RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C1QTNF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000173918

Ensembl transcript IDs: ENST00000311661.4, ENST00000339142.6, ENST00000354124.7, ENST00000392445.6, ENST00000578229.5, ENST00000579760.6, ENST00000580454.5, ENST00000580474.1, ENST00000581774.5, ENST00000582295.1, ENST00000582625.1, ENST00000583904.5

Found 688 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGTGTaGAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCC +
Preference number: 1 (lower is better)
Translates to: LPPPASRRAGSLEDV*REGRGRSQRVLAGA
Trigger: GGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR TCA 90 bp CTGGGACGCCCTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTaGGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCT +
Preference number: 1 (lower is better)
Translates to: LGRPAATRVSPCGVT*GCVQRGPRKVPEGS
Trigger: AGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAGGGCGTCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR TCA 90 bp GGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTaGTTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGATCTGG +
Preference number: 1 (lower is better)
Translates to: GRGRSQRVLAGAPPW*FHLPSALSRGCGIW
Trigger: CCAGATCCCGCAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR GCA 90 bp TTATTTCCAAGGACTGGAGCCGCGGTGCCGCACCCTGGGACGCCCTaGCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGTGT +
Preference number: 1 (lower is better)
Translates to: LFPRTGAAVPHPGTP*RHPRLAVRGHLRMC
Trigger: ACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAGGGCGTCCCAGGGTGCGGCACCGCGGCTCCAGTCCTTGGAAATAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR GCA 90 bp GGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCATCTaGCGTCAGCTCTCTCCAGAGGCTGCGGGATCTGGGAGCACCGAT +
Preference number: 1 (lower is better)
Translates to: GPRGFSRVPRPGDFI*RQLSPEAAGSGSTD
Trigger: ATCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR GCA 90 bp TGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTaGCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGG +
Preference number: 1 (lower is better)
Translates to: CVQRGPRKVPEGSRG*PALVISSAVSSLQR
Trigger: CCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR GCA 90 bp GGTGGCCATGGGCAGGGCGAGAGCACCGTGGAGACACCGCAACCCTaGTCCAGCTGGTCCTGCAATTGCCACAGGGGCTATTGCCTCTCC +
Preference number: 1 (lower is better)
Translates to: GGHGQGESTVETPQP*SSWSCNCHRGYCLS
Trigger: GGAGAGGCAATAGCCCCTGTGGCAATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGTGCTCTCGCCCTGCCCATGGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR CCA 90 bp ATTTGCCTAATTATTTCCAAGGACTGGAGCCGCGGTGCCGCACCCTaGGACGCCCTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTT +
Preference number: 1 (lower is better)
Translates to: ICLIISKDWSRGAAP*DALPPPASRRAGSL
Trigger: AAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAGGGCGTCCCAGGGTGCGGCACCGCGGCTCCAGTCCTTGGAAATAATTAGGCAAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR CCA 90 bp TGGAGATCAGAGTCTGGGGTGGCCATGGGCAGGGCGAGAGCACCGTaGAGACACCGCAACCCTGCTCCAGCTGGTCCTGCAATTGCCACA +
Preference number: 1 (lower is better)
Translates to: WRSESGVAMGRARAP*RHRNPAPAGPAIAT
Trigger: TGTGGCAATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGTGCTCTCGCCCTGCCCATGGCCACCCCAGACTCTGATCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR CCA 90 bp TCAGCTCTCTCCAGAGGCTGCGGGATCTGGGAGCACCGATCGCTTTaGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAG +
Preference number: 1 (lower is better)
Translates to: SALSRGCGIWEHRSL*LSVCAGRLTECQSQ
Trigger: CTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAGAGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR CCA 90 bp TCTCCTGCCACCCAGCTCCTGAGAGTGAATCCTGACACGGGTGATTaGGACGTGTACTTCCTCTTGACTCTGGTCTCAGGACTGAGGCTC +
Preference number: 1 (lower is better)
Translates to: SPATQLLRVNPDTGD*DVYFLLTLVSGLRL
Trigger: GAGCCTCAGTCCTGAGACCAGAGTCAAGAGGAAGTACACGTCCCAATCACCCGTGTCAGGATTCACTCTCAGGAGCTGGGTGGCAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR CCA 90 bp TTTAATGTTTTCTGGAAAGAGCTGGGGGAGCTTAAGCAGCGAGTGTaGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGAG +
Preference number: 1 (lower is better)
Translates to: FNVFWKELGELKQRV*RSASGHAHSNSASE
Trigger: CTCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTCGCTGCTTAAGCTCCCCCAGCTCTTTCCAGAAAACATTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR TCA 90 bp TACTTCCTCTTGACTCTGGTCTCAGGACTGAGGCTCACAGGAGCCTaGGAAACAGACAAGCGGGAGCTTTCTAGCCCCTTCCAGCTCTCC +
Preference number: 1 (lower is better)
Translates to: YFLLTLVSGLRLTGA*ETDKRELSSPFQLS
Trigger: GGAGAGCTGGAAGGGGCTAGAAAGCTCCCGCTTGTCTGTTTCTCAGGCTCCTGTGAGCCTCAGTCCTGAGACCAGAGTCAAGAGGAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR CCA 90 bp CACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAAGTTCCTACGTaGCTTAAAAGAATTAAGCCAGAGGTAGTTTCCTGCCCCCGGCCC +
Preference number: 1 (lower is better)
Translates to: HRDVRVHLSLKKVPT*LKRIKPEVVSCPRP
Trigger: GGGCCGGGGGCAGGAAACTACCTCTGGCTTAATTCTTTTAAGCCACGTAGGAACTTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR TCA 90 bp CCCCAGAGCTTTAACTTTGGATCTTCTCTTAAGCAGAGTCTCAACTaGAAAGGCCTCTCTCTTGGGAGCCAGCAGGCTGGCTGGAAAGAC +
Preference number: 1 (lower is better)
Translates to: PQSFNFGSSLKQSLN*KGLSLGSQQAGWKD
Trigger: GTCTTTCCAGCCAGCCTGCTGGCTCCCAAGAGAGAGGCCTTTTCAGTTGAGACTCTGCTTAAGAGAAGATCCAAAGTTAAAGCTCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR CCA 90 bp GCCGCACCCTGGGACGCCCTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTTCGGGGAAGAGGCGGTaGGGTCAGCACAGCGCAGGG +
Preference number: 2 (lower is better)
Translates to: AAPWDALPPPASRRAGSLSGKRR*GQHSAG
Trigger: CCCTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGA...AAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAGGGCGTCCCAGGGTGCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR CAA 90 bp CCTGGGACGCCCTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTaGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTC +
Preference number: 2 (lower is better)
Translates to: PGTPCRHPRLAVRGH*RMCAERAAEGPRGF
Trigger: GAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAGGGCGTCCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR-3UTR GCA 90 bp CCTGGGACGCCCTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGGAGGGTTCTCGCGGGTaGCCCGCCCTGGTGATTTCA +
Preference number: 2 (lower is better)
Translates to: PGTPCRHPRLAVRGHLRMEGSRG*PALVIS
Trigger: TGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTC...CATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAGGGCGTCCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR-3UTR CCA 90 bp CTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGTGTGCAGAGAGTCGGGGAAGAGGCGGTaGGGTCAGCACAGCGCAGGG +
Preference number: 2 (lower is better)
Translates to: LPPPASRRAGSLEDVCRESGKRR*GQHSAG
Trigger: CCCTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGA...CTCTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR-3UTR CCA 90 bp CCCTGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCTGGGAGGCTGACGCCTaGGGCCCCAGCCCCCATCAC +
Preference number: 2 (lower is better)
Translates to: PWPLSGALRLLLPTWSQGWEADA*GPSPHH
Trigger: GTGATGGGGGCTGGGGCCCCAGGCGTCAGCCTCCCA...GCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR GCA 90 bp GAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCGCTCTCTCCAGAGGCTaGGGGATCTGGGAGCACCGA +
Preference number: 2 (lower is better)
Translates to: EDVCREGRGRSQRVLAGAALSRG*GIWEHR
Trigger: TCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAGAGC...GGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR-3UTR CCA 90 bp TGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCAGGTGGGAGGCTGACGCCTaGGGCCCCAGCCCCCATCAC +
Preference number: 2 (lower is better)
Translates to: WPLSGALRLLLPTWSQGRWEADA*GPSPHH
Trigger: GTGATGGGGGCTGGGGCCCCAGGCGTCAGCCTCCCA...CCTGCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR CCA 90 bp GGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGAGTCTGACCCGCGGGGTGGCACAGGGGTaGAGCAGAGCCACACATGGA +
Preference number: 2 (lower is better)
Translates to: GALLPGTPTATRLQSLTRGVAQG*SRATHG
Trigger: TCCATGTGTGGCTCTGCTCCACCCCTGTGCCACCCC...GCGGGTCAGACTCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR TCA 90 bp CCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCTGCAGGGCGTCTCACTaGATGCCAAAGCCAGGGAGT +
Preference number: 2 (lower is better)
Translates to: PPASRRAGSLEDVCREGRCRASH*MPKPGS
Trigger: ACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCA...GCGGCCCTCTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR-3UTR TCA 90 bp AGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCTGCAGGGCGTCTCACTaGATGCCAAAGCCAGGGAGT +
Preference number: 2 (lower is better)
Translates to: RAAEGPRGFSRVPRPGDFCRASH*MPKPGS
Trigger: ACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCA...GAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR-3UTR TCA 90 bp GGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGAGTCTGACCCGCCTCTGGTCTCAGGACTaGGGCTCACAGGAGCCTGAG +
Preference number: 2 (lower is better)
Translates to: GALLPGTPTATRLQSLTRLWSQD*GSQEPE
Trigger: CTCAGGCTCCTGTGAGCCTCAGTCCTGAGACCAGAG...GCGGGTCAGACTCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR CCA 90 bp GAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCAGAGGCTGCGGGATCTaGGAGCACCGATCGCTTTGG +
Preference number: 2 (lower is better)
Translates to: EDVCREGRGRSQRVLAGARGCGI*EHRSLW
Trigger: CCAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCT...GGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR-3UTR CCA 90 bp GGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGAGTCTGACCCGCCCCCTCTCAGGCTACTaGTCAGAGGCCTGGATGAGG +
Preference number: 2 (lower is better)
Translates to: GALLPGTPTATRLQSLTRPLSGY*SEAWMR
Trigger: CCTCATCCAGGCCTCTGACCAGTAGCCTGAGAGGGG...GCGGGTCAGACTCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR CCA 90 bp GCAGCGAGTGTGGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGACCCTGGGCATCAACATaGGGTGAGGTGGAGAGGGGC +
Preference number: 2 (lower is better)
Translates to: AASVALCFRARPQQLGFRPWAST*GEVERG
Trigger: GCCCCTCTCCACCTCACCCCATGTTGATGCCCAGGG...TCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTCGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR TCA 90 bp GAGTGTGGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGAGTCTGCCGTGCGGGGTCACTTaGGGATGTGTGCAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: ECGALLPGTPTATRLQSLPCGVT*GCVQRG
Trigger: CCCTCTCTGCACACATCCTCAAGTGACCCCGCACGG...CAGACTCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR GCA 90 bp CCCTGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCGCTCTCTCCAGAGGCTaGGGGATCTGGGAGCACCGA +
Preference number: 2 (lower is better)
Translates to: PWPLSGALRLLLPTWSQGALSRG*GIWEHR
Trigger: TCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAGAGC...GCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR TCA 90 bp CGCGGGTGCCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGTGCAGGGCGTCTCACTaGATGCCAAAGCCAGGGAGT +
Preference number: 2 (lower is better)
Translates to: RGCPALVISSAVSSLQRLCRASH*MPKPGS
Trigger: ACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCA...CAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCACCCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR-3UTR GCA 90 bp GCAGCGAGTGTGGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGAGGGCGTCTCACTGAATaGCAAAGCCAGGGAGTCGGA +
Preference number: 2 (lower is better)
Translates to: AASVALCFRARPQQLGFRGRLTE*QSQGVG
Trigger: TCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCC...TCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTCGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR GCA 90 bp GAGTGTGGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGAGTCTGCAGGAGCCCTTCGGCTaGTTCTACCAACCTGGAGCC +
Preference number: 2 (lower is better)
Translates to: ECGALLPGTPTATRLQSLQEPFG*FYQPGA
Trigger: GGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTG...CAGACTCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR CCA 90 bp TTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGAGAGGCTGCGGGATCTaGGAGCACCGATCGCTTTGG +
Preference number: 2 (lower is better)
Translates to: LRMCAERAAEGPRGFSRVRGCGI*EHRSLW
Trigger: CCAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCT...CACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR-3UTR CCA 90 bp CCAGCGGGTAGCAAGAGTGACCCTGGGCATCAACATGGGGTGAGGTGGAGAGGGGGGGTGGCACAGGGGTaGAGCAGAGCCACACATGGA +
Preference number: 2 (lower is better)
Translates to: PAGSKSDPGHQHGVRWRGGVAQG*SRATHG
Trigger: TCCATGTGTGGCTCTGCTCCACCCCTGTGCCACCCC...CCCTCTCCACCTCACCCCATGTTGATGCCCAGGGTCACTCTTGCTACCCGCTGG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR TCA 90 bp GTGCCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGATGCAGGGCGTCTCACTaGATGCCAAAGCCAGGGAGT +
Preference number: 2 (lower is better)
Translates to: VPRPGDFICRQLSPEAAGCRASH*MPKPGS
Trigger: ACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCA...TCCCGCAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR-3UTR GCA 90 bp CCCTGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCTCACTTGAGGATGTGTaGAGAGAGGGCCGCGGAAGG +
Preference number: 2 (lower is better)
Translates to: PWPLSGALRLLLPTWSQGSLEDV*REGRGR
Trigger: CCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGA...GCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR GCA 90 bp GGCGAGAGCACCGTGGAGACACCGCAACCCTGCTCCAGCTGGTCCTGCAATTGCTCACTTGAGGATGTGTaGAGAGAGGGCCGCGGAAGG +
Preference number: 2 (lower is better)
Translates to: GESTVETPQPCSSWSCNCSLEDV*REGRGR
Trigger: CCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGA...GCAATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGTGCTCTCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR GCA 90 bp AGCGGGGGTTTGGGGGCCCAGCGGGTAGCAAGAGTGACCCTGGGCATCAACATGGGCTATTGCCTCTCCTaGCACCCAGCTCCTGAGAGT +
Preference number: 2 (lower is better)
Translates to: SGGLGAQRVARVTLGINMGYCLS*HPAPES
Trigger: ACTCTCAGGAGCTGGGTGGCAGGAGAGGCAATAGCC...CATGTTGATGCCCAGGGTCACTCTTGCTACCCGCTGGGCCCCCAAACCCCCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR CCA 90 bp CGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGGGAAGAGGCGGTaGGGTCAGCACAGCGCAGGG +
Preference number: 2 (lower is better)
Translates to: RFGFLCVQGVSLNAKARESGKRR*GQHSAG
Trigger: CCCTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGA...CTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
3UTR-3UTR CCA 90 bp CCCTGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCATTATTTCCAAGGACTaGAGCCGCGGTGCCGCACCC +
Preference number: 2 (lower is better)
Translates to: PWPLSGALRLLLPTWSQGIISKD*SRGAAP
Trigger: GGGTGCGGCACCGCGGCTCCAGTCCTTGGAAATAAT...GCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR CCA 90 bp GGCGAGAGCACCGTGGAGACACCGCAACCCTGCTCCAGCTGGTCCTGCAATTGCAAAAGGCCTCTCTCTTaGGAGCCAGCAGGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: GESTVETPQPCSSWSCNCKRPLS*EPAGWL
Trigger: CAGCCAGCCTGCTGGCTCCCAAGAGAGAGGCCTTTT...GCAATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGTGCTCTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR TCA 90 bp CAGAGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAGGTGCCCCGCCCTGGTaGTTTCATCTGCCGTCAGCT +
Preference number: 2 (lower is better)
Translates to: QSPWARPQGCQGPPIPQEGAPPW*FHLPSA
Trigger: AGCTGACGGCAGATGAAATCACCAGGGCGGGGCACC...TTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR GCA 90 bp GCAGCGAGTGTGGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGACTGGATCAGCCTTGCTaGCAACCAACACAACACACG +
Preference number: 2 (lower is better)
Translates to: AASVALCFRARPQQLGFRLDQPC*QPTQHT
Trigger: CGTGTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAG...TCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTCGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR CCA 90 bp CCAGCGGGTAGCAAGAGTGACCCTGGGCATCAACATGGGGTGAGGTGGAGAGGGAAAAGGCCTCTCTCTTaGGAGCCAGCAGGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: PAGSKSDPGHQHGVRWRGKRPLS*EPAGWL
Trigger: CAGCCAGCCTGCTGGCTCCCAAGAGAGAGGCCTTTT...CCCTCTCCACCTCACCCCATGTTGATGCCCAGGGTCACTCTTGCTACCCGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR CCA 90 bp GTGGGGGCAGAAGGGGTCTGGATCAGCCTTGCTGCCAACCAACACAACACACGTAAGCCGATGCCAGGGTaGCAGGCATGGAGACCACCC +
Preference number: 2 (lower is better)
Translates to: VGAEGVWISLAANQHNTRKPMPG*QAWRPP
Trigger: GGGTGGTCTCCATGCCTGCCACCCTGGCATCGGCTT...ACGTGTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACCCCTTCTGCCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR TCA 90 bp AGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAAGTCCGTGCGGGGTCACTTaGGGATGTGTGCAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: SPWARPQGCQGPPIPQESPCGVT*GCVQRG
Trigger: CCCTCTCTGCACACATCCTCAAGTGACCCCGCACGG...ACTTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR GCA 90 bp CCCTGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCCCTGGTGATTTCATCTaGCGTCAGCTCTCTCCAGAG +
Preference number: 2 (lower is better)
Translates to: PWPLSGALRLLLPTWSQGPGDFI*RQLSPE
Trigger: CTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGG...GCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR GCA 90 bp AGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAAGTGAGGGTTCTCGCGGGTaGCCCGCCCTGGTGATTTCA +
Preference number: 2 (lower is better)
Translates to: SPWARPQGCQGPPIPQESEGSRG*PALVIS
Trigger: TGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTC...ACTTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR GCA 90 bp CCAGCGGGTAGCAAGAGTGACCCTGGGCATCAACATGGGGTGAGGTGGAGAGGGAGCTGGTCCTGCAATTaGCACAGGGGCTATTGCCTC +
Preference number: 2 (lower is better)
Translates to: PAGSKSDPGHQHGVRWRGSWSCN*HRGYCL
Trigger: GAGGCAATAGCCCCTGTGGCAATTGCAGGACCAGCT...CCCTCTCCACCTCACCCCATGTTGATGCCCAGGGTCACTCTTGCTACCCGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR CCA 90 bp GGCAGTGGGGGCAGAAGGGGTCTGGATCAGCCTTGCTGCCAACCAACACAACACAAAAGGCCTCTCTCTTaGGAGCCAGCAGGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: GSGGRRGLDQPCCQPTQHKRPLS*EPAGWL
Trigger: CAGCCAGCCTGCTGGCTCCCAAGAGAGAGGCCTTTT...GTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACCCCTTCTGCCCCCACTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR GCA 90 bp CCAGCGGGTAGCAAGAGTGACCCTGGGCATCAACATGGGGTGAGGTGGAGAGGGGGTCTGGATCAGCCTTaGTGCCAACCAACACAACAC +
Preference number: 2 (lower is better)
Translates to: PAGSKSDPGHQHGVRWRGGLDQP*CQPTQH
Trigger: GTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACC...CCCTCTCCACCTCACCCCATGTTGATGCCCAGGGTCACTCTTGCTACCCGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR CCA 90 bp CAGAGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAATTATTTCCAAGGACTaGAGCCGCGGTGCCGCACCC +
Preference number: 2 (lower is better)
Translates to: QSPWARPQGCQGPPIPQEIISKD*SRGAAP
Trigger: GGGTGCGGCACCGCGGCTCCAGTCCTTGGAAATAAT...TTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR CCA 90 bp GGCAGTGGGGGCAGAAGGGGTCTGGATCAGCCTTGCTGCCAACCAACACAACACGAGCAGAGCCACACATaGATGTACCAGGAGCTCTGC +
Preference number: 2 (lower is better)
Translates to: GSGGRRGLDQPCCQPTQHEQSHT*MYQELC
Trigger: GCAGAGCTCCTGGTACATCCATGTGTGGCTCTGCTC...GTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACCCCTTCTGCCCCCACTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR GCA 90 bp GCAGAGCCACACATGGATGTACCAGGAGCTCTGCCCCTCATAGAAACATCTGCAGAGGGTTCTCGCGGGTaGCCCGCCCTGGTGATTTCA +
Preference number: 2 (lower is better)
Translates to: AEPHMDVPGALPLIETSAEGSRG*PALVIS
Trigger: TGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTC...TGCAGATGTTTCTATGAGGGGCAGAGCTCCTGGTACATCCATGTGTGGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR CCA 90 bp CAGCTCCTGAGAGTGAATCCTGACACGGGTGATTGGGACGTGTACTTCCTCTTGGGGGTGGCACAGGGGTaGAGCAGAGCCACACATGGA +
Preference number: 2 (lower is better)
Translates to: QLLRVNPDTGDWDVYFLLGVAQG*SRATHG
Trigger: TCCATGTGTGGCTCTGCTCCACCCCTGTGCCACCCC...CAAGAGGAAGTACACGTCCCAATCACCCGTGTCAGGATTCACTCTCAGGAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR CCA 90 bp CAGCTCCTGAGAGTGAATCCTGACACGGGTGATTGGGACGTGTACTTCCTCTTGAAGCCGATGCCAGGGTaGCAGGCATGGAGACCACCC +
Preference number: 2 (lower is better)
Translates to: QLLRVNPDTGDWDVYFLLKPMPG*QAWRPP
Trigger: GGGTGGTCTCCATGCCTGCCACCCTGGCATCGGCTT...CAAGAGGAAGTACACGTCCCAATCACCCGTGTCAGGATTCACTCTCAGGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR GCA 90 bp CAGCTCCTGAGAGTGAATCCTGACACGGGTGATTGGGACGTGTACTTCCTCTTGGGGCGTCTCACTGAATaGCAAAGCCAGGGAGTCGGA +
Preference number: 2 (lower is better)
Translates to: QLLRVNPDTGDWDVYFLLGRLTE*QSQGVG
Trigger: TCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCC...CAAGAGGAAGTACACGTCCCAATCACCCGTGTCAGGATTCACTCTCAGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR GCA 90 bp CAGCTCCTGAGAGTGAATCCTGACACGGGTGATTGGGACGTGTACTTCCTCTTGCCTCATAGAAACATCTaGAGGCCTGGGGGACCCAGG +
Preference number: 2 (lower is better)
Translates to: QLLRVNPDTGDWDVYFLLPHRNI*RPGGPR
Trigger: CCTGGGTCCCCCAGGCCTGCAGATGTTTCTATGAGG...CAAGAGGAAGTACACGTCCCAATCACCCGTGTCAGGATTCACTCTCAGGAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR CCA 90 bp CAGCTCCTGAGAGTGAATCCTGACACGGGTGATTGGGACGTGTACTTCCTCTTGAAAAGGCCTCTCTCTTaGGAGCCAGCAGGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: QLLRVNPDTGDWDVYFLLKRPLS*EPAGWL
Trigger: CAGCCAGCCTGCTGGCTCCCAAGAGAGAGGCCTTTT...CAAGAGGAAGTACACGTCCCAATCACCCGTGTCAGGATTCACTCTCAGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR GCA 90 bp GGCAGTGGGGGCAGAAGGGGTCTGGATCAGCCTTGCTGCCAACCAACACAACACGGGAGACTGCAGTGCTaGTTGAGGTGTTTTATAAAA +
Preference number: 2 (lower is better)
Translates to: GSGGRRGLDQPCCQPTQHGRLQC*LRCFIK
Trigger: TTTTATAAAACACCTCAAGCAGCACTGCAGTCTCCC...GTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACCCCTTCTGCCCCCACTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR GCA 90 bp CAGCTCCTGAGAGTGAATCCTGACACGGGTGATTGGGACGTGTACTTCCTCTTGGGTCTGGATCAGCCTTaGTGCCAACCAACACAACAC +
Preference number: 2 (lower is better)
Translates to: QLLRVNPDTGDWDVYFLLGLDQP*CQPTQH
Trigger: GTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACC...CAAGAGGAAGTACACGTCCCAATCACCCGTGTCAGGATTCACTCTCAGGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR CCA 90 bp GCAGCGAGTGTGGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGAAAGAAAGTTCCTACGTaGCTTAAAAGAATTAAGCCA +
Preference number: 2 (lower is better)
Translates to: AASVALCFRARPQQLGFRKKVPT*LKRIKP
Trigger: TGGCTTAATTCTTTTAAGCCACGTAGGAACTTTCTT...TCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTCGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR CCA 90 bp AGCGGGGGTTTGGGGGCCCAGCGGGTAGCAAGAGTGACCCTGGGCATCAACATGAAGAAAGTTCCTACGTaGCTTAAAAGAATTAAGCCA +
Preference number: 2 (lower is better)
Translates to: SGGLGAQRVARVTLGINMKKVPT*LKRIKP
Trigger: TGGCTTAATTCTTTTAAGCCACGTAGGAACTTTCTT...CATGTTGATGCCCAGGGTCACTCTTGCTACCCGCTGGGCCCCCAAACCCCCGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR CCA 90 bp GGGCTGATTTGTGTGGGAGGCGGCACAGAAAGCCGATGCCAGGGTGGCAGGCATAAGAAAGTTCCTACGTaGCTTAAAAGAATTAAGCCA +
Preference number: 2 (lower is better)
Translates to: GLICVGGGTESRCQGGRHKKVPT*LKRIKP
Trigger: TGGCTTAATTCTTTTAAGCCACGTAGGAACTTTCTT...ATGCCTGCCACCCTGGCATCGGCTTTCTGTGCCGCCTCCCACACAAATCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR TCA 72 bp CCTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTaGGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCA +
Preference number: 3 (lower is better)
Translates to: PAATRVSPCGVT*GCVQRGPRKVP
Trigger: TGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR GCA 72 bp CCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGTGTaGAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTC +
Preference number: 3 (lower is better)
Translates to: PASRRAGSLEDV*REGRGRSQRVL
Trigger: GAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR CCA 72 bp GAGTCTGGGGTGGCCATGGGCAGGGCGAGAGCACCGTaGAGACACCGCAACCCTGCTCCAGCTGGTCCTGCA +
Preference number: 3 (lower is better)
Translates to: ESGVAMGRARAP*RHRNPAPAGPA
Trigger: TGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGTGCTCTCGCCCTGCCCATGGCCACCCCAGACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR GCA 72 bp GGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCATCTaGCGTCAGCTCTCTCCAGAGGCTGCGGGATCTGGG +
Preference number: 3 (lower is better)
Translates to: GFSRVPRPGDFI*RQLSPEAAGSG
Trigger: CCCAGATCCCGCAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCACCCGCGAGAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR GCA 72 bp AGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTaGCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCT +
Preference number: 3 (lower is better)
Translates to: RGPRKVPEGSRG*PALVISSAVSS
Trigger: AGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR TCA 72 bp AGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTaGTTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGC +
Preference number: 3 (lower is better)
Translates to: RSQRVLAGAPPW*FHLPSALSRGC
Trigger: GCAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR GCA 72 bp GGGCAGGGCGAGAGCACCGTGGAGACACCGCAACCCTaGTCCAGCTGGTCCTGCAATTGCCACAGGGGCTAT +
Preference number: 3 (lower is better)
Translates to: GQGESTVETPQP*SSWSCNCHRGY
Trigger: ATAGCCCCTGTGGCAATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGTGCTCTCGCCCTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR CAA 90 bp CTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGTGTGCAGAGAGGGAGCACCGATCGCTTaGGCTTTCTGTGTGTGCAGG +
Preference number: 3 (lower is better)
Translates to: LPPPASRRAGSLEDVCREGAPIA*AFCVCR
Trigger: CCTGCACACACAGAAAGCCAAAGCGATCGGTGCTCC...CTCTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR-3UTR CAA 90 bp AGCGGGGGTTTGGGGGCCCAGCGGGTAGCAAGAGTGACCCTGGGCATCAACATGGCCGTGCGGGGTCACTaGAGGATGTGTGCAGAGAGG +
Preference number: 3 (lower is better)
Translates to: SGGLGAQRVARVTLGINMAVRGH*RMCAER
Trigger: CCTCTCTGCACACATCCTCAAGTGACCCCGCACGGC...CATGTTGATGCCCAGGGTCACTCTTGCTACCCGCTGGGCCCCCAAACCCCCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR CAA 90 bp GCAGCGAGTGTGGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGAGAAAAGGCCTCTCTCTaGGGAGCCAGCAGGCTGGCT +
Preference number: 3 (lower is better)
Translates to: AASVALCFRARPQQLGFREKASL*GASRLA
Trigger: AGCCAGCCTGCTGGCTCCCAAGAGAGAGGCCTTTTC...TCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTCGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR CAA 90 bp GCAGCGAGTGTGGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGACCTTCTGGGGCTGATTaGTGTGGGAGGCGGCACAGA +
Preference number: 3 (lower is better)
Translates to: AASVALCFRARPQQLGFRPSGAD*CGRRHR
Trigger: TCTGTGCCGCCTCCCACACAAATCAGCCCCAGAAGG...TCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTCGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR CAA 90 bp TGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCAGGGCCGTGCGGGGTCACTaGAGGATGTGTGCAGAGAGG +
Preference number: 3 (lower is better)
Translates to: WPLSGALRLLLPTWSQGRAVRGH*RMCAER
Trigger: CCTCTCTGCACACATCCTCAAGTGACCCCGCACGGC...CCTGCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR CAA 90 bp CCAGCGGGTAGCAAGAGTGACCCTGGGCATCAACATGGGGTGAGGTGGAGAGGGCCTTCTGGGGCTGATTaGTGTGGGAGGCGGCACAGA +
Preference number: 3 (lower is better)
