RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C1ORF94 (Homo sapiens)

Ensembl gene IDs: ENSG00000142698

Ensembl transcript IDs: ENST00000373374.7, ENST00000488417.2

Found 312 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTGCCATGTGTaGGGAGGGCTATTTTTGTGTCAGTGTTGGCCAATAGATGAATCT +
Preference number: 1 (lower is better)
Translates to: YEGHVCVCVCSLCHV*GGLFLCQCWPIDES
Trigger: AGATTCATCTATTGGCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACACACACACACACATGACCCTCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
3UTR TCA 90 bp AAACAAAAATCACTCATGTTAGCTAAATATAGATGCATAAGTGGTTaGGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTG +
Preference number: 1 (lower is better)
Translates to: KQKSLMLAKYRCISG*ASKYEYEGHVCVCV
Trigger: CACACACACACACACATGACCCTCATATTCATACTTGCTTGCTCAACCACTTATGCATCTATATTTAGCTAACATGAGTGATTTTTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
3UTR CAA 90 bp TTTTTGTGTCAGTGTTGGCCAATAGATGAATCTGGTCTTGCTGTTTaGTCTGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACC +
Preference number: 2 (lower is better)
Translates to: FLCQCWPIDESGLAV*SVTWSEPCFSKLHT
Trigger: GGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACAGACAAAACAGCAAGACCAGATTCATCTATTGGCCAACACTGACACAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
3UTR-3UTR GCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTTTCATACCAAGCTTTTaGAGAATCCAAAAATCAGAG +
Preference number: 2 (lower is better)
Translates to: EQASMNMRVMCVCVCVACFIPSF*RIQKSE
Trigger: CTCTGATTTTTGGATTCTGCAAAAGCTTGGTATGAA...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
3UTR TCA 72 bp CATGTGTGTGTGTGTGTGTGTAGCTTGTGCCATGTGTaGGGAGGGCTATTTTTGTGTCAGTGTTGGCCAATA +
Preference number: 3 (lower is better)
Translates to: HVCVCVCSLCHV*GGLFLCQCWPI
Trigger: TATTGGCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACACACACACACACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
3UTR-3UTR CAA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTTCTGGTCTTGCTGTTTaGTCTGTGACCTGGTCAGAA +
Preference number: 3 (lower is better)
Translates to: EQASMNMRVMCVCVCVACSGLAV*SVTWSE
Trigger: TTCTGACCAGGTCACAGACAAAACAGCAAGACCAGA...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
3UTR-3UTR CAA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTGACCTGGTCAGAACCTaGCTTTTCCAAACTTCATAC +
Preference number: 3 (lower is better)
Translates to: EQASMNMRVMCVCVCVACDLVRT*LFQTSY
Trigger: GTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTC...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
3UTR TCA 72 bp TCACTCATGTTAGCTAAATATAGATGCATAAGTGGTTaGGCAAGCAAGTATGAATATGAGGGTCATGTGTGT +
Preference number: 3 (lower is better)
Translates to: SLMLAKYRCISG*ASKYEYEGHVC
Trigger: ACACACATGACCCTCATATTCATACTTGCTTGCTCAACCACTTATGCATCTATATTTAGCTAACATGAGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAAGGGCGCAGGGGCCCTTaGCCACCAGGGCCGAGGATG +
Preference number: 4 (lower is better)
Translates to: QKSEPLVLIQGLREEKGEGRRGP*PPGPRM
Trigger: CATCCTCGGCCCTGGTGGCCAAGGGCCCCTGCGCCC...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR CCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCCTCGGCAAGGCAGGCTaGGCCGGGCGGCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGLGKAG*AGRLPP
Trigger: TGGTGGGAGCCGCCCGGCCCAGCCTGCCTTGCCGAG...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR GCA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAATCGCCCTACCCCTCCTaGTCCCGGTCTCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: QKSEPLVLIQGLREEKGESPYPS*SRSPAA
Trigger: AGCAGCGGGAGACCGGGAGCAGGAGGGGTAGGGCGA...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR GCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGCACAGTCCCTGGCACTaGCCCCTTGCGACGCCGCCG +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKHSPWH*PLATPP
Trigger: CGGCGGCGTCGCAAGGGGGCAGTGCCAGGGACTGTG...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR TCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGCTTGCGACGCCGCCGTaGCAACTTTCGGCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKLATPP*QLSAPG
Trigger: CCCAGGCGCCGAAAGTTGTCACGGCGGCGTCGCAAG...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR TCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGGTCCAGGGCTGTaGGGCCTCAGGCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKGGPGL*GLRQAL
Trigger: CAAGGCCTGCCTGAGGCCTCACAGCCCTGGACCTCC...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR GCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCTCCCCTCGGGAGAGCTaGCGGGTACCTCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGSPRES*RVPPAP
Trigger: GGGAGCTGGAGGTACCCGGCAGCTCTCCCGAGGGGA...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAACTCCCGCTGCTGCTCTaGTGCCCCCGGAAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: QKSEPLVLIQGLREEKGELPLLL*CPRKEG
