RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C1QTNF12 (Homo sapiens)

Ensembl gene IDs: ENSG00000184163

Ensembl transcript IDs: ENST00000330388.2, ENST00000462849.1, ENST00000468365.1, ENST00000478606.1, ENST00000486627.1

Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp CGGGCATCAGTAGGAGGGTCCCCGGGATCCGGCGGCAGCTCCTCGCCAGCCCCCCGGGTCCAGAAGCCCTaGGAACCGGCGCTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: RASVGGSPGSGGSSSPAPRVQKP*EPALRG
Trigger: GCCACGGAGCGCCGGTTCTCAGGGCTTCTGGACCCG...GGGGGCTGGCGAGGAGCTGCCGCCGGATCCCGGGGACCCTCCTACTGATGCCCG
74% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR TCA 90 bp ACCACGGGCATCAGTAGGAGGGTCCCCGGGATCCGGCGGCAGCTCCTCGCCAGCCGGACACGGGGGCCGTaGACCGACCCGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TTGISRRVPGIRRQLLASRTRGP*TDPRPG
Trigger: GCCTGGCCTCGGGTCGGTTCACGGCCCCCGTGTCCG...GCTGGCGAGGAGCTGCCGCCGGATCCCGGGGACCCTCCTACTGATGCCCGTGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR GCA 90 bp ACGGGCATCAGTAGGAGGGTCCCCGGGATCCGGCGGCAGCTCCTCGCCAGCCCCCCGAGGAGCACGAGCTaGGGCCCGAGGAGGACCACG +
Preference number: 4 (lower is better)
Translates to: TGISRRVPGIRRQLLASPPRSTS*GPRRTT
Trigger: CGTGGTCCTCCTCGGGCCGCAGCTCGTGCTCCTCGG...GGGGCTGGCGAGGAGCTGCCGCCGGATCCCGGGGACCCTCCTACTGATGCCCGT
73% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR CCA 90 bp GTGGTGACCACGGGCATCAGTAGGAGGGTCCCCGGGATCCGGCGGCAGCTCCTCAGGCCCAGCGCCGCATaGCTCCGTCCCGAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: VVTTGISRRVPGIRRQLLRPSAA*LRPEAA
Trigger: AGCCGCCTCGGGACGGAGCCATGCGGCGCTGGGCCT...GAGGAGCTGCCGCCGGATCCCGGGGACCCTCCTACTGATGCCCGTGGTCACCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR CCA 90 bp CGGGCATCAGTAGGAGGGTCCCCGGGATCCGGCGGCAGCTCCTCGCCAGCCCCCTCAGGTCCTGAGGCCTaGGATGGCTTGGGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RASVGGSPGSGGSSSPAPSGPEA*DGLGAS
Trigger: CGAGGCCCCCAAGCCATCCCAGGCCTCAGGACCTGA...GGGGGCTGGCGAGGAGCTGCCGCCGGATCCCGGGGACCCTCCTACTGATGCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR TCA 90 bp ATTGTGGTGACCACGGGCATCAGTAGGAGGGTCCCCGGGATCCGGCGGCAGCTCCCCTGCAGCCGGCAGTaGAAGGCCTCGCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: IVVTTGISRRVPGIRRQLPCSRQ*KASPTS
Trigger: GCTGGTGGGCGAGGCCTTTCACTGCCGGCTGCAGGG...GAGCTGCCGCCGGATCCCGGGGACCCTCCTACTGATGCCCGTGGTCACCACAAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR GCA 90 bp ATTGTGGTGACCACGGGCATCAGTAGGAGGGTCCCCGGGATCCGGCGGCAGCTCGCGCGCTGGCCAGGCTaGTGCGTCCTCTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: IVVTTGISRRVPGIRRQLARWPG*CVLCAS
Trigger: GGAGGCACAGAGGACGCAGCAGCCTGGCCAGCGCGC...GAGCTGCCGCCGGATCCCGGGGACCCTCCTACTGATGCCCGTGGTCACCACAAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR GCA 90 bp ACCACGGGCATCAGTAGGAGGGTCCCCGGGATCCGGCGGCAGCTCCTCGCCAGCTGTCCAGCCTGCAGCTaGAGCAGCCCCTGCACCTGT +
Preference number: 4 (lower is better)
Translates to: TTGISRRVPGIRRQLLASCPACS*SSPCTC