Translates to: PAGSKSDPGHQHGVRWRGPSGAD*CGRRHR
Trigger: TCTGTGCCGCCTCCCACACAAATCAGCCCCAGAAGG...CCCTCTCCACCTCACCCCATGTTGATGCCCAGGGTCACTCTTGCTACCCGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR GCA 72 bp ACCGTGGAGACACCGCAACCCTGCTCCAGCTGGTCCTaGAATTGCCACAGGGGCTATTGCCTCTCCTGCCAC +
Preference number: 3 (lower is better)
Translates to: TVETPQPCSSWS*NCHRGYCLSCH
Trigger: GTGGCAGGAGAGGCAATAGCCCCTGTGGCAATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR CCA 72 bp GAGAGCACCGTGGAGACACCGCAACCCTGCTCCAGCTaGTCCTGCAATTGCCACAGGGGCTATTGCCTCTCC +
Preference number: 3 (lower is better)
Translates to: ESTVETPQPCSS*SCNCHRGYCLS
Trigger: GGAGAGGCAATAGCCCCTGTGGCAATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGTGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR CCA 72 bp TTCTGGAAAGAGCTGGGGGAGCTTAAGCAGCGAGTGTaGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCG +
Preference number: 3 (lower is better)
Translates to: FWKELGELKQRV*RSASGHAHSNS
Trigger: CGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTCGCTGCTTAAGCTCCCCCAGCTCTTTCCAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR CAA 90 bp GAGAGCACCGTGGAGACACCGCAACCCTGCTCCAGCTGGTCCTGCAATTGCCACGGGTCTGGATCAGCCTaGCTGCCAACCAACACAACA +
Preference number: 3 (lower is better)
Translates to: ESTVETPQPCSSWSCNCHGSGSA*LPTNTT
Trigger: TGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACCC...GTGGCAATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGTGCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR GCA 72 bp CTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATaGCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGG +
Preference number: 3 (lower is better)
Translates to: LWLSVCAGRLTE*QSQGVGVQGSG
Trigger: CCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
3UTR CCA 72 bp TCCAGAGGCTGCGGGATCTGGGAGCACCGATCGCTTTaGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGC +
Preference number: 3 (lower is better)
Translates to: SRGCGIWEHRSL*LSVCAGRLTEC
Trigger: GCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR-3UTR CAA 90 bp GGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGAGTCTGACCCGCCCTCCACGGTTTACTTaGCTCCTTTTGAGACCTTTA +
Preference number: 3 (lower is better)
Translates to: GALLPGTPTATRLQSLTRPPRFT*LLLRPL
Trigger: TAAAGGTCTCAAAAGGAGCAAAGTAAACCGTGGAGG...GCGGGTCAGACTCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR-3UTR CAA 90 bp GCAGAGCCACACATGGATGTACCAGGAGCTCTGCCCCTCATAGAAACATCTGCAGAAAAGGCCTCTCTCTaGGGAGCCAGCAGGCTGGCT +
Preference number: 3 (lower is better)
Translates to: AEPHMDVPGALPLIETSAEKASL*GASRLA
Trigger: AGCCAGCCTGCTGGCTCCCAAGAGAGAGGCCTTTTC...TGCAGATGTTTCTATGAGGGGCAGAGCTCCTGGTACATCCATGTGTGGCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR TCA 72 bp ATCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTaGATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATC +
Preference number: 3 (lower is better)
Translates to: IALAFCVCRASH*MPKPGSRSPGI
Trigger: GATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
3UTR-3UTR CAA 90 bp CCAGCGGGTAGCAAGAGTGACCCTGGGCATCAACATGGGGTGAGGTGGAGAGGGCCTCCACGGTTTACTTaGCTCCTTTTGAGACCTTTA +
Preference number: 3 (lower is better)
Translates to: PAGSKSDPGHQHGVRWRGPPRFT*LLLRPL
Trigger: TAAAGGTCTCAAAAGGAGCAAAGTAAACCGTGGAGG...CCCTCTCCACCTCACCCCATGTTGATGCCCAGGGTCACTCTTGCTACCCGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR TCA 72 bp TTTAACTTTGGATCTTCTCTTAAGCAGAGTCTCAACTaGAAAGGCCTCTCTCTTGGGAGCCAGCAGGCTGGC +
Preference number: 3 (lower is better)
Translates to: FNFGSSLKQSLN*KGLSLGSQQAG
Trigger: GCCAGCCTGCTGGCTCCCAAGAGAGAGGCCTTTTCAGTTGAGACTCTGCTTAAGAGAAGATCCAAAGTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
3UTR CCA 72 bp GTCAGGGTCCACCTATCCCTCAAGAAAGTTCCTACGTaGCTTAAAAGAATTAAGCCAGAGGTAGTTTCCTGC +
Preference number: 3 (lower is better)
Translates to: VRVHLSLKKVPT*LKRIKPEVVSC
Trigger: GCAGGAAACTACCTCTGGCTTAATTCTTTTAAGCCACGTAGGAACTTTCTTGAGGGATAGGTGGACCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GCCGCACCCTGGGACGCCCTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTCTGCGGTCGCCCACCTaGGCGAACAAGATCACCACC +
Preference number: 4 (lower is better)
Translates to: AAPWDALPPPASRRAGSLLRSPT*ANKITT
Trigger: GGTGGTGATCTTGTTCGCGCAGGTGGGCGACCGCAG...AAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAGGGCGTCCCAGGGTGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
3UTR CAA 72 bp CCCTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTaGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCC +
Preference number: 4 (lower is better)
Translates to: PCRHPRLAVRGH*RMCAERAAEGP
Trigger: GGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp AGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTCGGCGTAGTGGCTCTTaGACCGCTCCCCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: RGPRKVPEGSRGCPALVIRRSGS*TAPQGP
Trigger: GGGCCCCTGGGGAGCGGTGCAAGAGCCACTACGCCG...AATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp GGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCACGGCGTAGTGGCTCTTaGACCGCTCCCCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GPRKVPEGSRGCPALVISRRSGS*TAPQGP
Trigger: GGGCCCCTGGGGAGCGGTGCAAGAGCCACTACGCCG...TGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp GCCGCACCCTGGGACGCCCTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTACCCACACCTGGTCCTaGTCTCGCAGCTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: AAPWDALPPPASRRAGSLTHTWS*SRSSSI
Trigger: GATGCTGGAGCTGCGAGAGCAGGACCAGGTGTGGGT...AAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAGGGCGTCCCAGGGTGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp GCCGCACCCTGGGACGCCCTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTCAGGAGCCCTTCGGCTaGTTCTACCAACCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: AAPWDALPPPASRRAGSLQEPFG*FYQPGA
Trigger: GGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTG...AAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAGGGCGTCCCAGGGTGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCGGGAGCCCATCTTCCTaGCGGGCCCGTCGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: AKARESESRDRGRGGGVSGSPSS*RARRSG
Trigger: CCCCGAGCGACGGGCCCGGCAGGAAGATGGGCTCCC...GCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583904.5
CDS-3UTR CCA 90 bp AGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTGGGAGGCTGACGCCTaGGGCCCCAGCCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: RGPRKVPEGSRGCPALVIWEADA*GPSPHH
Trigger: GTGATGGGGGCTGGGGCCCCAGGCGTCAGCCTCCCA...AATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp CCTGGGACGCCCTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGGGCTCTGGCTTTGCATaGTGCTGCGGTCGCCCACCT +
Preference number: 4 (lower is better)
Translates to: PGTPCRHPRLAVRGHLRMGSGFA*CCGRPP
Trigger: AGGTGGGCGACCGCAGCATCATGCAAAGCCAGAGCC...CATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAGGGCGTCCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp GGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGAGTCTGACCCGCCGGCGTAGTGGCTCTTaGACCGCTCCCCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GALLPGTPTATRLQSLTRRRSGS*TAPQGP
Trigger: GGGCCCCTGGGGAGCGGTGCAAGAGCCACTACGCCG...GCGGGTCAGACTCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGTGTGCAGAGAGCGGCGTAGTGGCTCTTaGACCGCTCCCCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LPPPASRRAGSLEDVCRERRSGS*TAPQGP
Trigger: GGGCCCCTGGGGAGCGGTGCAAGAGCCACTACGCCG...CTCTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp CAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCACGGCGTAGTGGCTCTTaGACCGCTCCCCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: QGVGVQGSGKRRWGQHSARRSGS*TAPQGP
Trigger: GGGCCCCTGGGGAGCGGTGCAAGAGCCACTACGCCG...TGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp AGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCCGGCGTAGTGGCTCTTaGACCGCTCCCCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SQGVGVQGSGKRRWGQHSRRSGS*TAPQGP
Trigger: GGGCCCCTGGGGAGCGGTGCAAGAGCCACTACGCCG...GCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp GCCGCACCCTGGGACGCCCTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTTCACTTGAGGATGTGTaGAGAGAGGGCCGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: AAPWDALPPPASRRAGSLSLEDV*REGRGR
Trigger: CCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGA...AAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAGGGCGTCCCAGGGTGCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp AGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCGCGAGTGTGGCGCTCTaGTTCCGGGCACGCCCACAG +
Preference number: 4 (lower is better)
Translates to: RAAEGPRGFSRVPRPGDFASVAL*FRARPQ
Trigger: CTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTCGC...GAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp AGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGGTCCTGAGCCCACTCTaGAGGTGGCCTGGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: RESESRDRGRGGGVSTAQVLSPL*RWPGPP
Trigger: CGGCGGGCCAGGCCACCTGCAGAGTGGGCTCAGGAC...CTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581774.5
CDS-3UTR CCA 90 bp GGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGGGTCGGGGAAGAGGCGGTaGGGTCAGCACAGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: GVGVQGSGKRRWGQHSAGSGKRR*GQHSAG
Trigger: CCCTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGA...CCCTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp CCTGGGACGCCCTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGGGGGTGGCACAGGGGTaGAGCAGAGCCACACATGGA +
Preference number: 4 (lower is better)
Translates to: PGTPCRHPRLAVRGHLRMGVAQG*SRATHG
Trigger: TCCATGTGTGGCTCTGCTCCACCCCTGTGCCACCCC...CATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAGGGCGTCCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp AGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTAGCTCACCTCCCAGCTaGAAGGCCTCGGGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: RGPRKVPEGSRGCPALVISSPPS*KASGGR
Trigger: CCTGCCGCCCGAGGCCTTCCAGCTGGGAGGTGAGCT...AATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339142.6
CDS-3UTR GCA 90 bp AGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGGCGAGTGTGGCGCTCTaGTTCCGGGCACGCCCACAG +
Preference number: 4 (lower is better)
Translates to: RESESRDRGRGGGVSTAQASVAL*FRARPQ
Trigger: CTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTCGC...CTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCGCGAGTGTGGCGCTCTaGTTCCGGGCACGCCCACAG +
Preference number: 4 (lower is better)
Translates to: AKARESESRDRGRGGGVSASVAL*FRARPQ
Trigger: CTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTCGC...GCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGGGGGGAGCCCATCTTCCTaGCGGGCCCTTTCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: GVGVQGSGKRRWGQHSAGGSPSS*RALSLP
Trigger: AGGCAGGGAAAGGGCCCGGCAGGAAGATGGGCTCCC...CCCTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354124.7
ENST00000578229.5
CDS-3UTR GCA 90 bp CGGGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCGGGAGCCCATCTTCCTaGCGGGCCCTCCGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: RGHLRMCAERAAEGPRGFGSPSS*RALRPA
Trigger: GGCGGGACGGAGGGCCCGGCAGGAAGATGGGCTCCC...GAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579760.6
CDS-3UTR CCA 90 bp CCCTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGTGTGCAGAGCGGTCGCCGGGTACATaGAGGTACCGGGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: PCRHPRLAVRGHLRMCAERSPGT*RYRGHS
Trigger: GCTGTGACCCCGGTACCTCCATGTACCCGGCGACCG...CTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CCA 90 bp AGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCGGACCCAGGGGTCCCTaGCCACTGTCAGGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: RAAEGPRGFSRVPRPGDFGPRGP*PLSGAL
Trigger: AAGGGCTCCTGACAGTGGCCAGGGACCCCTGGGTCC...GAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GCCGCACCCTGGGACGCCCTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGCAGAGCCACACATaGATGTACCAGGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: AAPWDALPPPASRRAGSLEQSHT*MYQELC
Trigger: GCAGAGCTCCTGGTACATCCATGTGTGGCTCTGCTC...AAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAGGGCGTCCCAGGGTGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp AGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCTCAGCCCTCTCGGCATaGTCCGGAGGCGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: SQGVGVQGSGKRRWGQHSSALSA*SGGDGS
Trigger: GCTGCCGTCGCCTCCGGACCATGCCGAGAGGGCTGA...GCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp AAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGAGCCCACTCTGCAGGTaGCCTGGCCCGCCGCCCACT +
Preference number: 4 (lower is better)
Translates to: KPGSRSPGIGEEAVGSAQSPLCR*PGPPPT
Trigger: AGTGGGCGGCGGGCCAGGCCACCTGCAGAGTGGGCT...CTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581774.5
CDS-3UTR TCA 90 bp AGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCGGCTCTGGCTTTGCATaGTGCTGCGGTCGCCCACCT +
Preference number: 4 (lower is better)
Translates to: RAAEGPRGFSRVPRPGDFGSGFA*CCGRPP
Trigger: AGGTGGGCGACCGCAGCATCATGCAAAGCCAGAGCC...GAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR TCA 90 bp GGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCAGGTGCCCCGCCCTGGTaGTTTCATCTGCCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: GPRKVPEGSRGCPALVISGAPPW*FHLPSA
Trigger: AGCTGACGGCAGATGAAATCACCAGGGCGGGGCACC...TGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR TCA 90 bp ATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCGGTGCCCCGCCCTGGTaGTTTCATCTGCCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: MCAERAAEGPRGFSRVPRGAPPW*FHLPSA
Trigger: AGCTGACGGCAGATGAAATCACCAGGGCGGGGCACC...GCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR TCA 90 bp GGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGGGCCGTGCGGGGTCACTTaGGGATGTGTGCAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GVGVQGSGKRRWGQHSAGPCGVT*GCVQRG
Trigger: CCCTCTCTGCACACATCCTCAAGTGACCCCGCACGG...CCCTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR TCA 90 bp CTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGTGTGCAGAGAGAACAAGGAGGCCGCATaGGCCGTCAGGCATCGGGCC +
Preference number: 4 (lower is better)
Translates to: LPPPASRRAGSLEDVCRENKEAA*AVRHRA
Trigger: GGCCCGATGCCTGACGGCTCATGCGGCCTCCTTGTT...CTCTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339142.6
CDS-3UTR GCA 90 bp CCTGGGACGCCCTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGGGGCGTCTCACTGAATaGCAAAGCCAGGGAGTCGGA +
Preference number: 4 (lower is better)
Translates to: PGTPCRHPRLAVRGHLRMGRLTE*QSQGVG
Trigger: TCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCC...CATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAGGGCGTCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp GGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCAGCTCTCTCCAGAGGCTaGGGGATCTGGGAGCACCGA +
Preference number: 4 (lower is better)
Translates to: GPRKVPEGSRGCPALVISALSRG*GIWEHR
Trigger: TCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAGAGC...TGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp CCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCGCGAGTGTGGCGCTCTaGTTCCGGGCACGCCCACAG +
Preference number: 4 (lower is better)
Translates to: PRGFSRVPRPGDFICRQLASVAL*FRARPQ
Trigger: CTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTCGC...GAGCTGACGGCAGATGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp AGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGGGAGCCCATCTTCCTaGCGGGCCCTGGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: SQGVGVQGSGKRRWGQHSGSPSS*RALVGK
Trigger: CTTTCCCACCAGGGCCCGGCAGGAAGATGGGCTCCC...GCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580474.1
CDS-3UTR CCA 90 bp AGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCAGCCCTTCTGCCCTTTaGGTCCAGTGTGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RAAEGPRGFSRVPRPGDFSPSAL*VQCGPW
Trigger: CCAGGGGCCACACTGGACCCAAAGGGCAGAAGGGCT...GAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CCA 90 bp CCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCATCGGGGAAGAGGCGGTaGGGTCAGCACAGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: PKPGSRSPGIGEEAVGSASGKRR*GQHSAG
Trigger: CCCTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGA...TGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp GAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTGGCCTTCGGGGCGCTTaGCCAGCCCAGCCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: ECQSQGVGVQGSGKRRWGGLRGA*PAQPPE
Trigger: CTCTGGAGGCTGGGCTGGCCAAGCGCCCCGAAGGCC...ACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339142.6
ENST00000581774.5
CDS-3UTR CCA 90 bp TGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGTCAGCCCTCTCGGCATaGTCCGGAGGCGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: CQSQGVGVQGSGKRRWGQSALSA*SGGDGS
Trigger: GCTGCCGTCGCCTCCGGACCATGCCGAGAGGGCTGA...CTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp CCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCATCAGCCCTCTCGGCATaGTCCGGAGGCGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: PKPGSRSPGIGEEAVGSASALSA*SGGDGS
Trigger: GCTGCCGTCGCCTCCGGACCATGCCGAGAGGGCTGA...TGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp AGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGTCCCTCCTCCCCGGTTaGCAGGTGCTGGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RESESRDRGRGGGVSTAQSLLPG*QVLERP
Trigger: AGGCCTCTCCAGCACCTGCCAACCGGGGAGGAGGGA...CTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392445.6
CDS-3UTR TCA 90 bp AGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGGCTCTGGCTTTGCATaGTGCTGCGGTCGCCCACCT +
Preference number: 4 (lower is better)
Translates to: SQGVGVQGSGKRRWGQHSGSGFA*CCGRPP
Trigger: AGGTGGGCGACCGCAGCATCATGCAAAGCCAGAGCC...GCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR TCA 90 bp AGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGGGCTCTGGCTTTGCATaGTGCTGCGGTCGCCCACCT +
Preference number: 4 (lower is better)
Translates to: RESESRDRGRGGGVSTAQGSGFA*CCGRPP
Trigger: AGGTGGGCGACCGCAGCATCATGCAAAGCCAGAGCC...CTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR TCA 90 bp CAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGGTGCCCCGCCCTGGTaGTTTCATCTGCCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: QGVGVQGSGKRRWGQHSAGAPPW*FHLPSA
Trigger: AGCTGACGGCAGATGAAATCACCAGGGCGGGGCACC...TGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR TCA 90 bp AGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGCCGTGCGGGGTCACTTaGGGATGTGTGCAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: RESESRDRGRGGGVSTAQPCGVT*GCVQRG
Trigger: CCCTCTCTGCACACATCCTCAAGTGACCCCGCACGG...CTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR TCA 90 bp AGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCCTCTGGTCTCAGGACTaGGGCTCACAGGAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RAAEGPRGFSRVPRPGDFLWSQD*GSQEPE
Trigger: CTCAGGCTCCTGTGAGCCTCAGTCCTGAGACCAGAG...GAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp GGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGGGGGCATCAACATGGGGTaGGGTGGAGAGGGGCTATGG +
Preference number: 4 (lower is better)
Translates to: GVGVQGSGKRRWGQHSAGGINMG*GGEGLW
Trigger: CCATAGCCCCTCTCCACCTCACCCCATGTTGATGCC...CCCTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp AGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTCCCATGGAGCCCTTCTaGCCTTTGGGTCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: RGPRKVPEGSRGCPALVIPMEPF*PLGPVW
Trigger: CCACACTGGACCCAAAGGGCAGAAGGGCTCCATGGG...AATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp GAGAGCACCGTGGAGACACCGCAACCCTGCTCCAGCTGGTCCTGCAATTGCCACCGGCGTAGTGGCTCTTaGACCGCTCCCCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: ESTVETPQPCSSWSCNCHRRSGS*TAPQGP
Trigger: GGGCCCCTGGGGAGCGGTGCAAGAGCCACTACGCCG...GTGGCAATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGTGCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGCGGCGTAGTGGCTCTTaGACCGCTCCCCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LTECQSQGVGVQGSGKRRRRSGS*TAPQGP
Trigger: GGGCCCCTGGGGAGCGGTGCAAGAGCCACTACGCCG...CCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp GGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGAGTCTGACCCGCCTGCGGTCGCCCACCTaGGCGAACAAGATCACCACC +
Preference number: 4 (lower is better)
Translates to: GALLPGTPTATRLQSLTRLRSPT*ANKITT
Trigger: GGTGGTGATCTTGTTCGCGCAGGTGGGCGACCGCAG...GCGGGTCAGACTCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCCTGCGGTCGCCCACCTaGGCGAACAAGATCACCACC +
Preference number: 4 (lower is better)
Translates to: AKARESESRDRGRGGGVSLRSPT*ANKITT
Trigger: GGTGGTGATCTTGTTCGCGCAGGTGGGCGACCGCAG...GCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp AGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCCTGCGGTCGCCCACCTaGGCGAACAAGATCACCACC +
Preference number: 4 (lower is better)
Translates to: SQGVGVQGSGKRRWGQHSLRSPT*ANKITT
Trigger: GGTGGTGATCTTGTTCGCGCAGGTGGGCGACCGCAG...GCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp CTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGTGTGCAGAGAGCTGCGGTCGCCCACCTaGGCGAACAAGATCACCACC +
Preference number: 4 (lower is better)
Translates to: LPPPASRRAGSLEDVCRELRSPT*ANKITT
Trigger: GGTGGTGATCTTGTTCGCGCAGGTGGGCGACCGCAG...CTCTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp CTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGTGTGCAGAGAGGAGGGTTCTCGCGGGTaGCCCGCCCTGGTGATTTCA +
Preference number: 4 (lower is better)
Translates to: LPPPASRRAGSLEDVCREEGSRG*PALVIS
Trigger: TGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTC...CTCTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp AGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCCAGGAGCCCTTCGGCTaGTTCTACCAACCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: RAAEGPRGFSRVPRPGDFQEPFG*FYQPGA
Trigger: GGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTG...GAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GGCGAGAGCACCGTGGAGACACCGCAACCCTGCTCCAGCTGGTCCTGCAATTGCGCGAGTGTGGCGCTCTaGTTCCGGGCACGCCCACAG +
Preference number: 4 (lower is better)
Translates to: GESTVETPQPCSSWSCNCASVAL*FRARPQ
Trigger: CTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTCGC...GCAATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGTGCTCTCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GCAGCGAGTGTGGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGAGGGAGCCCATCTTCCTaGCGGGCCCTGGAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: AASVALCFRARPQQLGFRGSPSS*RALERR
Trigger: TCTTCGCTCCAGGGCCCGGCAGGAAGATGGGCTCCC...TCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTCGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339142.6
CDS-3UTR GCA 90 bp GGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGAGTCTGACCCGCAAGCACAATGCCCACTaGCTTGCCCCAGGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: GALLPGTPTATRLQSLTRKHNAH*LAPGWA
Trigger: CGCCCAGCCTGGGGCAAGGCAGTGGGCATTGTGCTT...GCGGGTCAGACTCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354124.7
CDS-3UTR GCA 90 bp CCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCAGGGTGCAAGCACAATaGCCACTGCCTTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PPASRRAGSLEDVCREGRRVQAQ*PLPCPR
Trigger: CCTGGGGCAAGGCAGTGGGCATTGTGCTTGCACCCT...GCGGCCCTCTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354124.7
CDS-3UTR GCA 90 bp TCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGAGCCCATCTTCCTaGCGGGCCCTCCGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: SLNAKARESESRDRGRGGGSPSS*RALRPA
Trigger: GGCGGGACGGAGGGCCCGGCAGGAAGATGGGCTCCC...ACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579760.6
ENST00000580454.5
CDS-3UTR CCA 90 bp CCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCCGGTCGCCGGGTACATaGAGGTACCGGGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: PRGFSRVPRPGDFICRQLRSPGT*RYRGHS
Trigger: GCTGTGACCCCGGTACCTCCATGTACCCGGCGACCG...GAGCTGACGGCAGATGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CCA 90 bp TGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCGGTCGCCGGGTACATaGAGGTACCGGGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: CQSQGVGVQGSGKRRWGQRSPGT*RYRGHS
Trigger: GCTGTGACCCCGGTACCTCCATGTACCCGGCGACCG...CTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp ATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCATAGTGATGTTGATCTaGGGCACGGCGGTCGCCGGG +
Preference number: 4 (lower is better)
Translates to: MCAERAAEGPRGFSRVPRIVMLI*GTAVAG
Trigger: CCCGGCGACCGCCGTGCCCCAGATCAACATCACTAT...GCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CCA 90 bp GGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGGGATAGTGATGTTGATCTaGGGCACGGCGGTCGCCGGG +
Preference number: 4 (lower is better)
Translates to: GVGVQGSGKRRWGQHSAGIVMLI*GTAVAG
Trigger: CCCGGCGACCGCCGTGCCCCAGATCAACATCACTAT...CCCTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp AGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGAGCCCTTCTGCCCTTTaGGTCCAGTGTGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RESESRDRGRGGGVSTAQSPSAL*VQCGPW
Trigger: CCAGGGGCCACACTGGACCCAAAGGGCAGAAGGGCT...CTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp AGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTAGTGGTTGCTGTGCATaGGCTTCTTCCGGCCCACCG +
Preference number: 4 (lower is better)
Translates to: RGPRKVPEGSRGCPALVISGCCA*ASSGPP
Trigger: CGGTGGGCCGGAAGAAGCCCATGCACAGCAACCACT...AATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CCA 90 bp GCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCAGGCGTACCCACACCTaGTCCTGCTCTCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AKARESESRDRGRGGGVSRRTHT*SCSRSS
Trigger: GGAGCTGCGAGAGCAGGACCAGGTGTGGGTACGCCT...GCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp AGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGAGGCGTACCCACACCTaGTCCTGCTCTCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RESESRDRGRGGGVSTAQRRTHT*SCSRSS
Trigger: GGAGCTGCGAGAGCAGGACCAGGTGTGGGTACGCCT...CTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp TTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGTCGGGGAAGAGGCGGTaGGGTCAGCACAGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: LRMCAERAAEGPRGFSRVSGKRR*GQHSAG
Trigger: CCCTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGA...CACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CCA 90 bp AGCGGGGGTTTGGGGGCCCAGCGGGTAGCAAGAGTGACCCTGGGCATCAACATGTCGGGGAAGAGGCGGTaGGGTCAGCACAGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: SGGLGAQRVARVTLGINMSGKRR*GQHSAG
Trigger: CCCTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGA...CATGTTGATGCCCAGGGTCACTCTTGCTACCCGCTGGGCCCCCAAACCCCCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GTGCCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGATCGGGGAAGAGGCGGTaGGGTCAGCACAGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: VPRPGDFICRQLSPEAAGSGKRR*GQHSAG
Trigger: CCCTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGA...TCCCGCAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CCA 90 bp CCAGCGGGTAGCAAGAGTGACCCTGGGCATCAACATGGGGTGAGGTGGAGAGGGTGGGAGGCTGACGCCTaGGGCCCCAGCCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: PAGSKSDPGHQHGVRWRGWEADA*GPSPHH
Trigger: GTGATGGGGGCTGGGGCCCCAGGCGTCAGCCTCCCA...CCCTCTCCACCTCACCCCATGTTGATGCCCAGGGTCACTCTTGCTACCCGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp CGCGGGTGCCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGGGACCCAGGGGTCCCTaGCCACTGTCAGGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: RGCPALVISSAVSSLQRLGPRGP*PLSGAL
