTAAAAGTGCCAGGTGCTGGCGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR TCA 90 bp TTGCGTGGGATCCATTCCTGCCATCTCAGAGCAGCGGTTCTCAGATGCACGTGCGAGCCCGTTCTGCTCTaGGTAGAAGATCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LRGIHSCHLRAAVLRCTCEPVLL*VEDLQP
Trigger: TGGCTGCAGATCTTCTACTCAGAGCAGAACGGGCTC...GCACGTGCATCTGAGAACCGCTGCTCTGAGATGGCAGGAATGGATCCCACGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp CCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGGATCCGGGGTGCGATTCATTTaGGTGGGATCCATTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PCILATPVLGVRFICVGSGVRFI*VGSIPA
Trigger: GGCAGGAATGGATCCCACGCAAATGAATCGCACCCC...GGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp TCCCGCCAGCACCTGGCACTTTTACTGCAGCTTCTTAAGCCCCCAGATCCCTGCCACCTGTGCTTGGGGTaGGATTCATTTGCGTGGGAT +
Preference number: 4 (lower is better)
Translates to: SRQHLALLLQLLKPPDPCHLCLG*DSFAWD
Trigger: ATCCCACGCAAATGAATCGCACCCCAAGCACAGGTG...GCAGGGATCTGGGGGCTTAAGAAGCTGCAGTAAAAGTGCCAGGTGCTGGCGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GTGCTTGGGGTGCGATTCATTTGCGTGGGATCCATTCCTGCCATCTCAGAGCAGTTGCCCAGGCTGGAGTaGAGTGGCAGGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: VLGVRFICVGSIPAISEQLPRLE*SGRISA
Trigger: AGCTGAGATCCTGCCACTGCACTCCAGCCTGGGCAA...CTGCTCTGAGATGGCAGGAATGGATCCCACGCAAATGAATCGCACCCCAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp CCCCCAGATCCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCCCGTCGTGTCCATCTTaGCCGTCTTTGCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: PPDPCILATPVLGVRFICPSCPS*PSLPGK
Trigger: CTTTCCTGGCAAAGACGGCCAAGATGGACACGACGG...GCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGGATCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp TTGCGTGGGATCCATTCCTGCCATCTCAGAGCAGCGGTTCTCAGATGCACGTGCCCGTCGTGTCCATCTTaGCCGTCTTTGCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: LRGIHSCHLRAAVLRCTCPSCPS*PSLPGK
Trigger: CTTTCCTGGCAAAGACGGCCAAGATGGACACGACGG...GCACGTGCATCTGAGAACCGCTGCTCTGAGATGGCAGGAATGGATCCCACGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GTGCTTGGGGTGCGATTCATTTGCGTGGGATCCATTCCTGCCATCTCAGAGCAGCCCGTGGGTAGCTCTTaGTCACTGCCACCGAGAAAG +
Preference number: 4 (lower is better)
Translates to: VLGVRFICVGSIPAISEQPVGSS*SLPPRK
Trigger: CTTTCTCGGTGGCAGTGACCAAGAGCTACCCACGGG...CTGCTCTGAGATGGCAGGAATGGATCCCACGCAAATGAATCGCACCCCAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GGCCTGGGACATTCTGTATTATCTTCCAGCCTCACGCCTCATGCCTCCCTTCTCCGTGGTTGCCGGTGTTaGCATCAAAGGTCCGGATGC +
Preference number: 4 (lower is better)
Translates to: GLGHSVLSSSLTPHASLLRGCRC*HQRSGC
Trigger: GCATCCGGACCTTTGATGCCAACACCGGCAACCACG...GAGAAGGGAGGCATGAGGCGTGAGGCTGGAAGATAATACAGAATGTCCCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp TTGCGTGGGATCCATTCCTGCCATCTCAGAGCAGCGGTTCTCAGATGCACGTGCCATCCCGCCAGCACCTaGCACTTTTACTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LRGIHSCHLRAAVLRCTCHPAST*HFYCSF
Trigger: GAAGCTGCAGTAAAAGTGCCAGGTGCTGGCGGGATG...GCACGTGCATCTGAGAACCGCTGCTCTGAGATGGCAGGAATGGATCCCACGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR CAA 72 bp AGCCCCCAGATCCCTGCATACTGGCAACACCTGTGCTaGGGGTGCGATTCATTTGCGTGGGATCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: SPQIPAYWQHLC*GCDSFAWDPFL
Trigger: CAGGAATGGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGGATCTGGGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp TTGACTCATGCAATGAGCAGATTCAAGATGATCCGCCTATCAGTGTCACTTTGTGGTTACCCTCGCGGCTaGCCGCCACGTCCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: LTHAMSRFKMIRLSVSLCGYPRG*PPRPGA
Trigger: CGCCCCTGGACGTGGCGGGCAGCCGCGAGGGTAACC...ACAAAGTGACACTGATAGGCGGATCATCTTGAATCTGCTCATTGCATGAGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GGCCTGGGACATTCTGTATTATCTTCCAGCCTCACGCCTCATGCCTCCCTTCTCCGCCGCAGACGAACTTaGCGCTGGAAGCATTGTAGT +
Preference number: 4 (lower is better)
Translates to: GLGHSVLSSSLTPHASLLRRRRT*RWKHCS
Trigger: ACTACAATGCTTCCAGCGGCAAGTTCGTCTGCGGCG...GAGAAGGGAGGCATGAGGCGTGAGGCTGGAAGATAATACAGAATGTCCCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp CAGATCCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGCATCAAAGGTCCGGATaGGGTACTGGCCGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: QIPAYWQHLCLGCDSFAWHQRSG*GTGRCA
Trigger: TGCACAACGGCCAGTACCGCATCCGGACCTTTGATG...CCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GGCCTGGGACATTCTGTATTATCTTCCAGCCTCACGCCTCATGCCTCCCTTCTCGGGGTGCGATTCATTTaGGTGGGATCCATTCCTGCC +
Preference number: 4 (lower is better)
Translates to: GLGHSVLSSSLTPHASLLGVRFI*VGSIPA
Trigger: GGCAGGAATGGATCCCACGCAAATGAATCGCACCCC...GAGAAGGGAGGCATGAGGCGTGAGGCTGGAAGATAATACAGAATGTCCCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp CCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGGATCCTTTGCCCTTTGGTCCTaGCTTTCCCCGGTTACCTGT +
Preference number: 4 (lower is better)
Translates to: PCILATPVLGVRFICVGSFALWS*LSPVTC
Trigger: ACAGGTAACCGGGGAAAGCCAGGACCAAAGGGCAAA...GGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GAGAAGCGGGCCTGCAAAAGATTAACTAATAATAAAGCGCTCAAGTCTGTGGCCGGCCAGCCCGCCCAATaGCCCCGGCTTTGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: EKRACKRLTNNKALKSVAGQPAQ*PRLCPL
Trigger: CAAAGGGCAAAGCCGGGGCCATTGGGCGGGCTGGCC...GGCCACAGACTTGAGCGCTTTATTATTAGTTAATCTTTTGCAGGCCCGCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp CCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGGATCCAGACGAACTTGCCGCTaGAAGCATTGTAGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: PCILATPVLGVRFICVGSRRTCR*KHCSGH
Trigger: GTGGCCACTACAATGCTTCCAGCGGCAAGTTCGTCT...GGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR TCA 90 bp GTGCTTGGGGTGCGATTCATTTGCGTGGGATCCATTCCTGCCATCTCAGAGCAGACTCCTGACCTCAAATaGTCCGTCCACCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VLGVRFICVGSIPAISEQTPDLK*SVHLSF
Trigger: GAAGCTGAGGTGGACGGATCATTTGAGGTCAGGAGT...CTGCTCTGAGATGGCAGGAATGGATCCCACGCAAATGAATCGCACCCCAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GGGAAGGGAGGTGAGAAGTTGGAAATAGCTTGTTCTTTGATCTACATGGAGGTTGGGGGCCAGGCAGGCTaGAGACCAGTTGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GKGGEKLEIACSLIYMEVGGQAG*RPVEGS
Trigger: GCTCCCCTCAACTGGTCTGCAGCCTGCCTGGCCCCC...AACCTCCATGTAGATCAAAGAACAAGCTATTTCCAACTTCTCACCTCCCTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp TTATCTTCCAGCCTCACGCCTCATGCCTCCCTTCTCAGTTCTTACCTTGGCCCCCAAACTTCGTCACCCTaGTTGAGAGCCAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: LSSSLTPHASLLSSYLGPQTSSP*LRARMV
Trigger: CACCATCCTGGCTCTCAAGCAGGGTGACGAAGTTTG...GGGGCCAAGGTAAGAACTGAGAAGGGAGGCATGAGGCGTGAGGCTGGAAGATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GGCCTGGGACATTCTGTATTATCTTCCAGCCTCACGCCTCATGCCTCCCTTCTCCAAACTTCGTCACCCTaGTTGAGAGCCAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: GLGHSVLSSSLTPHASLLQTSSP*LRARMV
Trigger: CACCATCCTGGCTCTCAAGCAGGGTGACGAAGTTTG...GAGAAGGGAGGCATGAGGCGTGAGGCTGGAAGATAATACAGAATGTCCCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GTGCTTGGGGTGCGATTCATTTGCGTGGGATCCATTCCTGCCATCTCAGAGCAGCACCTGTGCTTGGGGTaGGATTCATTTGCGTGGGAT +
Preference number: 4 (lower is better)
Translates to: VLGVRFICVGSIPAISEQHLCLG*DSFAWD
Trigger: ATCCCACGCAAATGAATCGCACCCCAAGCACAGGTG...CTGCTCTGAGATGGCAGGAATGGATCCCACGCAAATGAATCGCACCCCAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GGCCTGGGACATTCTGTATTATCTTCCAGCCTCACGCCTCATGCCTCCCTTCTCAAAGCTGACTTGGTATaGCCACTGCCACAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GLGHSVLSSSLTPHASLLKADLV*PLPQLQ