Trigger: ACAGGTGCAGGGGCTGCTGCAGCTGCAGGCTGGACA...GCTGGCGAGGAGCTGCCGCCGGATCCCGGGGACCCTCCTACTGATGCCCGTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR CCA 90 bp ATTGTGGTGACCACGGGCATCAGTAGGAGGGTCCCCGGGATCCGGCGGCAGCTCGGGGGATCTGCGCGCTaGCCAGGCTGCTGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: IVVTTGISRRVPGIRRQLGGSAR*PGCCVL
Trigger: GAGGACGCAGCAGCCTGGCCAGCGCGCAGATCCCCC...GAGCTGCCGCCGGATCCCGGGGACCCTCCTACTGATGCCCGTGGTCACCACAAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR GCA 90 bp CTCTTTATTGTGGTGACCACGGGCATCAGTAGGAGGGTCCCCGGGATCCGGCGGCTGCTGCGTCCTCTGTaGCTCCCGCCGGGCCCCGAC +
Preference number: 4 (lower is better)
Translates to: LFIVVTTGISRRVPGIRRLLRPL*LPPGPD
Trigger: GTCGGGGCCCGGCGGGAGGCACAGAGGACGCAGCAG...CCGCCGGATCCCGGGGACCCTCCTACTGATGCCCGTGGTCACCACAATAAAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR GCA 90 bp ACGGGCATCAGTAGGAGGGTCCCCGGGATCCGGCGGCAGCTCCTCGCCAGCCCCGCGGCTTCTTGTCCCTaGTTCCGCACCGCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: TGISRRVPGIRRQLLASPAASCP*FRTASL
Trigger: TAAGGAAGCGGTGCGGAAGCAGGGACAAGAAGCCGC...GGGGCTGGCGAGGAGCTGCCGCCGGATCCCGGGGACCCTCCTACTGATGCCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR CCA 90 bp TTTATTGTGGTGACCACGGGCATCAGTAGGAGGGTCCCCGGGATCCGGCGGCAGCGCTGGCGGTGGCGTTaGGGGGATCTGCGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: FIVVTTGISRRVPGIRRQRWRWR*GDLRAG
Trigger: GCCAGCGCGCAGATCCCCCCAACGCCACCGCCAGCG...CTGCCGCCGGATCCCGGGGACCCTCCTACTGATGCCCGTGGTCACCACAATAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR CCA 90 bp CGGGCATCAGTAGGAGGGTCCCCGGGATCCGGCGGCAGCTCCTCGCCAGCCCCCGGTCCACGTGCAGACTaGCAGAGAACTGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: RASVGGSPGSGGSSSPAPGPRAD*QRTGRC
Trigger: GCATCTTCCAGTTCTCTGCCAGTCTGCACGTGGACC...GGGGGCTGGCGAGGAGCTGCCGCCGGATCCCGGGGACCCTCCTACTGATGCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR TCA 90 bp GGGCTCTTTATTGTGGTGACCACGGGCATCAGTAGGAGGGTCCCCGGGATCCGGAGCCCGCCTGGATGGTaGGGACGGCCCCGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: GLFIVVTTGISRRVPGIRSPPGW*GRPRSH
Trigger: ATGGCTCCGGGGCCGTCCTCACCATCCAGGCGGGCT...CCGGATCCCGGGGACCCTCCTACTGATGCCCGTGGTCACCACAATAAAGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR GCA 90 bp TTTATTGTGGTGACCACGGGCATCAGTAGGAGGGTCCCCGGGATCCGGCGGCAGCTGGGCGCCCTCACGTaGCCAGGAGCAGCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: FIVVTTGISRRVPGIRRQLGALT*PGAARR
Trigger: TCTCCGGGCTGCTCCTGGGCACGTGAGGGCGCCCAG...CTGCCGCCGGATCCCGGGGACCCTCCTACTGATGCCCGTGGTCACCACAATAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR CCA 90 bp CTCTTTATTGTGGTGACCACGGGCATCAGTAGGAGGGTCCCCGGGATCCGGCGGAGGCCTGGGATGGCTTaGGGGCCTCGGGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LFIVVTTGISRRVPGIRRRPGMA*GPRAAP
Trigger: AGGGGCTGCCCGAGGCCCCCAAGCCATCCCAGGCCT...CCGCCGGATCCCGGGGACCCTCCTACTGATGCCCGTGGTCACCACAATAAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR CCA 90 bp CCACGGGCATCAGTAGGAGGGTCCCCGGGATCCGGCGGCAGCTCCTCGCCAGCCTTCAGCCATGTCATGTaGGCGTCGGAGAACTCAGGT +
Preference number: 4 (lower is better)