Trigger: AAGGGCTCCTGACAGTGGCCAGGGACCCCTGGGTCC...CAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCACCCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp AGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCAGGGCGAGAGCACCGTaGAGACACCGCAACCCTGCT +
Preference number: 4 (lower is better)
Translates to: SQGVGVQGSGKRRWGQHSRARAP*RHRNPA
Trigger: AGCAGGGTTGCGGTGTCTCCACGGTGCTCTCGCCCT...GCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGGGCTTAAGCAGCGAGTGTaGCGCTCTGCTTCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: GVGVQGSGKRRWGQHSAGLKQRV*RSASGH
Trigger: GTGCCCGGAAGCAGAGCGCCACACTCGCTGCTTAAG...CCCTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GCCGCACCCTGGGACGCCCTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTTTTTCTGGAAAGAGCTaGGGGAGCTTAAGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: AAPWDALPPPASRRAGSLFSGKS*GSLSSE
Trigger: CTCGCTGCTTAAGCTCCCCCAGCTCTTTCCAGAAAA...AAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAGGGCGTCCCAGGGTGCGGC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp CCAGCGGGTAGCAAGAGTGACCCTGGGCATCAACATGGGGTGAGGTGGAGAGGGGGCCTTCGGGGCGCTTaGCCAGCCCAGCCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PAGSKSDPGHQHGVRWRGGLRGA*PAQPPE
Trigger: CTCTGGAGGCTGGGCTGGCCAAGCGCCCCGAAGGCC...CCCTCTCCACCTCACCCCATGTTGATGCCCAGGGTCACTCTTGCTACCCGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339142.6
CDS-3UTR CCA 90 bp CTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGTGTGCAGAGAGCTTCCTGCCGGGCCCTaGAGCGAAGAGTGGGACTCA +
Preference number: 4 (lower is better)
Translates to: LPPPASRRAGSLEDVCRELPAGP*SEEWDS
Trigger: TGAGTCCCACTCTTCGCTCCAGGGCCCGGCAGGAAG...CTCTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339142.6
CDS-3UTR CCA 90 bp TGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGGGCCCTTTCCCTGCCTaGAGTGTCCTCCCATCCGCC +
Preference number: 4 (lower is better)
Translates to: CQSQGVGVQGSGKRRWGQGPFPA*SVLPSA
Trigger: GGCGGATGGGAGGACACTCCAGGCAGGGAAAGGGCC...CTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354124.7
ENST00000578229.5
CDS-3UTR TCA 90 bp GGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCAGGGAGCCCCTGGTCCTaGCTGGGCCTGTATTTTTCA +
Preference number: 4 (lower is better)
Translates to: GPRKVPEGSRGCPALVISGSPWS*LGLYFS
Trigger: TGAAAAATACAGGCCCAGTCAGGACCAGGGGCTCCC...TGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR TCA 90 bp ATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCTGCAGGGCGTCTCACTaGATGCCAAAGCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: MCAERAAEGPRGFSRVPRCRASH*MPKPGS
Trigger: ACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCA...GCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR TCA 90 bp GGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCAAGGCTCACAGGAGCCTaGGAAACAGACAAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: GPRKVPEGSRGCPALVISRLTGA*ETDKRE
Trigger: CTCCCGCTTGTCTGTTTCTCAGGCTCCTGTGAGCCT...TGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp CCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCAGGCTCACAGGAGCCTaGGAAACAGACAAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: PPASRRAGSLEDVCREGRRLTGA*ETDKRE
Trigger: CTCCCGCTTGTCTGTTTCTCAGGCTCCTGTGAGCCT...GCGGCCCTCTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp GCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACTCCACAGAGGCCCTaGCTGCATGCGTCAACCCCT +
Preference number: 4 (lower is better)
Translates to: AKARESESRDRGRGGGVSTPQRP*LHASTP
Trigger: AGGGGTTGACGCATGCAGTCAGGGCCTCTGTGGAGT...GCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578229.5
CDS-3UTR GCA 90 bp AGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCCCAGGTCCGGGGCGATaGACAGACTCGGTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: SQGVGVQGSGKRRWGQHSPGPGR*TDSVKE
Trigger: TTCCTTCACCGAGTCTGTGCATCGCCCCGGACCTGG...GCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000579760.6
ENST00000580454.5
CDS-3UTR GCA 90 bp GCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCCCCATGGAGCCCTTCTaGCCTTTGGGTCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: AKARESESRDRGRGGGVSPMEPF*PLGPVW
Trigger: CCACACTGGACCCAAAGGGCAGAAGGGCTCCATGGG...GCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp GCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACCCACACCTGGTCCTaGTCTCGCAGCTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: AKARESESRDRGRGGGVSTHTWS*SRSSSI
Trigger: GATGCTGGAGCTGCGAGAGCAGGACCAGGTGTGGGT...GCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp AGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCACCCACACCTGGTCCTaGTCTCGCAGCTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: SQGVGVQGSGKRRWGQHSTHTWS*SRSSSI
Trigger: GATGCTGGAGCTGCGAGAGCAGGACCAGGTGTGGGT...GCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp GCAGCGAGTGTGGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGAGAGGGTTCTCGCGGGTaGCCCGCCCTGGTGATTTCA +
Preference number: 4 (lower is better)
Translates to: AASVALCFRARPQQLGFREGSRG*PALVIS
Trigger: TGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTC...TCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTCGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp TGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGGAGGGTTCTCGCGGGTaGCCCGCCCTGGTGATTTCA +
Preference number: 4 (lower is better)
Translates to: CQSQGVGVQGSGKRRWGQEGSRG*PALVIS
Trigger: TGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTC...CTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp AGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCCCTCATAGAAACATCTaGAGGCCTGGGGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: RAAEGPRGFSRVPRPGDFPHRNI*RPGGPR
Trigger: CCTGGGTCCCCCAGGCCTGCAGATGTTTCTATGAGG...GAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGGCACAGAAAGCCGATaGCAGGGTGGCAGGCATGGA +
Preference number: 4 (lower is better)
Translates to: QGVGVQGSGKRRWGQHSAGTESR*QGGRHG
Trigger: TCCATGCCTGCCACCCTGGCATCGGCTTTCTGTGCC...TGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp AAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGAAGCACAATGCCCACTaGCTTGCCCCAGGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: KPGSRSPGIGEEAVGSAQKHNAH*LAPGWA
Trigger: CGCCCAGCCTGGGGCAAGGCAGTGGGCATTGTGCTT...CTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354124.7
ENST00000578229.5
CDS-3UTR GCA 90 bp CAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGAGGCCCTGACTGCATaGGTCAACCCCTCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: QGVGVQGSGKRRWGQHSAEALTA*VNPSCE
Trigger: CTCACAGGAGGGGTTGACGCATGCAGTCAGGGCCTC...TGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578229.5
CDS-3UTR GCA 90 bp AAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCTCGGGCGGCAGGCTTaGCCCTGCTTTGAGAACCGT +
Preference number: 4 (lower is better)
Translates to: KPGSRSPGIGEEAVGSAQLGRQA*PCFENR
Trigger: ACGGTTCTCAAAGCAGGGGCAAGCCTGCCGCCCGAG...CTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581774.5
CDS-3UTR CCA 90 bp CTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGCGGTCGCCGGGTACATaGAGGTACCGGGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: LNAKARESESRDRGRGGGRSPGT*RYRGHS
Trigger: GCTGTGACCCCGGTACCTCCATGTACCCGGCGACCG...CCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp GCGGGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCGGTCGCCGGGTACATaGAGGTACCGGGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: AGSLEDVCREGRGRSQRVRSPGT*RYRGHS
Trigger: GCTGTGACCCCGGTACCTCCATGTACCCGGCGACCG...AACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CCA 90 bp CAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAATAGTGATGTTGATCTaGGGCACGGCGGTCGCCGGG +
Preference number: 4 (lower is better)
Translates to: QGVGVQGSGKRRWGQHSAIVMLI*GTAVAG
Trigger: CCCGGCGACCGCCGTGCCCCAGATCAACATCACTAT...TGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp AGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGATAGTGATGTTGATCTaGGGCACGGCGGTCGCCGGG +
Preference number: 4 (lower is better)
Translates to: RESESRDRGRGGGVSTAQIVMLI*GTAVAG
Trigger: CCCGGCGACCGCCGTGCCCCAGATCAACATCACTAT...CTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp CCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCAGCCCTTCTGCCCTTTaGGTCCAGTGTGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PRGFSRVPRPGDFICRQLSPSAL*VQCGPW
Trigger: CCAGGGGCCACACTGGACCCAAAGGGCAGAAGGGCT...GAGCTGACGGCAGATGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CCA 90 bp CTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGTGTGCAGAGAGAGAGGCTGCGGGATCTaGGAGCACCGATCGCTTTGG +
Preference number: 4 (lower is better)
Translates to: LPPPASRRAGSLEDVCRERGCGI*EHRSLW
Trigger: CCAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCT...CTCTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CCA 90 bp AGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCAGAGGCTGCGGGATCTaGGAGCACCGATCGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SQGVGVQGSGKRRWGQHSRGCGI*EHRSLW
Trigger: CCAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCT...GCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CCA 90 bp GGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCAATTATTTCCAAGGACTaGAGCCGCGGTGCCGCACCC +
Preference number: 4 (lower is better)
Translates to: GPRKVPEGSRGCPALVISIISKD*SRGAAP
Trigger: GGGTGCGGCACCGCGGCTCCAGTCCTTGGAAATAAT...TGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CCA 90 bp GGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGGGAAAAGGCCTCTCTCTTaGGAGCCAGCAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GVGVQGSGKRRWGQHSAGKRPLS*EPAGWL
Trigger: CAGCCAGCCTGCTGGCTCCCAAGAGAGAGGCCTTTT...CCCTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp TGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGGGGGTGGCACAGGGGTaGAGCAGAGCCACACATGGA +
Preference number: 4 (lower is better)
Translates to: CQSQGVGVQGSGKRRWGQGVAQG*SRATHG
Trigger: TCCATGTGTGGCTCTGCTCCACCCCTGTGCCACCCC...CTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp AAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGAAGCCGATGCCAGGGTaGCAGGCATGGAGACCACCC +
Preference number: 4 (lower is better)
Translates to: KPGSRSPGIGEEAVGSAQKPMPG*QAWRPP
Trigger: GGGTGGTCTCCATGCCTGCCACCCTGGCATCGGCTT...CTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp AAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGAGGGCGAGAGCACCGTaGAGACACCGCAACCCTGCT +
Preference number: 4 (lower is better)
Translates to: KPGSRSPGIGEEAVGSAQRARAP*RHRNPA
Trigger: AGCAGGGTTGCGGTGTCTCCACGGTGCTCTCGCCCT...CTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp CGCGGGTGCCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGAGGGCGAGAGCACCGTaGAGACACCGCAACCCTGCT +
Preference number: 4 (lower is better)
Translates to: RGCPALVISSAVSSLQRLRARAP*RHRNPA
Trigger: AGCAGGGTTGCGGTGTCTCCACGGTGCTCTCGCCCT...CAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCACCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp CCCTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGTGTGCAGAGGGGCTATGGGGTTCCTaGAGATCAGAGTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: PCRHPRLAVRGHLRMCAEGLWGS*RSESGV
Trigger: CACCCCAGACTCTGATCTCCAGGAACCCCATAGCCC...CTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp AAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCCCTGGGCATCAACATaGGGTGAGGTGGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: KPGSRSPGIGEEAVGSAQPWAST*GEVERG
Trigger: GCCCCTCTCCACCTCACCCCATGTTGATGCCCAGGG...CTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp AGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCCTTAAGCAGCGAGTGTaGCGCTCTGCTTCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: SQGVGVQGSGKRRWGQHSLKQRV*RSASGH
Trigger: GTGCCCGGAAGCAGAGCGCCACACTCGCTGCTTAAG...GCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGCTCACCTCCCAGCTaGAAGGCCTCGGGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: GRLTECQSQGVGVQGSGKSSPPS*KASGGR
Trigger: CCTGCCGCCCGAGGCCTTCCAGCTGGGAGGTGAGCT...CTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339142.6
ENST00000581774.5
CDS-3UTR CCA 90 bp AGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCTCCTGCTGTTCCCCCTaGACATGGGGCACACGACTC +
Preference number: 4 (lower is better)
Translates to: SQGVGVQGSGKRRWGQHSSCCSP*TWGTRL
Trigger: GAGTCGTGTGCCCCATGTCCAGGGGGAACAGCAGGA...GCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp CAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCATCCTGCTGTTCCCCCTaGACATGGGGCACACGACTC +
Preference number: 4 (lower is better)
Translates to: QGVGVQGSGKRRWGQHSASCCSP*TWGTRL
Trigger: GAGTCGTGTGCCCCATGTCCAGGGGGAACAGCAGGA...TGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp TCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGATCTGGGAGCACCGATCGCTTTGTCAGCCCTCTCGGCATaGTCCGGAGGCGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: SAVSSLQRLRDLGAPIALSALSA*SGGDGS
Trigger: GCTGCCGTCGCCTCCGGACCATGCCGAGAGGGCTGA...CAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAGAGCTGACGGCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CCA 90 bp GAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTGGCCCTTTCCCTGCCTaGAGTGTCCTCCCATCCGCC +
Preference number: 4 (lower is better)
Translates to: ECQSQGVGVQGSGKRRWGGPFPA*SVLPSA
Trigger: GGCGGATGGGAGGACACTCCAGGCAGGGAAAGGGCC...ACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354124.7
ENST00000578229.5
CDS-3UTR CCA 90 bp ATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCACCGGTTGGCAGGTGCTaGAGAGGCCTCCTGGAGCAC +
Preference number: 4 (lower is better)
Translates to: MPKPGSRSPGIGEEAVGSPVGRC*RGLLEH
Trigger: GTGCTCCAGGAGGCCTCTCCAGCACCTGCCAACCGG...TGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392445.6
CDS-3UTR CCA 90 bp CAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCACCTGCCGGGCCCTGGTaGGAAAGAAACACACAGGGA +
Preference number: 4 (lower is better)
Translates to: QGVGVQGSGKRRWGQHSAPAGPW*ERNTQG
Trigger: TCCCTGTGTGTTTCTTTCCCACCAGGGCCCGGCAGG...TGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580474.1
CDS-3UTR TCA 90 bp CTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGGCTCTGGCTTTGCATaGTGCTGCGGTCGCCCACCT +
Preference number: 4 (lower is better)
Translates to: LNAKARESESRDRGRGGGGSGFA*CCGRPP
Trigger: AGGTGGGCGACCGCAGCATCATGCAAAGCCAGAGCC...CCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR TCA 90 bp GAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTGGTGCCCCGCCCTGGTaGTTTCATCTGCCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: ECQSQGVGVQGSGKRRWGGAPPW*FHLPSA
Trigger: AGCTGACGGCAGATGAAATCACCAGGGCGGGGCACC...ACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR TCA 90 bp GGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGGGGGCCTTCTGGGGCTaGTTTGTGTGGGAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: GRLTECQSQGVGVQGSGKGAFWG*FVWEAA
Trigger: TGCCGCCTCCCACACAAATCAGCCCCAGAAGGCCCC...CTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp CCGTCAGCTCTCTCCAGAGGCTGCGGGATCTGGGAGCACCGATCGCTTTGGCTTGGGGCCTTCTGGGGCTaGTTTGTGTGGGAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: PSALSRGCGIWEHRSLWLGAFWG*FVWEAA
Trigger: TGCCGCCTCCCACACAAATCAGCCCCAGAAGGCCCC...AAGCCAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAGAGCTGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp CGCGGGTGCCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGGGCATCAACATGGGGTaGGGTGGAGAGGGGCTATGG +
Preference number: 4 (lower is better)
Translates to: RGCPALVISSAVSSLQRLGINMG*GGEGLW
Trigger: CCATAGCCCCTCTCCACCTCACCCCATGTTGATGCC...CAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCACCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACCCATGGAGCCCTTCTaGCCTTTGGGTCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: PKPGSRSPGIGEEAVGSAPMEPF*PLGPVW
Trigger: CCACACTGGACCCAAAGGGCAGAAGGGCTCCATGGG...TGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp CGGGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCCTGCGGTCGCCCACCTaGGCGAACAAGATCACCACC +
Preference number: 4 (lower is better)
Translates to: RGHLRMCAERAAEGPRGFLRSPT*ANKITT
Trigger: GGTGGTGATCTTGTTCGCGCAGGTGGGCGACCGCAG...GAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp TGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGACCCACACCTGGTCCTaGTCTCGCAGCTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: CQSQGVGVQGSGKRRWGQTHTWS*SRSSSI
Trigger: GATGCTGGAGCTGCGAGAGCAGGACCAGGTGTGGGT...CTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp CAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGGGCGTCTCACTGAATaGCAAAGCCAGGGAGTCGGA +
Preference number: 4 (lower is better)
Translates to: QGVGVQGSGKRRWGQHSAGRLTE*QSQGVG
Trigger: TCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCC...TGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp AGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGGGGCGTCTCACTGAATaGCAAAGCCAGGGAGTCGGA +
Preference number: 4 (lower is better)
Translates to: RESESRDRGRGGGVSTAQGRLTE*QSQGVG
Trigger: TCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCC...CTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp CAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCATCACTTGAGGATGTGTaGAGAGAGGGCCGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: QGVGVQGSGKRRWGQHSASLEDV*REGRGR
Trigger: CCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGA...TGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp TGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGGGCACAGAAAGCCGATaGCAGGGTGGCAGGCATGGA +
Preference number: 4 (lower is better)
Translates to: CQSQGVGVQGSGKRRWGQGTESR*QGGRHG
Trigger: TCCATGCCTGCCACCCTGGCATCGGCTTTCTGTGCC...CTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GCAGCGAGTGTGGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGAGGCACAGAAAGCCGATaGCAGGGTGGCAGGCATGGA +
Preference number: 4 (lower is better)
Translates to: AASVALCFRARPQQLGFRGTESR*QGGRHG
Trigger: TCCATGCCTGCCACCCTGGCATCGGCTTTCTGTGCC...TCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTCGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp AGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGGCTATTGCCTCTCCTaGCACCCAGCTCCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: SQGVGVQGSGKRRWGQHSGYCLS*HPAPES
Trigger: ACTCTCAGGAGCTGGGTGGCAGGAGAGGCAATAGCC...GCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCATGCCACAGGGGCTATTaGCTCTCCTGCCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: PKPGSRSPGIGEEAVGSACHRGY*LSCHPA
Trigger: AGCTGGGTGGCAGGAGAGGCAATAGCCCCTGTGGCA...TGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCTGCTCCAGCTGGTCCTaGAATTGCCACAGGGGCTAT +
Preference number: 4 (lower is better)
Translates to: PPASRRAGSLEDVCREGRCSSWS*NCHRGY
Trigger: ATAGCCCCTGTGGCAATTGCAGGACCAGCTGGAGCA...GCGGCCCTCTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCGAGACACCGCAACCCTaGTCCAGCTGGTCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: EDVCREGRGRSQRVLAGAETPQP*SSWSCN
Trigger: ATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTC...GGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp AGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGAGACACCGCAACCCTaGTCCAGCTGGTCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: SQGVGVQGSGKRRWGQHSETPQP*SSWSCN
Trigger: ATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTC...GCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GCCGCACCCTGGGACGCCCTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTGATGGTGATGATGATTaGCACTGTTGTTGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: AAPWDALPPPASRRAGSLDGDDD*HCCCWV
Trigger: CACCCAACAACAACAGTGGCAATCATCATCACCATC...AAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAGGGCGTCCCAGGGTGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392445.6
CDS-3UTR GCA 90 bp CAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCACGGCAGGCTTGCCCCTaGTTTGAGAACCGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: QGVGVQGSGKRRWGQHSARQACP*FENRVR
Trigger: TCTCACACGGTTCTCAAAGCAGGGGCAAGCCTGCCG...TGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581774.5
CDS-3UTR CCA 90 bp CCTGGGACGCCCTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGGCCCCTGGTCCTGACTaGGCCTGTATTTTTCATGTT +
Preference number: 4 (lower is better)
Translates to: PGTPCRHPRLAVRGHLRMAPGPD*ACIFHV
Trigger: AACATGAAAAATACAGGCCCAGTCAGGACCAGGGGC...CATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAGGGCGTCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CCA 90 bp CCAGCGGGTAGCAAGAGTGACCCTGGGCATCAACATGGGGTGAGGTGGAGAGGGCGGTCGCCGGGTACATaGAGGTACCGGGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: PAGSKSDPGHQHGVRWRGRSPGT*RYRGHS
Trigger: GCTGTGACCCCGGTACCTCCATGTACCCGGCGACCG...CCCTCTCCACCTCACCCCATGTTGATGCCCAGGGTCACTCTTGCTACCCGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp CCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCAATAGTGATGTTGATCTaGGGCACGGCGGTCGCCGGG +
Preference number: 4 (lower is better)
Translates to: PKPGSRSPGIGEEAVGSAIVMLI*GTAVAG
Trigger: CCCGGCGACCGCCGTGCCCCAGATCAACATCACTAT...TGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp AGCGGGGGTTTGGGGGCCCAGCGGGTAGCAAGAGTGACCCTGGGCATCAACATGAGCCCTTCTGCCCTTTaGGTCCAGTGTGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SGGLGAQRVARVTLGINMSPSAL*VQCGPW
Trigger: CCAGGGGCCACACTGGACCCAAAGGGCAGAAGGGCT...CATGTTGATGCCCAGGGTCACTCTTGCTACCCGCTGGGCCCCCAAACCCCCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp CCCTGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCAGGCGTACCCACACCTaGTCCTGCTCTCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PWPLSGALRLLLPTWSQGRRTHT*SCSRSS
Trigger: GGAGCTGCGAGAGCAGGACCAGGTGTGGGTACGCCT...GCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp ATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAAGGCGTACCCACACCTaGTCCTGCTCTCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: MPKPGSRSPGIGEEAVGSRRTHT*SCSRSS
Trigger: GGAGCTGCGAGAGCAGGACCAGGTGTGGGTACGCCT...TGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp CCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCAGAGGCTGCGGGATCTaGGAGCACCGATCGCTTTGG +
Preference number: 4 (lower is better)
Translates to: PRGFSRVPRPGDFICRQLRGCGI*EHRSLW
Trigger: CCAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCT...GAGCTGACGGCAGATGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CCA 90 bp CGCGGGTGCCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGAGAGGCTGCGGGATCTaGGAGCACCGATCGCTTTGG +
Preference number: 4 (lower is better)
Translates to: RGCPALVISSAVSSLQRLRGCGI*EHRSLW
Trigger: CCAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCT...CAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCACCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CCA 90 bp CAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAATTATTTCCAAGGACTaGAGCCGCGGTGCCGCACCC +
Preference number: 4 (lower is better)
Translates to: QGVGVQGSGKRRWGQHSAIISKD*SRGAAP
Trigger: GGGTGCGGCACCGCGGCTCCAGTCCTTGGAAATAAT...TGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CCA 90 bp AGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGATTATTTCCAAGGACTaGAGCCGCGGTGCCGCACCC +
Preference number: 4 (lower is better)
Translates to: RESESRDRGRGGGVSTAQIISKD*SRGAAP
Trigger: GGGTGCGGCACCGCGGCTCCAGTCCTTGGAAATAAT...CTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CCA 90 bp AGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCAAAAGGCCTCTCTCTTaGGAGCCAGCAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SQGVGVQGSGKRRWGQHSKRPLS*EPAGWL
Trigger: CAGCCAGCCTGCTGGCTCCCAAGAGAGAGGCCTTTT...GCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp CTCTCCAGAGGCTGCGGGATCTGGGAGCACCGATCGCTTTGGCTTTCTGTGTGTTGGGAGGCTGACGCCTaGGGCCCCAGCCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: LSRGCGIWEHRSLWLSVCWEADA*GPSPHH
Trigger: GTGATGGGGGCTGGGGCCCCAGGCGTCAGCCTCCCA...ACACACAGAAAGCCAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp AGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCGAGCAGAGCCACACATaGATGTACCAGGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RAAEGPRGFSRVPRPGDFEQSHT*MYQELC
Trigger: GCAGAGCTCCTGGTACATCCATGTGTGGCTCTGCTC...GAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp ATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGGGGTGGCACAGGGGTaGAGCAGAGCCACACATGGA +
Preference number: 4 (lower is better)
Translates to: MPKPGSRSPGIGEEAVGSGVAQG*SRATHG
Trigger: TCCATGTGTGGCTCTGCTCCACCCCTGTGCCACCCC...TGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp TTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGGGGGTGGCACAGGGGTaGAGCAGAGCCACACATGGA +
Preference number: 4 (lower is better)
Translates to: LRMCAERAAEGPRGFSRVGVAQG*SRATHG
Trigger: TCCATGTGTGGCTCTGCTCCACCCCTGTGCCACCCC...CACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp TTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGAAGCCGATGCCAGGGTaGCAGGCATGGAGACCACCC +
Preference number: 4 (lower is better)
Translates to: LRMCAERAAEGPRGFSRVKPMPG*QAWRPP
Trigger: GGGTGGTCTCCATGCCTGCCACCCTGGCATCGGCTT...CACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp CTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGCCCTGGGCATCAACATaGGGTGAGGTGGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LNAKARESESRDRGRGGGPWAST*GEVERG
Trigger: GCCCCTCTCCACCTCACCCCATGTTGATGCCCAGGG...CCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GCAGCGAGTGTGGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGATCCTGCTGTTCCCCCTaGACATGGGGCACACGACTC +
Preference number: 4 (lower is better)
Translates to: AASVALCFRARPQQLGFRSCCSP*TWGTRL
Trigger: GAGTCGTGTGCCCCATGTCCAGGGGGAACAGCAGGA...TCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTCGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp TGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGTCCTGCTGTTCCCCCTaGACATGGGGCACACGACTC +
Preference number: 4 (lower is better)
Translates to: CQSQGVGVQGSGKRRWGQSCCSP*TWGTRL
Trigger: GAGTCGTGTGCCCCATGTCCAGGGGGAACAGCAGGA...CTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp TGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGTCAGCCCTCTCGGCATaGTCCGGAGGCGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: CAGRLTECQSQGVGVQGSSALSA*SGGDGS
Trigger: GCTGCCGTCGCCTCCGGACCATGCCGAGAGGGCTGA...CGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp AGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCCTTCCTGCCGGGCCCTaGTGGGAAAGAAACACACAG +
Preference number: 4 (lower is better)
Translates to: SQGVGVQGSGKRRWGQHSLPAGP*WERNTQ
Trigger: CTGTGTGTTTCTTTCCCACCAGGGCCCGGCAGGAAG...GCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580474.1
CDS-3UTR TCA 90 bp AAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGGGGAGCCCCTGGTCCTaGCTGGGCCTGTATTTTTCA +
Preference number: 4 (lower is better)
Translates to: KPGSRSPGIGEEAVGSAQGSPWS*LGLYFS
Trigger: TGAAAAATACAGGCCCAGTCAGGACCAGGGGCTCCC...CTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR TCA 90 bp AGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCTGTCCAGCTCCTCGCTaGAGATGGCGTTCTCACGTT +
Preference number: 4 (lower is better)
Translates to: SQGVGVQGSGKRRWGQHSCPAPR*RWRSHV