Trigger: CTGCAGCTGTGGCAGTGGCCATACCAAGTCAGCTTT...GAGAAGGGAGGCATGAGGCGTGAGGCTGGAAGATAATACAGAATGTCCCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GTGCTTGGGGTGCGATTCATTTGCGTGGGATCCATTCCTGCCATCTCAGAGCAGAGACGAACTTGCCGCTaGAAGCATTGTAGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: VLGVRFICVGSIPAISEQRRTCR*KHCSGH
Trigger: GTGGCCACTACAATGCTTCCAGCGGCAAGTTCGTCT...CTGCTCTGAGATGGCAGGAATGGATCCCACGCAAATGAATCGCACCCCAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp TTATCTTCCAGCCTCACGCCTCATGCCTCCCTTCTCAGTTCTTACCTTGGCCCCTGCAGAGCCTTTTGCTaGAGACCTCTTTTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: LSSSLTPHASLLSSYLGPCRAFC*RPLFEA
Trigger: GGCCTCGAAAAGAGGTCTCCAGCAAAAGGCTCTGCA...GGGGCCAAGGTAAGAACTGAGAAGGGAGGCATGAGGCGTGAGGCTGGAAGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp CAGATCCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGGGCAACACCTGTGCTTaGGGTGCGATTCATTTGCGT +
Preference number: 4 (lower is better)
Translates to: QIPAYWQHLCLGCDSFAWGNTCA*GAIHLR
Trigger: ACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCC...CCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGGATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp CCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGGATCCCAAGGTCTTTGCACTTaGAGAGCCTTTTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: PCILATPVLGVRFICVGSQGLCT*RAFCWR
Trigger: TCTCCAGCAAAAGGCTCTGCAAGTGCAAAGACCTTG...GGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp CAAGTCTGTGGCCGACTTGACTCATGCAATGAGCAGATTCAAGATGATCCGCCTCCTGAGGCCACATCGTaGTTGCCGGTGTTGGCATCA +
Preference number: 4 (lower is better)
Translates to: QVCGRLDSCNEQIQDDPPPEATS*LPVLAS
Trigger: TGATGCCAACACCGGCAACCACGATGTGGCCTCAGG...AGGCGGATCATCTTGAATCTGCTCATTGCATGAGTCAAGTCGGCCACAGACTTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GGCCTGGGACATTCTGTATTATCTTCCAGCCTCACGCCTCATGCCTCCCTTCTCATGTCTATACCTCGTTaGGGTCATCCTGGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: GLGHSVLSSSLTPHASLLMSIPR*GHPGRH
Trigger: ATGCCGACCAGGATGACCCCAACGAGGTATAGACAT...GAGAAGGGAGGCATGAGGCGTGAGGCTGGAAGATAATACAGAATGTCCCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR TCA 90 bp GGGAAGGGAGGTGAGAAGTTGGAAATAGCTTGTTCTTTGATCTACATGGAGGTTCAGGATGGTGGAGCCTaGGGCCACATCGTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: GKGGEKLEIACSLIYMEVQDGGA*GHIVVA
Trigger: GGCAACCACGATGTGGCCTCAGGCTCCACCATCCTG...AACCTCCATGTAGATCAAAGAACAAGCTATTTCCAACTTCTCACCTCCCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp TTGACTCATGCAATGAGCAGATTCAAGATGATCCGCCTATCAGTGTCACTTTGTCGGTACTGGCCGTTGTaGACCAGGCCGATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LTHAMSRFKMIRLSVSLCRYWPL*TRPMAR
Trigger: CCTGGCCATCGGCCTGGTGCACAACGGCCAGTACCG...ACAAAGTGACACTGATAGGCGGATCATCTTGAATCTGCTCATTGCATGAGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp TCCCGCCAGCACCTGGCACTTTTACTGCAGCTTCTTAAGCCCCCAGATCCCTGCTGTCTTGTCCACTGCTaGATCTTTCAGAGAATAGCA +
Preference number: 4 (lower is better)
Translates to: SRQHLALLLQLLKPPDPCCLVHC*IFQRIA
Trigger: TGCTATTCTCTGAAAGATGCAGCAGTGGACAAGACA...GCAGGGATCTGGGGGCTTAAGAAGCTGCAGTAAAAGTGCCAGGTGCTGGCGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GAGAAGTTGGAAATAGCTTGTTCTTTGATCTACATGGAGGTTTCAGAGTGTGCAGGCCAGCCCGCCCAATaGCCCCGGCTTTGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: EKLEIACSLIYMEVSECAGQPAQ*PRLCPL
Trigger: CAAAGGGCAAAGCCGGGGCCATTGGGCGGGCTGGCC...TGCACACTCTGAAACCTCCATGTAGATCAAAGAACAAGCTATTTCCAACTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GTGCTTGGGGTGCGATTCATTTGCGTGGGATCCATTCCTGCCATCTCAGAGCAGTGCGATTCATTTGCGTaGGATCCATTCCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: VLGVRFICVGSIPAISEQCDSFA*DPFLPS
Trigger: AGATGGCAGGAATGGATCCCACGCAAATGAATCGCA...CTGCTCTGAGATGGCAGGAATGGATCCCACGCAAATGAATCGCACCCCAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR TCA 90 bp GGGAAGGGAGGTGAGAAGTTGGAAATAGCTTGTTCTTTGATCTACATGGAGGTTCTTCGTCACCCTGCTTaGGAGCCAGGATGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: GKGGEKLEIACSLIYMEVLRHPA*EPGWWS
Trigger: GCTCCACCATCCTGGCTCTCAAGCAGGGTGACGAAG...AACCTCCATGTAGATCAAAGAACAAGCTATTTCCAACTTCTCACCTCCCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GGGAAGGGAGGTGAGAAGTTGGAAATAGCTTGTTCTTTGATCTACATGGAGGTTCCTTGGGCCCCTTCTTaGCTGGTGTGCCATGCTTCC +
Preference number: 4 (lower is better)
Translates to: GKGGEKLEIACSLIYMEVPWAPS*LVCHAS
Trigger: GGAAGCATGGCACACCAGGCAAGAAGGGGCCCAAGG...AACCTCCATGTAGATCAAAGAACAAGCTATTTCCAACTTCTCACCTCCCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp CAGATCCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGGTTCTCAGATGCACGTaGATATCCTGGTGTATCTCA +
Preference number: 4 (lower is better)
Translates to: QIPAYWQHLCLGCDSFAWVLRCT*ISWCIS
Trigger: TGAGATACACCAGGATATGCACGTGCATCTGAGAAC...CCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GAGAAGCGGGCCTGCAAAAGATTAACTAATAATAAAGCGCTCAAGTCTGTGGCCTTGCCCAGGCTGGAGTaGAGTGGCAGGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: EKRACKRLTNNKALKSVALPRLE*SGRISA
Trigger: AGCTGAGATCCTGCCACTGCACTCCAGCCTGGGCAA...GGCCACAGACTTGAGCGCTTTATTATTAGTTAATCTTTTGCAGGCCCGCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp CTGTCTCCTGTTATTCCTATTACTGTCAACCATGGCATGTTCATTTCTATCCTGGGGCCCCTTCTTGCCTaGTGTGCCATGCTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: LSPVIPITVNHGMFISILGPLLA*CAMLPG
Trigger: CCCGGGAAGCATGGCACACCAGGCAAGAAGGGGCCC...CAGGATAGAAATGAACATGCCATGGTTGACAGTAATAGGAATAACAGGAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GAGAAGTTGGAAATAGCTTGTTCTTTGATCTACATGGAGGTTTCAGAGTGTGCAGGGCAGCCGCTCCCGTaGGTAGCTCTTGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: EKLEIACSLIYMEVSECAGQPLP*VALGHC
Trigger: GCAGTGACCAAGAGCTACCCACGGGAGCGGCTGCCC...TGCACACTCTGAAACCTCCATGTAGATCAAAGAACAAGCTATTTCCAACTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GAGAAGCGGGCCTGCAAAAGATTAACTAATAATAAAGCGCTCAAGTCTGTGGCCCCTGAGGCCACATCGTaGTTGCCGGTGTTGGCATCA +
Preference number: 4 (lower is better)
Translates to: EKRACKRLTNNKALKSVAPEATS*LPVLAS
Trigger: TGATGCCAACACCGGCAACCACGATGTGGCCTCAGG...GGCCACAGACTTGAGCGCTTTATTATTAGTTAATCTTTTGCAGGCCCGCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GAGAAGCGGGCCTGCAAAAGATTAACTAATAATAAAGCGCTCAAGTCTGTGGCCCCTGGAGGACCGCCGTaGCATGTCTATACCTCGTTG +
Preference number: 4 (lower is better)
Translates to: EKRACKRLTNNKALKSVAPGGPP*HVYTSL
Trigger: CAACGAGGTATAGACATGCCACGGCGGTCCTCCAGG...GGCCACAGACTTGAGCGCTTTATTATTAGTTAATCTTTTGCAGGCCCGCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GTGCTTGGGGTGCGATTCATTTGCGTGGGATCCATTCCTGCCATCTCAGAGCAGAGCTCTGCCATGGCCTaGGACATTCTGTATTATCTT +
Preference number: 4 (lower is better)
Translates to: VLGVRFICVGSIPAISEQSSAMA*DILYYL
Trigger: AAGATAATACAGAATGTCCCAGGCCATGGCAGAGCT...CTGCTCTGAGATGGCAGGAATGGATCCCACGCAAATGAATCGCACCCCAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR TCA 90 bp GGGAAGGGAGGTGAGAAGTTGGAAATAGCTTGTTCTTTGATCTACATGGAGGTTTGCCACCGAGAAAGCTaGCTTGGTATGGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: GKGGEKLEIACSLIYMEVCHRES*LGMATA
Trigger: GGCAGTGGCCATACCAAGTCAGCTTTCTCGGTGGCA...AACCTCCATGTAGATCAAAGAACAAGCTATTTCCAACTTCTCACCTCCCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GAGAAGCGGGCCTGCAAAAGATTAACTAATAATAAAGCGCTCAAGTCTGTGGCCAAGCCCCCAGATCCCTaGATACTGGCAACACCTGTG +
Preference number: 4 (lower is better)
Translates to: EKRACKRLTNNKALKSVAKPPDP*ILATPV
Trigger: CACAGGTGTTGCCAGTATGCAGGGATCTGGGGGCTT...GGCCACAGACTTGAGCGCTTTATTATTAGTTAATCTTTTGCAGGCCCGCTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp CAAGTCTGTGGCCGACTTGACTCATGCAATGAGCAGATTCAAGATGATCCGCCTACCTGGCACTTTTACTaGAGCTTCTTAAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: QVCGRLDSCNEQIQDDPPTWHFY*SFLSPQ