Trigger: CCCTTCTTTCCGGGGGCAGCAGAGCAGCAGCGGGAG...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR GCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGCCGGTCTCCCGCTGCTaGTCTGCTGCCCCCGGAAAG +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKPVSRC*SAAPGK
Trigger: CTTTCCGGGGGCAGCAGAGCAGCAGCGGGAGACCGG...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR CCA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAAGGCATACAAGCGTGTTaGGGGTGGGGACCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: QKSEPLVLIQGLREEKGEGIQAC*GWGPGP
Trigger: CGGGCCTGGTCCCCACCCCCAACACGCTTGTATGCC...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373374.7
CDS-3UTR CCA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAACCACAGGCGTCCTTCTaGCTCTGGGGCCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: QKSEPLVLIQGLREEKGEPQASF*LWGHWL
Trigger: CAGCCAGTGGCCCCAGAGCCAGAAGGACGCCTGTGG...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCAGCCACGCGGAGGACTaGGTGCGGGCCTGGCACCAT +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGSHAED*VRAWHH
Trigger: ATGGTGCCAGGCCCGCACCCAGTCCTCCGCGTGGCT...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR GCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGCTGGCACTGCCCCCTTaGGACGCCGCCGTGACAACT +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKLALPP*DAAVTT
Trigger: AGTTGTCACGGCGGCGTCGCAAGGGGGCAGTGCCAG...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR CCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGCCACAGGCGTCCTTCTaGCTCTGGGGCCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKPQASF*LWGHWL
Trigger: CAGCCAGTGGCCCCAGAGCCAGAAGGACGCCTGTGG...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAAGACTGGGTGCGGGCCTaGCACCATTGTAGGCACTCG +
Preference number: 4 (lower is better)
Translates to: QKSEPLVLIQGLREEKGEDWVRA*HHCRHS
Trigger: CGAGTGCCTACAATGGTGCCAGGCCCGCACCCAGTC...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR CCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCTCTCCCCACAGTCCCTaGCACTGCCCCCTTGCGACG +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGSPHSP*HCPLAT
Trigger: CGTCGCAAGGGGGCAGTGCCAGGGACTGTGGGGAGA...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR CCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCCTGGAAGGGGAGGGCTaGCTCTCCCCACAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGLEGEG*LSPQSL
Trigger: CAGGGACTGTGGGGAGAGCCAGCCCTCCCCTTCCAG...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR TCA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAAGCTTGTCTCCGACAATaGTGGAGGCTCTGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: QKSEPLVLIQGLREEKGEACLRQ*WRLWGA
Trigger: AGCGCCCCAGAGCCTCCATCATTGTCGGAGACAAGC...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCGAGCTTGTCAGGACGTaGAGGAGGAGGTCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGELVRT*RRRSGR
Trigger: CCTCCCCGACCTCCTCCTGCACGTCCTGACAAGCTC...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAAGGGTCAGTGATGCGGTaGCCACTGCGTCACAGCAAC +
Preference number: 4 (lower is better)
Translates to: QKSEPLVLIQGLREEKGEGSVMR*PLRHSN
Trigger: GTTGCTGTGACGCAGTGGGCACCGCATCACTGACCC...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCTCTCGGCTGCCCGCTTaGGTTCTTGGTGGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGSRLPA*VLGGPK
Trigger: CTTGGGGCCACCAAGAACCCAAGCGGGCAGCCGAGA...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAACCTCGCTGCCTGCTGTaGGTACAGGCCCTGATACTG +
Preference number: 4 (lower is better)
Translates to: QKSEPLVLIQGLREEKGEPRCLL*VQALIL
Trigger: CAGTATCAGGGCCTGTACCCACAGCAGGCAGCGAGG...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAACAGGAGGCGCTCGCCTaGGCGTTCCCAGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAEQEALA*AFPGSP
Trigger: GGGGCTCCCTGGGAACGCCCAGGCGAGCGCCTCCTG...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR CCA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAAGGATCCAGATGTATCTaGGGAATGGGCCCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: QKSEPLVLIQGLREEKGEGSRCI*GMGPGR
Trigger: GCGCCCTGGGCCCATTCCCCAGATACATCTGGATCC...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR TCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTCCAGGCCCGCGATTCTaGGGAGATTCGCCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACPGPRF*GDSPAQ
Trigger: CTGGGCGGGCGAATCTCCTCAGAATCGCGGGCCTGG...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373374.7
CDS-3UTR TCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTGGCTGGTGGGAAGGCTaGGCCCTCTCTTTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACGWWEG*ALSFGG
Trigger: GCCCCCGAAAGAGAGGGCTCAGCCTTCCCACCAGCC...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373374.7
CDS-3UTR TCA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAAGGGCGGCAGGGTCAGTaGTGCGGTGCCCACTGCGTC +
Preference number: 4 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAEGRQGQ*CGAHCV
