Pregenerated sensors for C1QB (Homo sapiens)
Ensembl gene IDs: ENSG00000173369Ensembl transcript IDs: ENST00000432749.6, ENST00000509305.6, ENST00000510260.5
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TGCCAGGTGCTGGGACACAGAGTTGAATTAGACCACTGTCCCTTGGCCTTGAAGACTGTGTGCATTGGTTaGGCAAGGGGTGGTGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: CQVLGHRVELDHCPLALKTVCIG*ARGGVG Trigger: CCCAACACCACCCCTTGCCCAACCAATGCACACAGT...CTTCAAGGCCAAGGGACAGTGGTCTAATTCAACTCTGTGTCCCAGCACCTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| 3UTR-3UTR CAA 90 bp | TGCCAGGTGCTGGGACACAGAGTTGAATTAGACCACTGTCCCTTGGCCTTGAAGGCCCTACTGTGTGCATaGGTTGGGCAAGGGGTGGTG | + |
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Preference number: 3 (lower is better) Translates to: CQVLGHRVELDHCPLALKALLCA*VGQGVV Trigger: CACCACCCCTTGCCCAACCAATGCACACAGTAGGGC...CTTCAAGGCCAAGGGACAGTGGTCTAATTCAACTCTGTGTCCCAGCACCTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR TCA 90 bp | GGTAGAGTGAGCGTTGCTGGCAGGGGGAGCCGGGGTGGATGTGAAGCAGCCCACCCCCCTGCTCCAGCTTaGGGACCATGCCACCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GRVSVAGRGSRGGCEAAHPPAPA*GPCHRW Trigger: CCACCGGTGGCATGGTCCTCAAGCTGGAGCAGGGGG...GTGGGCTGCTTCACATCCACCCCGGCTCCCCCTGCCAGCAACGCTCACTCTACC 68% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR TCA 90 bp | GGTAGAGTGAGCGTTGCTGGCAGGGGGAGCCGGGGTGGATGTGAAGCAGCCCACGAAGCTGGTGTCCTGTaGGGCCACTGGGCTGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: GRVSVAGRGSRGGCEAAHEAGVL*GHWAEQ Trigger: CTGCTCAGCCCAGTGGCCTCACAGGACACCAGCTTC...GTGGGCTGCTTCACATCCACCCCGGCTCCCCCTGCCAGCAACGCTCACTCTACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR TCA 90 bp | GGTAGAGTGAGCGTTGCTGGCAGGGGGAGCCGGGGTGGATGTGAAGCAGCCCACGTGTTGGGGGTAGAGTaGGCGTTGCTGGCAGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: GRVSVAGRGSRGGCEAAHVLGVE*ALLAGG Trigger: TCCCCCTGCCAGCAACGCTCACTCTACCCCCAACAC...GTGGGCTGCTTCACATCCACCCCGGCTCCCCCTGCCAGCAACGCTCACTCTACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR TCA 90 bp | GGTAGAGTGAGCGTTGCTGGCAGGGGGAGCCGGGGTGGATGTGAAGCAGCCCACCCATGCCACCGGTGGTaGCCTGGAAGGTGTTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: GRVSVAGRGSRGGCEAAHPCHRW*PGRCCR Trigger: CCTACAACACCTTCCAGGTCACCACCGGTGGCATGG...GTGGGCTGCTTCACATCCACCCCGGCTCCCCCTGCCAGCAACGCTCACTCTACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR CCA 90 bp | GGTAGAGTGAGCGTTGCTGGCAGGGGGAGCCGGGGTGGATGTGAAGCAGCCCACTCTCCGAACTCACCATaGTCTCCAGCCAGCCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: GRVSVAGRGSRGGCEAAHSPNSP*SPASPG Trigger: TCCAGGGCTGGCTGGAGACCATGGTGAGTTCGGAGA...GTGGGCTGCTTCACATCCACCCCGGCTCCCCCTGCCAGCAACGCTCACTCTACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR GCA 90 bp | GGTAGAGTGAGCGTTGCTGGCAGGGGGAGCCGGGGTGGATGTGAAGCAGCCCACGGAACCCGGAAAAGATaGTGTTGGCACCCTCCATGC | + |
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Preference number: 4 (lower is better) Translates to: GRVSVAGRGSRGGCEAAHGTRKR*CWHPPC Trigger: GCATGGAGGGTGCCAACAGCATCTTTTCCGGGTTCC...GTGGGCTGCTTCACATCCACCCCGGCTCCCCCTGCCAGCAACGCTCACTCTACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR CCA 90 bp | GGTAGAGTGAGCGTTGCTGGCAGGGGGAGCCGGGGTGGATGTGAAGCAGCCCACCGGAAAAGATGCTGTTaGCACCCTCCATGCCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: GRVSVAGRGSRGGCEAAHRKRCC*HPPCPV Trigger: TACTGGGCATGGAGGGTGCCAACAGCATCTTTTCCG...GTGGGCTGCTTCACATCCACCCCGGCTCCCCCTGCCAGCAACGCTCACTCTACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR TCA 90 bp | GGTAGAGTGAGCGTTGCTGGCAGGGGGAGCCGGGGTGGATGTGAAGCAGCCCACTGTTGTTCATGTTGGTaGTCACGTGGTCGAAGCGGA | + |
