Pregenerated sensors for C1QBP (Homo sapiens)
Ensembl gene IDs: ENSG00000108561Ensembl transcript IDs: ENST00000573204.1, ENST00000573421.1, ENST00000574444.5, ENST00000576122.1
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AAACAAGAAGTCAATACATGCTGCTGCTGGAAGGAGATGGATGGCTaGATCAAGGATCTCTGTTCAGAGTGTCTGATGGCCACCACTATT | + |
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Preference number: 5 (lower is better) Translates to: KQEVNTCCCWKEMDG*IKDLCSECLMATTI Trigger: AATAGTGGTGGCCATCAGACACTCTGAACAGAGATCCTTGATCCAGCCATCCATCTCCTTCCAGCAGCAGCATGTATTGACTTCTTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573204.1 |
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| CDS TCA 90 bp | CAGTTAAGAAATGTGGATACCAGCCTCAGCTATGTGCCAATTAACTaGGTTTATATCAGTCCCTTAACATTCCAAGCCTTTTCCTCCACC | + |
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Preference number: 5 (lower is better) Translates to: QLRNVDTSLSYVPIN*VYISPLTFQAFSST Trigger: GGTGGAGGAAAAGGCTTGGAATGTTAAGGGACTGATATAAACTCAGTTAATTGGCACATAGCTGAGGCTGGTATCCACATTTCTTAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573204.1 |
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| CDS CCA 72 bp | TTGTCTCGTGGGTTTAGCCCGCTGGTTGCCAATCAATaGAAAAATGTCCCAGACCTCAGAGGTCGGTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: LSRGFSPLVANQ*KNVPDLRGRLQ Trigger: CTGCAACCGACCTCTGAGGTCTGGGACATTTTTCCATTGATTGGCAACCAGCGGGCTAAACCCACGAGACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000574444.5 |
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| CDS CCA 72 bp | GTCAATACATGCTGCTGCTGGAAGGAGATGGATGGCTaGATCAAGGATCTCTGTTCAGAGTGTCTGATGGCC | + |
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Preference number: 6 (lower is better) Translates to: VNTCCCWKEMDG*IKDLCSECLMA Trigger: GGCCATCAGACACTCTGAACAGAGATCCTTGATCCAGCCATCCATCTCCTTCCAGCAGCAGCATGTATTGAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573204.1 |
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| CDS GCA 72 bp | TTCAGGCTGGGGAAACAAGAAGTCAATACATGCTGCTaGTGGAAGGAGATGGATGGCTGGATCAAGGATCTC | + |
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Preference number: 6 (lower is better) Translates to: FRLGKQEVNTCC*WKEMDGWIKDL Trigger: GAGATCCTTGATCCAGCCATCCATCTCCTTCCAGCAGCAGCATGTATTGACTTCTTGTTTCCCCAGCCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000573204.1 ENST00000573421.1 |
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| CDS GCA 72 bp | CAGTTCAGGCTGGGGAAACAAGAAGTCAATACATGCTaGTGCTGGAAGGAGATGGATGGCTGGATCAAGGAT | + |
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Preference number: 6 (lower is better) Translates to: QFRLGKQEVNTC*CWKEMDGWIKD Trigger: ATCCTTGATCCAGCCATCCATCTCCTTCCAGCAGCAGCATGTATTGACTTCTTGTTTCCCCAGCCTGAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000573204.1 ENST00000573421.1 |
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| CDS GCA 72 bp | TGTCAGTTCAGGCTGGGGAAACAAGAAGTCAATACATaGTGCTGCTGGAAGGAGATGGATGGCTGGATCAAG | + |
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Preference number: 6 (lower is better) Translates to: CQFRLGKQEVNT*CCWKEMDGWIK Trigger: CTTGATCCAGCCATCCATCTCCTTCCAGCAGCAGCATGTATTGACTTCTTGTTTCCCCAGCCTGAACTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000573204.1 ENST00000573421.1 |