Trigger: GACGCAGTGGGCACCGCATCACTGACCCTGCCGCCC...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR TCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTGGCTCAAGAGCGCGCTaGCTCGGCAAGGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACGSRAR*LGKAGW
Trigger: CCAGCCTGCCTTGCCGAGTCAGCGCGCTCTTGAGCC...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR GCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGTGGGGCGCTCATTACTaGCTGCCACTAGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKWGAHY*LPLEEG
Trigger: CCCCTCCTCTAGTGGCAGGCAGTAATGAGCGCCCCA...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGTGGAGTCACCTAGGATaGGGCCCCTGTCCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKWSHLG*GPCPLS
Trigger: GGACAGAGGACAGGGGCCGCATCCTAGGTGACTCCA...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCGGGTCAGTGATGCGGTaGCCACTGCGTCACAGCAAC +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGGSVMR*PLRHSN
Trigger: GTTGCTGTGACGCAGTGGGCACCGCATCACTGACCC...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAACTCCCGGTCTCCCGCTaGTGCTCTGCTGCCCCCGGA +
Preference number: 4 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAELPVSR*CSAAPG
Trigger: TCCGGGGGCAGCAGAGCAGCAGCGGGAGACCGGGAG...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR GCA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAAGGAACAGTGGAATGCTaGGGAGCTCAGGAACCAGGC +
Preference number: 4 (lower is better)
Translates to: QKSEPLVLIQGLREEKGEGTVEC*GAQEPG
Trigger: GCCTGGTTCCTGAGCTCCGCAGCATTCCACTGTTCC...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR CCA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAAGCTGAGTCTGGACAATaGGAAGGGAGAAGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: QKSEPLVLIQGLREEKGEAESGQ*EGRSPL
Trigger: GAGGGGGCTTCTCCCTTCCCATTGTCCAGACTCAGC...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373374.7
CDS-3UTR CCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGTGGCTCTGGGGCCACTaGCTGAGAAAGAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKWLWGH*LRKRLP
Trigger: AGGGAGCCTCTTTCTCAGCCAGTGGCCCCAGAGCCA...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCGCGTCCTTCTGGCTCTaGGGCCACTGGCTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGASFWL*GHWLRK
Trigger: CTTTCTCAGCCAGTGGCCCCAGAGCCAGAAGGACGC...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCGGGATGAGGCGTGTGTaGATGGGCCCACAGCCCTTA +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGGMRRV*MGPQPL
Trigger: TAAGGGCTGTGGGCCCATCCACACACGCCTCATCCC...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR CCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGACAACTTTCGGCGCCTaGGCTCAGCCCATGCTGTCC +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKTTFGA*AQPMLS
Trigger: GGACAGCATGGGCTGAGCCCAGGCGCCGAAAGTTGT...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR TCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGCATCTTTGCCACTGCTaGGCTCCAGAGCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKHLCHC*APELAG
Trigger: GCCAGCAAGCTCTGGAGCTCAGCAGTGGCAAAGATG...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373374.7
CDS-3UTR TCA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAAGGGCGGCAGGGTCAGTaGTGCGGTGCCCACTGCGTC +
Preference number: 4 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKGRQGQ*CGAHCV
Trigger: GACGCAGTGGGCACCGCATCACTGACCCTGCCGCCC...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCAAGCCCCCTCCTCACTaGCCCGGGAACATAAAGCAG +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGKPPPH*PGNIKQ
Trigger: CTGCTTTATGTTCCCGGGGCAGTGAGGAGGGGGCTT...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373374.7
CDS-3UTR GCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCCGGCTCCCACCAATTTaGCTGCCAGTAGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGRLPPI*LPVAPT
Trigger: TGTGGGAGCTACTGGCAGGCAAATTGGTGGGAGCCG...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR CCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGCCCGCTTGGGTTCTTaGTGGCCCCAAGGAACTCAT +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKARLGS*WPQGTH
Trigger: ATGAGTTCCTTGGGGCCACCAAGAACCCAAGCGGGC...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGAGGGTCTCGGGGGTTaGCAGACATCTTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKEGLGG*QTSLEV
Trigger: CACCTCCAAAGATGTCTGCCAACCCCCGAGACCCTC...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCGAGGGTCTCGGGGGTTaGCAGACATCTTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGEGLGG*QTSLEV
Trigger: CACCTCCAAAGATGTCTGCCAACCCCCGAGACCCTC...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCGAAGCCCATTCCCGCTaGCCATCCTCCTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGEAHSR*PSSSSL
Trigger: AAGAGAGGAGGAGGATGGCCAGCGGGAATGGGCTTC...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR CCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTGATGTATCTGGGGAATaGGCCCAGGGCGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACDVSGE*AQGAGA