Trigger: CTGGGGGCTTAAGAAGCTGCAGTAAAAGTGCCAGGT...AGGCGGATCATCTTGAATCTGCTCATTGCATGAGTCAAGTCGGCCACAGACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp TTGACTCATGCAATGAGCAGATTCAAGATGATCCGCCTATCAGTGTCACTTTGTAAAGGCGCCAAGCAGTaGGTCAGCAGCACAGGGGAG +
Preference number: 4 (lower is better)
Translates to: LTHAMSRFKMIRLSVSLCKGAKQ*VSSTGE
Trigger: CTCCCCTGTGCTGCTGACCCACTGCTTGGCGCCTTT...ACAAAGTGACACTGATAGGCGGATCATCTTGAATCTGCTCATTGCATGAGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp TCTATTTCCTTCTTTGGAACTCAGCTCAAAAATGGAAATTTTCCAGGTACTGACGGGGCCTGGGAGGCCTaGCTCCCCCTTCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: SISFFGTQLKNGNFPGTDGAWEA*LPLLAL
Trigger: AAGGGCAAGAAGGGGGAGCCAGGCCTCCCAGGCCCC...GTCAGTACCTGGAAAATTTCCATTTTTGAGCTGAGTTCCAAAGAAGGAAATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GGGAAGGGAGGTGAGAAGTTGGAAATAGCTTGTTCTTTGATCTACATGGAGGTTCGTGGTTGCCGGTGTTaGCATCAAAGGTCCGGATGC +
Preference number: 4 (lower is better)
Translates to: GKGGEKLEIACSLIYMEVRGCRC*HQRSGC
Trigger: GCATCCGGACCTTTGATGCCAACACCGGCAACCACG...AACCTCCATGTAGATCAAAGAACAAGCTATTTCCAACTTCTCACCTCCCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp CAAGTCTGTGGCCGACTTGACTCATGCAATGAGCAGATTCAAGATGATCCGCCTATAAGCCTTCGTGAATaGAACGAGCTCTGCCATGGC +
Preference number: 4 (lower is better)
Translates to: QVCGRLDSCNEQIQDDPPISLRE*NELCHG
Trigger: GCCATGGCAGAGCTCGTTCCATTCACGAAGGCTTAT...AGGCGGATCATCTTGAATCTGCTCATTGCATGAGTCAAGTCGGCCACAGACTTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GAGAAGTTGGAAATAGCTTGTTCTTTGATCTACATGGAGGTTTCAGAGTGTGCATTGCCTGGTGTGCCATaGTTCCCGGGGGTACCGTTG +
Preference number: 4 (lower is better)
Translates to: EKLEIACSLIYMEVSECALPGVP*FPGVPL
Trigger: CAACGGTACCCCCGGGAAGCATGGCACACCAGGCAA...TGCACACTCTGAAACCTCCATGTAGATCAAAGAACAAGCTATTTCCAACTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GAGAAGTTGGAAATAGCTTGTTCTTTGATCTACATGGAGGTTTCAGAGTGTGCACCTTCTTGCCTGGTGTaGCATGCTTCCCGGGGGTAC +
Preference number: 4 (lower is better)
Translates to: EKLEIACSLIYMEVSECAPSCLV*HASRGY
Trigger: GTACCCCCGGGAAGCATGGCACACCAGGCAAGAAGG...TGCACACTCTGAAACCTCCATGTAGATCAAAGAACAAGCTATTTCCAACTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GAGAAGTTGGAAATAGCTTGTTCTTTGATCTACATGGAGGTTTCAGAGTGTGCAACTTGGTATGGCCACTaGCACAGCTGCAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: EKLEIACSLIYMEVSECATWYGH*HSCRGL
Trigger: CAGGCCCCTGCAGCTGTGGCAGTGGCCATACCAAGT...TGCACACTCTGAAACCTCCATGTAGATCAAAGAACAAGCTATTTCCAACTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp TGGAGGTTTCAGAGTGTGCACATAAGCAAAAATTATTCACTGAGTTGTCAACTTCGGTACTGGCCGTTGTaGACCAGGCCGATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: WRFQSVHISKNYSLSCQLRYWPL*TRPMAR
Trigger: CCTGGCCATCGGCCTGGTGCACAACGGCCAGTACCG...AAGTTGACAACTCAGTGAATAATTTTTGCTTATGTGCACACTCTGAAACCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GAGAAGCGGGCCTGCAAAAGATTAACTAATAATAAAGCGCTCAAGTCTGTGGCCGAATGGAACGAGCTCTaGCATGGCCTGGGACATTCT +
Preference number: 4 (lower is better)
Translates to: EKRACKRLTNNKALKSVAEWNEL*HGLGHS
Trigger: AGAATGTCCCAGGCCATGGCAGAGCTCGTTCCATTC...GGCCACAGACTTGAGCGCTTTATTATTAGTTAATCTTTTGCAGGCCCGCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GGGAAGGGAGGTGAGAAGTTGGAAATAGCTTGTTCTTTGATCTACATGGAGGTTAAGCCCCCAGATCCCTaGATACTGGCAACACCTGTG +
Preference number: 4 (lower is better)
Translates to: GKGGEKLEIACSLIYMEVKPPDP*ILATPV
Trigger: CACAGGTGTTGCCAGTATGCAGGGATCTGGGGGCTT...AACCTCCATGTAGATCAAAGAACAAGCTATTTCCAACTTCTCACCTCCCTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GGGAAGGGAGGTGAGAAGTTGGAAATAGCTTGTTCTTTGATCTACATGGAGGTTCCGAGAAAGCTGACTTaGTATGGCCACTGCCACAGC +
Preference number: 4 (lower is better)
Translates to: GKGGEKLEIACSLIYMEVPRKLT*YGHCHS
Trigger: GCTGTGGCAGTGGCCATACCAAGTCAGCTTTCTCGG...AACCTCCATGTAGATCAAAGAACAAGCTATTTCCAACTTCTCACCTCCCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GAGAAGTTGGAAATAGCTTGTTCTTTGATCTACATGGAGGTTTCAGAGTGTGCAAGCTTGTTCCCTGCCTaGAGGACCGCCGTGGCATGT +
Preference number: 4 (lower is better)
Translates to: EKLEIACSLIYMEVSECASLFPA*RTAVAC
Trigger: ACATGCCACGGCGGTCCTCCAGGCAGGGAACAAGCT...TGCACACTCTGAAACCTCCATGTAGATCAAAGAACAAGCTATTTCCAACTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GAGAAGCGGGCCTGCAAAAGATTAACTAATAATAAAGCGCTCAAGTCTGTGGCCTGCAGAGCCTTTTGCTaGAGACCTCTTTTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: EKRACKRLTNNKALKSVACRAFC*RPLFEA
Trigger: GGCCTCGAAAAGAGGTCTCCAGCAAAAGGCTCTGCA...GGCCACAGACTTGAGCGCTTTATTATTAGTTAATCTTTTGCAGGCCCGCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR TCA 90 bp TTGACTCATGCAATGAGCAGATTCAAGATGATCCGCCTATCAGTGTCACTTTGTGAGCCCGTTCTGCTCTaGGTAGAAGATCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LTHAMSRFKMIRLSVSLCEPVLL*VEDLQP
Trigger: TGGCTGCAGATCTTCTACTCAGAGCAGAACGGGCTC...ACAAAGTGACACTGATAGGCGGATCATCTTGAATCTGCTCATTGCATGAGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp TGGAGGTTTCAGAGTGTGCACATAAGCAAAAATTATTCACTGAGTTGTCAACTTCTGGCTCCCCCTTCTTaGCCTTGGGCCCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: WRFQSVHISKNYSLSCQLLAPPS*PWAPSC
Trigger: GCAAGAAGGGGCCCAAGGGCAAGAAGGGGGAGCCAG...AAGTTGACAACTCAGTGAATAATTTTTGCTTATGTGCACACTCTGAAACCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp TTGACTCATGCAATGAGCAGATTCAAGATGATCCGCCTATCAGTGTCACTTTGTCGCCGCAGACGAACTTaGCGCTGGAAGCATTGTAGT +
Preference number: 4 (lower is better)
Translates to: LTHAMSRFKMIRLSVSLCRRRRT*RWKHCS
Trigger: ACTACAATGCTTCCAGCGGCAAGTTCGTCTGCGGCG...ACAAAGTGACACTGATAGGCGGATCATCTTGAATCTGCTCATTGCATGAGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GAGAAGCGGGCCTGCAAAAGATTAACTAATAATAAAGCGCTCAAGTCTGTGGCCACAGTTGTGGGGTCTTaGTCTGTAAGCCCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: EKRACKRLTNNKALKSVATVVGS*SVSPSP
Trigger: TGGACTTGGGCTTACAGAGCAAGACCCCACAACTGT...GGCCACAGACTTGAGCGCTTTATTATTAGTTAATCTTTTGCAGGCCCGCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GAGAAGCGGGCCTGCAAAAGATTAACTAATAATAAAGCGCTCAAGTCTGTGGCCACCTGGCACTTTTACTaGAGCTTCTTAAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: EKRACKRLTNNKALKSVATWHFY*SFLSPQ
Trigger: CTGGGGGCTTAAGAAGCTGCAGTAAAAGTGCCAGGT...GGCCACAGACTTGAGCGCTTTATTATTAGTTAATCTTTTGCAGGCCCGCTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GAGAAGCGGGCCTGCAAAAGATTAACTAATAATAAAGCGCTCAAGTCTGTGGCCATAAGCCTTCGTGAATaGAACGAGCTCTGCCATGGC +
Preference number: 4 (lower is better)
Translates to: EKRACKRLTNNKALKSVAISLRE*NELCHG
Trigger: GCCATGGCAGAGCTCGTTCCATTCACGAAGGCTTAT...GGCCACAGACTTGAGCGCTTTATTATTAGTTAATCTTTTGCAGGCCCGCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp TTGACTCATGCAATGAGCAGATTCAAGATGATCCGCCTATCAGTGTCACTTTGTCAGATCCCTGCATACTaGCAACACCTGTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LTHAMSRFKMIRLSVSLCQIPAY*QHLCLG
Trigger: CCCCAAGCACAGGTGTTGCCAGTATGCAGGGATCTG...ACAAAGTGACACTGATAGGCGGATCATCTTGAATCTGCTCATTGCATGAGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp TGGAGGTTTCAGAGTGTGCACATAAGCAAAAATTATTCACTGAGTTGTCAACTTACTTGGTATGGCCACTaGCACAGCTGCAGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: WRFQSVHISKNYSLSCQLTWYGH*HSCRGL
Trigger: CAGGCCCCTGCAGCTGTGGCAGTGGCCATACCAAGT...AAGTTGACAACTCAGTGAATAATTTTTGCTTATGTGCACACTCTGAAACCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GAGAAGTTGGAAATAGCTTGTTCTTTGATCTACATGGAGGTTTCAGAGTGTGCACATCAAAGGTCCGGATaGGGTACTGGCCGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: EKLEIACSLIYMEVSECAHQRSG*GTGRCA
Trigger: TGCACAACGGCCAGTACCGCATCCGGACCTTTGATG...TGCACACTCTGAAACCTCCATGTAGATCAAAGAACAAGCTATTTCCAACTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GAGAAGTTGGAAATAGCTTGTTCTTTGATCTACATGGAGGTTTCAGAGTGTGCAAGGCCACATCGTGGTTaGCGGTGTTGGCATCAAAGG +