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Preference number: 4 (lower is better) Translates to: GRVSVAGRGSRGGCEAAHCCSCW*SRGRSG Trigger: TCCGCTTCGACCACGTGATCACCAACATGAACAACA...GTGGGCTGCTTCACATCCACCCCGGCTCCCCCTGCCAGCAACGCTCACTCTACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR TCA 90 bp | ACTCAGCAGCATTCACCAAGCCCTACTGTGTGCATTGGTTGGGCAAGGGGTGGTGCTCCCGGCCACGCATaGGGTTCACGCACAGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: TQQHSPSPTVCIGWARGGAPGHA*GSRTGS Trigger: GGAACCTGTGCGTGAACCTCATGCGTGGCCGGGAGC...ACCACCCCTTGCCCAACCAATGCACACAGTAGGGCTTGGTGAATGCTGCTGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR TCA 90 bp | ACTCAGCAGCATTCACCAAGCCCTACTGTGTGCATTGGTTGGGCAAGGGGTGGTGAGCCGGGGTGGATGTaGAGCAGCCCACAGGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: TQQHSPSPTVCIGWARGGEPGWM*SSPQVR Trigger: CCTGACCTGTGGGCTGCTTCACATCCACCCCGGCTC...ACCACCCCTTGCCCAACCAATGCACACAGTAGGGCTTGGTGAATGCTGCTGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR GCA 90 bp | GGTAGAGTGAGCGTTGCTGGCAGGGGGAGCCGGGGTGGATGTGAAGCAGCCCACACATCAGTACTGGGATaGTGCCCCATGGGATCTTCA | + |
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Preference number: 4 (lower is better) Translates to: GRVSVAGRGSRGGCEAAHTSVLG*CPMGSS Trigger: TGAAGATCCCATGGGGCAGCATCCCAGTACTGATGT...GTGGGCTGCTTCACATCCACCCCGGCTCCCCCTGCCAGCAACGCTCACTCTACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR GCA 90 bp | TGCCAGGTGCTGGGACACAGAGTTGAATTAGACCACTGTCCCTTGGCCTTGAAGCAGGGATACCCGGGATaGCAGGGATGGCTGGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: CQVLGHRVELDHCPLALKQGYPG*QGWLGA Trigger: GGCCCCCAGCCATCCCTGGCATCCCGGGTATCCCTG...CTTCAAGGCCAAGGGACAGTGGTCTAATTCAACTCTGTGTCCCAGCACCTGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR CCA 90 bp | TGCCAGGTGCTGGGACACAGAGTTGAATTAGACCACTGTCCCTTGGCCTTGAAGGGCTCCAGGGGCCCCTaGGCCACCTTTAGGGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: CQVLGHRVELDHCPLALKGSRGP*ATFRAH Trigger: ATGGGCCCTAAAGGTGGCCCAGGGGCCCCTGGAGCC...CTTCAAGGCCAAGGGACAGTGGTCTAATTCAACTCTGTGTCCCAGCACCTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR TCA 90 bp | TGCCAGGTGCTGGGACACAGAGTTGAATTAGACCACTGTCCCTTGGCCTTGAAGCGGGCACCTTGCAGGTaGACTTGCCACTGCGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: CQVLGHRVELDHCPLALKRAPCR*TCHCGA Trigger: AGCCCCGCAGTGGCAAGTTCACCTGCAAGGTGCCCG...CTTCAAGGCCAAGGGACAGTGGTCTAATTCAACTCTGTGTCCCAGCACCTGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR GCA 90 bp | ACTCAGCAGCATTCACCAAGCCCTACTGTGTGCATTGGTTGGGCAAGGGGTGGTGGTGACCACCTTCTGTaGACGCTCCCGGCCACGCAT | + |
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Preference number: 4 (lower is better) Translates to: TQQHSPSPTVCIGWARGGGDHLL*TLPATH Trigger: ATGCGTGGCCGGGAGCGTGCACAGAAGGTGGTCACC...ACCACCCCTTGCCCAACCAATGCACACAGTAGGGCTTGGTGAATGCTGCTGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR CCA 90 bp | ACTCAGCAGCATTCACCAAGCCCTACTGTGTGCATTGGTTGGGCAAGGGGTGGTGGCCCATGGGGCCCTTaGGGCCGACTTTTCCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: TQQHSPSPTVCIGWARGGGPWGP*GRLFLD Trigger: ATCCAGGAAAAGTCGGCCCCAAGGGCCCCATGGGCC...ACCACCCCTTGCCCAACCAATGCACACAGTAGGGCTTGGTGAATGCTGCTGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR TCA 90 bp | TGCCAGGTGCTGGGACACAGAGTTGAATTAGACCACTGTCCCTTGGCCTTGAAGGGCGCAGGGGGACGTTaGTGGTTCTTGTGGCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: CQVLGHRVELDHCPLALKGAGGR*WFLWQR Trigger: TCTCTGCCACAAGAACCATCAACGTCCCCCTGCGCC...CTTCAAGGCCAAGGGACAGTGGTCTAATTCAACTCTGTGTCCCAGCACCTGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR GCA 90 bp | ACTCAGCAGCATTCACCAAGCCCTACTGTGTGCATTGGTTGGGCAAGGGGTGGTTTCTTGTCGGTGGCCTaGAGGAAGACGTTCTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: TQQHSPSPTVCIGWARGGFLSVA*RKTFSP Trigger: GGGGGAGAACGTCTTCCTGCAGGCCACCGACAAGAA...ACCACCCCTTGCCCAACCAATGCACACAGTAGGGCTTGGTGAATGCTGCTGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR CCA 90 bp | ACTCAGCAGCATTCACCAAGCCCTACTGTGTGCATTGGTTGGGCAAGGGGTGGTCAGCTGAGCTGGGCCTaGGAGATATCGATTAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: TQQHSPSPTVCIGWARGGQLSWA*EISIRP Trigger: GGGCCTAATCGATATCTCCCAGGCCCAGCTCAGCTG...ACCACCCCTTGCCCAACCAATGCACACAGTAGGGCTTGGTGAATGCTGCTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR CCA 90 bp | ACTCAGCAGCATTCACCAAGCCCTACTGTGTGCATTGGTTGGGCAAGGGGTGGTCCGGTGCAGCTGAGCTaGGCCTGGGAGATATCGATT | + |