Trigger: GGCCCCTGCGCCCTGGGCCCATTCCCCAGATACATC...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR TCA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAACTGGTTCAGGGTTGCTaGGGTCATGGCTGTAGGAAA +
Preference number: 4 (lower is better)
Translates to: QKSEPLVLIQGLREEKGELVQGC*GHGCRK
Trigger: TTTCCTACAGCCATGACCTCAGCAACCCTGAACCAG...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR TCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTCCCGGAAAGAAGGGATaGGGCGTGTGTGGATGGGCC +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACPGKKG*GVCGWA
Trigger: GGCCCATCCACACACGCCTCATCCCTTCTTTCCGGG...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR GCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGAAGAGCGGAAGATCTaGTGTCCCATCTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKEERKI*CPICCG
Trigger: CCCACAGCAGATGGGACAGCAGATCTTCCGCTCTTC...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAACAAGCGTGTTGGGGGTaGGGACCAGGCCCGCGATTC +
Preference number: 4 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAEQACWG*GPGPRF
Trigger: GAATCGCGGGCCTGGTCCCCACCCCCAACACGCTTG...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373374.7
CDS-3UTR CCA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAAAGGGAGCCAGCTCTCTaGTCCCCTCGGGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAEREPAL*SPRESC
Trigger: GCAGCTCTCCCGAGGGGACCAGAGAGCTGGCTCCCT...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAAATGGGCTCAGCCCTGTaGGCTCCTTGGGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAEMGSAL*APWVQG
Trigger: GCCCTGGACCCAAGGAGCCCACAGGGCTGAGCCCAT...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAAGATCTTGGCAAACACTaGGAGCTGCCTCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: QKSEPLVLIQGLREEKGEDLGKH*ELPLLS
Trigger: GCTCAGAAGAGGCAGCTCCCAGTGTTTGCCAAGATC...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAAGCTTGGAACAGATCTTaGCAAACACTGGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QKSEPLVLIQGLREEKGEAWNRS*QTLGAA
Trigger: GGCAGCTCCCAGTGTTTGCCAAGATCTGTTCCAAGC...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTTCTCGGCTGCCCGCTTaGGTTCTTGGTGGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACSRLPA*VLGGPK
Trigger: CTTGGGGCCACCAAGAACCCAAGCGGGCAGCCGAGA...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCTTGAGCCAGAGTGGCTaGTTCAGGGTTGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGLSQSG*FRVAEV
Trigger: GACCTCAGCAACCCTGAACCAGCCACTCTGGCTCAA...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAAGATGAGGATGGGGCTTaGCAGAAGTGGGTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: QKSEPLVLIQGLREEKGEDEDGA*QKWVSS
Trigger: AGAACTGACCCACTTCTGCCAAGCCCCATCCTCATC...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR TCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCGTAGGAAGTCCTTGGTaGCCCTTGTCTTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGVGSPW*PLSCPA
Trigger: TGCTGGACAAGACAAGGGTCACCAAGGACTTCCTAC...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR TCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCCTGGTTCAGGGTTGCTaGGGTCATGGCTGTAGGAAA +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGLVQGC*GHGCRK
Trigger: TTTCCTACAGCCATGACCTCAGCAACCCTGAACCAG...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR TCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGTGGATAGTTCAGGTTaGGCCAGAGTGGCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKVDSSG*ARVAGS
Trigger: TGAACCAGCCACTCTGGCTCAACCTGAACTATCCAC...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR TCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCTGTGGGTACAGGCCCTaGTACTGCAAGAAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGCGYRP*YCKKVE
Trigger: CTCTACCTTCTTGCAGTATCAGGGCCTGTACCCACA...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCCTGAGGAGTTCTGGCTaGTTCGGTTGGTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGLRSSG*FGWFLA
Trigger: TGCCAAGAACCAACCGAAGCAGCCAGAACTCCTCAG...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373374.7
CDS-3UTR GCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGTCGACCAGGATCGAGTaGTCTTTGGTGAGGCTTAGG +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKSTRIE*SLVRLR
Trigger: CCTAAGCCTCACCAAAGAGCACTCGATCCTGGTCGA...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTTGGGGCGCTCATTACTaGCTGCCACTAGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACWGAHY*LPLEEG
Trigger: CCCCTCCTCTAGTGGCAGGCAGTAATGAGCGCCCCA...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTTGGAGTCACCTAGGATaGGGCCCCTGTCCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACWSHLG*GPCPLS
Trigger: GGACAGAGGACAGGGGCCGCATCCTAGGTGACTCCA...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAAGAGCTTGTCAGGACGTaGAGGAGGAGGTCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAEELVRT*RRRSGR