Translates to: PRASVGGSPGSGGSSSPAFSHVM*ASENSG
Trigger: ACCTGAGTTCTCCGACGCCCACATGACATGGCTGAA...GGCTGGCGAGGAGCTGCCGCCGGATCCCGGGGACCCTCCTACTGATGCCCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR TCA 90 bp ACCACGGGCATCAGTAGGAGGGTCCCCGGGATCCGGCGGCAGCTCCTCGCCAGCGGGACTCAATACAGATaGGAACACACACCACGTCCC +
Preference number: 4 (lower is better)
Translates to: TTGISRRVPGIRRQLLASGTQYR*EHTPRP
Trigger: GGGACGTGGTGTGTGTTCTCATCTGTATTGAGTCCC...GCTGGCGAGGAGCTGCCGCCGGATCCCGGGGACCCTCCTACTGATGCCCGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR GCA 90 bp GTGGTGACCACGGGCATCAGTAGGAGGGTCCCCGGGATCCGGCGGCAGCTCCTCTCACTGTGGTCCACGTaGAGACTGGCAGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: VVTTGISRRVPGIRRQLLSLWST*RLAENW
Trigger: CCAGTTCTCTGCCAGTCTGCACGTGGACCACAGTGA...GAGGAGCTGCCGCCGGATCCCGGGGACCCTCCTACTGATGCCCGTGGTCACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR GCA 90 bp ATTGTGGTGACCACGGGCATCAGTAGGAGGGTCCCCGGGATCCGGCGGCAGCTCAGCTGCAGCAGCCCCTaGACCTGTAGCGTGAAGACC +
Preference number: 4 (lower is better)
Translates to: IVVTTGISRRVPGIRRQLSCSSP*TCSVKT
Trigger: GGTCTTCACGCTACAGGTGCAGGGGCTGCTGCAGCT...GAGCTGCCGCCGGATCCCGGGGACCCTCCTACTGATGCCCGTGGTCACCACAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR CCA 90 bp GAGGGTGGAGGGCTCTTTATTGTGGTGACCACGGGCATCAGTAGGAGGGTCCCCAAGCTGGAGCCCGCCTaGATGGTGAGGACGGCCCCG +
Preference number: 4 (lower is better)
Translates to: EGGGLFIVVTTGISRRVPKLEPA*MVRTAP
Trigger: CGGGGCCGTCCTCACCATCCAGGCGGGCTCCAGCTT...GGGGACCCTCCTACTGATGCCCGTGGTCACCACAATAAAGAGCCCTCCACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR GCA 90 bp GAGGGTGGAGGGCTCTTTATTGTGGTGACCACGGGCATCAGTAGGAGGGTCCCCAGCCGGGCCTTGCCCTaGAGCTCACTGTGGTCCACG +
Preference number: 4 (lower is better)
Translates to: EGGGLFIVVTTGISRRVPSRALP*SSLWST
Trigger: CGTGGACCACAGTGAGCTGCAGGGCAAGGCCCGGCT...GGGGACCCTCCTACTGATGCCCGTGGTCACCACAATAAAGAGCCCTCCACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR GCA 90 bp GAGGGTGGAGGGCTCTTTATTGTGGTGACCACGGGCATCAGTAGGAGGGTCCCCGCGTACTGTCCAGCCTaGAGCTGCAGCAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: EGGGLFIVVTTGISRRVPAYCPA*SCSSPC
Trigger: GCAGGGGCTGCTGCAGCTGCAGGCTGGACAGTACGC...GGGGACCCTCCTACTGATGCCCGTGGTCACCACAATAAAGAGCCCTCCACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR CCA 90 bp CTCTTTATTGTGGTGACCACGGGCATCAGTAGGAGGGTCCCCGGGATCCGGCGGTGCACCTGGAGGTCCTaGGGGACCGAAGAGATCCCG +
Preference number: 4 (lower is better)
Translates to: LFIVVTTGISRRVPGIRRCTWRS*GTEEIP
Trigger: CGGGATCTCTTCGGTCCCCCAGGACCTCCAGGTGCA...CCGCCGGATCCCGGGGACCCTCCTACTGATGCCCGTGGTCACCACAATAAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR TCA 90 bp GGAGGGCTCTTTATTGTGGTGACCACGGGCATCAGTAGGAGGGTCCCCGGGATCGGAGAACTCAGGTCCTaGGGCCTGGGATGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: GGLFIVVTTGISRRVPGIGELRS*GLGWLG