Preference number: 4 (lower is better)
Translates to: EKLEIACSLIYMEVSECARPHRG*RCWHQR
Trigger: CCTTTGATGCCAACACCGGCAACCACGATGTGGCCT...TGCACACTCTGAAACCTCCATGTAGATCAAAGAACAAGCTATTTCCAACTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GAGAAGTTGGAAATAGCTTGTTCTTTGATCTACATGGAGGTTTCAGAGTGTGCACGTGGGATCCATTCCTaGCATCTCAGAGCAGCGGTT +
Preference number: 4 (lower is better)
Translates to: EKLEIACSLIYMEVSECARGIHS*HLRAAV
Trigger: AACCGCTGCTCTGAGATGGCAGGAATGGATCCCACG...TGCACACTCTGAAACCTCCATGTAGATCAAAGAACAAGCTATTTCCAACTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp TTGACTCATGCAATGAGCAGATTCAAGATGATCCGCCTATCAGTGTCACTTTGTAGGATCTCAGCTAACTaGAACCTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LTHAMSRFKMIRLSVSLCRISAN*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAGTTAGCTGAGATCCT...ACAAAGTGACACTGATAGGCGGATCATCTTGAATCTGCTCATTGCATGAGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GGGAAGGGAGGTGAGAAGTTGGAAATAGCTTGTTCTTTGATCTACATGGAGGTTATGTCTATACCTCGTTaGGGTCATCCTGGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: GKGGEKLEIACSLIYMEVMSIPR*GHPGRH
Trigger: ATGCCGACCAGGATGACCCCAACGAGGTATAGACAT...AACCTCCATGTAGATCAAAGAACAAGCTATTTCCAACTTCTCACCTCCCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GGCCTGGGACATTCTGTATTATCTTCCAGCCTCACGCCTCATGCCTCCCTTCTCTGTCAACTTAAAATCTaGAGAGTCACTGTATGTAAG +
Preference number: 4 (lower is better)
Translates to: GLGHSVLSSSLTPHASLLCQLKI*RVTVCK
Trigger: CTTACATACAGTGACTCTCCAGATTTTAAGTTGACA...GAGAAGGGAGGCATGAGGCGTGAGGCTGGAAGATAATACAGAATGTCCCAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp CAAGTCTGTGGCCGACTTGACTCATGCAATGAGCAGATTCAAGATGATCCGCCTTGCACGTGCATATCCTaGTGTATCTCATTCATTGAG +
Preference number: 4 (lower is better)
Translates to: QVCGRLDSCNEQIQDDPPCTCIS*CISFIE
Trigger: CTCAATGAATGAGATACACCAGGATATGCACGTGCA...AGGCGGATCATCTTGAATCTGCTCATTGCATGAGTCAAGTCGGCCACAGACTTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp CTGTCTCCTGTTATTCCTATTACTGTCAACCATGGCATGTTCATTTCTATCCTGAGCCTCCCCAGTAGCTaGGATTACAGGCACCCAACA +
Preference number: 4 (lower is better)
Translates to: LSPVIPITVNHGMFISILSLPSS*DYRHPT
Trigger: TGTTGGGTGCCTGTAATCCCAGCTACTGGGGAGGCT...CAGGATAGAAATGAACATGCCATGGTTGACAGTAATAGGAATAACAGGAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR TCA 90 bp CTGTCTCCTGTTATTCCTATTACTGTCAACCATGGCATGTTCATTTCTATCCTGACTCCTGACCTCAAATaGTCCGTCCACCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LSPVIPITVNHGMFISILTPDLK*SVHLSF
Trigger: GAAGCTGAGGTGGACGGATCATTTGAGGTCAGGAGT...CAGGATAGAAATGAACATGCCATGGTTGACAGTAATAGGAATAACAGGAGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GTGCACATAAGCAAAAATTATTCACTGAGTTGTCAACTTAAAATCTGGAGAGTCTGTGCACCAGGCCGATaGCCAGGTGCTTGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: VHISKNYSLSCQLKIWRVCAPGR*PGACWP
Trigger: TGGCCAACAAGCACCTGGCCATCGGCCTGGTGCACA...GACTCTCCAGATTTTAAGTTGACAACTCAGTGAATAATTTTTGCTTATGTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GTGCACATAAGCAAAAATTATTCACTGAGTTGTCAACTTAAAATCTGGAGAGTCAGCTTGTTCCCTGCCTaGAGGACCGCCGTGGCATGT +
Preference number: 4 (lower is better)
Translates to: VHISKNYSLSCQLKIWRVSLFPA*RTAVAC
Trigger: ACATGCCACGGCGGTCCTCCAGGCAGGGAACAAGCT...GACTCTCCAGATTTTAAGTTGACAACTCAGTGAATAATTTTTGCTTATGTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR TCA 90 bp TGGAGGTTTCAGAGTGTGCACATAAGCAAAAATTATTCACTGAGTTGTCAACTTGAATCTTGTCAAACTTaGTGGGCAGCCGCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: WRFQSVHISKNYSLSCQLESCQT*WAAAPV
Trigger: CACGGGAGCGGCTGCCCATCAAGTTTGACAAGATTC...AAGTTGACAACTCAGTGAATAATTTTTGCTTATGTGCACACTCTGAAACCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GTGCACATAAGCAAAAATTATTCACTGAGTTGTCAACTTAAAATCTGGAGAGTCCAATGGCCCCGGCTTTaGCCTTTGGTCCTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: VHISKNYSLSCQLKIWRVQWPRL*PLVLAF
Trigger: GAAAGCCAGGACCAAAGGGCAAAGCCGGGGCCATTG...GACTCTCCAGATTTTAAGTTGACAACTCAGTGAATAATTTTTGCTTATGTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp TCTATTTCCTTCTTTGGAACTCAGCTCAAAAATGGAAATTTTCCAGGTACTGACAGGCCACATCGTGGTTaGCGGTGTTGGCATCAAAGG +
Preference number: 4 (lower is better)
Translates to: SISFFGTQLKNGNFPGTDRPHRG*RCWHQR
Trigger: CCTTTGATGCCAACACCGGCAACCACGATGTGGCCT...GTCAGTACCTGGAAAATTTCCATTTTTGAGCTGAGTTCCAAAGAAGGAAATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GGGAAGGGAGGTGAGAAGTTGGAAATAGCTTGTTCTTTGATCTACATGGAGGTTAGCTCTGCCATGGCCTaGGACATTCTGTATTATCTT +
Preference number: 4 (lower is better)
Translates to: GKGGEKLEIACSLIYMEVSSAMA*DILYYL
Trigger: AAGATAATACAGAATGTCCCAGGCCATGGCAGAGCT...AACCTCCATGTAGATCAAAGAACAAGCTATTTCCAACTTCTCACCTCCCTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GAGAAGCGGGCCTGCAAAAGATTAACTAATAATAAAGCGCTCAAGTCTGTGGCCTGCACGTGCATATCCTaGTGTATCTCATTCATTGAG +
Preference number: 4 (lower is better)
Translates to: EKRACKRLTNNKALKSVACTCIS*CISFIE
Trigger: CTCAATGAATGAGATACACCAGGATATGCACGTGCA...GGCCACAGACTTGAGCGCTTTATTATTAGTTAATCTTTTGCAGGCCCGCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp TCTATTTCCTTCTTTGGAACTCAGCTCAAAAATGGAAATTTTCCAGGTACTGACCAGATCCCTGCATACTaGCAACACCTGTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SISFFGTQLKNGNFPGTDQIPAY*QHLCLG
Trigger: CCCCAAGCACAGGTGTTGCCAGTATGCAGGGATCTG...GTCAGTACCTGGAAAATTTCCATTTTTGAGCTGAGTTCCAAAGAAGGAAATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR CAA 72 bp GGGAAGGGAGGTGAGAAGTTGGAAATAGCTTGTTCTTaGATCTACATGGAGGTTTCAGAGTGTGCACATAAG +
Preference number: 4 (lower is better)
Translates to: GKGGEKLEIACS*IYMEVSECAHK
Trigger: CTTATGTGCACACTCTGAAACCTCCATGTAGATCAAAGAACAAGCTATTTCCAACTTCTCACCTCCCTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR CAA 72 bp GCCTTTTGCTGGAGACCTCTTTTCGAGGCCTTTGTGTaGCTCTATTTCCTTCTTTGGAACTCAGCTCAAAAA +
Preference number: 4 (lower is better)
Translates to: AFCWRPLFEAFV*LYFLLWNSAQK
Trigger: TTTTTGAGCTGAGTTCCAAAGAAGGAAATAGAGCAACACAAAGGCCTCGAAAAGAGGTCTCCAGCAAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp TCTATTTCCTTCTTTGGAACTCAGCTCAAAAATGGAAATTTTCCAGGTACTGACCATCTTGGCCGTCTTTaGCAGGAAAGCCCATTCGTC +
Preference number: 4 (lower is better)
Translates to: SISFFGTQLKNGNFPGTDHLGRL*QESPFV
Trigger: GACGAATGGGCTTTCCTGGCAAAGACGGCCAAGATG...GTCAGTACCTGGAAAATTTCCATTTTTGAGCTGAGTTCCAAAGAAGGAAATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp TCTATTTCCTTCTTTGGAACTCAGCTCAAAAATGGAAATTTTCCAGGTACTGACGAATGGAACGAGCTCTaGCATGGCCTGGGACATTCT +
Preference number: 4 (lower is better)
Translates to: SISFFGTQLKNGNFPGTDEWNEL*HGLGHS
Trigger: AGAATGTCCCAGGCCATGGCAGAGCTCGTTCCATTC...GTCAGTACCTGGAAAATTTCCATTTTTGAGCTGAGTTCCAAAGAAGGAAATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GTGCACATAAGCAAAAATTATTCACTGAGTTGTCAACTTAAAATCTGGAGAGTCCGTGGGATCCATTCCTaGCATCTCAGAGCAGCGGTT +
Preference number: 4 (lower is better)
Translates to: VHISKNYSLSCQLKIWRVRGIHS*HLRAAV
Trigger: AACCGCTGCTCTGAGATGGCAGGAATGGATCCCACG...GACTCTCCAGATTTTAAGTTGACAACTCAGTGAATAATTTTTGCTTATGTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp TCTATTTCCTTCTTTGGAACTCAGCTCAAAAATGGAAATTTTCCAGGTACTGACAGGATCTCAGCTAACTaGAACCTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SISFFGTQLKNGNFPGTDRISAN*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAGTTAGCTGAGATCCT...GTCAGTACCTGGAAAATTTCCATTTTTGAGCTGAGTTCCAAAGAAGGAAATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp TCTATTTCCTTCTTTGGAACTCAGCTCAAAAATGGAAATTTTCCAGGTACTGACTTTGCCCTTTGGTCCTaGCTTTCCCCGGTTACCTGT +
Preference number: 4 (lower is better)
Translates to: SISFFGTQLKNGNFPGTDFALWS*LSPVTC