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Preference number: 4 (lower is better) Translates to: TQQHSPSPTVCIGWARGGPVQLS*AWEISI Trigger: AATCGATATCTCCCAGGCCCAGCTCAGCTGCACCGG...ACCACCCCTTGCCCAACCAATGCACACAGTAGGGCTTGGTGAATGCTGCTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR CCA 90 bp | TTAGACCACTGTCCCTTGGCCTTGAAGAGTTTATTTACTCATTCACTCAGCAGCCCGGGATGCCAGGGATaGCTGGGGGCCCGGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LDHCPLALKSLFTHSLSSPGCQG*LGARCS Trigger: GCTGCACCGGGCCCCCAGCCATCCCTGGCATCCCGG...GCTGCTGAGTGAATGAGTAAATAAACTCTTCAAGGCCAAGGGACAGTGGTCTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR CCA 90 bp | ACTCAGCAGCATTCACCAAGCCCTACTGTGTGCATTGGTTGGGCAAGGGGTGGTGGGGCCGACTTTTCCTaGATTCCCAGGAATCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: TQQHSPSPTVCIGWARGGGADFS*IPRNPW Trigger: CCAGGGATTCCTGGGAATCCAGGAAAAGTCGGCCCC...ACCACCCCTTGCCCAACCAATGCACACAGTAGGGCTTGGTGAATGCTGCTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR TCA 90 bp | TGCCAGGTGCTGGGACACAGAGTTGAATTAGACCACTGTCCCTTGGCCTTGAAGAGCTGGCGTGGTAGGTaGAGTAGTAGAGACCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: CQVLGHRVELDHCPLALKSWRGR*SSRDRA Trigger: TGCCCGGTCTCTACTACTTCACCTACCACGCCAGCT...CTTCAAGGCCAAGGGACAGTGGTCTAATTCAACTCTGTGTCCCAGCACCTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR GCA 90 bp | ACTCAGCAGCATTCACCAAGCCCTACTGTGTGCATTGGTTGGGCAAGGGGTGGTAAGACGTTCTCCCCCTaGTCCAGCTTGAGGACCATG | + |
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Preference number: 4 (lower is better) Translates to: TQQHSPSPTVCIGWARGGKTFSP*SSLRTM Trigger: CATGGTCCTCAAGCTGGAGCAGGGGGAGAACGTCTT...ACCACCCCTTGCCCAACCAATGCACACAGTAGGGCTTGGTGAATGCTGCTGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR CCA 90 bp | ACTCAGCAGCATTCACCAAGCCCTACTGTGTGCATTGGTTGGGCAAGGGGTGGTCTCTCCTTTTATCCCTaGGGTCCCAGGTTGGCCATC | + |
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Preference number: 4 (lower is better) Translates to: TQQHSPSPTVCIGWARGGLSFYP*GPRLAI Trigger: GATGGCCAACCTGGGACCCCAGGGATAAAAGGAGAG...ACCACCCCTTGCCCAACCAATGCACACAGTAGGGCTTGGTGAATGCTGCTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR CCA 90 bp | ACTCAGCAGCATTCACCAAGCCCTACTGTGTGCATTGGTTGGGCAAGGGGTGGTGTCTCCAGCCAGCCCTaGAAGCCCTTTCTCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: TQQHSPSPTVCIGWARGGVSSQP*KPFLSF Trigger: AAAGGAGAGAAAGGGCTTCCAGGGCTGGCTGGAGAC...ACCACCCCTTGCCCAACCAATGCACACAGTAGGGCTTGGTGAATGCTGCTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR CCA 90 bp | ACTCAGCAGCATTCACCAAGCCCTACTGTGTGCATTGGTTGGGCAAGGGGTGGTACTGTGTGCATTGGTTaGGCAAGGGGTGGTGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: TQQHSPSPTVCIGWARGGTVCIG*ARGGVG Trigger: CCCAACACCACCCCTTGCCCAACCAATGCACACAGT...ACCACCCCTTGCCCAACCAATGCACACAGTAGGGCTTGGTGAATGCTGCTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR CCA 90 bp | ACTCAGCAGCATTCACCAAGCCCTACTGTGTGCATTGGTTGGGCAAGGGGTGGTGAGCAACATCAGTACTaGGATGCTGCCCCATGGGAT | + |
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Preference number: 4 (lower is better) Translates to: TQQHSPSPTVCIGWARGGEQHQY*DAAPWD Trigger: ATCCCATGGGGCAGCATCCCAGTACTGATGTTGCTC...ACCACCCCTTGCCCAACCAATGCACACAGTAGGGCTTGGTGAATGCTGCTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR CCA 90 bp | TTAGACCACTGTCCCTTGGCCTTGAAGAGTTTATTTACTCATTCACTCAGCAGCTCGAAGCGGATGGTCTaGTCCCGGCGCAGGGGGACG | + |