Trigger: AACGTGAGAACGCCATCTTCAGCGAGGAGCTGGACA...GCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR TCA 90 bp AAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGTGCAGGGCGTCTCACTaGATGCCAAAGCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: KPGSRSPGIGEEAVGSAQCRASH*MPKPGS
Trigger: ACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCA...CTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR TCA 90 bp GGGCTGATTTGTGTGGGAGGCGGCACAGAAAGCCGATGCCAGGGTGGCAGGCATGGTGCCCCGCCCTGGTaGTTTCATCTGCCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: GLICVGGGTESRCQGGRHGAPPW*FHLPSA
Trigger: AGCTGACGGCAGATGAAATCACCAGGGCGGGGCACC...ATGCCTGCCACCCTGGCATCGGCTTTCTGTGCCGCCTCCCACACAAATCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp CCGTCAGCTCTCTCCAGAGGCTGCGGGATCTGGGAGCACCGATCGCTTTGGCTTCCGTGCGGGGTCACTTaGGGATGTGTGCAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PSALSRGCGIWEHRSLWLPCGVT*GCVQRG
Trigger: CCCTCTCTGCACACATCCTCAAGTGACCCCGCACGG...AAGCCAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAGAGCTGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR TCA 90 bp GCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGATCTGGGAGGGGCCTTCTGGGGCTaGTTTGTGTGGGAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: ALVISSAVSSLQRLRDLGGAFWG*FVWEAA
Trigger: TGCCGCCTCCCACACAAATCAGCCCCAGAAGGCCCC...TCCCAGATCCCGCAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp CGGGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCCACACGTGGAAGCGGTaGTGCTTAGCCCACGAGGAG +
Preference number: 4 (lower is better)
Translates to: RGHLRMCAERAAEGPRGFHTWKR*CLAHEE
Trigger: CTCCTCGTGGGCTAAGCATCACCGCTTCCACGTGTG...GAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp CCCTGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCCACACGTGGAAGCGGTaGTGCTTAGCCCACGAGGAG +
Preference number: 4 (lower is better)
Translates to: PWPLSGALRLLLPTWSQGHTWKR*CLAHEE
Trigger: CTCCTCGTGGGCTAAGCATCACCGCTTCCACGTGTG...GCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp ATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCACACACGTGGAAGCGGTaGTGCTTAGCCCACGAGGAG +
Preference number: 4 (lower is better)
Translates to: MPKPGSRSPGIGEEAVGSHTWKR*CLAHEE
Trigger: CTCCTCGTGGGCTAAGCATCACCGCTTCCACGTGTG...TGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp TGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGAGGCTCACAGGAGCCTaGGAAACAGACAAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: CQSQGVGVQGSGKRRWGQRLTGA*ETDKRE
Trigger: CTCCCGCTTGTCTGTTTCTCAGGCTCCTGTGAGCCT...CTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp GGCGAGAGCACCGTGGAGACACCGCAACCCTGCTCCAGCTGGTCCTGCAATTGCCTCTGGTCTCAGGACTaGGGCTCACAGGAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GESTVETPQPCSSWSCNCLWSQD*GSQEPE
Trigger: CTCAGGCTCCTGTGAGCCTCAGTCCTGAGACCAGAG...GCAATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGTGCTCTCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp GGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGGGGCTTTGAGAACCGTGTaGGAGAGAAGAGGCACCAAC +
Preference number: 4 (lower is better)
Translates to: GVGVQGSGKRRWGQHSAGALRTV*ERRGTN
Trigger: GTTGGTGCCTCTTCTCTCTCACACGGTTCTCAAAGC...CCCTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581774.5
CDS-3UTR GCA 90 bp CGGGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCCCCATGGAGCCCTTCTaGCCTTTGGGTCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: RGHLRMCAERAAEGPRGFPMEPF*PLGPVW
Trigger: CCACACTGGACCCAAAGGGCAGAAGGGCTCCATGGG...GAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp GAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCCCATGGAGCCCTTCTaGCCTTTGGGTCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: ECQSQGVGVQGSGKRRWGPMEPF*PLGPVW
Trigger: CCACACTGGACCCAAAGGGCAGAAGGGCTCCATGGG...ACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp CCCTGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCACCCACACCTGGTCCTaGTCTCGCAGCTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: PWPLSGALRLLLPTWSQGTHTWS*SRSSSI
Trigger: GATGCTGGAGCTGCGAGAGCAGGACCAGGTGTGGGT...GCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GAGTGTGGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGAGTCTGACCCACACCTGGTCCTaGTCTCGCAGCTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: ECGALLPGTPTATRLQSLTHTWS*SRSSSI
Trigger: GATGCTGGAGCTGCGAGAGCAGGACCAGGTGTGGGT...CAGACTCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp TGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGGGGCGTCTCACTGAATaGCAAAGCCAGGGAGTCGGA +
Preference number: 4 (lower is better)
Translates to: CQSQGVGVQGSGKRRWGQGRLTE*QSQGVG
Trigger: TCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCC...CTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp GGGCTGATTTGTGTGGGAGGCGGCACAGAAAGCCGATGCCAGGGTGGCAGGCATGCTCTCTCCAGAGGCTaGGGGATCTGGGAGCACCGA +
Preference number: 4 (lower is better)
Translates to: GLICVGGGTESRCQGGRHALSRG*GIWEHR
Trigger: TCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAGAGC...ATGCCTGCCACCCTGGCATCGGCTTTCTGTGCCGCCTCCCACACAAATCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCTCTCTCCAGAGGCTaGGGGATCTGGGAGCACCGA +
Preference number: 4 (lower is better)
Translates to: GSLEDVCREGRGRSQRVLALSRG*GIWEHR
Trigger: TCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAGAGC...GAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp AGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCCCTGGTGATTTCATCTaGCGTCAGCTCTCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: RAAEGPRGFSRVPRPGDFPGDFI*RQLSPE
Trigger: CTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGG...GAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp CGCGGGTGCCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGTCACTTGAGGATGTGTaGAGAGAGGGCCGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: RGCPALVISSAVSSLQRLSLEDV*REGRGR
Trigger: CCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGA...CAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCACCCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp GTGCCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGAGGCACAGAAAGCCGATaGCAGGGTGGCAGGCATGGA +
Preference number: 4 (lower is better)
Translates to: VPRPGDFICRQLSPEAAGGTESR*QGGRHG
Trigger: TCCATGCCTGCCACCCTGGCATCGGCTTTCTGTGCC...TCCCGCAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCACTGGATCAGCCTTGCTaGCAACCAACACAACACACG +
Preference number: 4 (lower is better)
Translates to: GPRKVPEGSRGCPALVISLDQPC*QPTQHT
Trigger: CGTGTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAG...TGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp TGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGGGCTATTGCCTCTCCTaGCACCCAGCTCCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: CQSQGVGVQGSGKRRWGQGYCLS*HPAPES
Trigger: ACTCTCAGGAGCTGGGTGGCAGGAGAGGCAATAGCC...CTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCAGCTGGTCCTGCAATTaGCACAGGGGCTATTGCCTC +
Preference number: 4 (lower is better)
Translates to: AKARESESRDRGRGGGVSSWSCN*HRGYCL
Trigger: GAGGCAATAGCCCCTGTGGCAATTGCAGGACCAGCT...GCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CGCGGGTGCCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGGAGACACCGCAACCCTaGTCCAGCTGGTCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: RGCPALVISSAVSSLQRLETPQP*SSWSCN
Trigger: ATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTC...CAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCACCCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GGGCTGATTTGTGTGGGAGGCGGCACAGAAAGCCGATGCCAGGGTGGCAGGCATGGTCTCCGAGGTCTCTaGGACCAGAAGCGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: GLICVGGGTESRCQGGRHGLRGL*DQKRKR
Trigger: GCGCTTCCGCTTCTGGTCGCAGAGACCTCGGAGACC...ATGCCTGCCACCCTGGCATCGGCTTTCTGTGCCGCCTCCCACACAAATCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339142.6
ENST00000579760.6
CDS-3UTR GCA 90 bp ATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAAGGGTGCAAGCACAATaGCCACTGCCTTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: MPKPGSRSPGIGEEAVGSRVQAQ*PLPCPR
Trigger: CCTGGGGCAAGGCAGTGGGCATTGTGCTTGCACCCT...TGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354124.7
ENST00000578229.5
ENST00000580454.5
CDS-3UTR GCA 90 bp CGGGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCGGGCCTCTCCAGCTCTaGAGCTCTAAGAGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: RGHLRMCAERAAEGPRGFGPLQL*SSKREG
Trigger: ACCCTCCCTCTTAGAGCTGCAGAGCTGGAGAGGCCC...GAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392445.6
CDS-3UTR GCA 90 bp GGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGGAGCCCATCTTCCTaGCGGGCCCTGTGGCTGACA +
Preference number: 4 (lower is better)
Translates to: GVSLNAKARESESRDRGRGSPSS*RALWLT
Trigger: TGTCAGCCACAGGGCCCGGCAGGAAGATGGGCTCCC...TCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392445.6
CDS-3UTR CCA 90 bp GGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGACGGTCGCCGGGTACATaGAGGTACCGGGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: GVSLNAKARESESRDRGRRSPGT*RYRGHS
Trigger: GCTGTGACCCCGGTACCTCCATGTACCCGGCGACCG...TCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp CAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCATTGCCATATTTCCCTTaGAGGCCTCGATCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: QGVGVQGSGKRRWGQHSALPYFP*RPRSPR
Trigger: CCGCGGAGATCGAGGCCTCCAAGGGAAATATGGCAA...TGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp TGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCAGGAGCCCTTCTGCCCTTTaGGTCCAGTGTGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: WPLSGALRLLLPTWSQGRSPSAL*VQCGPW
Trigger: CCAGGGGCCACACTGGACCCAAAGGGCAGAAGGGCT...CCTGCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp CTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGAGCCCTTCTGCCCTTTaGGTCCAGTGTGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LTECQSQGVGVQGSGKRRSPSAL*VQCGPW
Trigger: CCAGGGGCCACACTGGACCCAAAGGGCAGAAGGGCT...CCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp CGGGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCAGTGGTTGCTGTGCATaGGCTTCTTCCGGCCCACCG +
Preference number: 4 (lower is better)
Translates to: RGHLRMCAERAAEGPRGFSGCCA*ASSGPP
Trigger: CGGTGGGCCGGAAGAAGCCCATGCACAGCAACCACT...GAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CCA 90 bp ATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAAGTGGTTGCTGTGCATaGGCTTCTTCCGGCCCACCG +
Preference number: 4 (lower is better)
Translates to: MPKPGSRSPGIGEEAVGSSGCCA*ASSGPP
Trigger: CGGTGGGCCGGAAGAAGCCCATGCACAGCAACCACT...TGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp CTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGAGTGGTTGCTGTGCATaGGCTTCTTCCGGCCCACCG +
Preference number: 4 (lower is better)
Translates to: LNAKARESESRDRGRGGGSGCCA*ASSGPP
Trigger: CGGTGGGCCGGAAGAAGCCCATGCACAGCAACCACT...CCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp GGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGTACCCACACCTaGTCCTGCTCTCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GRLTECQSQGVGVQGSGKRRTHT*SCSRSS
Trigger: GGAGCTGCGAGAGCAGGACCAGGTGTGGGTACGCCT...CTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp GGGCTGATTTGTGTGGGAGGCGGCACAGAAAGCCGATGCCAGGGTGGCAGGCATAGGCGTACCCACACCTaGTCCTGCTCTCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GLICVGGGTESRCQGGRHRRTHT*SCSRSS
Trigger: GGAGCTGCGAGAGCAGGACCAGGTGTGGGTACGCCT...ATGCCTGCCACCCTGGCATCGGCTTTCTGTGCCGCCTCCCACACAAATCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GAGAGCACCGTGGAGACACCGCAACCCTGCTCCAGCTGGTCCTGCAATTGCCACAGGCGTACCCACACCTaGTCCTGCTCTCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ESTVETPQPCSSWSCNCHRRTHT*SCSRSS
Trigger: GGAGCTGCGAGAGCAGGACCAGGTGTGGGTACGCCT...GTGGCAATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGTGCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCGGGGAAGAGGCGGTaGGGTCAGCACAGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: GFLCVQGVSLNAKARESESGKRR*GQHSAG
Trigger: CCCTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGA...CTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp AGAGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAATGGGAGGCTGACGCCTaGGGCCCCAGCCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: RALGQGHRDVRVHLSLKKWEADA*GPSPHH
Trigger: GTGATGGGGGCTGGGGCCCCAGGCGTCAGCCTCCCA...TTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp TCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGACCCAGGGGTCCCTaGCCACTGTCAGGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SLNAKARESESRDRGRGGGPRGP*PLSGAL
Trigger: AAGGGCTCCTGACAGTGGCCAGGGACCCCTGGGTCC...ACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAAGCCGATGCCAGGGTaGCAGGCATGGAGACCACCC +
Preference number: 4 (lower is better)
Translates to: GRLTECQSQGVGVQGSGKKPMPG*QAWRPP
Trigger: GGGTGGTCTCCATGCCTGCCACCCTGGCATCGGCTT...CTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GGGCTGATTTGTGTGGGAGGCGGCACAGAAAGCCGATGCCAGGGTGGCAGGCATAAGCCGATGCCAGGGTaGCAGGCATGGAGACCACCC +
Preference number: 4 (lower is better)
Translates to: GLICVGGGTESRCQGGRHKPMPG*QAWRPP
Trigger: GGGTGGTCTCCATGCCTGCCACCCTGGCATCGGCTT...ATGCCTGCCACCCTGGCATCGGCTTTCTGTGCCGCCTCCCACACAAATCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp CCCTGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCCCCCTCTCAGGCTACTaGTCAGAGGCCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: PWPLSGALRLLLPTWSQGPLSGY*SEAWMR
Trigger: CCTCATCCAGGCCTCTGACCAGTAGCCTGAGAGGGG...GCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GTGCCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGACCCCTCTCAGGCTACTaGTCAGAGGCCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: VPRPGDFICRQLSPEAAGPLSGY*SEAWMR
Trigger: CCTCATCCAGGCCTCTGACCAGTAGCCTGAGAGGGG...TCCCGCAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp TCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGATCTGGGAGCACCGATCGCTTTGCCCTGGGCATCAACATaGGGTGAGGTGGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SAVSSLQRLRDLGAPIALPWAST*GEVERG
Trigger: GCCCCTCTCCACCTCACCCCATGTTGATGCCCAGGG...CAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAGAGCTGACGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp ATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCACTTAAGCAGCGAGTGTaGCGCTCTGCTTCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: MPKPGSRSPGIGEEAVGSLKQRV*RSASGH
Trigger: GTGCCCGGAAGCAGAGCGCCACACTCGCTGCTTAAG...TGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGCTTCCTGCCGGGCCCTaGAGCGAAGAGTGGGACTCA +
Preference number: 4 (lower is better)
Translates to: GRLTECQSQGVGVQGSGKLPAGP*SEEWDS
Trigger: TGAGTCCCACTCTTCGCTCCAGGGCCCGGCAGGAAG...CTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339142.6
ENST00000581774.5
CDS-3UTR CCA 90 bp GGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCAGCCCTCTCGGCATaGTCCGGAGGCGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: GFLCVQGVSLNAKARESESALSA*SGGDGS
Trigger: GCTGCCGTCGCCTCCGGACCATGCCGAGAGGGCTGA...CTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp AGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCACTGTTGTTGTTGGGTaGACTCTAGGGGCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RAAEGPRGFSRVPRPGDFTVVVG*TLGASP
Trigger: TGGAGAGGCCCCTAGAGTCCACCCAACAACAACAGT...GAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392445.6
CDS-3UTR TCA 90 bp TCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGCTCTGGCTTTGCATaGTGCTGCGGTCGCCCACCT +
Preference number: 4 (lower is better)
Translates to: SLNAKARESESRDRGRGGGSGFA*CCGRPP
Trigger: AGGTGGGCGACCGCAGCATCATGCAAAGCCAGAGCC...ACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR TCA 90 bp AAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGTGTCCAGCTCCTCGCTaGAGATGGCGTTCTCACGTT +
Preference number: 4 (lower is better)
Translates to: KPGSRSPGIGEEAVGSAQCPAPR*RWRSHV
Trigger: AACGTGAGAACGCCATCTTCAGCGAGGAGCTGGACA...CTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR TCA 90 bp GAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTTGCAGGGCGTCTCACTaGATGCCAAAGCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: ECQSQGVGVQGSGKRRWGCRASH*MPKPGS
Trigger: ACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCA...ACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR TCA 90 bp GCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGATCTGGGACCGTGCGGGGTCACTTaGGGATGTGTGCAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: ALVISSAVSSLQRLRDLGPCGVT*GCVQRG
Trigger: CCCTCTCTGCACACATCCTCAAGTGACCCCGCACGG...TCCCAGATCCCGCAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR TCA 90 bp GGCAGTGGGGGCAGAAGGGGTCTGGATCAGCCTTGCTGCCAACCAACACAACACCCGTGCGGGGTCACTTaGGGATGTGTGCAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GSGGRRGLDQPCCQPTQHPCGVT*GCVQRG
Trigger: CCCTCTCTGCACACATCCTCAAGTGACCCCGCACGG...GTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACCCCTTCTGCCCCCACTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp TCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTCCGTGCGGGGTCACTTaGGGATGTGTGCAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SLNAKARESESRDRGRGGPCGVT*GCVQRG
Trigger: CCCTCTCTGCACACATCCTCAAGTGACCCCGCACGG...ACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR TCA 90 bp CAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAATCACCTCGCAGCTGTaGCTCAGAAAGACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: QGVGVQGSGKRRWGQHSAITSQL*LRKTSR
Trigger: TCTGCTGGTCTTTCTGAGTCACAGCTGCGAGGTGAT...TGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp TCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGATCTGGGAGCACCGATCGCTTTGCACACGTGGAAGCGGTaGTGCTTAGCCCACGAGGAG +
Preference number: 4 (lower is better)
Translates to: SAVSSLQRLRDLGAPIALHTWKR*CLAHEE
Trigger: CTCCTCGTGGGCTAAGCATCACCGCTTCCACGTGTG...CAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAGAGCTGACGGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp GGGCTGATTTGTGTGGGAGGCGGCACAGAAAGCCGATGCCAGGGTGGCAGGCATCTCTGGTCTCAGGACTaGGGCTCACAGGAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GLICVGGGTESRCQGGRHLWSQD*GSQEPE
Trigger: CTCAGGCTCCTGTGAGCCTCAGTCCTGAGACCAGAG...ATGCCTGCCACCCTGGCATCGGCTTTCTGTGCCGCCTCCCACACAAATCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp TCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGATCTGGGAGCACCGATCGCTTTGGGCATCAACATGGGGTaGGGTGGAGAGGGGCTATGG +
Preference number: 4 (lower is better)
Translates to: SAVSSLQRLRDLGAPIALGINMG*GGEGLW
Trigger: CCATAGCCCCTCTCCACCTCACCCCATGTTGATGCC...CAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAGAGCTGACGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GGGCTGATTTGTGTGGGAGGCGGCACAGAAAGCCGATGCCAGGGTGGCAGGCATCCAGGTCCGGGGCGATaGACAGACTCGGTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: GLICVGGGTESRCQGGRHPGPGR*TDSVKE
Trigger: TTCCTTCACCGAGTCTGTGCATCGCCCCGGACCTGG...ATGCCTGCCACCCTGGCATCGGCTTTCTGTGCCGCCTCCCACACAAATCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CCAGCGGGTAGCAAGAGTGACCCTGGGCATCAACATGGGGTGAGGTGGAGAGGGCCCATGGAGCCCTTCTaGCCTTTGGGTCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: PAGSKSDPGHQHGVRWRGPMEPF*PLGPVW
Trigger: CCACACTGGACCCAAAGGGCAGAAGGGCTCCATGGG...CCCTCTCCACCTCACCCCATGTTGATGCCCAGGGTCACTCTTGCTACCCGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGCCCATGGAGCCCTTCTaGCCTTTGGGTCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LTECQSQGVGVQGSGKRRPMEPF*PLGPVW
Trigger: CCACACTGGACCCAAAGGGCAGAAGGGCTCCATGGG...CCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp TCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGACGGCGTAGTGGCTCTTaGACCGCTCCCCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SLWLSVCAGRLTECQSQGRRSGS*TAPQGP
Trigger: GGGCCCCTGGGGAGCGGTGCAAGAGCCACTACGCCG...TCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp GCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGATCTGGGACTGCGGTCGCCCACCTaGGCGAACAAGATCACCACC +
Preference number: 4 (lower is better)
Translates to: ALVISSAVSSLQRLRDLGLRSPT*ANKITT
Trigger: GGTGGTGATCTTGTTCGCGCAGGTGGGCGACCGCAG...TCCCAGATCCCGCAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp TCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTCTGCGGTCGCCCACCTaGGCGAACAAGATCACCACC +
Preference number: 4 (lower is better)
Translates to: SLNAKARESESRDRGRGGLRSPT*ANKITT
Trigger: GGTGGTGATCTTGTTCGCGCAGGTGGGCGACCGCAG...ACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp CTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGACCCACACCTGGTCCTaGTCTCGCAGCTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: LTECQSQGVGVQGSGKRRTHTWS*SRSSSI
Trigger: GATGCTGGAGCTGCGAGAGCAGGACCAGGTGTGGGT...CCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp GCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGATCTGGGAGCTCTCTCCAGAGGCTaGGGGATCTGGGAGCACCGA +
Preference number: 4 (lower is better)
Translates to: ALVISSAVSSLQRLRDLGALSRG*GIWEHR
Trigger: TCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAGAGC...TCCCAGATCCCGCAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp TGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGAGGGTTCTCGCGGGTaGCCCGCCCTGGTGATTTCA +
Preference number: 4 (lower is better)
Translates to: CAGRLTECQSQGVGVQGSEGSRG*PALVIS
Trigger: TGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTC...CGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp GGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGAGGGTTCTCGCGGGTaGCCCGCCCTGGTGATTTCA +
Preference number: 4 (lower is better)
Translates to: GVSLNAKARESESRDRGREGSRG*PALVIS
Trigger: TGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTC...TCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp GCGGGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTTCACTTGAGGATGTGTaGAGAGAGGGCCGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: AGSLEDVCREGRGRSQRVSLEDV*REGRGR
Trigger: CCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGA...AACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp GAGTGTGGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGAGTCTGCCTCATAGAAACATCTaGAGGCCTGGGGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: ECGALLPGTPTATRLQSLPHRNI*RPGGPR
Trigger: CCTGGGTCCCCCAGGCCTGCAGATGTTTCTATGAGG...CAGACTCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCTGGATCAGCCTTGCTaGCAACCAACACAACACACG +
Preference number: 4 (lower is better)
Translates to: EDVCREGRGRSQRVLAGALDQPC*QPTQHT
Trigger: CGTGTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAG...GGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCCTGGATCAGCCTTGCTaGCAACCAACACAACACACG +
Preference number: 4 (lower is better)
Translates to: AKARESESRDRGRGGGVSLDQPC*QPTQHT
Trigger: CGTGTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAG...GCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp AGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGGGTCTGGATCAGCCTTaGTGCCAACCAACACAACAC +
Preference number: 4 (lower is better)
Translates to: RESESRDRGRGGGVSTAQGLDQP*CQPTQH
Trigger: GTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACC...CTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GTGCCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGAGGCTATTGCCTCTCCTaGCACCCAGCTCCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: VPRPGDFICRQLSPEAAGGYCLS*HPAPES
Trigger: ACTCTCAGGAGCTGGGTGGCAGGAGAGGCAATAGCC...TCCCGCAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp TGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCAGGTGCCACAGGGGCTATTaGCTCTCCTGCCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: WPLSGALRLLLPTWSQGRCHRGY*LSCHPA
Trigger: AGCTGGGTGGCAGGAGAGGCAATAGCCCCTGTGGCA...CCTGCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGCCACAGGGGCTATTaGCTCTCCTGCCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: LTECQSQGVGVQGSGKRRCHRGY*LSCHPA
Trigger: AGCTGGGTGGCAGGAGAGGCAATAGCCCCTGTGGCA...CCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CGCGGGTGCCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGTGCTCCAGCTGGTCCTaGAATTGCCACAGGGGCTAT +
Preference number: 4 (lower is better)
Translates to: RGCPALVISSAVSSLQRLCSSWS*NCHRGY
Trigger: ATAGCCCCTGTGGCAATTGCAGGACCAGCTGGAGCA...CAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCACCCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GTGCCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGAGAGACACCGCAACCCTaGTCCAGCTGGTCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: VPRPGDFICRQLSPEAAGETPQP*SSWSCN
Trigger: ATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTC...TCCCGCAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGAGGGTGCAAGCACAATaGCCACTGCCTTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LTECQSQGVGVQGSGKRRRVQAQ*PLPCPR
Trigger: CCTGGGGCAAGGCAGTGGGCATTGTGCTTGCACCCT...CCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354124.7
ENST00000578229.5
ENST00000580454.5
CDS-3UTR GCA 90 bp GGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGGGGAGCCCATCTTCCTaGCGGGCCCTTTCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: GFLCVQGVSLNAKARESEGSPSS*RALSLP
Trigger: AGGCAGGGAAAGGGCCCGGCAGGAAGATGGGCTCCC...CTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354124.7
ENST00000578229.5
CDS-3UTR CCA 90 bp GAGAGCACCGTGGAGACACCGCAACCCTGCTCCAGCTGGTCCTGCAATTGCCACATAGTGATGTTGATCTaGGGCACGGCGGTCGCCGGG +
Preference number: 4 (lower is better)
Translates to: ESTVETPQPCSSWSCNCHIVMLI*GTAVAG
Trigger: CCCGGCGACCGCCGTGCCCCAGATCAACATCACTAT...GTGGCAATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGTGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp CTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGATAGTGATGTTGATCTaGGGCACGGCGGTCGCCGGG +
Preference number: 4 (lower is better)
Translates to: LTECQSQGVGVQGSGKRRIVMLI*GTAVAG
Trigger: CCCGGCGACCGCCGTGCCCCAGATCAACATCACTAT...CCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp TGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGTTGCCATATTTCCCTTaGAGGCCTCGATCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: CQSQGVGVQGSGKRRWGQLPYFP*RPRSPR
Trigger: CCGCGGAGATCGAGGCCTCCAAGGGAAATATGGCAA...CTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp GGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGTGGTTGCTGTGCATaGGCTTCTTCCGGCCCACCG +
Preference number: 4 (lower is better)
Translates to: GRLTECQSQGVGVQGSGKSGCCA*ASSGPP
Trigger: CGGTGGGCCGGAAGAAGCCCATGCACAGCAACCACT...CTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp TCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTAGGCGTACCCACACCTaGTCCTGCTCTCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLNAKARESESRDRGRGGRRTHT*SCSRSS
Trigger: GGAGCTGCGAGAGCAGGACCAGGTGTGGGTACGCCT...ACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp TGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGAGGCGTACCCACACCTaGTCCTGCTCTCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CAGRLTECQSQGVGVQGSRRTHT*SCSRSS
Trigger: GGAGCTGCGAGAGCAGGACCAGGTGTGGGTACGCCT...CGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp AGAGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAATCGGGGAAGAGGCGGTaGGGTCAGCACAGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: RALGQGHRDVRVHLSLKKSGKRR*GQHSAG
Trigger: CCCTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGA...TTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GAGTGTGGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGAGTCTGATTATTTCCAAGGACTaGAGCCGCGGTGCCGCACCC +
Preference number: 4 (lower is better)
Translates to: ECGALLPGTPTATRLQSLIISKD*SRGAAP