Trigger: ACAGGTAACCGGGGAAAGCCAGGACCAAAGGGCAAA...GTCAGTACCTGGAAAATTTCCATTTTTGAGCTGAGTTCCAAAGAAGGAAATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp TCTATTTCCTTCTTTGGAACTCAGCTCAAAAATGGAAATTTTCCAGGTACTGACAAAGCTGACTTGGTATaGCCACTGCCACAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SISFFGTQLKNGNFPGTDKADLV*PLPQLQ
Trigger: CTGCAGCTGTGGCAGTGGCCATACCAAGTCAGCTTT...GTCAGTACCTGGAAAATTTCCATTTTTGAGCTGAGTTCCAAAGAAGGAAATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GTGCACATAAGCAAAAATTATTCACTGAGTTGTCAACTTAAAATCTGGAGAGTCCCGAGAAAGCTGACTTaGTATGGCCACTGCCACAGC +
Preference number: 4 (lower is better)
Translates to: VHISKNYSLSCQLKIWRVPRKLT*YGHCHS
Trigger: GCTGTGGCAGTGGCCATACCAAGTCAGCTTTCTCGG...GACTCTCCAGATTTTAAGTTGACAACTCAGTGAATAATTTTTGCTTATGTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp TCTATTTCCTTCTTTGGAACTCAGCTCAAAAATGGAAATTTTCCAGGTACTGACGGCAACACCTGTGCTTaGGGTGCGATTCATTTGCGT +
Preference number: 4 (lower is better)
Translates to: SISFFGTQLKNGNFPGTDGNTCA*GAIHLR
Trigger: ACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCC...GTCAGTACCTGGAAAATTTCCATTTTTGAGCTGAGTTCCAAAGAAGGAAATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp GTGCACATAAGCAAAAATTATTCACTGAGTTGTCAACTTAAAATCTGGAGAGTCCATCCCGCCAGCACCTaGCACTTTTACTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VHISKNYSLSCQLKIWRVHPAST*HFYCSF
Trigger: GAAGCTGCAGTAAAAGTGCCAGGTGCTGGCGGGATG...GACTCTCCAGATTTTAAGTTGACAACTCAGTGAATAATTTTTGCTTATGTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
3UTR CAA 72 bp TTAACTAATAATAAAGCGCTCAAGTCTGTGGCCGACTaGACTCATGCAATGAGCAGATTCAAGATGATCCGC +
Preference number: 4 (lower is better)
Translates to: LTNNKALKSVAD*THAMSRFKMIR
Trigger: GCGGATCATCTTGAATCTGCTCATTGCATGAGTCAAGTCGGCCACAGACTTGAGCGCTTTATTATTAGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GAGAAGTTGGAAATAGCTTGTTCTTTGATCTACATGGAGGTTTCAGAGTGTGCAGGCCGACTTGACTCATaGAATGAGCAGATTCAAGAT +
Preference number: 4 (lower is better)
Translates to: EKLEIACSLIYMEVSECAGRLDS*NEQIQD
Trigger: ATCTTGAATCTGCTCATTGCATGAGTCAAGTCGGCC...TGCACACTCTGAAACCTCCATGTAGATCAAAGAACAAGCTATTTCCAACTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CCA 90 bp TGGAGGTTTCAGAGTGTGCACATAAGCAAAAATTATTCACTGAGTTGTCAACTTGAACGAGCTCTGCCATaGCCTGGGACATTCTGTATT +
Preference number: 4 (lower is better)
Translates to: WRFQSVHISKNYSLSCQLERALP*PGTFCI
Trigger: AATACAGAATGTCCCAGGCCATGGCAGAGCTCGTTC...AAGTTGACAACTCAGTGAATAATTTTTGCTTATGTGCACACTCTGAAACCTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR TCA 90 bp TGGAGGTTTCAGAGTGTGCACATAAGCAAAAATTATTCACTGAGTTGTCAACTTTTTGGGGAAGGGAGGTaGGAAGTTGGAAATAGCTTG +
Preference number: 4 (lower is better)
Translates to: WRFQSVHISKNYSLSCQLFGEGR*EVGNSL
Trigger: CAAGCTATTTCCAACTTCTCACCTCCCTTCCCCAAA...AAGTTGACAACTCAGTGAATAATTTTTGCTTATGTGCACACTCTGAAACCTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR TCA 90 bp TTGACTCATGCAATGAGCAGATTCAAGATGATCCGCCTATCAGTGTCACTTTGTAAATTTTCCAGGTACTaGCTTAGAGGGGTCTTAAGA +
Preference number: 4 (lower is better)
Translates to: LTHAMSRFKMIRLSVSLCKFSRY*LRGVLR
Trigger: TCTTAAGACCCCTCTAAGTCAGTACCTGGAAAATTT...ACAAAGTGACACTGATAGGCGGATCATCTTGAATCTGCTCATTGCATGAGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp GTGCACATAAGCAAAAATTATTCACTGAGTTGTCAACTTAAAATCTGGAGAGTCACAGTTGTGGGGTCTTaGTCTGTAAGCCCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: VHISKNYSLSCQLKIWRVTVVGS*SVSPSP
Trigger: TGGACTTGGGCTTACAGAGCAAGACCCCACAACTGT...GACTCTCCAGATTTTAAGTTGACAACTCAGTGAATAATTTTTGCTTATGTGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp TGGAGGTTTCAGAGTGTGCACATAAGCAAAAATTATTCACTGAGTTGTCAACTTCAAGGTCTTTGCACTTaGAGAGCCTTTTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: WRFQSVHISKNYSLSCQLQGLCT*RAFCWR
Trigger: TCTCCAGCAAAAGGCTCTGCAAGTGCAAAGACCTTG...AAGTTGACAACTCAGTGAATAATTTTTGCTTATGTGCACACTCTGAAACCTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp TCTATTTCCTTCTTTGGAACTCAGCTCAAAAATGGAAATTTTCCAGGTACTGACTACTGGCAACACCTGTaGTTGGGGTGCGATTCATTT +
Preference number: 4 (lower is better)
Translates to: SISFFGTQLKNGNFPGTDYWQHL*LGCDSF
Trigger: AAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTA...GTCAGTACCTGGAAAATTTCCATTTTTGAGCTGAGTTCCAAAGAAGGAAATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR TCA 90 bp GTGCACATAAGCAAAAATTATTCACTGAGTTGTCAACTTAAAATCTGGAGAGTCTTTGGGGAAGGGAGGTaGGAAGTTGGAAATAGCTTG +
Preference number: 4 (lower is better)
Translates to: VHISKNYSLSCQLKIWRVFGEGR*EVGNSL
Trigger: CAAGCTATTTCCAACTTCTCACCTCCCTTCCCCAAA...GACTCTCCAGATTTTAAGTTGACAACTCAGTGAATAATTTTTGCTTATGTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp TGGAGGTTTCAGAGTGTGCACATAAGCAAAAATTATTCACTGAGTTGTCAACTTGGCCGACTTGACTCATaGAATGAGCAGATTCAAGAT +
Preference number: 4 (lower is better)
Translates to: WRFQSVHISKNYSLSCQLGRLDS*NEQIQD
Trigger: ATCTTGAATCTGCTCATTGCATGAGTCAAGTCGGCC...AAGTTGACAACTCAGTGAATAATTTTTGCTTATGTGCACACTCTGAAACCTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR GCA 90 bp TCTATTTCCTTCTTTGGAACTCAGCTCAAAAATGGAAATTTTCCAGGTACTGACGTTCTCAGATGCACGTaGATATCCTGGTGTATCTCA +
Preference number: 4 (lower is better)
Translates to: SISFFGTQLKNGNFPGTDVLRCT*ISWCIS
Trigger: TGAGATACACCAGGATATGCACGTGCATCTGAGAAC...GTCAGTACCTGGAAAATTTCCATTTTTGAGCTGAGTTCCAAAGAAGGAAATAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR TCA 90 bp GTGCACATAAGCAAAAATTATTCACTGAGTTGTCAACTTAAAATCTGGAGAGTCAAATTTTCCAGGTACTaGCTTAGAGGGGTCTTAAGA +
Preference number: 4 (lower is better)
Translates to: VHISKNYSLSCQLKIWRVKFSRY*LRGVLR
Trigger: TCTTAAGACCCCTCTAAGTCAGTACCTGGAAAATTT...GACTCTCCAGATTTTAAGTTGACAACTCAGTGAATAATTTTTGCTTATGTGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS TCA 90 bp CAGCCGCTCCCGTGGGTAGCTCTTGGTCACTGCCACCGAGAAAGCTaGCTTGGTATGGCCACTGCCACAGCTGCAGGGGCCTGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: QPLPWVALGHCHRES*LGMATATAAGAWEA
Trigger: GGCCTCCCAGGCCCCTGCAGCTGTGGCAGTGGCCATACCAAGTCAGCTTTCTCGGTGGCAGTGACCAAGAGCTACCCACGGGAGCGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS GCA 90 bp CAGGCAGGCTGCAGACCAGTTGAGGGGAGCCTTTCCGGAAGTCCCTaGGAGCAAAGGCGCCAAGCAGTGGGTCAGCAGCACAGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: QAGCRPVEGSLSGSP*EQRRQAVGQQHRGG
Trigger: CCCTCCCCTGTGCTGCTGACCCACTGCTTGGCGCCTTTGCTCGCAGGGACTTCCGGAAAGGCTCCCCTCAACTGGTCTGCAGCCTGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS CCA 90 bp GAGCCAGGATGGTGGAGCCTGAGGCCACATCGTGGTTGCCGGTGTTaGCATCAAAGGTCCGGATGCGGTACTGGCCGTTGTGCACCAGGC +
Preference number: 5 (lower is better)
Translates to: EPGWWSLRPHRGCRC*HQRSGCGTGRCAPG
Trigger: GCCTGGTGCACAACGGCCAGTACCGCATCCGGACCTTTGATGCCAACACCGGCAACCACGATGTGGCCTCAGGCTCCACCATCCTGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS GCA 90 bp TTGCCGGTGTTGGCATCAAAGGTCCGGATGCGGTACTGGCCGTTGTaGACCAGGCCGATGGCCAGGTGCTTGTTGGCCAGCGTGATGTCG +
Preference number: 5 (lower is better)
Translates to: LPVLASKVRMRYWPL*TRPMARCLLASVMS
Trigger: CGACATCACGCTGGCCAACAAGCACCTGGCCATCGGCCTGGTGCACAACGGCCAGTACCGCATCCGGACCTTTGATGCCAACACCGGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS GCA 90 bp CTGAGGCCACATCGTGGTTGCCGGTGTTGGCATCAAAGGTCCGGATaGGGTACTGGCCGTTGTGCACCAGGCCGATGGCCAGGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: LRPHRGCRCWHQRSG*GTGRCAPGRWPGAC
Trigger: ACAAGCACCTGGCCATCGGCCTGGTGCACAACGGCCAGTACCGCATCCGGACCTTTGATGCCAACACCGGCAACCACGATGTGGCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS CCA 90 bp ACATCGTGGTTGCCGGTGTTGGCATCAAAGGTCCGGATGCGGTACTaGCCGTTGTGCACCAGGCCGATGGCCAGGTGCTTGTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: TSWLPVLASKVRMRY*PLCTRPMARCLLAS