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Preference number: 4 (lower is better) Translates to: LDHCPLALKSLFTHSLSSSKRMV*SRRRGT Trigger: CGTCCCCCTGCGCCGGGACCAGACCATCCGCTTCGA...GCTGCTGAGTGAATGAGTAAATAAACTCTTCAAGGCCAAGGGACAGTGGTCTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR CCA 90 bp | TTAGACCACTGTCCCTTGGCCTTGAAGAGTTTATTTACTCATTCACTCAGCAGCCGTGGTCGAAGCGGATaGTCTGGTCCCGGCGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LDHCPLALKSLFTHSLSSRGRSG*SGPGAG Trigger: CCCTGCGCCGGGACCAGACCATCCGCTTCGACCACG...GCTGCTGAGTGAATGAGTAAATAAACTCTTCAAGGCCAAGGGACAGTGGTCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR CCA 90 bp | TGCCAGGTGCTGGGACACAGAGTTGAATTAGACCACTGTCCCTTGGCCTTGAAGCCCTACTGTGTGCATTaGTTGGGCAAGGGGTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: CQVLGHRVELDHCPLALKPYCVH*LGKGWC Trigger: ACACCACCCCTTGCCCAACCAATGCACACAGTAGGG...CTTCAAGGCCAAGGGACAGTGGTCTAATTCAACTCTGTGTCCCAGCACCTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR TCA 90 bp | TTAGACCACTGTCCCTTGGCCTTGAAGAGTTTATTTACTCATTCACTCAGCAGCGTGAGGCCACTGGGCTaGGCAGCAGTGGGACCAGGA | + |
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Preference number: 4 (lower is better) Translates to: LDHCPLALKSLFTHSLSSVRPLG*AAVGPG Trigger: TCCTGGTCCCACTGCTGCTCAGCCCAGTGGCCTCAC...GCTGCTGAGTGAATGAGTAAATAAACTCTTCAAGGCCAAGGGACAGTGGTCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR GCA 90 bp | ACTCAGCAGCATTCACCAAGCCCTACTGTGTGCATTGGTTGGGCAAGGGGTGGTTGTTGGCACCCTCCATaGCCAGTAGTGAGTTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: TQQHSPSPTVCIGWARGGCWHPP*PVVSSC Trigger: ACAAGAACTCACTACTGGGCATGGAGGGTGCCAACA...ACCACCCCTTGCCCAACCAATGCACACAGTAGGGCTTGGTGAATGCTGCTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR CCA 90 bp | TTAGACCACTGTCCCTTGGCCTTGAAGAGTTTATTTACTCATTCACTCAGCAGCTGGGCTGAGCAGCAGTaGGACCAGGAGCCGAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: LDHCPLALKSLFTHSLSSWAEQQ*DQEPRA Trigger: GGCTCTCGGCTCCTGGTCCCACTGCTGCTCAGCCCA...GCTGCTGAGTGAATGAGTAAATAAACTCTTCAAGGCCAAGGGACAGTGGTCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR CCA 90 bp | TGCCAGGTGCTGGGACACAGAGTTGAATTAGACCACTGTCCCTTGGCCTTGAAGATGTTGGTGATCACGTaGTCGAAGCGGATGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: CQVLGHRVELDHCPLALKMLVIT*SKRMVW Trigger: CCAGACCATCCGCTTCGACCACGTGATCACCAACAT...CTTCAAGGCCAAGGGACAGTGGTCTAATTCAACTCTGTGTCCCAGCACCTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR CCA 90 bp | TGCCAGGTGCTGGGACACAGAGTTGAATTAGACCACTGTCCCTTGGCCTTGAAGGTGAGTTCTTGTCGGTaGCCTGCAGGAAGACGTTCT | + |
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Preference number: 4 (lower is better) Translates to: CQVLGHRVELDHCPLALKVSSCR*PAGRRS Trigger: AGAACGTCTTCCTGCAGGCCACCGACAAGAACTCAC...CTTCAAGGCCAAGGGACAGTGGTCTAATTCAACTCTGTGTCCCAGCACCTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR CCA 90 bp | TGCCAGGTGCTGGGACACAGAGTTGAATTAGACCACTGTCCCTTGGCCTTGAAGTCAGGCCTCCATATCTaGAAAGAGCAGGAACCCGGA | + |
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Preference number: 4 (lower is better) Translates to: CQVLGHRVELDHCPLALKSGLHI*KEQEPG Trigger: TCCGGGTTCCTGCTCTTTCCAGATATGGAGGCCTGA...CTTCAAGGCCAAGGGACAGTGGTCTAATTCAACTCTGTGTCCCAGCACCTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR CCA 90 bp | TGCCAGGTGCTGGGACACAGAGTTGAATTAGACCACTGTCCCTTGGCCTTGAAGTGGGATGCTGCCCCATaGGATCTTCATCATCATACT | + |
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Preference number: 4 (lower is better) Translates to: CQVLGHRVELDHCPLALKWDAAP*DLHHHT Trigger: AGTATGATGATGAAGATCCCATGGGGCAGCATCCCA...CTTCAAGGCCAAGGGACAGTGGTCTAATTCAACTCTGTGTCCCAGCACCTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR GCA 90 bp | TTAGACCACTGTCCCTTGGCCTTGAAGAGTTTATTTACTCATTCACTCAGCAGCATGGCACTTCTGGTGTaGCAGGTGCTGGGACACAGA | + |
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Preference number: 4 (lower is better) Translates to: LDHCPLALKSLFTHSLSSMALLV*QVLGHR Trigger: TCTGTGTCCCAGCACCTGGCACACCAGAAGTGCCAT...GCTGCTGAGTGAATGAGTAAATAAACTCTTCAAGGCCAAGGGACAGTGGTCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR TCA 90 bp | TTAGACCACTGTCCCTTGGCCTTGAAGAGTTTATTTACTCATTCACTCAGCAGCCATAGTCACAGAAGGTaGCCACCTTCTGTGCACGCT | + |