Trigger: CCCAAGCCATCCCAGGCCTCAGGACCTGAGTTCTCC...GATCCCGGGGACCCTCCTACTGATGCCCGTGGTCACCACAATAAAGAGCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR GCA 90 bp GAGGGTGGAGGGCTCTTTATTGTGGTGACCACGGGCATCAGTAGGAGGGTCCCCGGAGCCTGGAAACCATaGAGCTCCACCAGCGTCCGC +
Preference number: 4 (lower is better)
Translates to: EGGGLFIVVTTGISRRVPGAWKP*SSTSVR
Trigger: GCGGACGCTGGTGGAGCTGCATGGTTTCCAGGCTCC...GGGGACCCTCCTACTGATGCCCGTGGTCACCACAATAAAGAGCCCTCCACCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR CCA 90 bp GGGCTCTTTATTGTGGTGACCACGGGCATCAGTAGGAGGGTCCCCGGGATCCGGCGCAGGAAGGCACCTTaGGCAGCAGGAGCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: GLFIVVTTGISRRVPGIRRRKAP*AAGAWK
Trigger: TTTCCAGGCTCCTGCTGCCCAAGGTGCCTTCCTGCG...CCGGATCCCGGGGACCCTCCTACTGATGCCCGTGGTCACCACAATAAAGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR CCA 90 bp GGTGGAGGGCTCTTTATTGTGGTGACCACGGGCATCAGTAGGAGGGTCCCCGGGCCCTGCAGCTCACTGTaGTCCACGTGCAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: GGGLFIVVTTGISRRVPGPCSSL*STCRLA
Trigger: TGCCAGTCTGCACGTGGACCACAGTGAGCTGCAGGG...CCCGGGGACCCTCCTACTGATGCCCGTGGTCACCACAATAAAGAGCCCTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR CCA 90 bp GAGGGTGGAGGGCTCTTTATTGTGGTGACCACGGGCATCAGTAGGAGGGTCCCCAGAACCGGCGCTCCGTaGCCTCTTTCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: EGGGLFIVVTTGISRRVPRTGAP*PLSAAP
Trigger: AGGAGCTGCTGAAAGAGGCCACGGAGCGCCGGTTCT...GGGGACCCTCCTACTGATGCCCGTGGTCACCACAATAAAGAGCCCTCCACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR CCA 90 bp GGAGGGCTCTTTATTGTGGTGACCACGGGCATCAGTAGGAGGGTCCCCGGGATCTGGGCAGCAGGAGCCTaGAAACCATGCAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: GGLFIVVTTGISRRVPGIWAAGA*KPCSST
Trigger: GGTGGAGCTGCATGGTTTCCAGGCTCCTGCTGCCCA...GATCCCGGGGACCCTCCTACTGATGCCCGTGGTCACCACAATAAAGAGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR CCA 90 bp GAGGGTGGAGGGCTCTTTATTGTGGTGACCACGGGCATCAGTAGGAGGGTCCCCAGGCACGTGTGGCGCTaGCACAGGGACTCAATACAG +
Preference number: 4 (lower is better)
Translates to: EGGGLFIVVTTGISRRVPRHVWR*HRDSIQ
Trigger: CTGTATTGAGTCCCTGTGCCAGCGCCACACGTGCCT...GGGGACCCTCCTACTGATGCCCGTGGTCACCACAATAAAGAGCCCTCCACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR TCA 90 bp CTCTTTATTGTGGTGACCACGGGCATCAGTAGGAGGGTCCCCGGGATCCGGCGGGGCTCTTTATTGTGGTaGCCACGGGCATCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: LFIVVTTGISRRVPGIRRGSLLW*PRASVG
Trigger: TCCTACTGATGCCCGTGGTCACCACAATAAAGAGCC...CCGCCGGATCCCGGGGACCCTCCTACTGATGCCCGTGGTCACCACAATAAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS CCA 90 bp GGGCCTCGGGCAGCCCCTCGCGGGAGGACGCGCTGGCGGTGGCGTTaGGGGGATCTGCGCGCTGGCCAGGCTGCTGCGTCCTCTGTGCCT +
Preference number: 5 (lower is better)
Translates to: GPRAAPRGRTRWRWR*GDLRAGQAAASSVP
Trigger: AGGCACAGAGGACGCAGCAGCCTGGCCAGCGCGCAGATCCCCCCAACGCCACCGCCAGCGCGTCCTCCCGCGAGGGGCTGCCCGAGGCCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS GCA 90 bp ATGAGAACACACACCACGTCCCGGGCCCGCAGCCGGGCCTTGCCCTaGAGCTCACTGTGGTCTGCGGAGAGAGCCCTGGGGAGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: MRTHTTSRARSRALP*SSLWSAERALGRVV