Trigger: GCTGGCCAACAAGCACCTGGCCATCGGCCTGGTGCACAACGGCCAGTACCGCATCCGGACCTTTGATGCCAACACCGGCAACCACGATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS CCA 90 bp TCACCCTGCTTGAGAGCCAGGATGGTGGAGCCTGAGGCCACATCGTaGTTGCCGGTGTTGGCATCAAAGGTCCGGATGCGGTACTGGCCG +
Preference number: 5 (lower is better)
Translates to: SPCLRARMVEPEATS*LPVLASKVRMRYWP
Trigger: CGGCCAGTACCGCATCCGGACCTTTGATGCCAACACCGGCAACCACGATGTGGCCTCAGGCTCCACCATCCTGGCTCTCAAGCAGGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp CCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGGATCCCCCCGGCTTTGCCCTTaGGTCCTGGCTTTCCCCGGT +
Preference number: 5 (lower is better)
Translates to: PCILATPVLGVRFICVGSPRLCP*VLAFPG
Trigger: ACCGGGGAAAGCCAGGACCAAAGGGCAAAGCCGGGG...GGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp CCCCCAGATCCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCCCCCGGCTTTGCCCTTaGGTCCTGGCTTTCCCCGGT +
Preference number: 5 (lower is better)
Translates to: PPDPCILATPVLGVRFICPRLCP*VLAFPG
Trigger: ACCGGGGAAAGCCAGGACCAAAGGGCAAAGCCGGGG...GCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGGATCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp CCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGGATCCTCCCCCTTCTTGCCCTaGGGCCCCTTCTTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: PCILATPVLGVRFICVGSSPFLP*GPFLPG
Trigger: ACCAGGCAAGAAGGGGCCCAAGGGCAAGAAGGGGGA...GGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS TCA 90 bp CAGCCAAACTTCGTCACCCTGCTTGAGAGCCAGGATGGTGGAGCCTaGGGCCACATCGTGGTTGCCGGTGTTGGCATCAAAGGTCCGGAT +
Preference number: 5 (lower is better)
Translates to: QPNFVTLLESQDGGA*GHIVVAGVGIKGPD
Trigger: ATCCGGACCTTTGATGCCAACACCGGCAACCACGATGTGGCCTCAGGCTCCACCATCCTGGCTCTCAAGCAGGGTGACGAAGTTTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp CCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGGATCCCAGGCTGCAGACCAGTaGAGGGGAGCCTTTCCGGAA +
Preference number: 5 (lower is better)
Translates to: PCILATPVLGVRFICVGSQAADQ*RGAFPE
Trigger: TTCCGGAAAGGCTCCCCTCAACTGGTCTGCAGCCTG...GGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS TCA 90 bp TCTGCTCTGAGTAGAAGATCTGCAGCCAAACTTCGTCACCCTGCTTaGGAGCCAGGATGGTGGAGCCTGAGGCCACATCGTGGTTGCCGG +
Preference number: 5 (lower is better)
Translates to: SALSRRSAAKLRHPA*EPGWWSLRPHRGCR
Trigger: CCGGCAACCACGATGTGGCCTCAGGCTCCACCATCCTGGCTCTCAAGCAGGGTGACGAAGTTTGGCTGCAGATCTTCTACTCAGAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp CCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGGATCCGCCGTCGTGTCCATCTaGGCCGTCTTTGCCAGGAAA +
Preference number: 5 (lower is better)
Translates to: PCILATPVLGVRFICVGSAVVSI*AVFARK
Trigger: TTTCCTGGCAAAGACGGCCAAGATGGACACGACGGC...GGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp GGCCTGGGACATTCTGTATTATCTTCCAGCCTCACGCCTCATGCCTCCCTTCTCCCCAAGTCCAGAAGCTaGTTCCCTGCCTGGAGGACC +
Preference number: 5 (lower is better)
Translates to: GLGHSVLSSSLTPHASLLPKSRS*FPAWRT
Trigger: GGTCCTCCAGGCAGGGAACAAGCTTCTGGACTTGGG...GAGAAGGGAGGCATGAGGCGTGAGGCTGGAAGATAATACAGAATGTCCCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp GTGCTTGGGGTGCGATTCATTTGCGTGGGATCCATTCCTGCCATCTCAGAGCAGTCGTGGTTGCCGGTGTaGGCATCAAAGGTCCGGATG +
Preference number: 5 (lower is better)
Translates to: VLGVRFICVGSIPAISEQSWLPV*ASKVRM
Trigger: CATCCGGACCTTTGATGCCAACACCGGCAACCACGA...CTGCTCTGAGATGGCAGGAATGGATCCCACGCAAATGAATCGCACCCCAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp CCCCCAGATCCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCTGGGGTGCGATTCATTaGCGTGGGATCCATTCCTGC +
Preference number: 5 (lower is better)
Translates to: PPDPCILATPVLGVRFICWGAIH*RGIHSC
Trigger: GCAGGAATGGATCCCACGCAAATGAATCGCACCCCA...GCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGGATCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp CCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGGATCCTGGCAACACCTGTGCTaGGGGTGCGATTCATTTGCG +
Preference number: 5 (lower is better)
Translates to: PCILATPVLGVRFICVGSWQHLC*GCDSFA
Trigger: CGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCA...GGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS TCA 90 bp AAGCATTGTAGTGGCCACCCTCGTTCATCAGAATCTTGTCAAACTTaGTGGGCAGCCGCTCCCGTGGGTAGCTCTTGGTCACTGCCACCG +
Preference number: 5 (lower is better)
Translates to: KHCSGHPRSSESCQT*WAAAPVGSSWSLPP
Trigger: CGGTGGCAGTGACCAAGAGCTACCCACGGGAGCGGCTGCCCATCAAGTTTGACAAGATTCTGATGAACGAGGGTGGCCACTACAATGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp CCCCCAGATCCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCAGAATCTTGTCAAACTaGATGGGCAGCCGCTCCCGT +
Preference number: 5 (lower is better)
Translates to: PPDPCILATPVLGVRFICRILSN*MGSRSR
Trigger: ACGGGAGCGGCTGCCCATCAAGTTTGACAAGATTCT...GCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGGATCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp GGCCTGGGACATTCTGTATTATCTTCCAGCCTCACGCCTCATGCCTCCCTTCTCTGGCAACACCTGTGCTaGGGGTGCGATTCATTTGCG +
Preference number: 5 (lower is better)
Translates to: GLGHSVLSSSLTPHASLLWQHLC*GCDSFA
Trigger: CGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCA...GAGAAGGGAGGCATGAGGCGTGAGGCTGGAAGATAATACAGAATGTCCCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp CAAGTCTGTGGCCGACTTGACTCATGCAATGAGCAGATTCAAGATGATCCGCCTCCAATGGCCCCGGCTTaGCCCTTTGGTCCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: QVCGRLDSCNEQIQDDPPPMAPA*PFGPGF
Trigger: AAAGCCAGGACCAAAGGGCAAAGCCGGGGCCATTGG...AGGCGGATCATCTTGAATCTGCTCATTGCATGAGTCAAGTCGGCCACAGACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp GAGAAGCGGGCCTGCAAAAGATTAACTAATAATAAAGCGCTCAAGTCTGTGGCCATGCGGTACTGGCCGTaGTGCACCAGGCCGATGGCC +
Preference number: 5 (lower is better)
Translates to: EKRACKRLTNNKALKSVAMRYWP*CTRPMA
Trigger: GGCCATCGGCCTGGTGCACAACGGCCAGTACCGCAT...GGCCACAGACTTGAGCGCTTTATTATTAGTTAATCTTTTGCAGGCCCGCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp TTATCTTCCAGCCTCACGCCTCATGCCTCCCTTCTCAGTTCTTACCTTGGCCCCTACAGTTGTGGGGTCTaGCTCTGTAAGCCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: LSSSLTPHASLLSSYLGPYSCGV*LCKPKS
Trigger: GGACTTGGGCTTACAGAGCAAGACCCCACAACTGTA...GGGGCCAAGGTAAGAACTGAGAAGGGAGGCATGAGGCGTGAGGCTGGAAGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp CCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGGATCCGTCTTAAGAGAGCTTTaGGGGAAGGGAGGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: PCILATPVLGVRFICVGSVLREL*GKGGEK
Trigger: CTTCTCACCTCCCTTCCCCAAAAGCTCTCTTAAGAC...GGATCCCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS TCA 90 bp GAGGCTGTCTGTCCAGTAAGGGTCATAGAAGAGCCCGTTCTGCTCTaGGTAGAAGATCTGCAGCCAAACTTCGTCACCCTGCTTGAGAGC +
Preference number: 5 (lower is better)
Translates to: EAVCPVRVIEEPVLL*VEDLQPNFVTLLES
Trigger: GCTCTCAAGCAGGGTGACGAAGTTTGGCTGCAGATCTTCTACTCAGAGCAGAACGGGCTCTTCTATGACCCTTACTGGACAGACAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp GAGAAGCGGGCCTGCAAAAGATTAACTAATAATAAAGCGCTCAAGTCTGTGGCCCCCTTGGGCCCCTTCTaGCCTGGTGTGCCATGCTTC +
Preference number: 5 (lower is better)
Translates to: EKRACKRLTNNKALKSVAPLGPF*PGVPCF
Trigger: GAAGCATGGCACACCAGGCAAGAAGGGGCCCAAGGG...GGCCACAGACTTGAGCGCTTTATTATTAGTTAATCTTTTGCAGGCCCGCTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp TCCCGCCAGCACCTGGCACTTTTACTGCAGCTTCTTAAGCCCCCAGATCCCTGCTCGTTCATCAGAATCTaGTCAAACTTGATGGGCAGC +
Preference number: 5 (lower is better)
Translates to: SRQHLALLLQLLKPPDPCSFIRI*SNLMGS
Trigger: GCTGCCCATCAAGTTTGACAAGATTCTGATGAACGA...GCAGGGATCTGGGGGCTTAAGAAGCTGCAGTAAAAGTGCCAGGTGCTGGCGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp GGCCTGGGACATTCTGTATTATCTTCCAGCCTCACGCCTCATGCCTCCCTTCTCGTCTTAAGAGAGCTTTaGGGGAAGGGAGGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: GLGHSVLSSSLTPHASLLVLREL*GKGGEK