Trigger: CCTCCCCGACCTCCTCCTGCACGTCCTGACAAGCTC...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTATAGGGCATCCTCGCTaGCTGCTGTGGGTACAGGCC +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACIGHPR*LLWVQA
Trigger: GGCCTGTACCCACAGCAGGCAGCGAGGATGCCCTAT...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGTGGGGAAAGAGGTACTaGGGTCCATCTCCTGCCATT +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKWGKRY*GPSPAI
Trigger: AATGGCAGGAGATGGACCGCAGTACCTCTTTCCCCA...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCTGGGGAAAGAGGTACTaGGGTCCATCTCCTGCCATT +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGWGKRY*GPSPAI
Trigger: AATGGCAGGAGATGGACCGCAGTACCTCTTTCCCCA...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAACCGCTGCTGCTCTGCTaGCCCCGGAAAGAAGGGATG +
Preference number: 4 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAEPLLLC*PRKEGM
Trigger: CATCCCTTCTTTCCGGGGGCAGCAGAGCAGCAGCGG...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR GCA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAACCCCGGCCCAGGTCCTaGTTTTCTCTCGCCCTACCC +
Preference number: 4 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKPRPRS*FSLALP
Trigger: GGGTAGGGCGAGAGAAAAGCAGGACCTGGGCCGGGG...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR GCA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAACCTGGGCTCAGCCCATaGTGTCCCGCTAAGCCACGC +
Preference number: 4 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKPGLSP*CPAKPR
Trigger: GCGTGGCTTAGCGGGACAGCATGGGCTGAGCCCAGG...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR CCA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAAAGGGAGCCAGCTCTCTaGTCCCCTCGGGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKREPAL*SPRESC
Trigger: GCAGCTCTCCCGAGGGGACCAGAGAGCTGGCTCCCT...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGCCTTGGATGTCTCAGTaGACTTCAGTGGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKPWMSQ*TSVGTG
Trigger: CCCAGTTCCCACTGAAGTCCACTGAGACATCCAAGG...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAAATGGGCTCAGCCCTGTaGGCTCCTTGGGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKMGSAL*APWVQG
Trigger: GCCCTGGACCCAAGGAGCCCACAGGGCTGAGCCCAT...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGATCTTGGCAAACACTaGGAGCTGCCTCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKDLGKH*ELPLLS
Trigger: GCTCAGAAGAGGCAGCTCCCAGTGTTTGCCAAGATC...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCGCTTGGAACAGATCTTaGCAAACACTGGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGAWNRS*QTLGAA
Trigger: GGCAGCTCCCAGTGTTTGCCAAGATCTGTTCCAAGC...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGCGCTTGGGTTCTTGGTaGCCCCAAGGAACTCATAGA +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKRLGSW*PQGTHR
Trigger: TCTATGAGTTCCTTGGGGCCACCAAGAACCCAAGCG...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAAGAACACTGGTGGAGGTaGATAGTTCAGGTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: QKSEPLVLIQGLREEKGEEHWWR*IVQVEP
Trigger: TGGCTCAACCTGAACTATCCACCTCCACCAGTGTTC...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTCCTCGCTGCCTGCTGTaGGTACAGGCCCTGATACTG +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACPRCLL*VQALIL
Trigger: CAGTATCAGGGCCTGTACCCACAGCAGGCAGCGAGG...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAACTGCTGTGGGTTGTATaGCATCACCTGTTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: QKSEPLVLIQGLREEKGELLWVV*HHLLGV
Trigger: TACTCCCAACAGGTGATGCCATACAACCCACAGCAG...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCCTGTCCCATCTGCTGTaGGTTGTATGGCATCACCTG +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGLSHLL*VVWHHL
Trigger: CAGGTGATGCCATACAACCCACAGCAGATGGGACAG...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGCCGAACCCATATCCTTaGGGAAAGAGGTACTGCGGT +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKPNPYP*GKRYCG
Trigger: ACCGCAGTACCTCTTTCCCCAAGGATATGGGTTCGG...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGTGGGTCAGTTCTGTCTaGCTTTCGCTCCAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKWVSSV*LSLQQG
Trigger: ACCTTGCTGGAGCGAAAGCCAGACAGAACTGACCCA...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR CCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTCAGAGAGCTGCTCCATaGAGGTCCAGGGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACQRAAP*RSRAVR
Trigger: CCTCACAGCCCTGGACCTCCATGGAGCAGCTCTCTG...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR TCA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCCCTTGCTGCTCTTaGCCTCGGCGGCACACAGAA +
Preference number: 4 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAESPCCS*PRRHTE
Trigger: TTCTGTGTGCCGCCGAGGTCAAGAGCAGCAAGGGGA...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR TCA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAAAGCTTGTGCCATGTGTaGGGAGGGCTATTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: QKSEPLVLIQGLREEKGESLCHV*GGLFLC