Trigger: CACCACCCTCCCCAGGGCTCTCTCCGCAGACCACAGTGAGCTGCAGGGCAAGGCCCGGCTGCGGGCCCGGGACGTGGTGTGTGTTCTCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462849.1
CDS CCA 90 bp CCAGGGAAGGCATCGCCGGCCAGGAGAAGGACCCACGGCCGCCCTTaGGGGAGTCAGAACCCTGACGTCCCAATGCCACCAGCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: PGKASPARRRTHGRP*GSQNPDVPMPPAGQ
Trigger: CTGCCCTGCTGGTGGCATTGGGACGTCAGGGTTCTGACTCCCCCAAGGGCGGCCGTGGGTCCTTCTCCTGGCCGGCGATGCCTTCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486627.1
CDS TCA 90 bp GGCCAGGAGAAGGACCCACGGCCGCCCTTGGGGGAGTCAGAACCCTaGCGTCCCAATGCCACCAGCAGGGCAGGCATGCGGGGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: GQEKDPRPPLGESEP*RPNATSRAGMRGFC
Trigger: ACAGAAGCCCCGCATGCCTGCCCTGCTGGTGGCATTGGGACGTCAGGGTTCTGACTCCCCCAAGGGCGGCCGTGGGTCCTTCTCCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486627.1
CDS GCA 90 bp GGACCCACGGCCGCCCTTGGGGGAGTCAGAACCCTGACGTCCCAATaGCACCAGCAGGGCAGGCATGCGGGGCTTCTGTGGACACAGCCA +
Preference number: 5 (lower is better)
Translates to: GPTAALGGVRTLTSQ*HQQGRHAGLLWTQP
Trigger: TGGCTGTGTCCACAGAAGCCCCGCATGCCTGCCCTGCTGGTGGCATTGGGACGTCAGGGTTCTGACTCCCCCAAGGGCGGCCGTGGGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486627.1
CDS-3UTR CAA 90 bp GAGGGTGGAGGGCTCTTTATTGTGGTGACCACGGGCATCAGTAGGAGGGTCCCCGAGGCCTGGGATGGCTaGGGGGCCTCGGGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: EGGGLFIVVTTGISRRVPEAWDG*GASGSP
Trigger: GGGGCTGCCCGAGGCCCCCAAGCCATCCCAGGCCTC...GGGGACCCTCCTACTGATGCCCGTGGTCACCACAATAAAGAGCCCTCCACCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR CAA 90 bp TTTATTGTGGTGACCACGGGCATCAGTAGGAGGGTCCCCGGGATCCGGCGGCAGTCCACCAGCGTCCGCTaGTCCACCCGGCGGGGACCC +
Preference number: 5 (lower is better)
Translates to: FIVVTTGISRRVPGIRRQSTSVR*STRRGP
Trigger: GGGTCCCCGCCGGGTGGACAAGCGGACGCTGGTGGA...CTGCCGCCGGATCCCGGGGACCCTCCTACTGATGCCCGTGGTCACCACAATAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS-3UTR CAA 90 bp GTGACCACGGGCATCAGTAGGAGGGTCCCCGGGATCCGGCGGCAGCTCCTCGCCACGGCCCCGGAGCCATaGTCCACAAACACAGAAGCG +
Preference number: 5 (lower is better)
Translates to: VTTGISRRVPGIRRQLLATAPEP*STNTEA
Trigger: CGCTTCTGTGTTTGTGGACAATGGCTCCGGGGCCGT...GGCGAGGAGCTGCCGCCGGATCCCGGGGACCCTCCTACTGATGCCCGTGGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS CCA 90 bp CGCCCTCACGTGCCCAGGAGCAGCCCGGAGAAGCTGGAGCCCGCCTaGATGGTGAGGACGGCCCCGGAGCCATTGTCCACAAACACAGAA +
Preference number: 5 (lower is better)
Translates to: RPHVPRSSPEKLEPA*MVRTAPEPLSTNTE
Trigger: TTCTGTGTTTGTGGACAATGGCTCCGGGGCCGTCCTCACCATCCAGGCGGGCTCCAGCTTCTCCGGGCTGCTCCTGGGCACGTGAGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330388.2
ENST00000462849.1
ENST00000478606.1
CDS CCA 90 bp AAGGCGCCGTCGTCCGGCCGCCGGACAAAGTTCAGCCATGTCATGTaGGCGTCGGAGAACTCAGGTCCTGAGGCCTGGGATGGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: KAPSSGRRTKFSHVM*ASENSGPEAWDGLG