Trigger: GGGTGCGGCACCGCGGCTCCAGTCCTTGGAAATAAT...CAGACTCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp ATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAAAAAGGCCTCTCTCTTaGGAGCCAGCAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: MPKPGSRSPGIGEEAVGSKRPLS*EPAGWL
Trigger: CAGCCAGCCTGCTGGCTCCCAAGAGAGAGGCCTTTT...TGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GGCAGTGGGGGCAGAAGGGGTCTGGATCAGCCTTGCTGCCAACCAACACAACACGGGGTGGCACAGGGGTaGAGCAGAGCCACACATGGA +
Preference number: 4 (lower is better)
Translates to: GSGGRRGLDQPCCQPTQHGVAQG*SRATHG
Trigger: TCCATGTGTGGCTCTGCTCCACCCCTGTGCCACCCC...GTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACCCCTTCTGCCCCCACTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp CTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGTGTGCAGAGAGCCTGACACGGGTGATTaGGACGTGTACTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LPPPASRRAGSLEDVCREPDTGD*DVYFLL
Trigger: CAAGAGGAAGTACACGTCCCAATCACCCGTGTCAGG...CTCTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAAGGGCGAGAGCACCGTaGAGACACCGCAACCCTGCT +
Preference number: 4 (lower is better)
Translates to: GVSLNAKARESESRDRGRRARAP*RHRNPA
Trigger: AGCAGGGTTGCGGTGTCTCCACGGTGCTCTCGCCCT...TCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp AGCGGGGGTTTGGGGGCCCAGCGGGTAGCAAGAGTGACCCTGGGCATCAACATGGGGCTATGGGGTTCCTaGAGATCAGAGTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SGGLGAQRVARVTLGINMGLWGS*RSESGV
Trigger: CACCCCAGACTCTGATCTCCAGGAACCCCATAGCCC...CATGTTGATGCCCAGGGTCACTCTTGCTACCCGCTGGGCCCCCAAACCCCCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GAGAGCACCGTGGAGACACCGCAACCCTGCTCCAGCTGGTCCTGCAATTGCCACCTTAAGCAGCGAGTGTaGCGCTCTGCTTCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: ESTVETPQPCSSWSCNCHLKQRV*RSASGH
Trigger: GTGCCCGGAAGCAGAGCGCCACACTCGCTGCTTAAG...GTGGCAATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGTGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp TGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCAGGCTTAAGCAGCGAGTGTaGCGCTCTGCTTCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: WPLSGALRLLLPTWSQGRLKQRV*RSASGH
Trigger: GTGCCCGGAAGCAGAGCGCCACACTCGCTGCTTAAG...CCTGCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GAGAGCACCGTGGAGACACCGCAACCCTGCTCCAGCTGGTCCTGCAATTGCCACTCCTGCTGTTCCCCCTaGACATGGGGCACACGACTC +
Preference number: 4 (lower is better)
Translates to: ESTVETPQPCSSWSCNCHSCCSP*TWGTRL
Trigger: GAGTCGTGTGCCCCATGTCCAGGGGGAACAGCAGGA...GTGGCAATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGTGCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGTCCTGCTGTTCCCCCTaGACATGGGGCACACGACTC +
Preference number: 4 (lower is better)
Translates to: GRLTECQSQGVGVQGSGKSCCSP*TWGTRL
Trigger: GAGTCGTGTGCCCCATGTCCAGGGGGAACAGCAGGA...CTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp CGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCAGCCCTCTCGGCATaGTCCGGAGGCGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: RFGFLCVQGVSLNAKARESALSA*SGGDGS
Trigger: GCTGCCGTCGCCTCCGGACCATGCCGAGAGGGCTGA...CTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR TCA 90 bp TCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGATCTGGGAGCACCGATCGCTTTGGGGAGCCCCTGGTCCTaGCTGGGCCTGTATTTTTCA +
Preference number: 4 (lower is better)
Translates to: SAVSSLQRLRDLGAPIALGSPWS*LGLYFS
Trigger: TGAAAAATACAGGCCCAGTCAGGACCAGGGGCTCCC...CAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAGAGCTGACGGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR TCA 90 bp GGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGGGGAGCCCCTGGTCCTaGCTGGGCCTGTATTTTTCA +
Preference number: 4 (lower is better)
Translates to: GRLTECQSQGVGVQGSGKGSPWS*LGLYFS
Trigger: TGAAAAATACAGGCCCAGTCAGGACCAGGGGCTCCC...CTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR TCA 90 bp TGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATGGCTCTGGCTTTGCATaGTGCTGCGGTCGCCCACCT +
Preference number: 4 (lower is better)
Translates to: CVQGVSLNAKARESESRDGSGFA*CCGRPP
Trigger: AGGTGGGCGACCGCAGCATCATGCAAAGCCAGAGCC...ATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR TCA 90 bp GGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGGGCTCTGGCTTTGCATaGTGCTGCGGTCGCCCACCT +
Preference number: 4 (lower is better)
Translates to: GFLCVQGVSLNAKARESEGSGFA*CCGRPP
Trigger: AGGTGGGCGACCGCAGCATCATGCAAAGCCAGAGCC...CTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR TCA 90 bp AGCGGGGGTTTGGGGGCCCAGCGGGTAGCAAGAGTGACCCTGGGCATCAACATGTGTCCAGCTCCTCGCTaGAGATGGCGTTCTCACGTT +
Preference number: 4 (lower is better)
Translates to: SGGLGAQRVARVTLGINMCPAPR*RWRSHV
Trigger: AACGTGAGAACGCCATCTTCAGCGAGGAGCTGGACA...CATGTTGATGCCCAGGGTCACTCTTGCTACCCGCTGGGCCCCCAAACCCCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp TGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCAGGTGCAGGGCGTCTCACTaGATGCCAAAGCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: WPLSGALRLLLPTWSQGRCRASH*MPKPGS
Trigger: ACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCA...CCTGCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp CGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGGGGGCCTTCTGGGGCTaGTTTGTGTGGGAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: RFGFLCVQGVSLNAKAREGAFWG*FVWEAA
Trigger: TGCCGCCTCCCACACAAATCAGCCCCAGAAGGCCCC...CTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp CTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGCGTCAACCCCTCCTGTaGGTACAGGGAGAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: LTECQSQGVGVQGSGKRRRQPLL*VQGERL
Trigger: CAGCCTTTCTCCCTGTACTCACAGGAGGGGTTGACG...CCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578229.5
CDS-3UTR GCA 90 bp GGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGACCAGGTCCGGGGCGATaGACAGACTCGGTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: GVSLNAKARESESRDRGRPGPGR*TDSVKE
Trigger: TTCCTTCACCGAGTCTGTGCATCGCCCCGGACCTGG...TCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000579760.6
ENST00000580454.5
CDS-3UTR GCA 90 bp GGCAGTGGGGGCAGAAGGGGTCTGGATCAGCCTTGCTGCCAACCAACACAACACCCCATGGAGCCCTTCTaGCCTTTGGGTCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: GSGGRRGLDQPCCQPTQHPMEPF*PLGPVW
Trigger: CCACACTGGACCCAAAGGGCAGAAGGGCTCCATGGG...GTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACCCCTTCTGCCCCCACTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCTCTGGTAGTAGTGGTTaGTGTGCATGGGCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: AKARESESRDRGRGGGVSSGSSG*CAWASS
Trigger: GGAAGAAGCCCATGCACAGCAACCACTACTACCAGA...GCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp GCAGCGAGTGTGGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGACCTGGTGATTTCATCTaGCGTCAGCTCTCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: AASVALCFRARPQQLGFRPGDFI*RQLSPE
Trigger: CTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGG...TCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTCGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp TGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCAGGTCACTTGAGGATGTGTaGAGAGAGGGCCGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: WPLSGALRLLLPTWSQGRSLEDV*REGRGR
Trigger: CCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGA...CCTGCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp TGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCAGGCCTCATAGAAACATCTaGAGGCCTGGGGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: WPLSGALRLLLPTWSQGRPHRNI*RPGGPR
Trigger: CCTGGGTCCCCCAGGCCTGCAGATGTTTCTATGAGG...CCTGCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCCCTCATAGAAACATCTaGAGGCCTGGGGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: GSLEDVCREGRGRSQRVLPHRNI*RPGGPR
Trigger: CCTGGGTCCCCCAGGCCTGCAGATGTTTCTATGAGG...GAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GGCAGTGGGGGCAGAAGGGGTCTGGATCAGCCTTGCTGCCAACCAACACAACACGGCACAGAAAGCCGATaGCAGGGTGGCAGGCATGGA +
Preference number: 4 (lower is better)
Translates to: GSGGRRGLDQPCCQPTQHGTESR*QGGRHG
Trigger: TCCATGCCTGCCACCCTGGCATCGGCTTTCTGTGCC...GTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACCCCTTCTGCCCCCACTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp TCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGATCTGGGAGCACCGATCGCTTTGGGCTATTGCCTCTCCTaGCACCCAGCTCCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: SAVSSLQRLRDLGAPIALGYCLS*HPAPES
Trigger: ACTCTCAGGAGCTGGGTGGCAGGAGAGGCAATAGCC...CAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAGAGCTGACGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CCCTGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCAGCTGGTCCTGCAATTaGCACAGGGGCTATTGCCTC +
Preference number: 4 (lower is better)
Translates to: PWPLSGALRLLLPTWSQGSWSCN*HRGYCL
Trigger: GAGGCAATAGCCCCTGTGGCAATTGCAGGACCAGCT...GCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CGGGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCAGCTGGTCCTGCAATTaGCACAGGGGCTATTGCCTC +
Preference number: 4 (lower is better)
Translates to: RGHLRMCAERAAEGPRGFSWSCN*HRGYCL
Trigger: GAGGCAATAGCCCCTGTGGCAATTGCAGGACCAGCT...GAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGGGTCTCCGAGGTCTCTaGGACCAGAAGCGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: GFLCVQGVSLNAKARESEGLRGL*DQKRKR
Trigger: GCGCTTCCGCTTCTGGTCGCAGAGACCTCGGAGACC...CTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339142.6
ENST00000579760.6
ENST00000580454.5
CDS-3UTR GCA 90 bp CGGGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTTTTTGCCCAGGCCCTaGAAACAAGGAGGCCGCATG +
Preference number: 4 (lower is better)
Translates to: RGHLRMCAERAAEGPRGFFLPRP*KQGGRM
Trigger: CATGCGGCCTCCTTGTTTGCAGGGCCTGGGCAAAAA...GAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339142.6
CDS-3UTR GCA 90 bp TGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGAGAGGAAGAAGAGGGTaGAAGCACAATGCCCACTGC +
Preference number: 4 (lower is better)
Translates to: CQSQGVGVQGSGKRRWGQRGRRG*KHNAHC
Trigger: GCAGTGGGCATTGTGCTTGCACCCTCTTCTTCCTCT...CTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354124.7
ENST00000578229.5
ENST00000580454.5
CDS-3UTR CCA 90 bp AGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAAGTCGGTCGCCGGGTACATaGAGGTACCGGGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: SPWARPQGCQGPPIPQESRSPGT*RYRGHS
Trigger: GCTGTGACCCCGGTACCTCCATGTACCCGGCGACCG...ACTTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAATAGTGATGTTGATCTaGGGCACGGCGGTCGCCGGG +
Preference number: 4 (lower is better)
Translates to: GVSLNAKARESESRDRGRIVMLI*GTAVAG
Trigger: CCCGGCGACCGCCGTGCCCCAGATCAACATCACTAT...TCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp TCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTATAGTGATGTTGATCTaGGGCACGGCGGTCGCCGGG +
Preference number: 4 (lower is better)
Translates to: SLNAKARESESRDRGRGGIVMLI*GTAVAG
Trigger: CCCGGCGACCGCCGTGCCCCAGATCAACATCACTAT...ACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp CCCTGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCTTGCCATATTTCCCTTaGAGGCCTCGATCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: PWPLSGALRLLLPTWSQGLPYFP*RPRSPR
Trigger: CCGCGGAGATCGAGGCCTCCAAGGGAAATATGGCAA...GCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp TTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGTTGCCATATTTCCCTTaGAGGCCTCGATCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: LRMCAERAAEGPRGFSRVLPYFP*RPRSPR
Trigger: CCGCGGAGATCGAGGCCTCCAAGGGAAATATGGCAA...CACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CCA 90 bp GAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTTTGCCATATTTCCCTTaGAGGCCTCGATCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: ECQSQGVGVQGSGKRRWGLPYFP*RPRSPR
Trigger: CCGCGGAGATCGAGGCCTCCAAGGGAAATATGGCAA...ACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp TGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATAGCCCTTCTGCCCTTTaGGTCCAGTGTGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: CVQGVSLNAKARESESRDSPSAL*VQCGPW
Trigger: CCAGGGGCCACACTGGACCCAAAGGGCAGAAGGGCT...ATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp GGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAAGTGGTTGCTGTGCATaGGCTTCTTCCGGCCCACCG +
Preference number: 4 (lower is better)
Translates to: GVSLNAKARESESRDRGRSGCCA*ASSGPP
Trigger: CGGTGGGCCGGAAGAAGCCCATGCACAGCAACCACT...TCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp TCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGATCGGGGAAGAGGCGGTaGGGTCAGCACAGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: SLWLSVCAGRLTECQSQGSGKRR*GQHSAG
Trigger: CCCTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGA...TCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp CGATCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGTCGGGGAAGAGGCGGTaGGGTCAGCACAGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: RSLWLSVCAGRLTECQSQSGKRR*GQHSAG
Trigger: CCCTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGA...CTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp GAGAGCACCGTGGAGACACCGCAACCCTGCTCCAGCTGGTCCTGCAATTGCCACATTATTTCCAAGGACTaGAGCCGCGGTGCCGCACCC +
Preference number: 4 (lower is better)
Translates to: ESTVETPQPCSSWSCNCHIISKD*SRGAAP
Trigger: GGGTGCGGCACCGCGGCTCCAGTCCTTGGAAATAAT...GTGGCAATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGTGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GGGCTGATTTGTGTGGGAGGCGGCACAGAAAGCCGATGCCAGGGTGGCAGGCATAAAAGGCCTCTCTCTTaGGAGCCAGCAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GLICVGGGTESRCQGGRHKRPLS*EPAGWL
Trigger: CAGCCAGCCTGCTGGCTCCCAAGAGAGAGGCCTTTT...ATGCCTGCCACCCTGGCATCGGCTTTCTGTGCCGCCTCCCACACAAATCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp TCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGATCTGGGAGCACCGATCGCTTTGAAAAGGCCTCTCTCTTaGGAGCCAGCAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SAVSSLQRLRDLGAPIALKRPLS*EPAGWL
Trigger: CAGCCAGCCTGCTGGCTCCCAAGAGAGAGGCCTTTT...CAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAGAGCTGACGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp AGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAAGTGGACCCAGGGGTCCCTaGCCACTGTCAGGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SPWARPQGCQGPPIPQESGPRGP*PLSGAL
Trigger: AAGGGCTCCTGACAGTGGCCAGGGACCCCTGGGTCC...ACTTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp CGGGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCGAGCAGAGCCACACATaGATGTACCAGGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RGHLRMCAERAAEGPRGFEQSHT*MYQELC
Trigger: GCAGAGCTCCTGGTACATCCATGTGTGGCTCTGCTC...GAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GGCGAGAGCACCGTGGAGACACCGCAACCCTGCTCCAGCTGGTCCTGCAATTGCGAGCAGAGCCACACATaGATGTACCAGGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GESTVETPQPCSSWSCNCEQSHT*MYQELC
Trigger: GCAGAGCTCCTGGTACATCCATGTGTGGCTCTGCTC...GCAATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGTGCTCTCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp TGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATAAGCCGATGCCAGGGTaGCAGGCATGGAGACCACCC +
Preference number: 4 (lower is better)
Translates to: CVQGVSLNAKARESESRDKPMPG*QAWRPP
Trigger: GGGTGGTCTCCATGCCTGCCACCCTGGCATCGGCTT...ATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GGGCTGATTTGTGTGGGAGGCGGCACAGAAAGCCGATGCCAGGGTGGCAGGCATGGGCTATGGGGTTCCTaGAGATCAGAGTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: GLICVGGGTESRCQGGRHGLWGS*RSESGV
Trigger: CACCCCAGACTCTGATCTCCAGGAACCCCATAGCCC...ATGCCTGCCACCCTGGCATCGGCTTTCTGTGCCGCCTCCCACACAAATCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GTGGGGGCAGAAGGGGTCTGGATCAGCCTTGCTGCCAACCAACACAACACACGTCCCTGGGCATCAACATaGGGTGAGGTGGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: VGAEGVWISLAANQHNTRPWAST*GEVERG
Trigger: GCCCCTCTCCACCTCACCCCATGTTGATGCCCAGGG...ACGTGTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACCCCTTCTGCCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp TGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGTCCTGCTGTTCCCCCTaGACATGGGGCACACGACTC +
Preference number: 4 (lower is better)
Translates to: CAGRLTECQSQGVGVQGSSCCSP*TWGTRL
Trigger: GAGTCGTGTGCCCCATGTCCAGGGGGAACAGCAGGA...CGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR TCA 90 bp CCAGCGGGTAGCAAGAGTGACCCTGGGCATCAACATGGGGTGAGGTGGAGAGGGTGTCCAGCTCCTCGCTaGAGATGGCGTTCTCACGTT +
Preference number: 4 (lower is better)
Translates to: PAGSKSDPGHQHGVRWRGCPAPR*RWRSHV
Trigger: AACGTGAGAACGCCATCTTCAGCGAGGAGCTGGACA...CCCTCTCCACCTCACCCCATGTTGATGCCCAGGGTCACTCTTGCTACCCGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp GGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGATGCAGGGCGTCTCACTaGATGCCAAAGCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: GVSLNAKARESESRDRGRCRASH*MPKPGS
Trigger: ACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCA...TCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR TCA 90 bp TGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGTGCAGGGCGTCTCACTaGATGCCAAAGCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: CAGRLTECQSQGVGVQGSCRASH*MPKPGS
Trigger: ACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCA...CGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR TCA 90 bp CCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCAAAGCAGAGTCTCAACTaGAAAGGCCTCTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: PKPGSRSPGIGEEAVGSAKQSLN*KGLSLG
Trigger: CCCAAGAGAGAGGCCTTTTCAGTTGAGACTCTGCTT...TGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp GTGCCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGAATCACCTCGCAGCTGTaGCTCAGAAAGACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: VPRPGDFICRQLSPEAAGITSQL*LRKTSR
Trigger: TCTGCTGGTCTTTCTGAGTCACAGCTGCGAGGTGAT...TCCCGCAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp TCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAAACAAGGAGGCCGCATaGGCCGTCAGGCATCGGGCC +
Preference number: 4 (lower is better)
Translates to: SLWLSVCAGRLTECQSQGNKEAA*AVRHRA
Trigger: GGCCCGATGCCTGACGGCTCATGCGGCCTCCTTGTT...TCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339142.6
ENST00000581774.5
CDS-3UTR TCA 90 bp TCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGATCTGGGAGCACCGATCGCTTTGGCCGGGCCCTGTGGCTaGCATCATGATGATGATGAT +
Preference number: 4 (lower is better)
Translates to: SAVSSLQRLRDLGAPIALAGPCG*HHDDDD
Trigger: ATCATCATCATCATGATGTCAGCCACAGGGCCCGGC...CAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAGAGCTGACGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392445.6
CDS-3UTR GCA 90 bp CCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCATCTGGTAGTAGTGGTTaGTGTGCATGGGCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PKPGSRSPGIGEEAVGSASGSSG*CAWASS
Trigger: GGAAGAAGCCCATGCACAGCAACCACTACTACCAGA...TGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp TGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGCGTCTCACTGAATaGCAAAGCCAGGGAGTCGGA +
Preference number: 4 (lower is better)
Translates to: CAGRLTECQSQGVGVQGSGRLTE*QSQGVG
Trigger: TCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCC...CGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp TCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGCGTCTCACTGAATaGCAAAGCCAGGGAGTCGGA +
Preference number: 4 (lower is better)
Translates to: SLNAKARESESRDRGRGGGRLTE*QSQGVG
Trigger: TCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCC...ACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp TGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGTCACTTGAGGATGTGTaGAGAGAGGGCCGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: CAGRLTECQSQGVGVQGSSLEDV*REGRGR
Trigger: CCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGA...CGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp TTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCTGGATCAGCCTTGCTaGCAACCAACACAACACACG +
Preference number: 4 (lower is better)
Translates to: LRMCAERAAEGPRGFSRVLDQPC*QPTQHT
Trigger: CGTGTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAG...CACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CCCTGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCCTGGATCAGCCTTGCTaGCAACCAACACAACACACG +
Preference number: 4 (lower is better)
Translates to: PWPLSGALRLLLPTWSQGLDQPC*QPTQHT
Trigger: CGTGTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAG...GCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTGGTCTGGATCAGCCTTaGTGCCAACCAACACAACAC +
Preference number: 4 (lower is better)
Translates to: ECQSQGVGVQGSGKRRWGGLDQP*CQPTQH
Trigger: GTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACC...ACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGCTGGTCCTGCAATTaGCACAGGGGCTATTGCCTC +
Preference number: 4 (lower is better)
Translates to: GRLTECQSQGVGVQGSGKSWSCN*HRGYCL
Trigger: GAGGCAATAGCCCCTGTGGCAATTGCAGGACCAGCT...CTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CCGTCAGCTCTCTCCAGAGGCTGCGGGATCTGGGAGCACCGATCGCTTTGGCTTTGCTCCAGCTGGTCCTaGAATTGCCACAGGGGCTAT +
Preference number: 4 (lower is better)
Translates to: PSALSRGCGIWEHRSLWLCSSWS*NCHRGY
Trigger: ATAGCCCCTGTGGCAATTGCAGGACCAGCTGGAGCA...AAGCCAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAGAGCTGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGTGCTCCAGCTGGTCCTaGAATTGCCACAGGGGCTAT +
Preference number: 4 (lower is better)
Translates to: GRLTECQSQGVGVQGSGKCSSWS*NCHRGY
Trigger: ATAGCCCCTGTGGCAATTGCAGGACCAGCTGGAGCA...CTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp AGAGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAAGGTCTCCGAGGTCTCTaGGACCAGAAGCGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: RALGQGHRDVRVHLSLKKGLRGL*DQKRKR
Trigger: GCGCTTCCGCTTCTGGTCGCAGAGACCTCGGAGACC...TTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339142.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CGATCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGGAGCCCATCTTCCTaGCGGGCCCTGGAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: RSLWLSVCAGRLTECQSQGSPSS*RALERR
Trigger: TCTTCGCTCCAGGGCCCGGCAGGAAGATGGGCTCCC...CTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339142.6
ENST00000581774.5
CDS-3UTR GCA 90 bp GGCGAGAGCACCGTGGAGACACCGCAACCCTGCTCCAGCTGGTCCTGCAATTGCAGAGGAAGAAGAGGGTaGAAGCACAATGCCCACTGC +
Preference number: 4 (lower is better)
Translates to: GESTVETPQPCSSWSCNCRGRRG*KHNAHC
Trigger: GCAGTGGGCATTGTGCTTGCACCCTCTTCTTCCTCT...GCAATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGTGCTCTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354124.7
CDS-3UTR CCA 90 bp CGATCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGCGGTCGCCGGGTACATaGAGGTACCGGGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: RSLWLSVCAGRLTECQSQRSPGT*RYRGHS
Trigger: GCTGTGACCCCGGTACCTCCATGTACCCGGCGACCG...CTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp CGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGAGCCCTTCTGCCCTTTaGGTCCAGTGTGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RFGFLCVQGVSLNAKARESPSAL*VQCGPW
Trigger: CCAGGGGCCACACTGGACCCAAAGGGCAGAAGGGCT...CTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp GGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGAGTGGTTGCTGTGCATaGGCTTCTTCCGGCCCACCG +
Preference number: 4 (lower is better)
Translates to: GFLCVQGVSLNAKARESESGCCA*ASSGPP
Trigger: CGGTGGGCCGGAAGAAGCCCATGCACAGCAACCACT...CTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp GTTCCTACGTGGCTTAAAAGAATTAAGCCAGAGGTAGTTTCCTGCCCCCGGCCCTCGGGGAAGAGGCGGTaGGGTCAGCACAGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: VPTWLKRIKPEVVSCPRPSGKRR*GQHSAG
Trigger: CCCTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGA...GGGCCGGGGGCAGGAAACTACCTCTGGCTTAATTCTTTTAAGCCACGTAGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp TCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGGACCCAGGGGTCCCTaGCCACTGTCAGGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SLWLSVCAGRLTECQSQGGPRGP*PLSGAL
Trigger: AAGGGCTCCTGACAGTGGCCAGGGACCCCTGGGTCC...TCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp CAGAGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAACCCCTCTCAGGCTACTaGTCAGAGGCCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: QSPWARPQGCQGPPIPQEPLSGY*SEAWMR
Trigger: CCTCATCCAGGCCTCTGACCAGTAGCCTGAGAGGGG...TTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp AGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAAGTAGGGCGAGAGCACCGTaGAGACACCGCAACCCTGCT +
Preference number: 4 (lower is better)
Translates to: SPWARPQGCQGPPIPQESRARAP*RHRNPA
Trigger: AGCAGGGTTGCGGTGTCTCCACGGTGCTCTCGCCCT...ACTTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGGCTATGGGGTTCCTaGAGATCAGAGTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: GVSLNAKARESESRDRGRGLWGS*RSESGV
Trigger: CACCCCAGACTCTGATCTCCAGGAACCCCATAGCCC...TCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp AGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAAGTCCCTGGGCATCAACATaGGGTGAGGTGGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SPWARPQGCQGPPIPQESPWAST*GEVERG
Trigger: GCCCCTCTCCACCTCACCCCATGTTGATGCCCAGGG...ACTTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp CAGAGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAATCCTGCTGTTCCCCCTaGACATGGGGCACACGACTC +
Preference number: 4 (lower is better)
Translates to: QSPWARPQGCQGPPIPQESCCSP*TWGTRL
Trigger: GAGTCGTGTGCCCCATGTCCAGGGGGAACAGCAGGA...TTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCTGCTGTTCCCCCTaGACATGGGGCACACGACTC +
Preference number: 4 (lower is better)
Translates to: GFLCVQGVSLNAKARESESCCSP*TWGTRL
Trigger: GAGTCGTGTGCCCCATGTCCAGGGGGAACAGCAGGA...CTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp GTTCCTACGTGGCTTAAAAGAATTAAGCCAGAGGTAGTTTCCTGCCCCCGGCCCTCAGCCCTCTCGGCATaGTCCGGAGGCGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: VPTWLKRIKPEVVSCPRPSALSA*SGGDGS
Trigger: GCTGCCGTCGCCTCCGGACCATGCCGAGAGGGCTGA...GGGCCGGGGGCAGGAAACTACCTCTGGCTTAATTCTTTTAAGCCACGTAGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp TGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGTTTCTTTCCCTGCCTaGAGTGTCCTCCCATCCGCC +
Preference number: 4 (lower is better)
Translates to: CAGRLTECQSQGVGVQGSVSFPA*SVLPSA
Trigger: GGCGGATGGGAGGACACTCCAGGCAGGGAAAGAAAC...CGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580454.5
CDS-3UTR TCA 90 bp TGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATGGGAGCCCCTGGTCCTaGCTGGGCCTGTATTTTTCA +
Preference number: 4 (lower is better)
Translates to: CVQGVSLNAKARESESRDGSPWS*LGLYFS
Trigger: TGAAAAATACAGGCCCAGTCAGGACCAGGGGCTCCC...ATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR TCA 90 bp GGCAGTGGGGGCAGAAGGGGTCTGGATCAGCCTTGCTGCCAACCAACACAACACTGTCCAGCTCCTCGCTaGAGATGGCGTTCTCACGTT +
Preference number: 4 (lower is better)
Translates to: GSGGRRGLDQPCCQPTQHCPAPR*RWRSHV
Trigger: AACGTGAGAACGCCATCTTCAGCGAGGAGCTGGACA...GTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACCCCTTCTGCCCCCACTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp TCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTTGTCCAGCTCCTCGCTaGAGATGGCGTTCTCACGTT +
Preference number: 4 (lower is better)
Translates to: SLNAKARESESRDRGRGGCPAPR*RWRSHV
Trigger: AACGTGAGAACGCCATCTTCAGCGAGGAGCTGGACA...ACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR TCA 90 bp GGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGATGTCCAGCTCCTCGCTaGAGATGGCGTTCTCACGTT +