Trigger: ACACAAAAATAGCCCTCCTCACACATGGCACAAGCT...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGTTTTTGGCTCCTTGGTaGCAGGGCTCCATTCCATCA +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKFLAPW*QGSIPS
Trigger: TGATGGAATGGAGCCCTGGCACCAAGGAGCCAAAAA...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAAATAGGGCATCCTCGCTaGCTGCTGTGGGTACAGGCC +
Preference number: 4 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAEIGHPR*LLWVQA
Trigger: GGCCTGTACCCACAGCAGGCAGCGAGGATGCCCTAT...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGATCTGCTGTCCCATCTaGTGTGGGTTGTATGGCATC +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKICCPI*CGLYGI
Trigger: GATGCCATACAACCCACAGCAGATGGGACAGCAGAT...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGTTAGGAACAGTGGAATaGTGCGGAGCTCAGGAACCA +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKLGTVE*CGAQEP
Trigger: TGGTTCCTGAGCTCCGCAGCATTCCACTGTTCCTAA...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR CCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGACTTCAGTGGGAACTaGGACAGAAGCTTGCTGACT +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKDFSGN*DRSLLT
Trigger: AGTCAGCAAGCTTCTGTCCCAGTTCCCACTGAAGTC...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGCTCAGTGGACTTCAGTaGGAACTGGGACAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKLSGLQ*ELGQKL
Trigger: AAGCTTCTGTCCCAGTTCCCACTGAAGTCCACTGAG...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAACAAGTTCTTCTCGGCTaGACATGTAGGTTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: QKSEPLVLIQGLREEKGEQVLLG*TCRFLG
Trigger: CCCAAGAAACCTACATGTCCAGCCGAGAAGAACTTG...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCGTTGGCAGACATCTTTaGAGGTGTCCTCTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGVGRHL*RCPLRV
Trigger: TACCCTCAGAGGACACCTCCAAAGATGTCTGCCAAC...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAACAGGAACCAGGCGCCTaGGCGGGCAGAATGACATCT +
Preference number: 4 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAEQEPGA*AGRMTS
Trigger: AGATGTCATTCTGCCCGCCCAGGCGCCTGGTTCCTG...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR CCA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAAAGGACAGCTTTCTTTTaGGGAGGGGAGGGCTTATTT +
Preference number: 4 (lower is better)
Translates to: QKSEPLVLIQGLREEKGERTAFF*GGEGLF
Trigger: AAATAAGCCCTCCCCTCCCCAAAAGAAAGCTGTCCT...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR TCA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAAGCTTGTCTCCGACAATaGTGGAGGCTCTGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKACLRQ*WRLWGA
Trigger: AGCGCCCCAGAGCCTCCATCATTGTCGGAGACAAGC...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR TCA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATGGGTCCAGGGCCACTaGACAGGTTGTCCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAEWVQGH*TGCPVG
Trigger: TCCTACAGGACAACCTGTTCAGTGGCCCTGGACCCA...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR TCA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAACCTGGGCGGGCAGAATaGCATCTGGGAACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKPGRAE*HLGTAG
Trigger: TCCAGCTGTTCCCAGATGTCATTCTGCCCGCCCAGG...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR TCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCTCCAGAGCTTCTTCTTaGAAGCTGAGCTCATTGCCT +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGSRASS*KLSSLP
Trigger: AGGCAATGAGCTCAGCTTTCAAGAAGAAGCTCTGGA...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR GCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTGGCATGGCCACCTTCTaGTTCAGAAGCTTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACGMATF*FRSLSP
Trigger: CGGAGACAAGCTTCTGAAGCAGAAGGTGGCCATGCC...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCAGAAGCTTGCTGACTTaGAAGTTGGAGTCACCTAGG +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGRSLLT*KLESPR
Trigger: CCTAGGTGACTCCAACTTGCAAGTCAGCAAGCTTCT...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTTTTCGAAGTCTCGGCTaGCCGCTTGGGTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACFRSLG*PLGFLV
Trigger: CACCAAGAACCCAAGCGGGCAGCCGAGACTTCGAAA...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAAACAGGGACAGAGAGCTaGTCCATGGAGGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKTGTES*SMEVQG
Trigger: GCCCTGGACCTCCATGGAGCAGCTCTCTGTCCCTGT...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR CCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTAGCTCCAGAGCTTGCTaGCGTAGTCAGTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACSSRAC*RSQSLP
Trigger: AGGAAGGGACTGACTACGCCAGCAAGCTCTGGAGCT...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373374.7
CDS-3UTR CCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTCTCCATTCCATCAAGTaGTGCCTCTCCACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACLHSIK*CLSTAG