Trigger: CCCCAAGCCATCCCAGGCCTCAGGACCTGAGTTCTCCGACGCCCACATGACATGGCTGAACTTTGTCCGGCGGCCGGACGACGGCGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS CCA 90 bp GGGCTGCCGCCTGGAGCGGGGGCTGAGGTCACTCACGTGTGGCGCTaGCACAGGGACTCAATACAGATGAGAACACACACCACGTCCCGG +
Preference number: 5 (lower is better)
Translates to: GLPPGAGAEVTHVWR*HRDSIQMRTHTTSR
Trigger: CCGGGACGTGGTGTGTGTTCTCATCTGTATTGAGTCCCTGTGCCAGCGCCACACGTGAGTGACCTCAGCCCCCGCTCCAGGCGGCAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478606.1
CDS CCA 90 bp GTCCGGGGGCTGCCGCCTGGAGCGGGGGCTGAGGTCACTCACGTGTaGCGCTGGCACAGGGACTCAATACAGATGAGAACACACACCACG +
Preference number: 5 (lower is better)
Translates to: VRGLPPGAGAEVTHV*RWHRDSIQMRTHTT
Trigger: CGTGGTGTGTGTTCTCATCTGTATTGAGTCCCTGTGCCAGCGCCACACGTGAGTGACCTCAGCCCCCGCTCCAGGCGGCAGCCCCCGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000478606.1
CDS TCA 90 bp CTGAGGTCACTCACGTGTGGCGCTGGCACAGGGACTCAATACAGATaGGAACACACACCACGTCCCGGGCCCGCAGCCGGGCCTTGCCCT +
Preference number: 5 (lower is better)
Translates to: LRSLTCGAGTGTQYR*EHTPRPGPAAGPCP
Trigger: AGGGCAAGGCCCGGCTGCGGGCCCGGGACGTGGTGTGTGTTCTCATCTGTATTGAGTCCCTGTGCCAGCGCCACACGTGAGTGACCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478606.1
CDS CCA 90 bp CTCGTGAAGCAGAGTCTCCGCGGTCACTTCTGCACCTGGAGGTCCTaGGGGACCGAAGAGATCCCGCGGCTTCTTGTCCCTGCTTCCGCA +
Preference number: 5 (lower is better)
Translates to: LVKQSLRGHFCTWRS*GTEEIPRLLVPASA
Trigger: TGCGGAAGCAGGGACAAGAAGCCGCGGGATCTCTTCGGTCCCCCAGGACCTCCAGGTGCAGAAGTGACCGCGGAGACTCTGCTTCACGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330388.2
ENST00000468365.1
ENST00000486627.1
CDS-3UTR CAA 90 bp GAGGGTGGAGGGCTCTTTATTGTGGTGACCACGGGCATCAGTAGGAGGGTCCCCAGATCCCGCGGCTTCTaGTCCCTGCTTCCGCACCGC +
Preference number: 5 (lower is better)
Translates to: EGGGLFIVVTTGISRRVPRSRGF*SLLPHR
Trigger: GCGGTGCGGAAGCAGGGACAAGAAGCCGCGGGATCT...GGGGACCCTCCTACTGATGCCCGTGGTCACCACAATAAAGAGCCCTCCACCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS TCA 90 bp GACAAAGTTCAGCCATGTCATGTGGGCGTCGGAGAACTCAGGTCCTaGGGCCTGGGATGGCTGAAGGGACGGGACGGGGCTAGCGCACTG +
Preference number: 5 (lower is better)
Translates to: DKVQPCHVGVGELRS*GLGWLKGRDGASAL
Trigger: CAGTGCGCTAGCCCCGTCCCGTCCCTTCAGCCATCCCAGGCCTCAGGACCTGAGTTCTCCGACGCCCACATGACATGGCTGAACTTTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486627.1
CDS CCA 90 bp CTCCTGAAACTCGTGAAGCAGAGTCTCCGCGGTCACTTCTGCACCTaGAGGTCCTGGGGGACCGAAGAGATCCCGCGGCTTCTTGTCCCT +
Preference number: 5 (lower is better)
Translates to: LLKLVKQSLRGHFCT*RSWGTEEIPRLLVP
Trigger: AGGGACAAGAAGCCGCGGGATCTCTTCGGTCCCCCAGGACCTCCAGGTGCAGAAGTGACCGCGGAGACTCTGCTTCACGAGTTTCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330388.2
ENST00000468365.1
ENST00000486627.1
CDS TCA 72 bp CGCTTGTCCACCCGGCGGGGACCCTGCAGCCGGCAGTaGAAGGCCTCGCCCACCAGCCGCAGGCCCGCCCCC +
Preference number: 6 (lower is better)
Translates to: RLSTRRGPCSRQ*KASPTSRRPAP
Trigger: GGGGGCGGGCCTGCGGCTGGTGGGCGAGGCCTTTCACTGCCGGCTGCAGGGTCCCCGCCGGGTGGACAAGCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330388.2
ENST00000468365.1