Preference number: 4 (lower is better)
Translates to: GVSLNAKARESESRDRGRCPAPR*RWRSHV
Trigger: AACGTGAGAACGCCATCTTCAGCGAGGAGCTGGACA...TCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR TCA 90 bp CGGGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCAAGCAGAGTCTCAACTaGAAAGGCCTCTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: RGHLRMCAERAAEGPRGFKQSLN*KGLSLG
Trigger: CCCAAGAGAGAGGCCTTTTCAGTTGAGACTCTGCTT...GAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp TCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGATCTGGGAGCACCGATCGCTTTGATCACCTCGCAGCTGTaGCTCAGAAAGACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SAVSSLQRLRDLGAPIALITSQL*LRKTSR
Trigger: TCTGCTGGTCTTTCTGAGTCACAGCTGCGAGGTGAT...CAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAGAGCTGACGGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp CAGCTCCTGAGAGTGAATCCTGACACGGGTGATTGGGACGTGTACTTCCTCTTGGGGGCCTTCTGGGGCTaGTTTGTGTGGGAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: QLLRVNPDTGDWDVYFLLGAFWG*FVWEAA
Trigger: TGCCGCCTCCCACACAAATCAGCCCCAGAAGGCCCC...CAAGAGGAAGTACACGTCCCAATCACCCGTGTCAGGATTCACTCTCAGGAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp AGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAAGTCACACGTGGAAGCGGTaGTGCTTAGCCCACGAGGAG +
Preference number: 4 (lower is better)
Translates to: SPWARPQGCQGPPIPQESHTWKR*CLAHEE
Trigger: CTCCTCGTGGGCTAAGCATCACCGCTTCCACGTGTG...ACTTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp GTGGGGGCAGAAGGGGTCTGGATCAGCCTTGCTGCCAACCAACACAACACACGTAGGCTCACAGGAGCCTaGGAAACAGACAAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: VGAEGVWISLAANQHNTRRLTGA*ETDKRE
Trigger: CTCCCGCTTGTCTGTTTCTCAGGCTCCTGTGAGCCT...ACGTGTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACCCCTTCTGCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp AGAGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAACTCTGGTCTCAGGACTaGGGCTCACAGGAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RALGQGHRDVRVHLSLKKLWSQD*GSQEPE
Trigger: CTCAGGCTCCTGTGAGCCTCAGTCCTGAGACCAGAG...TTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp CGATCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGCACCAACAGCTGTCCTaGGCCCACTCTGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RSLWLSVCAGRLTECQSQHQQLS*AHSAGG
Trigger: GCCACCTGCAGAGTGGGCTCAGGACAGCTGTTGGTG...CTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581774.5
CDS-3UTR GCA 90 bp AGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAAGTCCAGGTCCGGGGCGATaGACAGACTCGGTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: SPWARPQGCQGPPIPQESPGPGR*TDSVKE
Trigger: TTCCTTCACCGAGTCTGTGCATCGCCCCGGACCTGG...ACTTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGCCCATGGAGCCCTTCTaGCCTTTGGGTCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: RFGFLCVQGVSLNAKAREPMEPF*PLGPVW
Trigger: CCACACTGGACCCAAAGGGCAGAAGGGCTCCATGGG...CTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp TTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGTCTGGTAGTAGTGGTTaGTGTGCATGGGCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LRMCAERAAEGPRGFSRVSGSSG*CAWASS
Trigger: GGAAGAAGCCCATGCACAGCAACCACTACTACCAGA...CACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp ATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCATCTGGTAGTAGTGGTTaGTGTGCATGGGCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: MPKPGSRSPGIGEEAVGSSGSSG*CAWASS
Trigger: GGAAGAAGCCCATGCACAGCAACCACTACTACCAGA...TGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp CGATCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGCTGCGGTCGCCCACCTaGGCGAACAAGATCACCACC +
Preference number: 4 (lower is better)
Translates to: RSLWLSVCAGRLTECQSQLRSPT*ANKITT
Trigger: GGTGGTGATCTTGTTCGCGCAGGTGGGCGACCGCAG...CTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp TCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGACTGCGGTCGCCCACCTaGGCGAACAAGATCACCACC +
Preference number: 4 (lower is better)
Translates to: SLWLSVCAGRLTECQSQGLRSPT*ANKITT
Trigger: GGTGGTGATCTTGTTCGCGCAGGTGGGCGACCGCAG...TCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp AGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAAGTACCCACACCTGGTCCTaGTCTCGCAGCTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: SPWARPQGCQGPPIPQESTHTWS*SRSSSI
Trigger: GATGCTGGAGCTGCGAGAGCAGGACCAGGTGTGGGT...ACTTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp TGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCAGGCCTGGTGATTTCATCTaGCGTCAGCTCTCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: WPLSGALRLLLPTWSQGRPGDFI*RQLSPE
Trigger: CTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGG...CCTGCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GGGCTGATTTGTGTGGGAGGCGGCACAGAAAGCCGATGCCAGGGTGGCAGGCATCCTGGTGATTTCATCTaGCGTCAGCTCTCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: GLICVGGGTESRCQGGRHPGDFI*RQLSPE
Trigger: CTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGG...ATGCCTGCCACCCTGGCATCGGCTTTCTGTGCCGCCTCCCACACAAATCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CGATCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGAGGGTTCTCGCGGGTaGCCCGCCCTGGTGATTTCA +
Preference number: 4 (lower is better)
Translates to: RSLWLSVCAGRLTECQSQEGSRG*PALVIS
Trigger: TGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTC...CTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp AGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAAGTCAGGAGCCCTTCGGCTaGTTCTACCAACCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: SPWARPQGCQGPPIPQESQEPFG*FYQPGA
Trigger: GGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTG...ACTTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGGGCTATTGCCTCTCCTaGCACCCAGCTCCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: GFLCVQGVSLNAKARESEGYCLS*HPAPES
Trigger: ACTCTCAGGAGCTGGGTGGCAGGAGAGGCAATAGCC...CTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGAGAGGAAGAAGAGGGTaGAAGCACAATGCCCACTGC +
Preference number: 4 (lower is better)
Translates to: LTECQSQGVGVQGSGKRRRGRRG*KHNAHC
Trigger: GCAGTGGGCATTGTGCTTGCACCCTCTTCTTCCTCT...CCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354124.7
ENST00000578229.5
ENST00000580454.5
CDS-3UTR GCA 90 bp CAGCTCCTGAGAGTGAATCCTGACACGGGTGATTGGGACGTGTACTTCCTCTTGTCCCCGGTTGGCAGGTaGTGGAGAGGCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: QLLRVNPDTGDWDVYFLLSPVGR*WRGLLE
Trigger: CTCCAGGAGGCCTCTCCAGCACCTGCCAACCGGGGA...CAAGAGGAAGTACACGTCCCAATCACCCGTGTCAGGATTCACTCTCAGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392445.6
CDS-3UTR GCA 90 bp CGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGGGGTGGGGAAGCTTCTaGTTGTCCTCAGACCTCGGC +
Preference number: 4 (lower is better)
Translates to: RFGFLCVQGVSLNAKAREGWGSF*LSSDLG
Trigger: GCCGAGGTCTGAGGACAAGCAGAAGCTTCCCCACCC...CTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392445.6
CDS-3UTR GCA 90 bp GGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCTCACACACCCATGCATaGATACACGCACTCACGACG +
Preference number: 4 (lower is better)
Translates to: GSLEDVCREGRGRSQRVLSHTHA*IHALTT
Trigger: CGTCGTGAGTGCGTGTATGCATGCATGGGTGTGTGA...GAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580474.1
CDS-3UTR GCA 90 bp ATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCACACGCCACTGGGAAATaGTGCAGTTACACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: MPKPGSRSPGIGEEAVGSHATGK*CSYTAS
Trigger: AGAAGCTGTGTAACTGCAGCATTTCCCAGTGGCGTG...TGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580474.1
CDS-3UTR CCA 90 bp GGCGAGAGCACCGTGGAGACACCGCAACCCTGCTCCAGCTGGTCCTGCAATTGCGCCCCTGGTCCTGACTaGGCCTGTATTTTTCATGTT +
Preference number: 4 (lower is better)
Translates to: GESTVETPQPCSSWSCNCAPGPD*ACIFHV
Trigger: AACATGAAAAATACAGGCCCAGTCAGGACCAGGGGC...GCAATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGTGCTCTCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGATTGCCATATTTCCCTTaGAGGCCTCGATCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: GVSLNAKARESESRDRGRLPYFP*RPRSPR
Trigger: CCGCGGAGATCGAGGCCTCCAAGGGAAATATGGCAA...TCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp CGATCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGAGCCCTTCTGCCCTTTaGGTCCAGTGTGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RSLWLSVCAGRLTECQSQSPSAL*VQCGPW
Trigger: CCAGGGGCCACACTGGACCCAAAGGGCAGAAGGGCT...CTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp AGAGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAAAGTGGTTGCTGTGCATaGGCTTCTTCCGGCCCACCG +
Preference number: 4 (lower is better)
Translates to: RALGQGHRDVRVHLSLKKSGCCA*ASSGPP
Trigger: CGGTGGGCCGGAAGAAGCCCATGCACAGCAACCACT...TTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp AGAGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAACCCCTCTCAGGCTACTaGTCAGAGGCCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: RALGQGHRDVRVHLSLKKPLSGY*SEAWMR
Trigger: CCTCATCCAGGCCTCTGACCAGTAGCCTGAGAGGGG...TTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp TCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGATCTGGGAGCACCGATCGCTTTGCCTGACACGGGTGATTaGGACGTGTACTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: SAVSSLQRLRDLGAPIALPDTGD*DVYFLL
Trigger: CAAGAGGAAGTACACGTCCCAATCACCCGTGTCAGG...CAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAGAGCTGACGGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp TGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCAGGCCTGACACGGGTGATTaGGACGTGTACTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: WPLSGALRLLLPTWSQGRPDTGD*DVYFLL
Trigger: CAAGAGGAAGTACACGTCCCAATCACCCGTGTCAGG...CCTGCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GGCGAGAGCACCGTGGAGACACCGCAACCCTGCTCCAGCTGGTCCTGCAATTGCTTTTCTGGAAAGAGCTaGGGGAGCTTAAGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: GESTVETPQPCSSWSCNCFSGKS*GSLSSE
Trigger: CTCGCTGCTTAAGCTCCCCCAGCTCTTTCCAGAAAA...GCAATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGTGCTCTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp CCCTGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCTTTTCTGGAAAGAGCTaGGGGAGCTTAAGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: PWPLSGALRLLLPTWSQGFSGKS*GSLSSE
Trigger: CTCGCTGCTTAAGCTCCCCCAGCTCTTTCCAGAAAA...GCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp ATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCGAGTTTAATGTTTTCTaGAAAGAGCTGGGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: MCAERAAEGPRGFSRVPREFNVF*KELGEL
Trigger: AAGCTCCCCCAGCTCTTTCCAGAAAACATTAAACTC...GCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGATCTGGGACCAGCCTCACGCCACTaGGAAATGCTGCAGTTACAC +
Preference number: 4 (lower is better)
Translates to: ALVISSAVSSLQRLRDLGPASRH*EMLQLH
Trigger: GTGTAACTGCAGCATTTCCCAGTGGCGTGAGGCTGG...TCCCAGATCCCGCAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580474.1
CDS-3UTR TCA 90 bp GTTCCTACGTGGCTTAAAAGAATTAAGCCAGAGGTAGTTTCCTGCCCCCGGCCCGGCTCTGGCTTTGCATaGTGCTGCGGTCGCCCACCT +
Preference number: 4 (lower is better)
Translates to: VPTWLKRIKPEVVSCPRPGSGFA*CCGRPP
Trigger: AGGTGGGCGACCGCAGCATCATGCAAAGCCAGAGCC...GGGCCGGGGGCAGGAAACTACCTCTGGCTTAATTCTTTTAAGCCACGTAGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp GTGGGGGCAGAAGGGGTCTGGATCAGCCTTGCTGCCAACCAACACAACACACGTTGTCCAGCTCCTCGCTaGAGATGGCGTTCTCACGTT +
Preference number: 4 (lower is better)
Translates to: VGAEGVWISLAANQHNTRCPAPR*RWRSHV
Trigger: AACGTGAGAACGCCATCTTCAGCGAGGAGCTGGACA...ACGTGTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACCCCTTCTGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp TGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATTGTCCAGCTCCTCGCTaGAGATGGCGTTCTCACGTT +
Preference number: 4 (lower is better)
Translates to: CVQGVSLNAKARESESRDCPAPR*RWRSHV
Trigger: AACGTGAGAACGCCATCTTCAGCGAGGAGCTGGACA...ATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR TCA 90 bp AGAGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAATGCAGGGCGTCTCACTaGATGCCAAAGCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: RALGQGHRDVRVHLSLKKCRASH*MPKPGS
Trigger: ACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCA...TTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp AGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAAGTTGCAGGGCGTCTCACTaGATGCCAAAGCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: SPWARPQGCQGPPIPQESCRASH*MPKPGS
Trigger: ACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCA...ACTTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp GTTCCTACGTGGCTTAAAAGAATTAAGCCAGAGGTAGTTTCCTGCCCCCGGCCCGGTGCCCCGCCCTGGTaGTTTCATCTGCCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: VPTWLKRIKPEVVSCPRPGAPPW*FHLPSA
Trigger: AGCTGACGGCAGATGAAATCACCAGGGCGGGGCACC...GGGCCGGGGGCAGGAAACTACCTCTGGCTTAATTCTTTTAAGCCACGTAGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp TCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGATCTGGGAGCACCGATCGCTTTGAAGCAGAGTCTCAACTaGAAAGGCCTCTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SAVSSLQRLRDLGAPIALKQSLN*KGLSLG
Trigger: CCCAAGAGAGAGGCCTTTTCAGTTGAGACTCTGCTT...CAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAGAGCTGACGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp GGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAATCACCTCGCAGCTGTaGCTCAGAAAGACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: GVSLNAKARESESRDRGRITSQL*LRKTSR
Trigger: TCTGCTGGTCTTTCTGAGTCACAGCTGCGAGGTGAT...TCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp AGAGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAAAGGCTCACAGGAGCCTaGGAAACAGACAAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: RALGQGHRDVRVHLSLKKRLTGA*ETDKRE
Trigger: CTCCCGCTTGTCTGTTTCTCAGGCTCCTGTGAGCCT...TTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp TCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGACTCTGGTCTCAGGACTaGGGCTCACAGGAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SLWLSVCAGRLTECQSQGLWSQD*GSQEPE
Trigger: CTCAGGCTCCTGTGAGCCTCAGTCCTGAGACCAGAG...TCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp TCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGGCATCAACATGGGGTaGGGTGGAGAGGGGCTATGG +
Preference number: 4 (lower is better)
Translates to: SLWLSVCAGRLTECQSQGGINMG*GGEGLW
Trigger: CCATAGCCCCTCTCCACCTCACCCCATGTTGATGCC...TCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GAGAGCACCGTGGAGACACCGCAACCCTGCTCCAGCTGGTCCTGCAATTGCCACCTGCTGAGCCTGTTTTaGCATATTTCCCTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: ESTVETPQPCSSWSCNCHLLSLF*HISLGG
Trigger: GCCTCCAAGGGAAATATGGCAAAACAGGCTCAGCAG...GTGGCAATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGTGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CGATCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGCCCATGGAGCCCTTCTaGCCTTTGGGTCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: RSLWLSVCAGRLTECQSQPMEPF*PLGPVW
Trigger: CCACACTGGACCCAAAGGGCAGAAGGGCTCCATGGG...CTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp CGATCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGACCCACACCTGGTCCTaGTCTCGCAGCTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: RSLWLSVCAGRLTECQSQTHTWS*SRSSSI
Trigger: GATGCTGGAGCTGCGAGAGCAGGACCAGGTGTGGGT...CTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp AGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAAGTGGGCGTCTCACTGAATaGCAAAGCCAGGGAGTCGGA +
Preference number: 4 (lower is better)
Translates to: SPWARPQGCQGPPIPQESGRLTE*QSQGVG
Trigger: TCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCC...ACTTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp TCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTCCTGGTGATTTCATCTaGCGTCAGCTCTCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: SLNAKARESESRDRGRGGPGDFI*RQLSPE
Trigger: CTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGG...ACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp GGCAGTGGGGGCAGAAGGGGTCTGGATCAGCCTTGCTGCCAACCAACACAACACGGTCTGGATCAGCCTTaGTGCCAACCAACACAACAC +
Preference number: 4 (lower is better)
Translates to: GSGGRRGLDQPCCQPTQHGLDQP*CQPTQH
Trigger: GTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACC...GTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACCCCTTCTGCCCCCACTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GGGCTGATTTGTGTGGGAGGCGGCACAGAAAGCCGATGCCAGGGTGGCAGGCATGCCCCTGGTCCTGACTaGGCCTGTATTTTTCATGTT +
Preference number: 4 (lower is better)
Translates to: GLICVGGGTESRCQGGRHAPGPD*ACIFHV
Trigger: AACATGAAAAATACAGGCCCAGTCAGGACCAGGGGC...ATGCCTGCCACCCTGGCATCGGCTTTCTGTGCCGCCTCCCACACAAATCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp CTCTCCAGAGGCTGCGGGATCTGGGAGCACCGATCGCTTTGGCTTTCTGTGTGTTTGCCATATTTCCCTTaGAGGCCTCGATCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: LSRGCGIWEHRSLWLSVCLPYFP*RPRSPR
Trigger: CCGCGGAGATCGAGGCCTCCAAGGGAAATATGGCAA...ACACACAGAAAGCCAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CCA 90 bp CAGAGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAATTGCCATATTTCCCTTaGAGGCCTCGATCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: QSPWARPQGCQGPPIPQELPYFP*RPRSPR
Trigger: CCGCGGAGATCGAGGCCTCCAAGGGAAATATGGCAA...TTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp AGAGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAAATTATTTCCAAGGACTaGAGCCGCGGTGCCGCACCC +
Preference number: 4 (lower is better)
Translates to: RALGQGHRDVRVHLSLKKIISKD*SRGAAP
Trigger: GGGTGCGGCACCGCGGCTCCAGTCCTTGGAAATAAT...TTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp TGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATGAGCAGAGCCACACATaGATGTACCAGGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: CVQGVSLNAKARESESRDEQSHT*MYQELC
Trigger: GCAGAGCTCCTGGTACATCCATGTGTGGCTCTGCTC...ATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp CGATCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGCCCCTCTCAGGCTACTaGTCAGAGGCCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: RSLWLSVCAGRLTECQSQPLSGY*SEAWMR
Trigger: CCTCATCCAGGCCTCTGACCAGTAGCCTGAGAGGGG...CTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp TGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGTCTGGTAGTAGTGGTTaGTGTGCATGGGCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: CAGRLTECQSQGVGVQGSSGSSG*CAWASS
Trigger: GGAAGAAGCCCATGCACAGCAACCACTACTACCAGA...CGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp TCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGGGCGTCTCACTGAATaGCAAAGCCAGGGAGTCGGA +
Preference number: 4 (lower is better)
Translates to: SLWLSVCAGRLTECQSQGGRLTE*QSQGVG
Trigger: TCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCC...TCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp CAGCTCCTGAGAGTGAATCCTGACACGGGTGATTGGGACGTGTACTTCCTCTTGCAGGAGCCCTTCGGCTaGTTCTACCAACCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: QLLRVNPDTGDWDVYFLLQEPFG*FYQPGA
Trigger: GGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTG...CAAGAGGAAGTACACGTCCCAATCACCCGTGTCAGGATTCACTCTCAGGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CGATCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGCCTCATAGAAACATCTaGAGGCCTGGGGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: RSLWLSVCAGRLTECQSQPHRNI*RPGGPR
Trigger: CCTGGGTCCCCCAGGCCTGCAGATGTTTCTATGAGG...CTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGATCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GTGGGGGCAGAAGGGGTCTGGATCAGCCTTGCTGCCAACCAACACAACACACGTGGTCTGGATCAGCCTTaGTGCCAACCAACACAACAC +
Preference number: 4 (lower is better)
Translates to: VGAEGVWISLAANQHNTRGLDQP*CQPTQH
Trigger: GTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACC...ACGTGTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACCCCTTCTGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp CGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTTGCCATATTTCCCTTaGAGGCCTCGATCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: RFGFLCVQGVSLNAKARELPYFP*RPRSPR
Trigger: CCGCGGAGATCGAGGCCTCCAAGGGAAATATGGCAA...CTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp TGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGTTTTCTGGAAAGAGCTaGGGGAGCTTAAGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: CAGRLTECQSQGVGVQGSFSGKS*GSLSSE
Trigger: CTCGCTGCTTAAGCTCCCCCAGCTCTTTCCAGAAAA...CGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GCGGGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTAAACAGCCTGAAAATTaGGGAGAGAAACAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: AGSLEDVCREGRGRSQRVKQPEN*GEKQPG
Trigger: TCCAGGCTGTTTCTCTCCCCAATTTTCAGGCTGTTT...AACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580474.1
CDS-3UTR GCA 90 bp CAGAGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAATCTGGTAGTAGTGGTTaGTGTGCATGGGCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: QSPWARPQGCQGPPIPQESGSSG*CAWASS
Trigger: GGAAGAAGCCCATGCACAGCAACCACTACTACCAGA...TTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CTCTCCAGAGGCTGCGGGATCTGGGAGCACCGATCGCTTTGGCTTTCTGTGTGTTCTGGTAGTAGTGGTTaGTGTGCATGGGCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LSRGCGIWEHRSLWLSVCSGSSG*CAWASS
Trigger: GGAAGAAGCCCATGCACAGCAACCACTACTACCAGA...ACACACAGAAAGCCAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR GCA 90 bp GGCGAGAGCACCGTGGAGACACCGCAACCCTGCTCCAGCTGGTCCTGCAATTGCGGGAGACTGCAGTGCTaGTTGAGGTGTTTTATAAAA +
Preference number: 4 (lower is better)
Translates to: GESTVETPQPCSSWSCNCGRLQC*LRCFIK
Trigger: TTTTATAAAACACCTCAAGCAGCACTGCAGTCTCCC...GCAATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGTGCTCTCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CGATCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGAGCTGGTCCTGCAATTaGCACAGGGGCTATTGCCTC +
Preference number: 4 (lower is better)
Translates to: RSLWLSVCAGRLTECQSQSWSCN*HRGYCL
Trigger: GAGGCAATAGCCCCTGTGGCAATTGCAGGACCAGCT...CTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CGATCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGTTTTTGCCCAGGCCCTaGAAACAAGGAGGCCGCATG +
Preference number: 4 (lower is better)
Translates to: RSLWLSVCAGRLTECQSQFLPRP*KQGGRM
Trigger: CATGCGGCCTCCTTGTTTGCAGGGCCTGGGCAAAAA...CTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGATCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339142.6
ENST00000581774.5
CDS-3UTR GCA 90 bp GGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGCTCAGTGTAAATTTTTaGCCAGGCCCTGCAAACAAG +
Preference number: 4 (lower is better)
Translates to: GRLTECQSQGVGVQGSGKLSVNF*PGPANK
Trigger: CTTGTTTGCAGGGCCTGGGCAAAAATTTACACTGAG...CTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339142.6
ENST00000581774.5
CDS-3UTR CCA 90 bp CGATCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGTTGCCATATTTCCCTTaGAGGCCTCGATCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: RSLWLSVCAGRLTECQSQLPYFP*RPRSPR
Trigger: CCGCGGAGATCGAGGCCTCCAAGGGAAATATGGCAA...CTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp CGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGCCTGACACGGGTGATTaGGACGTGTACTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: RFGFLCVQGVSLNAKAREPDTGD*DVYFLL
Trigger: CAAGAGGAAGTACACGTCCCAATCACCCGTGTCAGG...CTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GCAGAGCCACACATGGATGTACCAGGAGCTCTGCCCCTCATAGAAACATCTGCAGGGCTATGGGGTTCCTaGAGATCAGAGTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: AEPHMDVPGALPLIETSAGLWGS*RSESGV
Trigger: CACCCCAGACTCTGATCTCCAGGAACCCCATAGCCC...TGCAGATGTTTCTATGAGGGGCAGAGCTCCTGGTACATCCATGTGTGGCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp TCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTCAGTTACACAGCTTCTaGGAGGACAATCACTCTCAC +
Preference number: 4 (lower is better)
Translates to: SLNAKARESESRDRGRGGQLHSF*EDNHSH
Trigger: GTGAGAGTGATTGTCCTCCCAGAAGCTGTGTAACTG...ACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580474.1
CDS-3UTR TCA 90 bp AGAGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAAAAGCAGAGTCTCAACTaGAAAGGCCTCTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: RALGQGHRDVRVHLSLKKKQSLN*KGLSLG
Trigger: CCCAAGAGAGAGGCCTTTTCAGTTGAGACTCTGCTT...TTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGGGAGACTGCAGTGCTaGTTGAGGTGTTTTATAAAA +
Preference number: 4 (lower is better)
Translates to: GSLEDVCREGRGRSQRVLGRLQC*LRCFIK
Trigger: TTTTATAAAACACCTCAAGCAGCACTGCAGTCTCCC...GAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp CGATCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGCCTGACACGGGTGATTaGGACGTGTACTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: RSLWLSVCAGRLTECQSQPDTGD*DVYFLL
Trigger: CAAGAGGAAGTACACGTCCCAATCACCCGTGTCAGG...CTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GTTCCTACGTGGCTTAAAAGAATTAAGCCAGAGGTAGTTTCCTGCCCCCGGCCCTGCCACTGTTGTTGTTaGGTGGACTCTAGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: VPTWLKRIKPEVVSCPRPCHCCC*VDSRGL
Trigger: GAGGCCCCTAGAGTCCACCCAACAACAACAGTGGCA...GGGCCGGGGGCAGGAAACTACCTCTGGCTTAATTCTTTTAAGCCACGTAGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392445.6
CDS-3UTR TCA 90 bp TCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAAAGCAGAGTCTCAACTaGAAAGGCCTCTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SLWLSVCAGRLTECQSQGKQSLN*KGLSLG
Trigger: CCCAAGAGAGAGGCCTTTTCAGTTGAGACTCTGCTT...TCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp CAGCTCCTGAGAGTGAATCCTGACACGGGTGATTGGGACGTGTACTTCCTCTTGATCACCTCGCAGCTGTaGCTCAGAAAGACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: QLLRVNPDTGDWDVYFLLITSQL*LRKTSR
Trigger: TCTGCTGGTCTTTCTGAGTCACAGCTGCGAGGTGAT...CAAGAGGAAGTACACGTCCCAATCACCCGTGTCAGGATTCACTCTCAGGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp GGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGCACAGAGAAACAGCCTaGAAATTGGGGAGAGAAACA +
Preference number: 4 (lower is better)
Translates to: GFLCVQGVSLNAKARESEHRETA*KLGRET
Trigger: TGTTTCTCTCCCCAATTTTCAGGCTGTTTCTCTGTG...CTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580474.1
CDS-3UTR GCA 90 bp TCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGATCTGGTAGTAGTGGTTaGTGTGCATGGGCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SLWLSVCAGRLTECQSQGSGSSG*CAWASS
Trigger: GGAAGAAGCCCATGCACAGCAACCACTACTACCAGA...TCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp CGATCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGTCTGGTAGTAGTGGTTaGTGTGCATGGGCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RSLWLSVCAGRLTECQSQSGSSG*CAWASS
Trigger: GGAAGAAGCCCATGCACAGCAACCACTACTACCAGA...CTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR GCA 90 bp GCAGAGCCACACATGGATGTACCAGGAGCTCTGCCCCTCATAGAAACATCTGCACCTGGTGATTTCATCTaGCGTCAGCTCTCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: AEPHMDVPGALPLIETSAPGDFI*RQLSPE
Trigger: CTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGG...TGCAGATGTTTCTATGAGGGGCAGAGCTCCTGGTACATCCATGTGTGGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp GCAGAGCCACACATGGATGTACCAGGAGCTCTGCCCCTCATAGAAACATCTGCAGGTCTGGATCAGCCTTaGTGCCAACCAACACAACAC +
Preference number: 4 (lower is better)
Translates to: AEPHMDVPGALPLIETSAGLDQP*CQPTQH
Trigger: GTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACC...TGCAGATGTTTCTATGAGGGGCAGAGCTCCTGGTACATCCATGTGTGGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp TCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGCCCCTGGTCCTGACTaGGCCTGTATTTTTCATGTT +