Trigger: CCCTGCTGTGGAGAGGCACCACTTGATGGAATGGAG...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAAGCGTCCTTCTGGCTCTaGGGCCACTGGCTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKASFWL*GHWLRK
Trigger: CTTTCTCAGCCAGTGGCCCCAGAGCCAGAAGGACGC...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCCAAGTTCTTCTCGGCTaGACATGTAGGTTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGQVLLG*TCRFLG
Trigger: CCCAAGAAACCTACATGTCCAGCCGAGAAGAACTTG...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTTTGAGCCAGAGTGGCTaGTTCAGGGTTGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACLSQSG*FRVAEV
Trigger: GACCTCAGCAACCCTGAACCAGCCACTCTGGCTCAA...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTGGGGCTTGGCAGAAGTaGGTCAGTTCTGTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACGAWQK*VSSVWL
Trigger: AAGCCAGACAGAACTGACCCACTTCTGCCAAGCCCC...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR TCA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAACTCTCTTTCGGGGGCTaGGTCTGGACAATGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKLSFGG*VWTMGR
Trigger: CCTTCCCATTGTCCAGACTCAGCCCCCGAAAGAGAG...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373374.7
CDS-3UTR TCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTGGGACAGAAGCTTGCTaGCTTGCAAGTTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACGTEAC*LASWSH
Trigger: GTGACTCCAACTTGCAAGTCAGCAAGCTTCTGTCCC...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR TCA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAATGGGTCCAGGGCCACTaGACAGGTTGTCCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKWVQGH*TGCPVG
Trigger: TCCTACAGGACAACCTGTTCAGTGGCCCTGGACCCA...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR TCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTGCCTCAGGCAGGCCTTaGACTCTCTTCCAGATTTCA +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACASGRP*TLFQIS
Trigger: TGAAATCTGGAAGAGAGTTCAAGGCCTGCCTGAGGC...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR GCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTTCGACCAGGATCGAGTaGTCTTTGGTGAGGCTTAGG +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACSTRIE*SLVRLR
Trigger: CCTAAGCCTCACCAAAGAGCACTCGATCCTGGTCGA...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCTGGCTGCTTCGGTTaGTTCTTGGCACCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAESGCFG*FLAPSK
Trigger: CTTGCTGGGTGCCAAGAACCAACCGAAGCAGCCAGA...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373374.7
CDS-3UTR CCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCATTCGTGAACACTGGTaGAGGTGGATAGTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGIREHW*RWIVQV
Trigger: AACCTGAACTATCCACCTCCACCAGTGTTCACGAAT...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAAGGCCTTCTATTTGTGTaGGAGGGGTGGGTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKGLLFV*EGWVED
Trigger: GTCCTCCACCCACCCCTCCCACACAAATAGAAGGCC...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR CCA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATGGGGTGTGTCCTGGTaGATCCAGATGTATCTGGGG +
Preference number: 4 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAEWGVSW*IQMYLG
Trigger: CCCCAGATACATCTGGATCCACCAGGACACACCCCA...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR CCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTTTGTCTAGGCTGTCTTaGGGTGTGTCCTGGTGGATC +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACLSRLS*GVSWWI
Trigger: GATCCACCAGGACACACCCCAAGACAGCCTAGACAA...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR CCA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGCTCTTCCAGATTTCATaGCAAGTCTTGTCTAGGCTG +
Preference number: 4 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKLFQIS*QVLSRL
Trigger: CAGCCTAGACAAGACTTGCCATGAAATCTGGAAGAG...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR TCA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAAGGGACAGAAGCTTGCTaGCTTGCAAGTTGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAEGTEAC*LASWSH
Trigger: GTGACTCCAACTTGCAAGTCAGCAAGCTTCTGTCCC...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAATTTCGAAGTCTCGGCTaGCCGCTTGGGTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKFRSLG*PLGFLV
Trigger: CACCAAGAACCCAAGCGGGCAGCCGAGACTTCGAAA...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTATCTGCTGTCCCATCTaGTGTGGGTTGTATGGCATC +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACICCPI*CGLYGI
Trigger: GATGCCATACAACCCACAGCAGATGGGACAGCAGAT...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAAGAAGAGCGGAAGATCTaGTGTCCCATCTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKEERKI*CPICCG
Trigger: CCCACAGCAGATGGGACAGCAGATCTTCCGCTCTTC...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTCTCAGTGGACTTCAGTaGGAACTGGGACAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACLSGLQ*ELGQKL
Trigger: AAGCTTCTGTCCCAGTTCCCACTGAAGTCCACTGAG...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAACCTTGGATGTCTCAGTaGACTTCAGTGGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAEPWMSQ*TSVGTG