Trigger: CTTCTCACCTCCCTTCCCCAAAAGCTCTCTTAAGAC...GAGAAGGGAGGCATGAGGCGTGAGGCTGGAAGATAATACAGAATGTCCCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp TTGACTCATGCAATGAGCAGATTCAAGATGATCCGCCTATCAGTGTCACTTTGTCCTGGCTCCCCCTTCTaGCCCTTGGGCCCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: LTHAMSRFKMIRLSVSLCPGSPF*PLGPFL
Trigger: CAAGAAGGGGCCCAAGGGCAAGAAGGGGGAGCCAGG...ACAAAGTGACACTGATAGGCGGATCATCTTGAATCTGCTCATTGCATGAGTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp TCCCGCCAGCACCTGGCACTTTTACTGCAGCTTCTTAAGCCCCCAGATCCCTGCCCTATCAGTGTCACTTaGTATTCTGATAAGCCTTCG +
Preference number: 5 (lower is better)
Translates to: SRQHLALLLQLLKPPDPCPISVT*YSDKPS
Trigger: CGAAGGCTTATCAGAATACAAAGTGACACTGATAGG...GCAGGGATCTGGGGGCTTAAGAAGCTGCAGTAAAAGTGCCAGGTGCTGGCGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp CCCCCAGATCCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCTTTTTAGACGATGTTTaGCCATGTTGGTCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: PPDPCILATPVLGVRFICFLDDV*PCWSGW
Trigger: CCAGCCTGACCAACATGGCAAAACATCGTCTAAAAA...GCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGGATCTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp CTGTCTCCTGTTATTCCTATTACTGTCAACCATGGCATGTTCATTTCTATCCTGCCTGGCTCCCCCTTCTaGCCCTTGGGCCCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: LSPVIPITVNHGMFISILPGSPF*PLGPFL
Trigger: CAAGAAGGGGCCCAAGGGCAAGAAGGGGGAGCCAGG...CAGGATAGAAATGAACATGCCATGGTTGACAGTAATAGGAATAACAGGAGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp CTGTCTCCTGTTATTCCTATTACTGTCAACCATGGCATGTTCATTTCTATCCTGATGCGGTACTGGCCGTaGTGCACCAGGCCGATGGCC +
Preference number: 5 (lower is better)
Translates to: LSPVIPITVNHGMFISILMRYWP*CTRPMA
Trigger: GGCCATCGGCCTGGTGCACAACGGCCAGTACCGCAT...CAGGATAGAAATGAACATGCCATGGTTGACAGTAATAGGAATAACAGGAGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp TCCCGCCAGCACCTGGCACTTTTACTGCAGCTTCTTAAGCCCCCAGATCCCTGCGCTCTATTTCCTTCTTaGGAACTCAGCTCAAAAATG +
Preference number: 5 (lower is better)
Translates to: SRQHLALLLQLLKPPDPCALFPS*ELSSKM
Trigger: CATTTTTGAGCTGAGTTCCAAAGAAGGAAATAGAGC...GCAGGGATCTGGGGGCTTAAGAAGCTGCAGTAAAAGTGCCAGGTGCTGGCGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp GGCCTGGGACATTCTGTATTATCTTCCAGCCTCACGCCTCATGCCTCCCTTCTCCTCTTTTCGAGGCCTTaGTGTTGCTCTATTTCCTTC +
Preference number: 5 (lower is better)
Translates to: GLGHSVLSSSLTPHASLLLFSRP*CCSISF
Trigger: GAAGGAAATAGAGCAACACAAAGGCCTCGAAAAGAG...GAGAAGGGAGGCATGAGGCGTGAGGCTGGAAGATAATACAGAATGTCCCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp TTGCGTGGGATCCATTCCTGCCATCTCAGAGCAGCGGTTCTCAGATGCACGTGCCCTATCAGTGTCACTTaGTATTCTGATAAGCCTTCG +
Preference number: 5 (lower is better)
Translates to: LRGIHSCHLRAAVLRCTCPISVT*YSDKPS
Trigger: CGAAGGCTTATCAGAATACAAAGTGACACTGATAGG...GCACGTGCATCTGAGAACCGCTGCTCTGAGATGGCAGGAATGGATCCCACGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp CTGTCTCCTGTTATTCCTATTACTGTCAACCATGGCATGTTCATTTCTATCCTGCCCTTGGGCCCCTTCTaGCCTGGTGTGCCATGCTTC +
Preference number: 5 (lower is better)
Translates to: LSPVIPITVNHGMFISILPLGPF*PGVPCF
Trigger: GAAGCATGGCACACCAGGCAAGAAGGGGCCCAAGGG...CAGGATAGAAATGAACATGCCATGGTTGACAGTAATAGGAATAACAGGAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp CTGTCTCCTGTTATTCCTATTACTGTCAACCATGGCATGTTCATTTCTATCCTGCCGATGGCCAGGTGCTaGTTGGCCAGCGTGATGTCG +
Preference number: 5 (lower is better)
Translates to: LSPVIPITVNHGMFISILPMARC*LASVMS
Trigger: CGACATCACGCTGGCCAACAAGCACCTGGCCATCGG...CAGGATAGAAATGAACATGCCATGGTTGACAGTAATAGGAATAACAGGAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp TCCCGCCAGCACCTGGCACTTTTACTGCAGCTTCTTAAGCCCCCAGATCCCTGCGAAGTTGGAAATAGCTaGTTCTTTGATCTACATGGA +
Preference number: 5 (lower is better)
Translates to: SRQHLALLLQLLKPPDPCEVGNS*FFDLHG
Trigger: TCCATGTAGATCAAAGAACAAGCTATTTCCAACTTC...GCAGGGATCTGGGGGCTTAAGAAGCTGCAGTAAAAGTGCCAGGTGCTGGCGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp GAGAAGCGGGCCTGCAAAAGATTAACTAATAATAAAGCGCTCAAGTCTGTGGCCAGAATCTTGTCAAACTaGATGGGCAGCCGCTCCCGT +
Preference number: 5 (lower is better)
Translates to: EKRACKRLTNNKALKSVARILSN*MGSRSR
Trigger: ACGGGAGCGGCTGCCCATCAAGTTTGACAAGATTCT...GGCCACAGACTTGAGCGCTTTATTATTAGTTAATCTTTTGCAGGCCCGCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp GGGAAGGGAGGTGAGAAGTTGGAAATAGCTTGTTCTTTGATCTACATGGAGGTTCATGTCTATACCTCGTaGGGGTCATCCTGGTCGGCA +
Preference number: 5 (lower is better)
Translates to: GKGGEKLEIACSLIYMEVHVYTS*GSSWSA
Trigger: TGCCGACCAGGATGACCCCAACGAGGTATAGACATG...AACCTCCATGTAGATCAAAGAACAAGCTATTTCCAACTTCTCACCTCCCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp GGCCTGGGACATTCTGTATTATCTTCCAGCCTCACGCCTCATGCCTCCCTTCTCGCTCTATTTCCTTCTTaGGAACTCAGCTCAAAAATG +
Preference number: 5 (lower is better)
Translates to: GLGHSVLSSSLTPHASLLALFPS*ELSSKM
Trigger: CATTTTTGAGCTGAGTTCCAAAGAAGGAAATAGAGC...GAGAAGGGAGGCATGAGGCGTGAGGCTGGAAGATAATACAGAATGTCCCAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp GGGAAGGGAGGTGAGAAGTTGGAAATAGCTTGTTCTTTGATCTACATGGAGGTTTGGGGTGCGATTCATTaGCGTGGGATCCATTCCTGC +
Preference number: 5 (lower is better)
Translates to: GKGGEKLEIACSLIYMEVWGAIH*RGIHSC
Trigger: GCAGGAATGGATCCCACGCAAATGAATCGCACCCCA...AACCTCCATGTAGATCAAAGAACAAGCTATTTCCAACTTCTCACCTCCCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp TGGAGGTTTCAGAGTGTGCACATAAGCAAAAATTATTCACTGAGTTGTCAACTTCCGATGGCCAGGTGCTaGTTGGCCAGCGTGATGTCG +
Preference number: 5 (lower is better)
Translates to: WRFQSVHISKNYSLSCQLPMARC*LASVMS
Trigger: CGACATCACGCTGGCCAACAAGCACCTGGCCATCGG...AAGTTGACAACTCAGTGAATAATTTTTGCTTATGTGCACACTCTGAAACCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp CAGATCCCTGCATACTGGCAACACCTGTGCTTGGGGTGCGATTCATTTGCGTGGGAAGTTGGAAATAGCTaGTTCTTTGATCTACATGGA +
Preference number: 5 (lower is better)
Translates to: QIPAYWQHLCLGCDSFAWEVGNS*FFDLHG
Trigger: TCCATGTAGATCAAAGAACAAGCTATTTCCAACTTC...CCACGCAAATGAATCGCACCCCAAGCACAGGTGTTGCCAGTATGCAGGGATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp CAAGTCTGTGGCCGACTTGACTCATGCAATGAGCAGATTCAAGATGATCCGCCTTTTTTAGACGATGTTTaGCCATGTTGGTCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: QVCGRLDSCNEQIQDDPPFLDDV*PCWSGW
Trigger: CCAGCCTGACCAACATGGCAAAACATCGTCTAAAAA...AGGCGGATCATCTTGAATCTGCTCATTGCATGAGTCAAGTCGGCCACAGACTTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp TGGAGGTTTCAGAGTGTGCACATAAGCAAAAATTATTCACTGAGTTGTCAACTTCAGGCTGCAGACCAGTaGAGGGGAGCCTTTCCGGAA +
Preference number: 5 (lower is better)
Translates to: WRFQSVHISKNYSLSCQLQAADQ*RGAFPE
Trigger: TTCCGGAAAGGCTCCCCTCAACTGGTCTGCAGCCTG...AAGTTGACAACTCAGTGAATAATTTTTGCTTATGTGCACACTCTGAAACCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp CTGTCTCCTGTTATTCCTATTACTGTCAACCATGGCATGTTCATTTCTATCCTGCCATCTTGGCCGTCTTaGCCAGGAAAGCCCATTCGT +
Preference number: 5 (lower is better)
Translates to: LSPVIPITVNHGMFISILPSWPS*PGKPIR
Trigger: ACGAATGGGCTTTCCTGGCAAAGACGGCCAAGATGG...CAGGATAGAAATGAACATGCCATGGTTGACAGTAATAGGAATAACAGGAGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp TGGAGGTTTCAGAGTGTGCACATAAGCAAAAATTATTCACTGAGTTGTCAACTTGAGGCCACATCGTGGTaGCCGGTGTTGGCATCAAAG +
Preference number: 5 (lower is better)
Translates to: WRFQSVHISKNYSLSCQLEATSW*PVLASK
Trigger: CTTTGATGCCAACACCGGCAACCACGATGTGGCCTC...AAGTTGACAACTCAGTGAATAATTTTTGCTTATGTGCACACTCTGAAACCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp TCTATTTCCTTCTTTGGAACTCAGCTCAAAAATGGAAATTTTCCAGGTACTGACACCGAGAAAGCTGACTaGGTATGGCCACTGCCACAG +
Preference number: 5 (lower is better)
Translates to: SISFFGTQLKNGNFPGTDTEKAD*VWPLPQ