ENST00000486627.1
CDS GCA 72 bp GGGATCTGCGCGCTGGCCAGGCTGCTGCGTCCTCTGTaGCTCCCGCCGGGCCCCGACGCCCCCGAGGAGCAC +
Preference number: 6 (lower is better)
Translates to: GICALARLLRPL*LPPGPDAPEEH
Trigger: GTGCTCCTCGGGGGCGTCGGGGCCCGGCGGGAGGCACAGAGGACGCAGCAGCCTGGCCAGCGCGCAGATCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS GCA 72 bp CACACCACGTCCCGGGCCCGCAGCCGGGCCTTGCCCTaGAGCTCACTGTGGTCTGCGGAGAGAGCCCTGGGG +
Preference number: 6 (lower is better)
Translates to: HTTSRARSRALP*SSLWSAERALG
Trigger: CCCCAGGGCTCTCTCCGCAGACCACAGTGAGCTGCAGGGCAAGGCCCGGCTGCGGGCCCGGGACGTGGTGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462849.1
CDS CCA 72 bp CGGGCCCGCAGCCGGGCCTTGCCCTGCAGCTCACTGTaGTCTGCGGAGAGAGCCCTGGGGAGGGTGGTGCAT +
Preference number: 6 (lower is better)
Translates to: RARSRALPCSSL*SAERALGRVVH
Trigger: ATGCACCACCCTCCCCAGGGCTCTCTCCGCAGACCACAGTGAGCTGCAGGGCAAGGCCCGGCTGCGGGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462849.1
CDS GCA 72 bp CACACCACGTCCCGGGCCCGCAGCCGGGCCTTGCCCTaGAGCTCACTGTGGTCCACGTGCAGACTGGCAGAG +
Preference number: 6 (lower is better)
Translates to: HTTSRARSRALP*SSLWSTCRLAE
Trigger: CTCTGCCAGTCTGCACGTGGACCACAGTGAGCTGCAGGGCAAGGCCCGGCTGCGGGCCCGGGACGTGGTGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS TCA 72 bp CAGCCATGTCATGTGGGCGTCGGAGAACTCAGGTCCTaGGGCCTGGGATGGCTTGGGGGCCTCGGGCAGCCC +
Preference number: 6 (lower is better)
Translates to: QPCHVGVGELRS*GLGWLGGLGQP
Trigger: GGGCTGCCCGAGGCCCCCAAGCCATCCCAGGCCTCAGGACCTGAGTTCTCCGACGCCCACATGACATGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330388.2
CDS TCA 72 bp AAGGACCCACGGCCGCCCTTGGGGGAGTCAGAACCCTaGCGTCCCAATGCCACCAGCAGGGCAGGCATGCGG +
Preference number: 6 (lower is better)
Translates to: KDPRPPLGESEP*RPNATSRAGMR
Trigger: CCGCATGCCTGCCCTGCTGGTGGCATTGGGACGTCAGGGTTCTGACTCCCCCAAGGGCGGCCGTGGGTCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486627.1
CDS GCA 72 bp GCCGCCCTTGGGGGAGTCAGAACCCTGACGTCCCAATaGCACCAGCAGGGCAGGCATGCGGGGCTTCTGTGG +
Preference number: 6 (lower is better)
Translates to: AALGGVRTLTSQ*HQQGRHAGLLW
Trigger: CCACAGAAGCCCCGCATGCCTGCCCTGCTGGTGGCATTGGGACGTCAGGGTTCTGACTCCCCCAAGGGCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486627.1
CDS CCA 72 bp GCATCGCCGGCCAGGAGAAGGACCCACGGCCGCCCTTaGGGGAGTCAGAACCCTGACGTCCCAATGCCACCA +
Preference number: 6 (lower is better)
Translates to: ASPARRRTHGRP*GSQNPDVPMPP
Trigger: TGGTGGCATTGGGACGTCAGGGTTCTGACTCCCCCAAGGGCGGCCGTGGGTCCTTCTCCTGGCCGGCGATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486627.1
CDS CAA 90 bp TGCAGCTGCAGCAGCCCCTGCACCTGTAGCGTGAAGACCCTGCTGTaGCTCTCCAGGCCTGAGACGGCCTCCAGGCACGTGTGGCGCTGG +
Preference number: 6 (lower is better)
Translates to: CSCSSPCTCSVKTLL*LSRPETASRHVWRW
Trigger: CCAGCGCCACACGTGCCTGGAGGCCGTCTCAGGCCTGGAGAGCAACAGCAGGGTCTTCACGCTACAGGTGCAGGGGCTGCTGCAGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330388.2
ENST00000462849.1
CDS GCA 72 bp CTGGGGGACCGAAGAGATCCCGCGGCTTCTTGTCCCTaGTTCCGCACCGCTTCCTTAAGGCGCCGTCGTCCG +