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Preference number: 4 (lower is better) Translates to: LDHCPLALKSLFTHSLSSHSHRR*PPSVHA Trigger: AGCGTGCACAGAAGGTGGTCACCTTCTGTGACTATG...GCTGCTGAGTGAATGAGTAAATAAACTCTTCAAGGCCAAGGGACAGTGGTCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR CCA 90 bp | TTAGACCACTGTCCCTTGGCCTTGAAGAGTTTATTTACTCATTCACTCAGCAGCAGGCGATTTTCTGGGTaGCCTTGTAGTCTCCCGATT | + |
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Preference number: 4 (lower is better) Translates to: LDHCPLALKSLFTHSLSSRRFSG*PCSLPI Trigger: AATCGGGAGACTACAAGGCCACCCAGAAAATCGCCT...GCTGCTGAGTGAATGAGTAAATAAACTCTTCAAGGCCAAGGGACAGTGGTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR TCA 90 bp | TTAGACCACTGTCCCTTGGCCTTGAAGAGTTTATTTACTCATTCACTCAGCAGCTGTAACCAACATTTCTaGGCATGGCACTTCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: LDHCPLALKSLFTHSLSSCNQHF*AWHFWC Trigger: ACACCAGAAGTGCCATGCTCAGAAATGTTGGTTACA...GCTGCTGAGTGAATGAGTAAATAAACTCTTCAAGGCCAAGGGACAGTGGTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR CAA 90 bp | GGTAGAGTGAGCGTTGCTGGCAGGGGGAGCCGGGGTGGATGTGAAGCAGCCCACGCCCTACTGTGTGCATaGGTTGGGCAAGGGGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: GRVSVAGRGSRGGCEAAHALLCA*VGQGVV Trigger: CACCACCCCTTGCCCAACCAATGCACACAGTAGGGC...GTGGGCTGCTTCACATCCACCCCGGCTCCCCCTGCCAGCAACGCTCACTCTACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS TCA 90 bp | TCACGTGGTCGAAGCGGATGGTCTGGTCCCGGCGCAGGGGGACGTTaGTGGTTCTTGTGGCAGAGAAGGCGATTTTCTGGGTGGCCTTGT | + |
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Preference number: 5 (lower is better) Translates to: SRGRSGWSGPGAGGR*WFLWQRRRFSGWPC Trigger: ACAAGGCCACCCAGAAAATCGCCTTCTCTGCCACAAGAACCATCAACGTCCCCCTGCGCCGGGACCAGACCATCCGCTTCGACCACGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000432749.6 ENST00000509305.6 ENST00000510260.5 |
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| CDS GCA 90 bp | ACTGGGCAGGGGTGTTCCTCAGTGAGCATCATGTGGCGGGCCCGCTaGCTGAGTGCTGGCTTACAGTCAGAGCCTTTGATTCCAATCCCG | + |
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Preference number: 5 (lower is better) Translates to: TGQGCSSVSIMWRAR*LSAGLQSEPLIPIP Trigger: CGGGATTGGAATCAAAGGCTCTGACTGTAAGCCAGCACTCAGGCAGCGGGCCCGCCACATGATGCTCACTGAGGAACACCCCTGCCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510260.5 |
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| CDS GCA 90 bp | AGTAGTGAGTTCTTGTCGGTGGCCTGCAGGAAGACGTTCTCCCCCTaGTCCAGCTTGAGGACCATGCCACCGGTGGTGACCTGGAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: SSEFLSVACRKTFSP*SSLRTMPPVVTWKV Trigger: CACCTTCCAGGTCACCACCGGTGGCATGGTCCTCAAGCTGGAGCAGGGGGAGAACGTCTTCCTGCAGGCCACCGACAAGAACTCACTACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS GCA 90 bp | CTGGAAGGTGTTGTAGGCATAGTCACAGAAGGTGACCACCTTCTGTaGACGCTCCCGGCCACGCATGAGGTTCACGCACAGGTTCCCTCG | + |
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Preference number: 5 (lower is better) Translates to: LEGVVGIVTEGDHLL*TLPATHEVHAQVPS Trigger: CGAGGGAACCTGTGCGTGAACCTCATGCGTGGCCGGGAGCGTGCACAGAAGGTGGTCACCTTCTGTGACTATGCCTACAACACCTTCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432749.6 ENST00000509305.6 |
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| CDS CCA 90 bp | GTGTTCCTCAGTGAGCATCATGTGGCGGGCCCGCTGCCTGAGTGCTaGCTTACAGTCAGAGCCTTTGATTCCAATCCCGCCTCTGCCACT | + |
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Preference number: 5 (lower is better) Translates to: VFLSEHHVAGPLPEC*LTVRAFDSNPASAT Trigger: AGTGGCAGAGGCGGGATTGGAATCAAAGGCTCTGACTGTAAGCCAGCACTCAGGCAGCGGGCCCGCCACATGATGCTCACTGAGGAACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510260.5 |