Trigger: CTGTGGCAGTGGCCATACCAAGTCAGCTTTCTCGGT...GTCAGTACCTGGAAAATTTCCATTTTTGAGCTGAGTTCCAAAGAAGGAAATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp TGGAGGTTTCAGAGTGTGCACATAAGCAAAAATTATTCACTGAGTTGTCAACTTACCGAGAAAGCTGACTaGGTATGGCCACTGCCACAG +
Preference number: 5 (lower is better)
Translates to: WRFQSVHISKNYSLSCQLTEKAD*VWPLPQ
Trigger: CTGTGGCAGTGGCCATACCAAGTCAGCTTTCTCGGT...AAGTTGACAACTCAGTGAATAATTTTTGCTTATGTGCACACTCTGAAACCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp GGGAAGGGAGGTGAGAAGTTGGAAATAGCTTGTTCTTTGATCTACATGGAGGTTCTCTTTTCGAGGCCTTaGTGTTGCTCTATTTCCTTC +
Preference number: 5 (lower is better)
Translates to: GKGGEKLEIACSLIYMEVLFSRP*CCSISF
Trigger: GAAGGAAATAGAGCAACACAAAGGCCTCGAAAAGAG...AACCTCCATGTAGATCAAAGAACAAGCTATTTCCAACTTCTCACCTCCCTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp GTGCACATAAGCAAAAATTATTCACTGAGTTGTCAACTTAAAATCTGGAGAGTCCCATCTTGGCCGTCTTaGCCAGGAAAGCCCATTCGT +
Preference number: 5 (lower is better)
Translates to: VHISKNYSLSCQLKIWRVPSWPS*PGKPIR
Trigger: ACGAATGGGCTTTCCTGGCAAAGACGGCCAAGATGG...GACTCTCCAGATTTTAAGTTGACAACTCAGTGAATAATTTTTGCTTATGTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp TTGACTCATGCAATGAGCAGATTCAAGATGATCCGCCTATCAGTGTCACTTTGTTCGTTCATCAGAATCTaGTCAAACTTGATGGGCAGC +
Preference number: 5 (lower is better)
Translates to: LTHAMSRFKMIRLSVSLCSFIRI*SNLMGS
Trigger: GCTGCCCATCAAGTTTGACAAGATTCTGATGAACGA...ACAAAGTGACACTGATAGGCGGATCATCTTGAATCTGCTCATTGCATGAGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS-3UTR CAA 90 bp GTGCACATAAGCAAAAATTATTCACTGAGTTGTCAACTTAAAATCTGGAGAGTCCATGTCTATACCTCGTaGGGGTCATCCTGGTCGGCA +
Preference number: 5 (lower is better)
Translates to: VHISKNYSLSCQLKIWRVHVYTS*GSSWSA
Trigger: TGCCGACCAGGATGACCCCAACGAGGTATAGACATG...GACTCTCCAGATTTTAAGTTGACAACTCAGTGAATAATTTTTGCTTATGTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS CCA 72 bp AGCCCGCCCAATGGCCCCGGCTTTGCCCTTTGGTCCTaGCTTTCCCCGGTTACCTGTCCGGCCAGGTGGACC +
Preference number: 6 (lower is better)
Translates to: SPPNGPGFALWS*LSPVTCPARWT
Trigger: GGTCCACCTGGCCGGACAGGTAACCGGGGAAAGCCAGGACCAAAGGGCAAAGCCGGGGCCATTGGGCGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS CAA 90 bp TGGTTGCCGGTGTTGGCATCAAAGGTCCGGATGCGGTACTGGCCGTaGTGCACCAGGCCGATGGCCAGGTGCTTGTTGGCCAGCGTGATG +
Preference number: 6 (lower is better)
Translates to: WLPVLASKVRMRYWP*CTRPMARCLLASVM
Trigger: CATCACGCTGGCCAACAAGCACCTGGCCATCGGCCTGGTGCACAACGGCCAGTACCGCATCCGGACCTTTGATGCCAACACCGGCAACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS CAA 90 bp AGAGCCAGGATGGTGGAGCCTGAGGCCACATCGTGGTTGCCGGTGTaGGCATCAAAGGTCCGGATGCGGTACTGGCCGTTGTGCACCAGG +
Preference number: 6 (lower is better)
Translates to: RARMVEPEATSWLPV*ASKVRMRYWPLCTR
Trigger: CCTGGTGCACAACGGCCAGTACCGCATCCGGACCTTTGATGCCAACACCGGCAACCACGATGTGGCCTCAGGCTCCACCATCCTGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS CAA 90 bp CCCTGCTTGAGAGCCAGGATGGTGGAGCCTGAGGCCACATCGTGGTaGCCGGTGTTGGCATCAAAGGTCCGGATGCGGTACTGGCCGTTG +
Preference number: 6 (lower is better)
Translates to: PCLRARMVEPEATSW*PVLASKVRMRYWPL
Trigger: CAACGGCCAGTACCGCATCCGGACCTTTGATGCCAACACCGGCAACCACGATGTGGCCTCAGGCTCCACCATCCTGGCTCTCAAGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS TCA 72 bp CCGTGGGTAGCTCTTGGTCACTGCCACCGAGAAAGCTaGCTTGGTATGGCCACTGCCACAGCTGCAGGGGCC +
Preference number: 6 (lower is better)
Translates to: PWVALGHCHRES*LGMATATAAGA
Trigger: GGCCCCTGCAGCTGTGGCAGTGGCCATACCAAGTCAGCTTTCTCGGTGGCAGTGACCAAGAGCTACCCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS GCA 72 bp TTGGCATCAAAGGTCCGGATGCGGTACTGGCCGTTGTaGACCAGGCCGATGGCCAGGTGCTTGTTGGCCAGC +
Preference number: 6 (lower is better)
Translates to: LASKVRMRYWPL*TRPMARCLLAS
Trigger: GCTGGCCAACAAGCACCTGGCCATCGGCCTGGTGCACAACGGCCAGTACCGCATCCGGACCTTTGATGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS GCA 72 bp CATCGTGGTTGCCGGTGTTGGCATCAAAGGTCCGGATaGGGTACTGGCCGTTGTGCACCAGGCCGATGGCCA +
Preference number: 6 (lower is better)
Translates to: HRGCRCWHQRSG*GTGRCAPGRWP
Trigger: TGGCCATCGGCCTGGTGCACAACGGCCAGTACCGCATCCGGACCTTTGATGCCAACACCGGCAACCACGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS CCA 72 bp TTGCCGGTGTTGGCATCAAAGGTCCGGATGCGGTACTaGCCGTTGTGCACCAGGCCGATGGCCAGGTGCTTG +
Preference number: 6 (lower is better)
Translates to: LPVLASKVRMRY*PLCTRPMARCL
Trigger: CAAGCACCTGGCCATCGGCCTGGTGCACAACGGCCAGTACCGCATCCGGACCTTTGATGCCAACACCGGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS CCA 72 bp TGGTGGAGCCTGAGGCCACATCGTGGTTGCCGGTGTTaGCATCAAAGGTCCGGATGCGGTACTGGCCGTTGT +
Preference number: 6 (lower is better)
Translates to: WWSLRPHRGCRC*HQRSGCGTGRC
Trigger: ACAACGGCCAGTACCGCATCCGGACCTTTGATGCCAACACCGGCAACCACGATGTGGCCTCAGGCTCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS CCA 72 bp TTGAGAGCCAGGATGGTGGAGCCTGAGGCCACATCGTaGTTGCCGGTGTTGGCATCAAAGGTCCGGATGCGG +
Preference number: 6 (lower is better)
Translates to: LRARMVEPEATS*LPVLASKVRMR
Trigger: CCGCATCCGGACCTTTGATGCCAACACCGGCAACCACGATGTGGCCTCAGGCTCCACCATCCTGGCTCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS CAA 72 bp ATGGTGGAGCCTGAGGCCACATCGTGGTTGCCGGTGTaGGCATCAAAGGTCCGGATGCGGTACTGGCCGTTG +
Preference number: 6 (lower is better)
Translates to: MVEPEATSWLPV*ASKVRMRYWPL
Trigger: CAACGGCCAGTACCGCATCCGGACCTTTGATGCCAACACCGGCAACCACGATGTGGCCTCAGGCTCCACCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS CAA 72 bp AGAGCCAGGATGGTGGAGCCTGAGGCCACATCGTGGTaGCCGGTGTTGGCATCAAAGGTCCGGATGCGGTAC +
Preference number: 6 (lower is better)
Translates to: RARMVEPEATSW*PVLASKVRMRY
Trigger: GTACCGCATCCGGACCTTTGATGCCAACACCGGCAACCACGATGTGGCCTCAGGCTCCACCATCCTGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS CCA 72 bp TGCCTGGAGGACCGCCGTGGCATGTCTATACCTCGTTaGGGTCATCCTGGTCGGCATAGATTAGGAAGCCCG +
Preference number: 6 (lower is better)
Translates to: CLEDRRGMSIPR*GHPGRHRLGSP
Trigger: CGGGCTTCCTAATCTATGCCGACCAGGATGACCCCAACGAGGTATAGACATGCCACGGCGGTCCTCCAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS CCA 72 bp AGTCCAGAAGCTTGTTCCCTGCCTGGAGGACCGCCGTaGCATGTCTATACCTCGTTGGGGTCATCCTGGTCG +
Preference number: 6 (lower is better)
Translates to: SPEACSLPGGPP*HVYTSLGSSWS
Trigger: CGACCAGGATGACCCCAACGAGGTATAGACATGCCACGGCGGTCCTCCAGGCAGGGAACAAGCTTCTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS TCA 72 bp TTCGTCACCCTGCTTGAGAGCCAGGATGGTGGAGCCTaGGGCCACATCGTGGTTGCCGGTGTTGGCATCAAA +
Preference number: 6 (lower is better)
Translates to: FVTLLESQDGGA*GHIVVAGVGIK
Trigger: TTTGATGCCAACACCGGCAACCACGATGTGGCCTCAGGCTCCACCATCCTGGCTCTCAAGCAGGGTGACGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS CAA 90 bp GCCTACAGTTGTGGGGTCTTGCTCTGTAAGCCCAAGTCCAGAAGCTaGTTCCCTGCCTGGAGGACCGCCGTGGCATGTCTATACCTCGTT +
Preference number: 6 (lower is better)
Translates to: AYSCGVLLCKPKSRS*FPAWRTAVACLYLV
Trigger: AACGAGGTATAGACATGCCACGGCGGTCCTCCAGGCAGGGAACAAGCTTCTGGACTTGGGCTTACAGAGCAAGACCCCACAACTGTAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS TCA 72 bp AGTGGCCACCCTCGTTCATCAGAATCTTGTCAAACTTaGTGGGCAGCCGCTCCCGTGGGTAGCTCTTGGTCA +
Preference number: 6 (lower is better)
Translates to: SGHPRSSESCQT*WAAAPVGSSWS
Trigger: TGACCAAGAGCTACCCACGGGAGCGGCTGCCCATCAAGTTTGACAAGATTCTGATGAACGAGGGTGGCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2
CDS TCA 72 bp TGTCCAGTAAGGGTCATAGAAGAGCCCGTTCTGCTCTaGGTAGAAGATCTGCAGCCAAACTTCGTCACCCTG +
Preference number: 6 (lower is better)
Translates to: CPVRVIEEPVLL*VEDLQPNFVTL
Trigger: CAGGGTGACGAAGTTTGGCTGCAGATCTTCTACTCAGAGCAGAACGGGCTCTTCTATGACCCTTACTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393975.4
ENST00000652664.2