Preference number: 6 (lower is better)
Translates to: LGDRRDPAASCP*FRTASLRRRRP
Trigger: CGGACGACGGCGCCTTAAGGAAGCGGTGCGGAAGCAGGGACAAGAAGCCGCGGGATCTCTTCGGTCCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330388.2
ENST00000486627.1
CDS GCA 72 bp AGGAAGGCACCTTGGGCAGCAGGAGCCTGGAAACCATaGAGCTCCACCAGCGTCCGCTTGTCCACCCGGCGG +
Preference number: 6 (lower is better)
Translates to: RKAPWAAGAWKP*SSTSVRLSTRR
Trigger: CCGCCGGGTGGACAAGCGGACGCTGGTGGAGCTGCATGGTTTCCAGGCTCCTGCTGCCCAAGGTGCCTTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330388.2
ENST00000468365.1
CDS CCA 72 bp GCCAGGCTCAGACCGGAGCCTCGCAGGAAGGCACCTTaGGCAGCAGGAGCCTGGAAACCATGCAGCTCCACC +
Preference number: 6 (lower is better)
Translates to: ARLRPEPRRKAP*AAGAWKPCSST
Trigger: GGTGGAGCTGCATGGTTTCCAGGCTCCTGCTGCCCAAGGTGCCTTCCTGCGAGGCTCCGGTCTGAGCCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330388.2
ENST00000468365.1
CDS TCA 72 bp CAGCCATGTCATGTGGGCGTCGGAGAACTCAGGTCCTaGGGCCTGGGATGGCTGAAGGGACGGGACGGGGCT +
Preference number: 6 (lower is better)
Translates to: QPCHVGVGELRS*GLGWLKGRDGA
Trigger: AGCCCCGTCCCGTCCCTTCAGCCATCCCAGGCCTCAGGACCTGAGTTCTCCGACGCCCACATGACATGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486627.1
CDS CCA 72 bp CAGAGTCTCCGCGGTCACTTCTGCACCTGGAGGTCCTaGGGGACCGAAGAGATCCCGCGGCTTCTTGTCCCT +
Preference number: 6 (lower is better)
Translates to: QSLRGHFCTWRS*GTEEIPRLLVP
Trigger: AGGGACAAGAAGCCGCGGGATCTCTTCGGTCCCCCAGGACCTCCAGGTGCAGAAGTGACCGCGGAGACTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330388.2
ENST00000468365.1
ENST00000486627.1
CDS CAA 90 bp GAGAAGCTGGAGCCCGCCTGGATGGTGAGGACGGCCCCGGAGCCATaGTCCACAAACACAGAAGCGTACTGTCCAGCCTGCAGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: EKLEPAWMVRTAPEP*STNTEAYCPACSCS
Trigger: GCTGCAGCTGCAGGCTGGACAGTACGCTTCTGTGTTTGTGGACAATGGCTCCGGGGCCGTCCTCACCATCCAGGCGGGCTCCAGCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330388.2
ENST00000462849.1
ENST00000478606.1
CDS CCA 72 bp TCGTCCGGCCGCCGGACAAAGTTCAGCCATGTCATGTaGGCGTCGGAGAACTCAGGTCCTGAGGCCTGGGAT +
Preference number: 6 (lower is better)
Translates to: SSGRRTKFSHVM*ASENSGPEAWD
Trigger: ATCCCAGGCCTCAGGACCTGAGTTCTCCGACGCCCACATGACATGGCTGAACTTTGTCCGGCGGCCGGACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330388.2
ENST00000486627.1
CDS CCA 72 bp CTGCCGCCTGGAGCGGGGGCTGAGGTCACTCACGTGTaGCGCTGGCACAGGGACTCAATACAGATGAGAACA +
Preference number: 6 (lower is better)
Translates to: LPPGAGAEVTHV*RWHRDSIQMRT
Trigger: TGTTCTCATCTGTATTGAGTCCCTGTGCCAGCGCCACACGTGAGTGACCTCAGCCCCCGCTCCAGGCGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478606.1
CDS CCA 72 bp CCTGGAGCGGGGGCTGAGGTCACTCACGTGTGGCGCTaGCACAGGGACTCAATACAGATGAGAACACACACC +
Preference number: 6 (lower is better)
Translates to: PGAGAEVTHVWR*HRDSIQMRTHT
Trigger: GGTGTGTGTTCTCATCTGTATTGAGTCCCTGTGCCAGCGCCACACGTGAGTGACCTCAGCCCCCGCTCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478606.1