Preference number: 4 (lower is better)
Translates to: SLWLSVCAGRLTECQSQGAPGPD*ACIFHV
Trigger: AACATGAAAAATACAGGCCCAGTCAGGACCAGGGGC...TCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp CGATCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGCCCCTGGTCCTGACTaGGCCTGTATTTTTCATGTT +
Preference number: 4 (lower is better)
Translates to: RSLWLSVCAGRLTECQSQAPGPD*ACIFHV
Trigger: AACATGAAAAATACAGGCCCAGTCAGGACCAGGGGC...CTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGATCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CCA 90 bp CGATCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGTTTTCTGGAAAGAGCTaGGGGAGCTTAAGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: RSLWLSVCAGRLTECQSQFSGKS*GSLSSE
Trigger: CTCGCTGCTTAAGCTCCCCCAGCTCTTTCCAGAAAA...CTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGATCTGGGAGAGTTTAATGTTTTCTaGAAAGAGCTGGGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: ALVISSAVSSLQRLRDLGEFNVF*KELGEL
Trigger: AAGCTCCCCCAGCTCTTTCCAGAAAACATTAAACTC...TCCCAGATCCCGCAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp TCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGAGTTTAATGTTTTCTaGAAAGAGCTGGGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: SLNAKARESESRDRGRGGEFNVF*KELGEL
Trigger: AAGCTCCCCCAGCTCTTTCCAGAAAACATTAAACTC...ACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp AGAGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAACTCAGTGTAAATTTTTaGCCAGGCCCTGCAAACAAG +
Preference number: 4 (lower is better)
Translates to: RALGQGHRDVRVHLSLKKLSVNF*PGPANK
Trigger: CTTGTTTGCAGGGCCTGGGCAAAAATTTACACTGAG...TTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339142.6
CDS-3UTR CCA 90 bp TTTTCTTTGTCCTCCACGGTTTACTTTGCTCCTTTTGAGACCTTTAGAATTTGCTGGGAGGCTGACGCCTaGGGCCCCAGCCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: FSLSSTVYFAPFETFRICWEADA*GPSPHH
Trigger: GTGATGGGGGCTGGGGCCCCAGGCGTCAGCCTCCCA...GCAAATTCTAAAGGTCTCAAAAGGAGCAAAGTAAACCGTGGAGGACAAAGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp AGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAAGTGGGAGACTGCAGTGCTaGTTGAGGTGTTTTATAAAA +
Preference number: 4 (lower is better)
Translates to: SPWARPQGCQGPPIPQESGRLQC*LRCFIK
Trigger: TTTTATAAAACACCTCAAGCAGCACTGCAGTCTCCC...ACTTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGGGGAGACTGCAGTGCTaGTTGAGGTGTTTTATAAAA +
Preference number: 4 (lower is better)
Translates to: RFGFLCVQGVSLNAKAREGRLQC*LRCFIK
Trigger: TTTTATAAAACACCTCAAGCAGCACTGCAGTCTCCC...CTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp AGAGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAAGAGTTTAATGTTTTCTaGAAAGAGCTGGGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: RALGQGHRDVRVHLSLKKEFNVF*KELGEL
Trigger: AAGCTCCCCCAGCTCTTTCCAGAAAACATTAAACTC...TTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp CAGCTCCTGAGAGTGAATCCTGACACGGGTGATTGGGACGTGTACTTCCTCTTGGGGAGACTGCAGTGCTaGTTGAGGTGTTTTATAAAA +
Preference number: 4 (lower is better)
Translates to: QLLRVNPDTGDWDVYFLLGRLQC*LRCFIK
Trigger: TTTTATAAAACACCTCAAGCAGCACTGCAGTCTCCC...CAAGAGGAAGTACACGTCCCAATCACCCGTGTCAGGATTCACTCTCAGGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp CTCTCCAGAGGCTGCGGGATCTGGGAGCACCGATCGCTTTGGCTTTCTGTGTGTAAGAAAGTTCCTACGTaGCTTAAAAGAATTAAGCCA +
Preference number: 4 (lower is better)
Translates to: LSRGCGIWEHRSLWLSVCKKVPT*LKRIKP
Trigger: TGGCTTAATTCTTTTAAGCCACGTAGGAACTTTCTT...ACACACAGAAAGCCAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp TGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATAAGAAAGTTCCTACGTaGCTTAAAAGAATTAAGCCA +
Preference number: 4 (lower is better)
Translates to: CVQGVSLNAKARESESRDKKVPT*LKRIKP
Trigger: TGGCTTAATTCTTTTAAGCCACGTAGGAACTTTCTT...ATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp GGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGAAGAAAGTTCCTACGTaGCTTAAAAGAATTAAGCCA +
Preference number: 4 (lower is better)
Translates to: GFLCVQGVSLNAKARESEKKVPT*LKRIKP
Trigger: TGGCTTAATTCTTTTAAGCCACGTAGGAACTTTCTT...CTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp TTTTCTTTGTCCTCCACGGTTTACTTTGCTCCTTTTGAGACCTTTAGAATTTGCCAGGAGCCCTTCGGCTaGTTCTACCAACCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: FSLSSTVYFAPFETFRICQEPFG*FYQPGA
Trigger: GGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTG...GCAAATTCTAAAGGTCTCAAAAGGAGCAAAGTAAACCGTGGAGGACAAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp TTTTCTTTGTCCTCCACGGTTTACTTTGCTCCTTTTGAGACCTTTAGAATTTGCTGCCACAGGGGCTATTaGCTCTCCTGCCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: FSLSSTVYFAPFETFRICCHRGY*LSCHPA
Trigger: AGCTGGGTGGCAGGAGAGGCAATAGCCCCTGTGGCA...GCAAATTCTAAAGGTCTCAAAAGGAGCAAAGTAAACCGTGGAGGACAAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp TTTTCTTTGTCCTCCACGGTTTACTTTGCTCCTTTTGAGACCTTTAGAATTTGCGAGACACCGCAACCCTaGTCCAGCTGGTCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: FSLSSTVYFAPFETFRICETPQP*SSWSCN
Trigger: ATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTC...GCAAATTCTAAAGGTCTCAAAAGGAGCAAAGTAAACCGTGGAGGACAAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR TCA 90 bp TTTTCTTTGTCCTCCACGGTTTACTTTGCTCCTTTTGAGACCTTTAGAATTTGCTGTCCAGCTCCTCGCTaGAGATGGCGTTCTCACGTT +
Preference number: 4 (lower is better)
Translates to: FSLSSTVYFAPFETFRICCPAPR*RWRSHV
Trigger: AACGTGAGAACGCCATCTTCAGCGAGGAGCTGGACA...GCAAATTCTAAAGGTCTCAAAAGGAGCAAAGTAAACCGTGGAGGACAAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp TTTTCTTTGTCCTCCACGGTTTACTTTGCTCCTTTTGAGACCTTTAGAATTTGCTGCTCCAGCTGGTCCTaGAATTGCCACAGGGGCTAT +
Preference number: 4 (lower is better)
Translates to: FSLSSTVYFAPFETFRICCSSWS*NCHRGY
Trigger: ATAGCCCCTGTGGCAATTGCAGGACCAGCTGGAGCA...GCAAATTCTAAAGGTCTCAAAAGGAGCAAAGTAAACCGTGGAGGACAAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR GCA 90 bp TTTTCTTTGTCCTCCACGGTTTACTTTGCTCCTTTTGAGACCTTTAGAATTTGCTCTGGTAGTAGTGGTTaGTGTGCATGGGCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: FSLSSTVYFAPFETFRICSGSSG*CAWASS
Trigger: GGAAGAAGCCCATGCACAGCAACCACTACTACCAGA...GCAAATTCTAAAGGTCTCAAAAGGAGCAAAGTAAACCGTGGAGGACAAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CCA 90 bp TTTTCTTTGTCCTCCACGGTTTACTTTGCTCCTTTTGAGACCTTTAGAATTTGCGAGTTTAATGTTTTCTaGAAAGAGCTGGGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: FSLSSTVYFAPFETFRICEFNVF*KELGEL
Trigger: AAGCTCCCCCAGCTCTTTCCAGAAAACATTAAACTC...GCAAATTCTAAAGGTCTCAAAAGGAGCAAAGTAAACCGTGGAGGACAAAGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp GCCGCACCCTGGGACGCCCTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTCCTTCTGGGGCTGATTaGTGTGGGAGGCGGCACAGA +
Preference number: 5 (lower is better)
Translates to: AAPWDALPPPASRRAGSLPSGAD*CGRRHR
Trigger: TCTGTGCCGCCTCCCACACAAATCAGCCCCAGAAGG...AAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAGGGCGTCCCAGGGTGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp CCTGGGACGCCCTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGGCCGTGCGGGGTCACTaGAGGATGTGTGCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: PGTPCRHPRLAVRGHLRMAVRGH*RMCAER
Trigger: CCTCTCTGCACACATCCTCAAGTGACCCCGCACGGC...CATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAGGGCGTCCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CAA 90 bp CCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCAGGGCCTTCGGGGCGCTaGGCCAGCCCAGCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: PKPGSRSPGIGEEAVGSAGPSGR*ASPASR
Trigger: TCTGGAGGCTGGGCTGGCCAAGCGCCCCGAAGGCCC...TGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339142.6
ENST00000581774.5
CDS-3UTR CAA 90 bp AGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCGAGCCCTTCTGCCCTTaGGGTCCAGTGTGGCCCCTG +
Preference number: 5 (lower is better)
Translates to: RAAEGPRGFSRVPRPGDFEPFCP*GPVWPL
Trigger: CAGGGGCCACACTGGACCCAAAGGGCAGAAGGGCTC...GAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CAA 90 bp GGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGGGGAGCCCTTCTGCCCTTaGGGTCCAGTGTGGCCCCTG +
Preference number: 5 (lower is better)
Translates to: GVGVQGSGKRRWGQHSAGEPFCP*GPVWPL
Trigger: CAGGGGCCACACTGGACCCAAAGGGCAGAAGGGCTC...CCCTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS CCA 90 bp CAAGGAGGCCGCATGAGCCGTCAGGCATCGGGCCTTCGGGGCGCTTaGCCAGCCCAGCCTCCAGAGCTCCGATTCCGTCCCAGTGGAAAC +
Preference number: 5 (lower is better)
Translates to: QGGRMSRQASGLRGA*PAQPPELRFRPSGN
Trigger: GTTTCCACTGGGACGGAATCGGAGCTCTGGAGGCTGGGCTGGCCAAGCGCCCCGAAGGCCCGATGCCTGACGGCTCATGCGGCCTCCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339142.6
ENST00000581774.5
CDS-3UTR CAA 90 bp CTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGTGTGCAGAGAGGAGCCCTTCTGCCCTTaGGGTCCAGTGTGGCCCCTG +
Preference number: 5 (lower is better)
Translates to: LPPPASRRAGSLEDVCREEPFCP*GPVWPL
Trigger: CAGGGGCCACACTGGACCCAAAGGGCAGAAGGGCTC...CTCTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CAA 90 bp CGCGGGTGCCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGACAATGCCCACTGCCTaGCCCCAGGCTGGGCGAGGC +
Preference number: 5 (lower is better)
Translates to: RGCPALVISSAVSSLQRLTMPTA*PQAGRG
Trigger: GCCTCGCCCAGCCTGGGGCAAGGCAGTGGGCATTGT...CAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCACCCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354124.7
CDS-3UTR CAA 90 bp AAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGACAATGCCCACTGCCTaGCCCCAGGCTGGGCGAGGC +
Preference number: 5 (lower is better)
Translates to: KPGSRSPGIGEEAVGSAQTMPTA*PQAGRG
Trigger: GCCTCGCCCAGCCTGGGGCAAGGCAGTGGGCATTGT...CTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354124.7
ENST00000578229.5
CDS-3UTR CAA 90 bp TGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGGAGCCCTTCTGCCCTTaGGGTCCAGTGTGGCCCCTG +
Preference number: 5 (lower is better)
Translates to: CQSQGVGVQGSGKRRWGQEPFCP*GPVWPL
Trigger: CAGGGGCCACACTGGACCCAAAGGGCAGAAGGGCTC...CTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CAA 90 bp AGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGGCCGTGCGGGGTCACTaGAGGATGTGTGCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: RESESRDRGRGGGVSTAQAVRGH*RMCAER
Trigger: CCTCTCTGCACACATCCTCAAGTGACCCCGCACGGC...CTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CAA 90 bp GGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGGGGAAAAGGCCTCTCTCTaGGGAGCCAGCAGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: GVGVQGSGKRRWGQHSAGEKASL*GASRLA
Trigger: AGCCAGCCTGCTGGCTCCCAAGAGAGAGGCCTTTTC...CCCTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp AGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCCCTTCTGGGGCTGATTaGTGTGGGAGGCGGCACAGA +
Preference number: 5 (lower is better)
Translates to: RAAEGPRGFSRVPRPGDFPSGAD*CGRRHR
Trigger: TCTGTGCCGCCTCCCACACAAATCAGCCCCAGAAGG...GAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS CCA 90 bp AAGATTTCCTTGAGTAGAGCAGCTGTCCTCAGCTCACCTCCCAGCTaGAAGGCCTCGGGCGGCAGGCTTGCCCCTGCTCCGTCCCGCCGG +
Preference number: 5 (lower is better)
Translates to: KISLSRAAVLSSPPS*KASGGRLAPAPSRR
Trigger: CCGGCGGGACGGAGCAGGGGCAAGCCTGCCGCCCGAGGCCTTCCAGCTGGGAGGTGAGCTGAGGACAGCTGCTCTACTCAAGGAAATCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339142.6
CDS-3UTR CAA 90 bp AGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTGGAGCACCGATCGCTTaGGCTTTCTGTGTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: RGPRKVPEGSRGCPALVIGAPIA*AFCVCR
Trigger: CCTGCACACACAGAAAGCCAAAGCGATCGGTGCTCC...AATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CAA 90 bp AGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCGGAGCACCGATCGCTTaGGCTTTCTGTGTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: RAAEGPRGFSRVPRPGDFGAPIA*AFCVCR
Trigger: CCTGCACACACAGAAAGCCAAAGCGATCGGTGCTCC...GAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CAA 90 bp CTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGTGTGCAGAGAGGAAAAGGCCTCTCTCTaGGGAGCCAGCAGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LPPPASRRAGSLEDVCREEKASL*GASRLA
Trigger: AGCCAGCCTGCTGGCTCCCAAGAGAGAGGCCTTTTC...CTCTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp CGCGGGTGCCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGAGACCAGCAGAGCCCTaGGGCAAGGCCACAGGGATG +
Preference number: 5 (lower is better)
Translates to: RGCPALVISSAVSSLQRLRPAEP*GKATGM
Trigger: CATCCCTGTGGCCTTGCCCAAGGGCTCTGCTGGTCT...CAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCACCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp CCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCAGACCAGCAGAGCCCTaGGGCAAGGCCACAGGGATG +
Preference number: 5 (lower is better)
Translates to: PRGFSRVPRPGDFICRQLRPAEP*GKATGM
Trigger: CATCCCTGTGGCCTTGCCCAAGGGCTCTGCTGGTCT...GAGCTGACGGCAGATGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp CAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCACCTTCTGGGGCTGATTaGTGTGGGAGGCGGCACAGA +
Preference number: 5 (lower is better)
Translates to: QGVGVQGSGKRRWGQHSAPSGAD*CGRRHR
Trigger: TCTGTGCCGCCTCCCACACAAATCAGCCCCAGAAGG...TGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS GCA 90 bp GCAGGCGAGGCGCCCAAAAGCCACTCCACAGAGGCCCTGACTGCATaGGTCAACCCCTCCTGTGAGTACAGGGAGAAAGGCTGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: AGEAPKSHSTEALTA*VNPSCEYREKGCQA
Trigger: GGCCTGGCAGCCTTTCTCCCTGTACTCACAGGAGGGGTTGACGCATGCAGTCAGGGCCTCTGTGGAGTGGCTTTTGGGCGCCTCGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578229.5
CDS-3UTR CAA 90 bp GGGCTGATTTGTGTGGGAGGCGGCACAGAAAGCCGATGCCAGGGTGGCAGGCATGAGCCCTTCTGCCCTTaGGGTCCAGTGTGGCCCCTG +
Preference number: 5 (lower is better)
Translates to: GLICVGGGTESRCQGGRHEPFCP*GPVWPL
Trigger: CAGGGGCCACACTGGACCCAAAGGGCAGAAGGGCTC...ATGCCTGCCACCCTGGCATCGGCTTTCTGTGCCGCCTCCCACACAAATCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp GGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGAGTCTGACCCGCGGAGCACCGATCGCTTaGGCTTTCTGTGTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: GALLPGTPTATRLQSLTRGAPIA*AFCVCR
Trigger: CCTGCACACACAGAAAGCCAAAGCGATCGGTGCTCC...GCGGGTCAGACTCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp GAGTGTGGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGAGTCTGAGACCAGCAGAGCCCTaGGGCAAGGCCACAGGGATG +
Preference number: 5 (lower is better)
Translates to: ECGALLPGTPTATRLQSLRPAEP*GKATGM
Trigger: CATCCCTGTGGCCTTGCCCAAGGGCTCTGCTGGTCT...CAGACTCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp CGGGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCAGACCAGCAGAGCCCTaGGGCAAGGCCACAGGGATG +
Preference number: 5 (lower is better)
Translates to: RGHLRMCAERAAEGPRGFRPAEP*GKATGM
Trigger: CATCCCTGTGGCCTTGCCCAAGGGCTCTGCTGGTCT...GAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp GGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGCGTCGCTCGGGGGCTTaGGAGCCTCTGCGGGGGATG +
Preference number: 5 (lower is better)
Translates to: GFLCVQGVSLNAKARESERRSGA*EPLRGM
Trigger: CATCCCCCGCAGAGGCTCCAAAGCCCCCGAGCGACG...CTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583904.5
CDS TCA 90 bp CTCAGTGTAAATTTTTGCCCAGGCCCTGCAAACAAGGAGGCCGCATaGGCCGTCAGGCATCGGGCCTTCGGGGCGCTTGGCCAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: LSVNFCPGPANKEAA*AVRHRAFGALGQPS
Trigger: GCTGGGCTGGCCAAGCGCCCCGAAGGCCCGATGCCTGACGGCTCATGCGGCCTCCTTGTTTGCAGGGCCTGGGCAAAAATTTACACTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339142.6
ENST00000581774.5
CDS GCA 90 bp CAGCTCACCTCCCAGCTGGAAGGCCTCGGGCGGCAGGCTTGCCCCTaGTTTGAGAACCGTGTGAGAGAGAAGAGGCACCAACAGCTGTCC +
Preference number: 5 (lower is better)
Translates to: QLTSQLEGLGRQACP*FENRVREKRHQQLS
Trigger: GGACAGCTGTTGGTGCCTCTTCTCTCTCACACGGTTCTCAAAGCAGGGGCAAGCCTGCCGCCCGAGGCCTTCCAGCTGGGAGGTGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581774.5
CDS GCA 90 bp GGCAGTACGCCAGCAAGAGTCCCTGTCCACGGGAGCCCATCTTCCTaGCGGGCCCTGGTGGGAAAGAAACACACAGGGAAGGCACCGAGT +
Preference number: 5 (lower is better)
Translates to: GSTPARVPVHGSPSS*RALVGKKHTGKAPS
Trigger: ACTCGGTGCCTTCCCTGTGTGTTTCTTTCCCACCAGGGCCCGGCAGGAAGATGGGCTCCCGTGGACAGGGACTCTTGCTGGCGTACTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580474.1
CDS-3UTR CAA 90 bp CAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCATTTGCCATATTTCCCTaGGAGGCCTCGATCTCCGCG +
Preference number: 5 (lower is better)
Translates to: QGVGVQGSGKRRWGQHSAFAIFP*EASISA
Trigger: CGCGGAGATCGAGGCCTCCAAGGGAAATATGGCAAA...TGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CAA 90 bp ATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGCTGAGCCTGTTTaGCCATATTTCCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: MCAERAAEGPRGFSRVPRPAEPV*PYFPWR
Trigger: CCTCCAAGGGAAATATGGCAAAACAGGCTCAGCAGG...GCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CAA 90 bp GGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCGCAGGGCCTGCTGAGCCTGTTTaGCCATATTTCCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: GVGVQGSGKRRWGQHSAGPAEPV*PYFPWR
Trigger: CCTCCAAGGGAAATATGGCAAAACAGGCTCAGCAGG...CCCTGCGCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CAA 90 bp TCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGAGCCCTTCTGCCCTTaGGGTCCAGTGTGGCCCCTG +
Preference number: 5 (lower is better)
Translates to: SLNAKARESESRDRGRGGEPFCP*GPVWPL
Trigger: CAGGGGCCACACTGGACCCAAAGGGCAGAAGGGCTC...ACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CAA 90 bp TGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGAGCCCTTCTGCCCTTaGGGTCCAGTGTGGCCCCTG +
Preference number: 5 (lower is better)
Translates to: CAGRLTECQSQGVGVQGSEPFCP*GPVWPL
Trigger: CAGGGGCCACACTGGACCCAAAGGGCAGAAGGGCTC...CGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CAA 90 bp AAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGGGAGCACCGATCGCTTaGGCTTTCTGTGTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: KPGSRSPGIGEEAVGSAQGAPIA*AFCVCR
Trigger: CCTGCACACACAGAAAGCCAAAGCGATCGGTGCTCC...CTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CAA 90 bp CCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCAGGAGCACCGATCGCTTaGGCTTTCTGTGTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: PKPGSRSPGIGEEAVGSAGAPIA*AFCVCR
Trigger: CCTGCACACACAGAAAGCCAAAGCGATCGGTGCTCC...TGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CAA 90 bp GAGTGTGGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGAGTCTGGAAAAGGCCTCTCTCTaGGGAGCCAGCAGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: ECGALLPGTPTATRLQSLEKASL*GASRLA
Trigger: AGCCAGCCTGCTGGCTCCCAAGAGAGAGGCCTTTTC...CAGACTCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp GGCGAGAGCACCGTGGAGACACCGCAACCCTGCTCCAGCTGGTCCTGCAATTGCGAAAAGGCCTCTCTCTaGGGAGCCAGCAGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: GESTVETPQPCSSWSCNCEKASL*GASRLA
Trigger: AGCCAGCCTGCTGGCTCCCAAGAGAGAGGCCTTTTC...GCAATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGTGCTCTCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp GAGTGTGGCGCTCTGCTTCCGGGCACGCCCACAGCAACTCGGCTTCAGAGTCTGCCTTCTGGGGCTGATTaGTGTGGGAGGCGGCACAGA +
Preference number: 5 (lower is better)
Translates to: ECGALLPGTPTATRLQSLPSGAD*CGRRHR
Trigger: TCTGTGCCGCCTCCCACACAAATCAGCCCCAGAAGG...CAGACTCTGAAGCCGAGTTGCTGTGGGCGTGCCCGGAAGCAGAGCGCCACACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp GTGGGGGCAGAAGGGGTCTGGATCAGCCTTGCTGCCAACCAACACAACACACGTTTCCCTCCTCCCCGGTaGGCAGGTGCTGGAGAGGCC +
Preference number: 5 (lower is better)
Translates to: VGAEGVWISLAANQHNTRFPPPR*AGAGEA
Trigger: GGCCTCTCCAGCACCTGCCAACCGGGGAGGAGGGAA...ACGTGTGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACCCCTTCTGCCCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000392445.6
CDS GCA 90 bp TGTCCTCAGCTCACCTCCCAGCTGGAAGGCCTCGGGCGGCAGGCTTaGCCCTGCTTTGAGAACCGTGTGAGAGAGAAGAGGCACCAACAG +
Preference number: 5 (lower is better)
Translates to: CPQLTSQLEGLGRQA*PCFENRVREKRHQQ
Trigger: CTGTTGGTGCCTCTTCTCTCTCACACGGTTCTCAAAGCAGGGGCAAGCCTGCCGCCCGAGGCCTTCCAGCTGGGAGGTGAGCTGAGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581774.5
CDS-3UTR CAA 90 bp GCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCTTCAAGATAGTGATGTaGATCTGGGGCACGGCGGTC +
Preference number: 5 (lower is better)
Translates to: AKARESESRDRGRGGGVSFKIVM*IWGTAV
Trigger: GACCGCCGTGCCCCAGATCAACATCACTATCTTGAA...GCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CAA 90 bp CGCGGGTGCCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGTTTGCCATATTTCCCTaGGAGGCCTCGATCTCCGCG +
Preference number: 5 (lower is better)
Translates to: RGCPALVISSAVSSLQRLFAIFP*EASISA
Trigger: CGCGGAGATCGAGGCCTCCAAGGGAAATATGGCAAA...CAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCACCCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CAA 90 bp TGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATGAGCCCTTCTGCCCTTaGGGTCCAGTGTGGCCCCTG +
Preference number: 5 (lower is better)
Translates to: CVQGVSLNAKARESESRDEPFCP*GPVWPL
Trigger: CAGGGGCCACACTGGACCCAAAGGGCAGAAGGGCTC...ATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CAA 90 bp CGGGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCGGAGCACCGATCGCTTaGGCTTTCTGTGTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: RGHLRMCAERAAEGPRGFGAPIA*AFCVCR
Trigger: CCTGCACACACAGAAAGCCAAAGCGATCGGTGCTCC...GAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CAA 90 bp AGCGGGGGTTTGGGGGCCCAGCGGGTAGCAAGAGTGACCCTGGGCATCAACATGGGAGCACCGATCGCTTaGGCTTTCTGTGTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: SGGLGAQRVARVTLGINMGAPIA*AFCVCR
Trigger: CCTGCACACACAGAAAGCCAAAGCGATCGGTGCTCC...CATGTTGATGCCCAGGGTCACTCTTGCTACCCGCTGGGCCCCCAAACCCCCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp CGCGGGTGCCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGGGGTCTGGATCAGCCTaGCTGCCAACCAACACAACA +
Preference number: 5 (lower is better)
Translates to: RGCPALVISSAVSSLQRLGSGSA*LPTNTT
Trigger: TGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACCC...CAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCACCCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp GTTCCTACGTGGCTTAAAAGAATTAAGCCAGAGGTAGTTTCCTGCCCCCGGCCCGGGCCTTCGGGGCGCTaGGCCAGCCCAGCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: VPTWLKRIKPEVVSCPRPGPSGR*ASPASR
Trigger: TCTGGAGGCTGGGCTGGCCAAGCGCCCCGAAGGCCC...GGGCCGGGGGCAGGAAACTACCTCTGGCTTAATTCTTTTAAGCCACGTAGGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339142.6
CDS-3UTR CAA 90 bp GGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGTCCCATCTCCCTGTCTaGGTTCCCTCCTCCCCGGTT +
Preference number: 5 (lower is better)
Translates to: GRLTECQSQGVGVQGSGKSHLPV*VPSSPV
Trigger: AACCGGGGAGGAGGGAACCAAGACAGGGAGATGGGA...CTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392445.6
CDS TCA 90 bp GGGTCACAGCAGCGCAAGCACCGGGAAGCAGGGAGCCCCTGGTCCTaGCTGGGCCTGTATTTTTCATGTTGTTCTTCAGCCCTCCGTCCC +
Preference number: 5 (lower is better)
Translates to: GSQQRKHREAGSPWS*LGLYFSCCSSALRP
Trigger: GGGACGGAGGGCTGAAGAACAACATGAAAAATACAGGCCCAGTCAGGACCAGGGGCTCCCTGCTTCCCGGTGCTTGCGCTGCTGTGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311661.4
CDS TCA 90 bp AAGCAATGGGCTCTGCGGCCAGACCGACGGCTCGCTCTGAGCAAATaGACTCCAGATGTCGGGGCCAGCTGGGGATCTAGGCTGCAAGTG +
Preference number: 5 (lower is better)
Translates to: KQWALRPDRRLALSK*TPDVGASWGSRLQV
Trigger: CACTTGCAGCCTAGATCCCCAGCTGGCCCCGACATCTGGAGTTCATTTGCTCAGAGCGAGCCGTCGGTCTGGCCGCAGAGCCCATTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582625.1
CDS CCA 90 bp TCTCCGCGGTCACCCTTCTCCCCTTTCAAGATAGTGATGTTGATCTaGGGCACGGCGGTCGCCGGGTACATGGAGGTACCGGGGTCACAG +
Preference number: 5 (lower is better)
Translates to: SPRSPFSPFKIVMLI*GTAVAGYMEVPGSQ
Trigger: CTGTGACCCCGGTACCTCCATGTACCCGGCGACCGCCGTGCCCCAGATCAACATCACTATCTTGAAAGGGGAGAAGGGTGACCGCGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS CCA 90 bp AAGCCCCAAAGCAAAGGGCCTAGAAGCCTGGCGTCCACATACAACTaGAGGGACGAGACCCCGAGTAGCCTCTGGGCTCCCTCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: KPQSKGPRSLASTYN*RDETPSSLWAPSPA
Trigger: AGCAGGAGAGGGAGCCCAGAGGCTACTCGGGGTCTCGTCCCTCCAGTTGTATGTGGACGCCAGGCTTCTAGGCCCTTTGCTTTGGGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582625.1
CDS CCA 90 bp GGCTGTGCAGGGTTATCTGCCGTGTGCAGGACCGGAGCGAGCAGGTaGCATTTCAGAAAGCAGGCTGGGGGACCAAGCCCCAAAGCAAAG +
Preference number: 5 (lower is better)
Translates to: GCAGLSAVCRTGASR*HFRKQAGGPSPKAK
Trigger: CTTTGCTTTGGGGCTTGGTCCCCCAGCCTGCTTTCTGAAATGCCACCTGCTCGCTCCGGTCCTGCACACGGCAGATAACCCTGCACAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582625.1
CDS CCA 90 bp CAGCAAGAGTCCCTGTCCACGGGAGCCCATCTTCCTGCCGGGCCCTaGTGGGAAAGAAACACACAGGGAAGGCACCGAGTTAGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: QQESLSTGAHLPAGP*WERNTQGRHRVRKE
Trigger: CTCCTTCCTAACTCGGTGCCTTCCCTGTGTGTTTCTTTCCCACCAGGGCCCGGCAGGAAGATGGGCTCCCGTGGACAGGGACTCTTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580474.1
CDS-3UTR CAA 90 bp GGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTTCACCTGTATTTTTCATGTaGTTCTTCAGCCCTCCGTCC +
Preference number: 5 (lower is better)
Translates to: GPRKVPEGSRGCPALVISPVFFM*FFSPPS
Trigger: GGACGGAGGGCTGAAGAACAACATGAAAAATACAGG...TGAAATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311661.4
CDS-3UTR CAA 90 bp CTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGTTTGCCATATTTCCCTaGGAGGCCTCGATCTCCGCG +
Preference number: 5 (lower is better)
Translates to: LNAKARESESRDRGRGGGFAIFP*EASISA
Trigger: CGCGGAGATCGAGGCCTCCAAGGGAAATATGGCAAA...CCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CAA 90 bp GGCGAGAGCACCGTGGAGACACCGCAACCCTGCTCCAGCTGGTCCTGCAATTGCTTTGCCATATTTCCCTaGGAGGCCTCGATCTCCGCG +
Preference number: 5 (lower is better)
Translates to: GESTVETPQPCSSWSCNCFAIFP*EASISA
Trigger: CGCGGAGATCGAGGCCTCCAAGGGAAATATGGCAAA...GCAATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGTGCTCTCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp GCGGGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTTTTGCCATATTTCCCTaGGAGGCCTCGATCTCCGCG +
Preference number: 5 (lower is better)
Translates to: AGSLEDVCREGRGRSQRVFAIFP*EASISA
Trigger: CGCGGAGATCGAGGCCTCCAAGGGAAATATGGCAAA...AACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CAA 90 bp ATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCATTTGCCATATTTCCCTaGGAGGCCTCGATCTCCGCG +
Preference number: 5 (lower is better)
Translates to: MPKPGSRSPGIGEEAVGSFAIFP*EASISA
Trigger: CGCGGAGATCGAGGCCTCCAAGGGAAATATGGCAAA...TGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CAA 90 bp CGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGGAGCCCTTCTGCCCTTaGGGTCCAGTGTGGCCCCTG +
Preference number: 5 (lower is better)
Translates to: RFGFLCVQGVSLNAKAREEPFCP*GPVWPL
Trigger: CAGGGGCCACACTGGACCCAAAGGGCAGAAGGGCTC...CTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CAA 90 bp GGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGGGAGCACCGATCGCTTaGGCTTTCTGTGTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: GRLTECQSQGVGVQGSGKGAPIA*AFCVCR
Trigger: CCTGCACACACAGAAAGCCAAAGCGATCGGTGCTCC...CTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CAA 90 bp TTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGGGGTCTGGATCAGCCTaGCTGCCAACCAACACAACA +
Preference number: 5 (lower is better)
Translates to: LRMCAERAAEGPRGFSRVGSGSA*LPTNTT
Trigger: TGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACCC...CACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp CCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCCCTGTATTTTTCATGTaGTTCTTCAGCCCTCTCGGC +
Preference number: 5 (lower is better)