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| CDS CAA 72 bp | CAACAAAAGCTTTGTCTCGTGGGTTTAGCCCGCTGGTaGCCAATCAATGGAAAAATGTCCCAGACCTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: QQKLCLVGLARW*PINGKMSQTSE Trigger: CTCTGAGGTCTGGGACATTTTTCCATTGATTGGCAACCAGCGGGCTAAACCCACGAGACAAAGCTTTTGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000574444.5 |
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| CDS CCA 72 bp | AATCAACAAAAGCTTTGTCTCGTGGGTTTAGCCCGCTaGTTGCCAATCAATGGAAAAATGTCCCAGACCTCA | + |
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Preference number: 6 (lower is better) Translates to: NQQKLCLVGLAR*LPINGKMSQTS Trigger: TGAGGTCTGGGACATTTTTCCATTGATTGGCAACCAGCGGGCTAAACCCACGAGACAAAGCTTTTGTTGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000574444.5 |
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| CDS TCA 72 bp | TGGATGGCTGGATCAAGGATCTCTGTTCAGAGTGTCTaGTGGCCACCACTATTAGGATATTATGTAGCCATT | + |
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Preference number: 6 (lower is better) Translates to: WMAGSRISVQSV*WPPLLGYYVAI Trigger: AATGGCTACATAATATCCTAATAGTGGTGGCCATCAGACACTCTGAACAGAGATCCTTGATCCAGCCATCCA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573204.1 |
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| CDS CAA 90 bp | TCCACTTTCCGCTATAAACCAGGAGAATTTCCAATCCTCTTCCACTaGCCAAACGATATAACTATGCTATTTTCAACCACGACCATGGGC | + |
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Preference number: 6 (lower is better) Translates to: STFRYKPGEFPILFH*PNDITMLFSTTTMG Trigger: GCCCATGGTCGTGGTTGAAAATAGCATAGTTATATCGTTTGGCAAGTGGAAGAGGATTGGAAATTCTCCTGGTTTATAGCGGAAAGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576122.1 |
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| CDS TCA 72 bp | AATGTGGATACCAGCCTCAGCTATGTGCCAATTAACTaGGTTTATATCAGTCCCTTAACATTCCAAGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: NVDTSLSYVPIN*VYISPLTFQAF Trigger: AAAGGCTTGGAATGTTAAGGGACTGATATAAACTCAGTTAATTGGCACATAGCTGAGGCTGGTATCCACATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573204.1 |
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| CDS CAA 72 bp | CGCTATAAACCAGGAGAATTTCCAATCCTCTTCCACTaGCCAAACGATATAACTATGCTATTTTCAACCACG | + |
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Preference number: 6 (lower is better) Translates to: RYKPGEFPILFH*PNDITMLFSTT Trigger: CGTGGTTGAAAATAGCATAGTTATATCGTTTGGCAAGTGGAAGAGGATTGGAAATTCTCCTGGTTTATAGCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576122.1 |
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| CDS CAA 72 bp | AATAGTCTTATGCCATACTATTCCCAAATGAAGAGCTaGATCTCACTTCTGTTGGCACCCTGCTTGGTTAAA | + |
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Preference number: 6 (lower is better) Translates to: NSLMPYYSQMKS*ISLLLAPCLVK Trigger: TTTAACCAAGCAGGGTGCCAACAGAAGTGAGATCAAGCTCTTCATTTGGGAATAGTATGGCATAAGACTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573204.1 |
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| CDS CAA 90 bp | TCAGAGTGTCTGATGGCCACCACTATTAGGATATTATGTAGCCATTaGAATAGTCTTATGCCATACTATTCCCAAATGAAGAGCTTGATC | + |
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Preference number: 6 (lower is better) Translates to: SECLMATTIRILCSH*NSLMPYYSQMKSLI Trigger: GATCAAGCTCTTCATTTGGGAATAGTATGGCATAAGACTATTCAAATGGCTACATAATATCCTAATAGTGGTGGCCATCAGACACTCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573204.1 |
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