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| CDS-3UTR CAA 90 bp | TGCCAGGTGCTGGGACACAGAGTTGAATTAGACCACTGTCCCTTGGCCTTGAAGTCTCCCGATTCACCTTaGGGGCCTGGGGCTCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: CQVLGHRVELDHCPLALKSPDSP*GPGAPG Trigger: CCCTGGAGCCCCAGGCCCCAAAGGTGAATCGGGAGA...CTTCAAGGCCAAGGGACAGTGGTCTAATTCAACTCTGTGTCCCAGCACCTGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR CAA 90 bp | ACTCAGCAGCATTCACCAAGCCCTACTGTGTGCATTGGTTGGGCAAGGGGTGGTCGGCGCAGGGGGACGTaGATGGTTCTTGTGGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: TQQHSPSPTVCIGWARGGRRRGT*MVLVAE Trigger: CTCTGCCACAAGAACCATCAACGTCCCCCTGCGCCG...ACCACCCCTTGCCCAACCAATGCACACAGTAGGGCTTGGTGAATGCTGCTGAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR CAA 90 bp | TGCCAGGTGCTGGGACACAGAGTTGAATTAGACCACTGTCCCTTGGCCTTGAAGTCCCCCTGCTCCAGCTaGAGGACCATGCCACCGGTG | + |
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Preference number: 5 (lower is better) Translates to: CQVLGHRVELDHCPLALKSPCSS*RTMPPV Trigger: CACCGGTGGCATGGTCCTCAAGCTGGAGCAGGGGGA...CTTCAAGGCCAAGGGACAGTGGTCTAATTCAACTCTGTGTCCCAGCACCTGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS CCA 90 bp | ATCTTCTTCTACACTGGGCAGGGGTGTTCCTCAGTGAGCATCATGTaGCGGGCCCGCTGCCTGAGTGCTGGCTTACAGTCAGAGCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: IFFYTGQGCSSVSIM*RARCLSAGLQSEPL Trigger: CAAAGGCTCTGACTGTAAGCCAGCACTCAGGCAGCGGGCCCGCCACATGATGCTCACTGAGGAACACCCCTGCCCAGTGTAGAAGAAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510260.5 |
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| CDS CCA 90 bp | AGCCGGGGTGGATGTGAAGCAGCCCACAGGTCAGGCCTCCATATCTaGAAAGAGCAGGAACCCGGAAAAGATGCTGTTGGCACCCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: SRGGCEAAHRSGLHI*KEQEPGKDAVGTLH Trigger: ATGGAGGGTGCCAACAGCATCTTTTCCGGGTTCCTGCTCTTTCCAGATATGGAGGCCTGACCTGTGGGCTGCTTCACATCCACCCCGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS CCA 90 bp | GCCTCCTTTCCATCTCCTTCGGTCCAGCAGTCCCTTTCCGCAACATaGAGTCAGGCCCACTTGACTTTAAAGCCCCATCTGCTACCGGCT | + |
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Preference number: 5 (lower is better) Translates to: ASFPSPSVQQSLSAT*SQAHLTLKPHLLPA Trigger: AGCCGGTAGCAGATGGGGCTTTAAAGTCAAGTGGGCCTGACTCCATGTTGCGGAAAGGGACTGCTGGACCGAAGGAGATGGAAAGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432749.6 |
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| CDS-3UTR CAA 90 bp | ACTCAGCAGCATTCACCAAGCCCTACTGTGTGCATTGGTTGGGCAAGGGGTGGTCCCAGTAGTGAGTTCTaGTCGGTGGCCTGCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: TQQHSPSPTVCIGWARGGPSSEF*SVACRK Trigger: CTTCCTGCAGGCCACCGACAAGAACTCACTACTGGG...ACCACCCCTTGCCCAACCAATGCACACAGTAGGGCTTGGTGAATGCTGCTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS-3UTR CAA 90 bp | ACTCAGCAGCATTCACCAAGCCCTACTGTGTGCATTGGTTGGGCAAGGGGTGGTCCGGAAAAGATGCTGTaGGCACCCTCCATGCCCAGT | + |
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Preference number: 5 (lower is better) Translates to: TQQHSPSPTVCIGWARGGPEKML*APSMPS Trigger: ACTGGGCATGGAGGGTGCCAACAGCATCTTTTCCGG...ACCACCCCTTGCCCAACCAATGCACACAGTAGGGCTTGGTGAATGCTGCTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS GCA 90 bp | CAGGTCAGGCCTCCATATCTGGAAAGAGCAGGAACCCGGAAAAGATaGTGTTGGCACCCTCCATGCCCAGTAGTGAGTTCTTGTCGGTGG | + |
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Preference number: 5 (lower is better) Translates to: QVRPPYLERAGTRKR*CWHPPCPVVSSCRW Trigger: CCACCGACAAGAACTCACTACTGGGCATGGAGGGTGCCAACAGCATCTTTTCCGGGTTCCTGCTCTTTCCAGATATGGAGGCCTGACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS GCA 90 bp | ATGGAGTCAGGCCCACTTGACTTTAAAGCCCCATCTGCTACCGGCTaGATAACCTCAGGCAAGTGCCTTAACCTCTCTGAGCCTCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: MESGPLDFKAPSATG*ITSGKCLNLSEPLG Trigger: GCCAAGAGGCTCAGAGAGGTTAAGGCACTTGCCTGAGGTTATGCAGCCGGTAGCAGATGGGGCTTTAAAGTCAAGTGGGCCTGACTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432749.6 |
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| CDS GCA 90 bp | TATCGATTAGGCCCAGGAGCAGGAGCAACATCAGTACTGGGATGCTaGCCCATGGGATCTTCATCATCATACTGTGTCAGACGCCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: YRLGPGAGATSVLGC*PMGSSSSYCVRRLL Trigger: GAGGAGGCGTCTGACACAGTATGATGATGAAGATCCCATGGGGCAGCATCCCAGTACTGATGTTGCTCCTGCTCCTGGGCCTAATCGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510260.5 |