Translates to: PPASRRAGSLEDVCREGRPVFFM*FFSPLG
Trigger: GCCGAGAGGGCTGAAGAACAACATGAAAAATACAGG...GCGGCCCTCTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS TCA 90 bp GGGTCACAGCAGCGCAAGCACCGGGAAGCAGGGAGCCCCTGGTCCTaGCTGGGCCTGTATTTTTCATGTTGTTCTTCAGCCCTCTCGGCA +
Preference number: 5 (lower is better)
Translates to: GSQQRKHREAGSPWS*LGLYFSCCSSALSA
Trigger: TGCCGAGAGGGCTGAAGAACAACATGAAAAATACAGGCCCAGTCAGGACCAGGGGCTCCCTGCTTCCCGGTGCTTGCGCTGCTGTGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS GCA 90 bp CCTGGAGCGAAGAGTGGGACTCAGTGTAAATTTTTGCCCAGGCCCTaGAAACAAGGAGGCCGCATGAGCCGTCAGGCATCGGGCCTTCGG +
Preference number: 5 (lower is better)
Translates to: PGAKSGTQCKFLPRP*KQGGRMSRQASGLR
Trigger: CCGAAGGCCCGATGCCTGACGGCTCATGCGGCCTCCTTGTTTGCAGGGCCTGGGCAAAAATTTACACTGAGTCCCACTCTTCGCTCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339142.6
ENST00000581774.5
CDS GCA 90 bp GGGGATCTAGGCTGCAAGTGTTTCCAGTTCGATTTCACGGGGCTGTaGAGGGTTATCTGCCGTGTGCAGGACCGGAGCGAGCAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: GDLGCKCFQFDFTGL*RVICRVQDRSEQVA
Trigger: TGCCACCTGCTCGCTCCGGTCCTGCACACGGCAGATAACCCTGCACAGCCCCGTGAAATCGAACTGGAAACACTTGCAGCCTAGATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582625.1
CDS CCA 90 bp AAGATTTCCTTGAGTAGAGCAGCTGTCCTCAGCTCACCTCCCAGCTaGAAGGCCTCGGGCGGCAGGCTTGCCCCTGCTTTGAGAACCGTG +
Preference number: 5 (lower is better)
Translates to: KISLSRAAVLSSPPS*KASGGRLAPALRTV
Trigger: CACGGTTCTCAAAGCAGGGGCAAGCCTGCCGCCCGAGGCCTTCCAGCTGGGAGGTGAGCTGAGGACAGCTGCTCTACTCAAGGAAATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581774.5
CDS-3UTR CAA 90 bp CCCTGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCTTCAAGATAGTGATGTaGATCTGGGGCACGGCGGTC +
Preference number: 5 (lower is better)
Translates to: PWPLSGALRLLLPTWSQGFKIVM*IWGTAV
Trigger: GACCGCCGTGCCCCAGATCAACATCACTATCTTGAA...GCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp ATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCATTCAAGATAGTGATGTaGATCTGGGGCACGGCGGTC +
Preference number: 5 (lower is better)
Translates to: MPKPGSRSPGIGEEAVGSFKIVM*IWGTAV
Trigger: GACCGCCGTGCCCCAGATCAACATCACTATCTTGAA...TGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CAA 90 bp TGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCAGGTTTGCCATATTTCCCTaGGAGGCCTCGATCTCCGCG +
Preference number: 5 (lower is better)
Translates to: WPLSGALRLLLPTWSQGRFAIFP*EASISA
Trigger: CGCGGAGATCGAGGCCTCCAAGGGAAATATGGCAAA...CCTGCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp GTGCCCCGCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGACCTGCTGAGCCTGTTTaGCCATATTTCCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: VPRPGDFICRQLSPEAAGPAEPV*PYFPWR
Trigger: CCTCCAAGGGAAATATGGCAAAACAGGCTCAGCAGG...TCCCGCAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGCGGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CAA 90 bp GCGGGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCCTGCTGAGCCTGTTTaGCCATATTTCCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: AGSLEDVCREGRGRSQRVPAEPV*PYFPWR
Trigger: CCTCCAAGGGAAATATGGCAAAACAGGCTCAGCAGG...AACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CAA 90 bp AGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAAAGTGCCGTGCGGGGTCACTaGAGGATGTGTGCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: SPWARPQGCQGPPIPQESAVRGH*RMCAER
Trigger: CCTCTCTGCACACATCCTCAAGTGACCCCGCACGGC...ACTTTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp AGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGCGGGTGCCCCGCCCTGGTGATTCCTCCACGGTTTACTTaGCTCCTTTTGAGACCTTTA +
Preference number: 5 (lower is better)
Translates to: RGPRKVPEGSRGCPALVIPPRFT*LLLRPL
Trigger: TAAAGGTCTCAAAAGGAGCAAAGTAAACCGTGGAGG...AATCACCAGGGCGGGGCACCCGCGAGAACCCTCTGGGACCTTCCGCGGCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp TGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATGAAAAGGCCTCTCTCTaGGGAGCCAGCAGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: CVQGVSLNAKARESESRDEKASL*GASRLA
Trigger: AGCCAGCCTGCTGGCTCCCAAGAGAGAGGCCTTTTC...ATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp GGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCGGGTCTGGATCAGCCTaGCTGCCAACCAACACAACA +
Preference number: 5 (lower is better)
Translates to: GSLEDVCREGRGRSQRVLGSGSA*LPTNTT
Trigger: TGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACCC...GAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp GGGCTGATTTGTGTGGGAGGCGGCACAGAAAGCCGATGCCAGGGTGGCAGGCATGGGTCTGGATCAGCCTaGCTGCCAACCAACACAACA +
Preference number: 5 (lower is better)
Translates to: GLICVGGGTESRCQGGRHGSGSA*LPTNTT
Trigger: TGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACCC...ATGCCTGCCACCCTGGCATCGGCTTTCTGTGCCGCCTCCCACACAAATCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp CCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCACTCAGTGTAAATTTTaGCCCAGGCCCTGCAAACAA +
Preference number: 5 (lower is better)
Translates to: PPASRRAGSLEDVCREGRTQCKF*PRPCKQ
Trigger: TTGTTTGCAGGGCCTGGGCAAAAATTTACACTGAGT...GCGGCCCTCTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339142.6
CDS-3UTR CAA 90 bp CTGCCGCCACCCGCGTCTCGCCGTGCGGGGTCACTTGAGGATGTGTGCAGAGAGCCTGTATTTTTCATGTaGTTCTTCAGCCCTCTCGGC +
Preference number: 5 (lower is better)
Translates to: LPPPASRRAGSLEDVCREPVFFM*FFSPLG
Trigger: GCCGAGAGGGCTGAAGAACAACATGAAAAATACAGG...CTCTCTGCACACATCCTCAAGTGACCCCGCACGGCGAGACGCGGGTGGCGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CAA 90 bp AGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTCAGCACAGCCCTGTATTTTTCATGTaGTTCTTCAGCCCTCTCGGC +
Preference number: 5 (lower is better)
Translates to: SQGVGVQGSGKRRWGQHSPVFFM*FFSPLG
Trigger: GCCGAGAGGGCTGAAGAACAACATGAAAAATACAGG...GCTGTGCTGACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS GCA 90 bp GTTTCCAGTTCGATTTCACGGGGCTGTGCAGGGTTATCTGCCGTGTaGAGGACCGGAGCGAGCAGGTGGCATTTCAGAAAGCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: VSSSISRGCAGLSAV*RTGASRWHFRKQAG
Trigger: CCCAGCCTGCTTTCTGAAATGCCACCTGCTCGCTCCGGTCCTGCACACGGCAGATAACCCTGCACAGCCCCGTGAAATCGAACTGGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582625.1
CDS-3UTR CAA 90 bp GGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGTTCAAGATAGTGATGTaGATCTGGGGCACGGCGGTC +
Preference number: 5 (lower is better)
Translates to: GRLTECQSQGVGVQGSGKFKIVM*IWGTAV
Trigger: GACCGCCGTGCCCCAGATCAACATCACTATCTTGAA...CTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CAA 90 bp GGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGATTTGCCATATTTCCCTaGGAGGCCTCGATCTCCGCG +
Preference number: 5 (lower is better)
Translates to: GVSLNAKARESESRDRGRFAIFP*EASISA
Trigger: CGCGGAGATCGAGGCCTCCAAGGGAAATATGGCAAA...TCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CAA 90 bp TCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGATCTGGGAGCACCGATCGCTTTGCCTGCTGAGCCTGTTTaGCCATATTTCCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: SAVSSLQRLRDLGAPIALPAEPV*PYFPWR
Trigger: CCTCCAAGGGAAATATGGCAAAACAGGCTCAGCAGG...CAAAGCGATCGGTGCTCCCAGATCCCGCAGCCTCTGGAGAGAGCTGACGGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CAA 90 bp CTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGCCTGCTGAGCCTGTTTaGCCATATTTCCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: LTECQSQGVGVQGSGKRRPAEPV*PYFPWR
Trigger: CCTCCAAGGGAAATATGGCAAAACAGGCTCAGCAGG...CCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CAA 90 bp GGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCTCCCTGCTGAGCCTGTTTaGCCATATTTCCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: GSLEDVCREGRGRSQRVLPAEPV*PYFPWR
Trigger: CCTCCAAGGGAAATATGGCAAAACAGGCTCAGCAGG...GAGAACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CAA 90 bp TGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATGGAGCACCGATCGCTTaGGCTTTCTGTGTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: CVQGVSLNAKARESESRDGAPIA*AFCVCR
Trigger: CCTGCACACACAGAAAGCCAAAGCGATCGGTGCTCC...ATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CAA 90 bp CGATCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGAGACCAGCAGAGCCCTaGGGCAAGGCCACAGGGATG +
Preference number: 5 (lower is better)
Translates to: RSLWLSVCAGRLTECQSQRPAEP*GKATGM
Trigger: CATCCCTGTGGCCTTGCCCAAGGGCTCTGCTGGTCT...CTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp GCCCTGGTGATTTCATCTGCCGTCAGCTCTCTCCAGAGGCTGCGGGATCTGGGACCTGCTGAGCCTGTTTaGCCATATTTCCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: ALVISSAVSSLQRLRDLGPAEPV*PYFPWR
Trigger: CCTCCAAGGGAAATATGGCAAAACAGGCTCAGCAGG...TCCCAGATCCCGCAGCCTCTGGAGAGAGCTGACGGCAGATGAAATCACCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
ENST00000580474.1
CDS-3UTR CAA 90 bp TCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTCCTGCTGAGCCTGTTTaGCCATATTTCCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: SLNAKARESESRDRGRGGPAEPV*PYFPWR
Trigger: CCTCCAAGGGAAATATGGCAAAACAGGCTCAGCAGG...ACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CAA 90 bp CGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGGGAGCACCGATCGCTTaGGCTTTCTGTGTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: RFGFLCVQGVSLNAKAREGAPIA*AFCVCR
Trigger: CCTGCACACACAGAAAGCCAAAGCGATCGGTGCTCC...CTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CAA 90 bp TCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGACCTTCTGGGGCTGATTaGTGTGGGAGGCGGCACAGA +
Preference number: 5 (lower is better)
Translates to: SLWLSVCAGRLTECQSQGPSGAD*CGRRHR
Trigger: TCTGTGCCGCCTCCCACACAAATCAGCCCCAGAAGG...TCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp CCCTGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCCCTGTATTTTTCATGTaGTTCTTCAGCCCTCTCGGC +
Preference number: 5 (lower is better)
Translates to: PWPLSGALRLLLPTWSQGPVFFM*FFSPLG
Trigger: GCCGAGAGGGCTGAAGAACAACATGAAAAATACAGG...GCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp CTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGCCTGTATTTTTCATGTaGTTCTTCAGCCCTCTCGGC +
Preference number: 5 (lower is better)
Translates to: LNAKARESESRDRGRGGGPVFFM*FFSPLG
Trigger: GCCGAGAGGGCTGAAGAACAACATGAAAAATACAGG...CCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CAA 90 bp GCGGGGTCACTTGAGGATGTGTGCAGAGAGGGCCGCGGAAGGTCCCAGAGGGTTCCTCCACGGTTTACTTaGCTCCTTTTGAGACCTTTA +
Preference number: 5 (lower is better)
Translates to: AGSLEDVCREGRGRSQRVPPRFT*LLLRPL
Trigger: TAAAGGTCTCAAAAGGAGCAAAGTAAACCGTGGAGG...AACCCTCTGGGACCTTCCGCGGCCCTCTCTGCACACATCCTCAAGTGACCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp GGCGAGAGCACCGTGGAGACACCGCAACCCTGCTCCAGCTGGTCCTGCAATTGCCCTCCACGGTTTACTTaGCTCCTTTTGAGACCTTTA +
Preference number: 5 (lower is better)
Translates to: GESTVETPQPCSSWSCNCPPRFT*LLLRPL
Trigger: TAAAGGTCTCAAAAGGAGCAAAGTAAACCGTGGAGG...GCAATTGCAGGACCAGCTGGAGCAGGGTTGCGGTGTCTCCACGGTGCTCTCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp CTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGCCTCCACGGTTTACTTaGCTCCTTTTGAGACCTTTA +
Preference number: 5 (lower is better)
Translates to: LNAKARESESRDRGRGGGPPRFT*LLLRPL
Trigger: TAAAGGTCTCAAAAGGAGCAAAGTAAACCGTGGAGG...CCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp CCCTGGCCACTGTCAGGAGCCCTTCGGCTGCTTCTACCAACCTGGAGCCAAGGCGAAACAAAGATTTCCTaGAGTAGAGCAGCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: PWPLSGALRLLLPTWSQGETKIS*SRAAVL
Trigger: GAGGACAGCTGCTCTACTCAAGGAAATCTTTGTTTC...GCCTTGGCTCCAGGTTGGTAGAAGCAGCCGAAGGGCTCCTGACAGTGGCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339142.6
CDS-3UTR CAA 90 bp CTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGAAACAAAGATTTCCTaGAGTAGAGCAGCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: LNAKARESESRDRGRGGGETKIS*SRAAVL
Trigger: GAGGACAGCTGCTCTACTCAAGGAAATCTTTGTTTC...CCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339142.6
ENST00000581774.5
CDS-3UTR CAA 90 bp GAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCGGGGAAGAGGCGGTGGGGTACTCAGTGTAAATTTTaGCCCAGGCCCTGCAAACAA +
Preference number: 5 (lower is better)
Translates to: ECQSQGVGVQGSGKRRWGTQCKF*PRPCKQ
Trigger: TTGTTTGCAGGGCCTGGGCAAAAATTTACACTGAGT...ACCCCACCGCCTCTTCCCCGATCCCTGGACTCCGACTCCCTGGCTTTGGCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339142.6
ENST00000581774.5
CDS GCA 90 bp TGCAAGTGTTTCCAGTTCGATTTCACGGGGCTGTGCAGGGTTATCTaGCGTGTGCAGGACCGGAGCGAGCAGGTGGCATTTCAGAAAGCA +
Preference number: 5 (lower is better)
Translates to: CKCFQFDFTGLCRVI*RVQDRSEQVAFQKA
Trigger: TGCTTTCTGAAATGCCACCTGCTCGCTCCGGTCCTGCACACGGCAGATAACCCTGCACAGCCCCGTGAAATCGAACTGGAAACACTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582625.1
CDS TCA 90 bp GAGTCCCTGTCCACGGGAGCCCATCTTCCTGCCGGGCCCTGTGGCTaGCATCATGATGATGATGATGATGGTGATGATGATGATGATGGT +
Preference number: 5 (lower is better)
Translates to: ESLSTGAHLPAGPCG*HHDDDDDGDDDDDG
Trigger: ACCATCATCATCATCATCACCATCATCATCATCATCATGATGTCAGCCACAGGGCCCGGCAGGAAGATGGGCTCCCGTGGACAGGGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392445.6
CDS TCA 90 bp CAGGGAAGGCACCGAGTTAGGAAGGAGCTGCACAGAGAAACAGCCTaGAAATTGGGGAGAGAAACAGCCTGGAAATCGGAGGTGCTTCCC +
Preference number: 5 (lower is better)
Translates to: QGRHRVRKELHRETA*KLGRETAWKSEVLP
Trigger: GGGAAGCACCTCCGATTTCCAGGCTGTTTCTCTCCCCAATTTTCAGGCTGTTTCTCTGTGCAGCTCCTTCCTAACTCGGTGCCTTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580474.1
CDS GCA 90 bp GTTACACAGCTTCTGGGAGGACAATCACTCTCACACACCCATGCATaGATACACGCACTCACGACGCACTCACGTGCACACACGCACATG +
Preference number: 5 (lower is better)
Translates to: VTQLLGGQSLSHTHA*IHALTTHSRAHTHM
Trigger: CATGTGCGTGTGTGCACGTGAGTGCGTCGTGAGTGCGTGTATGCATGCATGGGTGTGTGAGAGTGATTGTCCTCCCAGAAGCTGTGTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580474.1
CDS-3UTR CAA 90 bp TCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGACCTGCTGAGCCTGTTTaGCCATATTTCCCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: SLWLSVCAGRLTECQSQGPAEPV*PYFPWR
Trigger: CCTCCAAGGGAAATATGGCAAAACAGGCTCAGCAGG...TCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CAA 90 bp CAGCTCCTGAGAGTGAATCCTGACACGGGTGATTGGGACGTGTACTTCCTCTTGGGGTCTGGATCAGCCTaGCTGCCAACCAACACAACA +
Preference number: 5 (lower is better)
Translates to: QLLRVNPDTGDWDVYFLLGSGSA*LPTNTT
Trigger: TGTTGTGTTGGTTGGCAGCAAGGCTGATCCAGACCC...CAAGAGGAAGTACACGTCCCAATCACCCGTGTCAGGATTCACTCTCAGGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS-3UTR CAA 90 bp GGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGCCTGTATTTTTCATGTaGTTCTTCAGCCCTCTCGGC +
Preference number: 5 (lower is better)
Translates to: GFLCVQGVSLNAKARESEPVFFM*FFSPLG
Trigger: GCCGAGAGGGCTGAAGAACAACATGAAAAATACAGG...CTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CAA 90 bp TGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGAGTCGGAGTCCAGGGATCCTGTATTTTTCATGTaGTTCTTCAGCCCTCTCGGC +
Preference number: 5 (lower is better)
Translates to: CVQGVSLNAKARESESRDPVFFM*FFSPLG
Trigger: GCCGAGAGGGCTGAAGAACAACATGAAAAATACAGG...ATCCCTGGACTCCGACTCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CAA 90 bp CAGAGCCCTTGGGCAAGGCCACAGGGATGTCAGGGTCCACCTATCCCTCAAGAACCTCCACGGTTTACTTaGCTCCTTTTGAGACCTTTA +
Preference number: 5 (lower is better)
Translates to: QSPWARPQGCQGPPIPQEPPRFT*LLLRPL
Trigger: TAAAGGTCTCAAAAGGAGCAAAGTAAACCGTGGAGG...TTCTTGAGGGATAGGTGGACCCTGACATCCCTGTGGCCTTGCCCAAGGGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS CCA 90 bp GGTGATGATGATGATGATGGTGATGATGATTGCCACTGTTGTTGTTaGGTGGACTCTAGGGGCCTCTCCAGCTCTGCAGCTCTAAGAGGG +
Preference number: 5 (lower is better)
Translates to: GDDDDDGDDDCHCCC*VDSRGLSSSAALRG
Trigger: CCCTCTTAGAGCTGCAGAGCTGGAGAGGCCCCTAGAGTCCACCCAACAACAACAGTGGCAATCATCATCACCATCATCATCATCATCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392445.6
CDS-3UTR CAA 90 bp TCGCTTTGGCTTTCTGTGTGTGCAGGGCGTCTCACTGAATGCCAAAGCCAGGGACCTGTATTTTTCATGTaGTTCTTCAGCCCTCTCGGC +
Preference number: 5 (lower is better)
Translates to: SLWLSVCAGRLTECQSQGPVFFM*FFSPLG
Trigger: GCCGAGAGGGCTGAAGAACAACATGAAAAATACAGG...TCCCTGGCTTTGGCATTCAGTGAGACGCCCTGCACACACAGAAAGCCAAAGCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS-3UTR CAA 90 bp TTTTCTTTGTCCTCCACGGTTTACTTTGCTCCTTTTGAGACCTTTAGAATTTGCCCTGTATTTTTCATGTaGTTCTTCAGCCCTCTCGGC +
Preference number: 5 (lower is better)
Translates to: FSLSSTVYFAPFETFRICPVFFM*FFSPLG
Trigger: GCCGAGAGGGCTGAAGAACAACATGAAAAATACAGG...GCAAATTCTAAAGGTCTCAAAAGGAGCAAAGTAAACCGTGGAGGACAAAGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000579760.6
CDS CCA 72 bp CGCATGAGCCGTCAGGCATCGGGCCTTCGGGGCGCTTaGCCAGCCCAGCCTCCAGAGCTCCGATTCCGTCCC +
Preference number: 6 (lower is better)
Translates to: RMSRQASGLRGA*PAQPPELRFRP
Trigger: GGGACGGAATCGGAGCTCTGGAGGCTGGGCTGGCCAAGCGCCCCGAAGGCCCGATGCCTGACGGCTCATGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339142.6
ENST00000581774.5
CDS CAA 72 bp CCGCATGAGCCGTCAGGCATCGGGCCTTCGGGGCGCTaGGCCAGCCCAGCCTCCAGAGCTCCGATTCCGTCC +
Preference number: 6 (lower is better)
Translates to: PHEPSGIGPSGR*ASPASRAPIPS
Trigger: GGACGGAATCGGAGCTCTGGAGGCTGGGCTGGCCAAGCGCCCCGAAGGCCCGATGCCTGACGGCTCATGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339142.6
ENST00000581774.5
CDS CAA 72 bp AGCCCATCTTCCTGCCGGGCCCGTCGCTCGGGGGCTTaGGAGCCTCTGCGGGGGATGTCTGTAGCGGGCTTT +
Preference number: 6 (lower is better)
Translates to: SPSSCRARRSGA*EPLRGMSVAGF
Trigger: AAAGCCCGCTACAGACATCCCCCGCAGAGGCTCCAAAGCCCCCGAGCGACGGGCCCGGCAGGAAGATGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583904.5
CDS CAA 90 bp ACAAGGAGGCCGCATGAGCCGTCAGGCATCGGGCCTTCGGGGCGCTaGGCCAGCCCAGCCTCCAGAGCTCCGATTCCGTCCCAGTGGAAA +
Preference number: 6 (lower is better)
Translates to: TRRPHEPSGIGPSGR*ASPASRAPIPSQWK
Trigger: TTTCCACTGGGACGGAATCGGAGCTCTGGAGGCTGGGCTGGCCAAGCGCCCCGAAGGCCCGATGCCTGACGGCTCATGCGGCCTCCTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339142.6
ENST00000581774.5
CDS CCA 72 bp CGCGGTCACCCTTCTCCCGGGTTCGTCCAAAAGCAATaGGCTCTGCGGCCAGACCGACGGCTCGCTCTGAGC +
Preference number: 6 (lower is better)
Translates to: RGHPSPGFVQKQ*ALRPDRRLALS
Trigger: GCTCAGAGCGAGCCGTCGGTCTGGCCGCAGAGCCCATTGCTTTTGGACGAACCCGGGAGAAGGGTGACCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582625.1
CDS TCA 72 bp AACCGTGTGAGAGAGAAGAGGCACCAACAGCTGTCCTaGGCCCACTCTGCAGGTGGCCTGGCCCGCCGCCCA +
Preference number: 6 (lower is better)
Translates to: NRVREKRHQQLS*AHSAGGLARRP
Trigger: TGGGCGGCGGGCCAGGCCACCTGCAGAGTGGGCTCAGGACAGCTGTTGGTGCCTCTTCTCTCTCACACGGTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581774.5
CDS GCA 72 bp GCACCTCCGTCTCCCCGGCGCGGTCTCCGAGGTCTCTaGGACCAGAAGCGGAAGCGCGGTTTCTCGAAAGTA +
Preference number: 6 (lower is better)
Translates to: APPSPRRGLRGL*DQKRKRGFSKV
Trigger: TACTTTCGAGAAACCGCGCTTCCGCTTCTGGTCGCAGAGACCTCGGAGACCGCGCCGGGGAGACGGAGGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339142.6
ENST00000579760.6
ENST00000582295.1
CDS GCA 72 bp CTCCCTGTCTTGGTTCCCTCCTCCCCGGTTGGCAGGTaGTGGAGAGGCCTCCTGGAGCACGTCCTCCCATGT +
Preference number: 6 (lower is better)
Translates to: LPVLVPSSPVGR*WRGLLEHVLPC
Trigger: ACATGGGAGGACGTGCTCCAGGAGGCCTCTCCAGCACCTGCCAACCGGGGAGGAGGGAACCAAGACAGGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392445.6
CDS TCA 72 bp AATTTTTGCCCAGGCCCTGCAAACAAGGAGGCCGCATaGGCCGTCAGGCATCGGGCCTTCGGGGCGCTTGGC +
Preference number: 6 (lower is better)
Translates to: NFCPGPANKEAA*AVRHRAFGALG
Trigger: GCCAAGCGCCCCGAAGGCCCGATGCCTGACGGCTCATGCGGCCTCCTTGTTTGCAGGGCCTGGGCAAAAATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339142.6
ENST00000581774.5
CDS TCA 72 bp GCTCTGCGGCCAGACCGACGGCTCGCTCTGAGCAAATaGACTCCAGATGTCGGGGCCAGCTGGGGATCTAGG +
Preference number: 6 (lower is better)
Translates to: ALRPDRRLALSK*TPDVGASWGSR
Trigger: CCTAGATCCCCAGCTGGCCCCGACATCTGGAGTTCATTTGCTCAGAGCGAGCCGTCGGTCTGGCCGCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582625.1
CDS TCA 72 bp AGCAATGGGCTCTGCGGCCAGACCGACGGCTCGCTCTaGGCAAATGAACTCCAGATGTCGGGGCCAGCTGGG +
Preference number: 6 (lower is better)
Translates to: SNGLCGQTDGSL*ANELQMSGPAG
Trigger: CCCAGCTGGCCCCGACATCTGGAGTTCATTTGCTCAGAGCGAGCCGTCGGTCTGGCCGCAGAGCCCATTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582625.1
CDS GCA 72 bp CTCACCTCCCAGCTGGAAGGCCTCGGGCGGCAGGCTTaGCCCTGCTTTGAGAACCGTGTGAGAGAGAAGAGG +
Preference number: 6 (lower is better)
Translates to: LTSQLEGLGRQA*PCFENRVREKR
Trigger: CCTCTTCTCTCTCACACGGTTCTCAAAGCAGGGGCAAGCCTGCCGCCCGAGGCCTTCCAGCTGGGAGGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581774.5
CDS CCA 72 bp GGGTTATCTGCCGTGTGCAGGACCGGAGCGAGCAGGTaGCATTTCAGAAAGCAGGCTGGGGGACCAAGCCCC +
Preference number: 6 (lower is better)
Translates to: GLSAVCRTGASR*HFRKQAGGPSP
Trigger: GGGGCTTGGTCCCCCAGCCTGCTTTCTGAAATGCCACCTGCTCGCTCCGGTCCTGCACACGGCAGATAACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582625.1
CDS CAA 90 bp TGCCCTTTGGGTCCAGTGTGGCCCCTGGCCCCTGCTGAGCCTGTTTaGCCATATTTCCCTTGGAGGCCTCGATCTCCGCGGTCACCCTTC +
Preference number: 6 (lower is better)
Translates to: CPLGPVWPLAPAEPV*PYFPWRPRSPRSPF
Trigger: GAAGGGTGACCGCGGAGATCGAGGCCTCCAAGGGAAATATGGCAAAACAGGCTCAGCAGGGGCCAGGGGCCACACTGGACCCAAAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000582625.1
ENST00000583904.5
CDS TCA 72 bp TCGGGCGGCAGGCTTGCCCCTGCTTTGAGAACCGTGTaGGAGAGAAGAGGCACCAACAGCTGTCCTGAGCCC +
Preference number: 6 (lower is better)
Translates to: SGGRLAPALRTV*ERRGTNSCPEP
Trigger: GGGCTCAGGACAGCTGTTGGTGCCTCTTCTCTCTCACACGGTTCTCAAAGCAGGGGCAAGCCTGCCGCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581774.5
CDS GCA 72 bp TCCCAGCTGGAAGGCCTCGGGCGGCAGGCTTGCCCCTaGTTTGAGAACCGTGTGAGAGAGAAGAGGCACCAA +
Preference number: 6 (lower is better)
Translates to: SQLEGLGRQACP*FENRVREKRHQ
Trigger: TTGGTGCCTCTTCTCTCTCACACGGTTCTCAAAGCAGGGGCAAGCCTGCCGCCCGAGGCCTTCCAGCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581774.5
CDS GCA 72 bp CCAGCAAGAGTCCCTGTCCACGGGAGCCCATCTTCCTaGCGGGCCCTGGTGGGAAAGAAACACACAGGGAAG +
Preference number: 6 (lower is better)
Translates to: PARVPVHGSPSS*RALVGKKHTGK
Trigger: CTTCCCTGTGTGTTTCTTTCCCACCAGGGCCCGGCAGGAAGATGGGCTCCCGTGGACAGGGACTCTTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580474.1
CDS CCA 72 bp AGCAAAGGGCCTAGAAGCCTGGCGTCCACATACAACTaGAGGGACGAGACCCCGAGTAGCCTCTGGGCTCCC +
Preference number: 6 (lower is better)
Translates to: SKGPRSLASTYN*RDETPSSLWAP
Trigger: GGGAGCCCAGAGGCTACTCGGGGTCTCGTCCCTCCAGTTGTATGTGGACGCCAGGCTTCTAGGCCCTTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582625.1
CDS CCA 72 bp CTGGCCCCTGCTGAGCCTGTTTTGCCATATTTCCCTTaGAGGCCTCGATCTCCGCGGTCACCCTTCTCCCGG +
Preference number: 6 (lower is better)
Translates to: LAPAEPVLPYFP*RPRSPRSPFSR
Trigger: CCGGGAGAAGGGTGACCGCGGAGATCGAGGCCTCCAAGGGAAATATGGCAAAACAGGCTCAGCAGGGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582625.1
CDS CAA 72 bp GAGCCCCTGGTCCTGACTGGGCCTGTATTTTTCATGTaGTTCTTCAGCCCTCCGTCCCGCCGGCCGCTCCTC +
Preference number: 6 (lower is better)
Translates to: EPLVLTGPVFFM*FFSPPSRRPLL
Trigger: GAGGAGCGGCCGGCGGGACGGAGGGCTGAAGAACAACATGAAAAATACAGGCCCAGTCAGGACCAGGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311661.4
CDS GCA 72 bp GCGCCCAAAAGCCACTCCACAGAGGCCCTGACTGCATaGGTCAACCCCTCCTGTGAGTACAGGGAGAAAGGC +
Preference number: 6 (lower is better)
Translates to: APKSHSTEALTA*VNPSCEYREKG
Trigger: GCCTTTCTCCCTGTACTCACAGGAGGGGTTGACGCATGCAGTCAGGGCCTCTGTGGAGTGGCTTTTGGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578229.5
CDS CAA 72 bp CCGCGGTCACCCTTCTCCCCTTTCAAGATAGTGATGTaGATCTGGGGCACGGCGGTCGCCGGGTACATGGAG +
Preference number: 6 (lower is better)
Translates to: PRSPFSPFKIVM*IWGTAVAGYME
Trigger: CTCCATGTACCCGGCGACCGCCGTGCCCCAGATCAACATCACTATCTTGAAAGGGGAGAAGGGTGACCGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS CAA 90 bp TTCCTGCCGGGCCCTGGAGCGAAGAGTGGGACTCAGTGTAAATTTTaGCCCAGGCCCTGCAAACAAGGAGGCCGCATGAGCCGTCAGGCA +
Preference number: 6 (lower is better)
Translates to: FLPGPGAKSGTQCKF*PRPCKQGGRMSRQA
Trigger: TGCCTGACGGCTCATGCGGCCTCCTTGTTTGCAGGGCCTGGGCAAAAATTTACACTGAGTCCCACTCTTCGCTCCAGGGCCCGGCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339142.6
ENST00000581774.5
CDS GCA 72 bp GGCTGCAAGTGTTTCCAGTTCGATTTCACGGGGCTGTaGAGGGTTATCTGCCGTGTGCAGGACCGGAGCGAG +
Preference number: 6 (lower is better)
Translates to: GCKCFQFDFTGL*RVICRVQDRSE
Trigger: CTCGCTCCGGTCCTGCACACGGCAGATAACCCTGCACAGCCCCGTGAAATCGAACTGGAAACACTTGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582625.1
CDS CCA 72 bp CAAAGTCAGCGCTTCCTATTCCGTGAAGGTCCAGGTTaGCCACAGACAGGACTGGACAGACCCGGCGGTCAG +
Preference number: 6 (lower is better)
Translates to: QSQRFLFREGPG*PQTGLDRPGGQ
Trigger: CTGACCGCCGGGTCTGTCCAGTCCTGTCTGTGGCCAACCTGGACCTTCACGGAATAGGAAGCGCTGACTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582295.1
CDS GCA 72 bp TCGATTTCACGGGGCTGTGCAGGGTTATCTGCCGTGTaGAGGACCGGAGCGAGCAGGTGGCATTTCAGAAAG +
Preference number: 6 (lower is better)
Translates to: SISRGCAGLSAV*RTGASRWHFRK
Trigger: CTTTCTGAAATGCCACCTGCTCGCTCCGGTCCTGCACACGGCAGATAACCCTGCACAGCCCCGTGAAATCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582625.1
CDS GCA 72 bp TTCCAGTTCGATTTCACGGGGCTGTGCAGGGTTATCTaGCGTGTGCAGGACCGGAGCGAGCAGGTGGCATTT +
Preference number: 6 (lower is better)
Translates to: FQFDFTGLCRVI*RVQDRSEQVAF
Trigger: AAATGCCACCTGCTCGCTCCGGTCCTGCACACGGCAGATAACCCTGCACAGCCCCGTGAAATCGAACTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582625.1
CDS CCA 72 bp TCACCCTTCTCCCCTTTCAAGATAGTGATGTTGATCTaGGGCACGGCGGTCGCCGGGTACATGGAGGTACCG +
Preference number: 6 (lower is better)
Translates to: SPFSPFKIVMLI*GTAVAGYMEVP
Trigger: CGGTACCTCCATGTACCCGGCGACCGCCGTGCCCCAGATCAACATCACTATCTTGAAAGGGGAGAAGGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000311661.4
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS CAA 72 bp GGCCCTGGAGCGAAGAGTGGGACTCAGTGTAAATTTTaGCCCAGGCCCTGCAAACAAGGAGGCCGCATGAGC +
Preference number: 6 (lower is better)
Translates to: GPGAKSGTQCKF*PRPCKQGGRMS
Trigger: GCTCATGCGGCCTCCTTGTTTGCAGGGCCTGGGCAAAAATTTACACTGAGTCCCACTCTTCGCTCCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339142.6
ENST00000581774.5
CDS CAA 72 bp GAGCCCCTGGTCCTGACTGGGCCTGTATTTTTCATGTaGTTCTTCAGCCCTCTCGGCATGGTCCGGAGGCGA +
Preference number: 6 (lower is better)
Translates to: EPLVLTGPVFFM*FFSPLGMVRRR
Trigger: TCGCCTCCGGACCATGCCGAGAGGGCTGAAGAACAACATGAAAAATACAGGCCCAGTCAGGACCAGGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000339142.6
ENST00000354124.7
ENST00000392445.6
ENST00000578229.5
ENST00000579760.6
ENST00000580454.5
ENST00000580474.1
ENST00000581774.5
ENST00000583904.5
CDS GCA 72 bp AAGAGTGGGACTCAGTGTAAATTTTTGCCCAGGCCCTaGAAACAAGGAGGCCGCATGAGCCGTCAGGCATCG +
Preference number: 6 (lower is better)
Translates to: KSGTQCKFLPRP*KQGGRMSRQAS
Trigger: CGATGCCTGACGGCTCATGCGGCCTCCTTGTTTGCAGGGCCTGGGCAAAAATTTACACTGAGTCCCACTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339142.6
ENST00000581774.5
CDS TCA 72 bp TCCACGGGAGCCCATCTTCCTGCCGGGCCCTGTGGCTaGCATCATGATGATGATGATGATGGTGATGATGAT +
Preference number: 6 (lower is better)
Translates to: STGAHLPAGPCG*HHDDDDDGDDD
Trigger: ATCATCATCACCATCATCATCATCATCATGATGTCAGCCACAGGGCCCGGCAGGAAGATGGGCTCCCGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392445.6
CDS CCA 72 bp TCACGCCACTGGGAAATGCTGCAGTTACACAGCTTCTaGGAGGACAATCACTCTCACACACCCATGCATGCA +
Preference number: 6 (lower is better)
Translates to: SRHWEMLQLHSF*EDNHSHTPMHA
Trigger: TGCATGCATGGGTGTGTGAGAGTGATTGTCCTCCCAGAAGCTGTGTAACTGCAGCATTTCCCAGTGGCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580474.1