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| CDS GCA 90 bp | TATCGATTAGGCCCAGGAGCAGGAGCAACATCAGTACTGGGATGCTaGCCCATGGGATCTTCATCATCATACTGTGTCAGACGCCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: YRLGPGAGATSVLGC*PMGSSSSYCVRRLL Trigger: CAGGAGGCGTCTGACACAGTATGATGATGAAGATCCCATGGGGCAGCATCCCAGTACTGATGTTGCTCCTGCTCCTGGGCCTAATCGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS GCA 90 bp | TATCGATTAGGCCCAGGAGCAGGAGCAACATCAGTACTGGGATGCTaGCCCATGGGATCTTCATCATCATACTGTGTCAGACGCCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: YRLGPGAGATSVLGC*PMGSSSSYCVRRLL Trigger: AAGGAGGCGTCTGACACAGTATGATGATGAAGATCCCATGGGGCAGCATCCCAGTACTGATGTTGCTCCTGCTCCTGGGCCTAATCGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432749.6 |
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| CDS GCA 90 bp | AGATATCGATTAGGCCCAGGAGCAGGAGCAACATCAGTACTGGGATaGTGCCCCATGGGATCTTCATCATCATACTGTGTCAGACGCCTC | + |
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Preference number: 5 (lower is better) Translates to: RYRLGPGAGATSVLG*CPMGSSSSYCVRRL Trigger: GAGGCGTCTGACACAGTATGATGATGAAGATCCCATGGGGCAGCATCCCAGTACTGATGTTGCTCCTGCTCCTGGGCCTAATCGATATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000432749.6 ENST00000509305.6 ENST00000510260.5 |
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| CDS TCA 90 bp | CAGTCAGAGCCTTTGATTCCAATCCCGCCTCTGCCACTTGCCAGTTaGTGTGTTGTCAGTCAAGGGAGCCCCAATTTTCTCTGCTATAGG | + |
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Preference number: 5 (lower is better) Translates to: QSEPLIPIPPLPLAS*CVVSQGSPNFLCYR Trigger: CCTATAGCAGAGAAAATTGGGGCTCCCTTGACTGACAACACATCAACTGGCAAGTGGCAGAGGCGGGATTGGAATCAAAGGCTCTGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510260.5 |
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| CDS-3UTR CAA 90 bp | TGCCAGGTGCTGGGACACAGAGTTGAATTAGACCACTGTCCCTTGGCCTTGAAGCACTGTCCCTTGGCCTaGAAGAGTTTATTTACTCAT | + |
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Preference number: 5 (lower is better) Translates to: CQVLGHRVELDHCPLALKHCPLA*KSLFTH Trigger: ATGAGTAAATAAACTCTTCAAGGCCAAGGGACAGTG...CTTCAAGGCCAAGGGACAGTGGTCTAATTCAACTCTGTGTCCCAGCACCTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS GCA 72 bp | GCTGAGCAGCAGTGGGACCAGGAGCCGAGAGCCTACTaGCCTCGGTCCGAAGCGGAAGTTCCCTTCCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: AEQQWDQEPRAY*PRSEAEVPFPR Trigger: TCTGGGGAAGGGAACTTCCGCTTCGGACCGAGGGCAGTAGGCTCTCGGCTCCTGGTCCCACTGCTGCTCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432749.6 |
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| CDS TCA 72 bp | AGTGAGCGTTGCTGGCAGGGGGAGCCGGGGTGGATGTaGAGCAGCCCACAGGTCAGGCCTCCATATCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: SERCWQGEPGWM*SSPQVRPPYLE Trigger: TTCCAGATATGGAGGCCTGACCTGTGGGCTGCTTCACATCCACCCCGGCTCCCCCTGCCAGCAACGCTCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS TCA 72 bp | CGAAGCGGATGGTCTGGTCCCGGCGCAGGGGGACGTTaGTGGTTCTTGTGGCAGAGAAGGCGATTTTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: RSGWSGPGAGGR*WFLWQRRRFSG Trigger: CCCAGAAAATCGCCTTCTCTGCCACAAGAACCATCAACGTCCCCCTGCGCCGGGACCAGACCATCCGCTTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000432749.6 ENST00000509305.6 ENST00000510260.5 |
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| CDS CCA 72 bp | AGTGAGCATCATGTGGCGGGCCCGCTGCCTGAGTGCTaGCTTACAGTCAGAGCCTTTGATTCCAATCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: SEHHVAGPLPEC*LTVRAFDSNPA Trigger: GGCGGGATTGGAATCAAAGGCTCTGACTGTAAGCCAGCACTCAGGCAGCGGGCCCGCCACATGATGCTCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510260.5 |
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| CDS CAA 72 bp | ATGCTGTTGGCACCCTCCATGCCCAGTAGTGAGTTCTaGTCGGTGGCCTGCAGGAAGACGTTCTCCCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: MLLAPSMPSSEF*SVACRKTFSPC Trigger: GCAGGGGGAGAACGTCTTCCTGCAGGCCACCGACAAGAACTCACTACTGGGCATGGAGGGTGCCAACAGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS GCA 72 bp | GTTGTAGGCATAGTCACAGAAGGTGACCACCTTCTGTaGACGCTCCCGGCCACGCATGAGGTTCACGCACAG | + |
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Preference number: 6 (lower is better) Translates to: VVGIVTEGDHLL*TLPATHEVHAQ Trigger: CTGTGCGTGAACCTCATGCGTGGCCGGGAGCGTGCACAGAAGGTGGTCACCTTCTGTGACTATGCCTACAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432749.6 ENST00000509305.6 |
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| CDS GCA 72 bp | GGGTGTTCCTCAGTGAGCATCATGTGGCGGGCCCGCTaGCTGAGTGCTGGCTTACAGTCAGAGCCTTTGATT | + |
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Preference number: 6 (lower is better) Translates to: GCSSVSIMWRAR*LSAGLQSEPLI Trigger: AATCAAAGGCTCTGACTGTAAGCCAGCACTCAGGCAGCGGGCCCGCCACATGATGCTCACTGAGGAACACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510260.5 |
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| CDS CCA 72 bp | TTCATGTTGGTGATCACGTGGTCGAAGCGGATGGTCTaGTCCCGGCGCAGGGGGACGTTGATGGTTCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: FMLVITWSKRMV*SRRRGTLMVLV Trigger: CACAAGAACCATCAACGTCCCCCTGCGCCGGGACCAGACCATCCGCTTCGACCACGTGATCACCAACATGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000432749.6 ENST00000509305.6 ENST00000510260.5 |
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| CDS GCA 72 bp | GCCCCATCTGCTACCGGCTGCATAACCTCAGGCAAGTaGCTTAACCTCTCTGAGCCTCTTGGCAATGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: APSATGCITSGK*LNLSEPLGNAD Trigger: ATCAGCATTGCCAAGAGGCTCAGAGAGGTTAAGGCACTTGCCTGAGGTTATGCAGCCGGTAGCAGATGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432749.6 |
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| CDS CCA 72 bp | CCATCTCCTTCGGTCCAGCAGTCCCTTTCCGCAACATaGAGTCAGGCCCACTTGACTTTAAAGCCCCATCTG | + |
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Preference number: 6 (lower is better) Translates to: PSPSVQQSLSAT*SQAHLTLKPHL Trigger: CAGATGGGGCTTTAAAGTCAAGTGGGCCTGACTCCATGTTGCGGAAAGGGACTGCTGGACCGAAGGAGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432749.6 |
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| CDS GCA 72 bp | GGCCCACTTGACTTTAAAGCCCCATCTGCTACCGGCTaGATAACCTCAGGCAAGTGCCTTAACCTCTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: GPLDFKAPSATG*ITSGKCLNLSE Trigger: CTCAGAGAGGTTAAGGCACTTGCCTGAGGTTATGCAGCCGGTAGCAGATGGGGCTTTAAAGTCAAGTGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432749.6 |
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| CDS GCA 72 bp | GTCAGAGCCTTTGATTCCAATCCCGCCTCTGCCACTTaGCAGTTGATGTGTTGTCAGTCAAGGGAGCCCCAA | + |
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Preference number: 6 (lower is better) Translates to: VRAFDSNPASAT*QLMCCQSREPQ Trigger: TTGGGGCTCCCTTGACTGACAACACATCAACTGGCAAGTGGCAGAGGCGGGATTGGAATCAAAGGCTCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510260.5 |
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| CDS GCA 72 bp | CCTCCATATCTGGAAAGAGCAGGAACCCGGAAAAGATaGTGTTGGCACCCTCCATGCCCAGTAGTGAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: PPYLERAGTRKR*CWHPPCPVVSS Trigger: AGAACTCACTACTGGGCATGGAGGGTGCCAACAGCATCTTTTCCGGGTTCCTGCTCTTTCCAGATATGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509305.6 |
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| CDS TCA 72 bp | CCTTTGATTCCAATCCCGCCTCTGCCACTTGCCAGTTaGTGTGTTGTCAGTCAAGGGAGCCCCAATTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: PLIPIPPLPLAS*CVVSQGSPNFL Trigger: GAGAAAATTGGGGCTCCCTTGACTGACAACACATCAACTGGCAAGTGGCAGAGGCGGGATTGGAATCAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510260.5 |
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