Trigger: CCCAGTTCCCACTGAAGTCCACTGAGACATCCAAGG...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTCTGCTGTGGGTTGTATaGCATCACCTGTTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACLLWVV*HHLLGV
Trigger: TACTCCCAACAGGTGATGCCATACAACCCACAGCAG...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAACTGTCCCATCTGCTGTaGGTTGTATGGCATCACCTG +
Preference number: 4 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAELSHLL*VVWHHL
Trigger: CAGGTGATGCCATACAACCCACAGCAGATGGGACAG...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAACCGAACCCATATCCTTaGGGAAAGAGGTACTGCGGT +
Preference number: 4 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAEPNPYP*GKRYCG
Trigger: ACCGCAGTACCTCTTTCCCCAAGGATATGGGTTCGG...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR TCA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAATGTGGGTACAGGCCCTaGTACTGCAAGAAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKCGYRP*YCKKVE
Trigger: CTCTACCTTCTTGCAGTATCAGGGCCTGTACCCACA...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR TCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTAGCTTGTGCCATGTGTaGGGAGGGCTATTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACSLCHV*GGLFLC
Trigger: ACACAAAAATAGCCCTCCTCACACATGGCACAAGCT...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR TCA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAAAGATGCATAAGTGGTTaGGCAAGCAAGTATGAATAT +
Preference number: 4 (lower is better)
Translates to: QKSEPLVLIQGLREEKGERCISG*ASKYEY
Trigger: ATATTCATACTTGCTTGCTCAACCACTTATGCATCT...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATTTTTGGCTCCTTGGTaGCAGGGCTCCATTCCATCA +
Preference number: 4 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAEFLAPW*QGSIPS
Trigger: TGATGGAATGGAGCCCTGGCACCAAGGAGCCAAAAA...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTTTCACTGAGGAGTTCTaGCTGCTTCGGTTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACFTEEF*LLRLVL
Trigger: AAGAACCAACCGAAGCAGCCAGAACTCCTCAGTGAA...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373374.7
CDS-3UTR CCA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAACGCTTGGGTTCTTGGTaGCCCCAAGGAACTCATAGA +
Preference number: 4 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKRLGSW*PQGTHR
Trigger: TCTATGAGTTCCTTGGGGCCACCAAGAACCCAAGCG...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAAGAACACTGGTGGAGGTaGATAGTTCAGGTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAEEHWWR*IVQVEP
Trigger: TGGCTCAACCTGAACTATCCACCTCCACCAGTGTTC...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAATTTTTGTGTCAGTGTTaGCCAATAGATGAATCTGGT +
Preference number: 4 (lower is better)
Translates to: QKSEPLVLIQGLREEKGEFLCQC*PIDESG
Trigger: ACCAGATTCATCTATTGGCCAACACTGACACAAAAA...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR TCA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAATCGAGTGCTCTTTGGTaGGGCTTAGGAACTCCTGTT +
Preference number: 4 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKSSALW*GLGTPV
Trigger: AACAGGAGTTCCTAAGCCTCACCAAAGAGCACTCGA...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAAAGAAGCTTGCTGACTTaGAAGTTGGAGTCACCTAGG +
Preference number: 4 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAERSLLT*KLESPR
Trigger: CCTAGGTGACTCCAACTTGCAAGTCAGCAAGCTTCT...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAAAGATCTAAAAGTTTATaGCATTCCCACTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: QKSEPLVLIQGLREEKGERSKSL*HSHWKK
Trigger: TTTCTTCCAGTGGGAATGGCATAAACTTTTAGATCT...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAAGTTGGCAGACATCTTTaGAGGTGTCCTCTGAGGGTA +
Preference number: 4 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKVGRHL*RCPLRV
Trigger: TACCCTCAGAGGACACCTCCAAAGATGTCTGCCAAC...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAATCTTGGGGTGTGTCCTaGTGGATCCAGATGTATCTG +
Preference number: 4 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKSWGVS*WIQMYL
Trigger: CAGATACATCTGGATCCACCAGGACACACCCCAAGA...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR TCA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAACTTCTTCTTGAAAGCTaGGCTCATTGCCTCTTAGAG +
Preference number: 4 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAELLLES*AHCLLE
Trigger: CTCTAAGAGGCAATGAGCTCAGCTTTCAAGAAGAAG...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR GCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCAGATCTAAAAGTTTATaGCATTCCCACTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGRSKSL*HSHWKK
Trigger: TTTCTTCCAGTGGGAATGGCATAAACTTTTAGATCT...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCTTCATACCAAGCTTTTaGAGAATCCAAAAATCAGAG +
Preference number: 4 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGFIPSF*RIQKSE
Trigger: CTCTGATTTTTGGATTCTGCAAAAGCTTGGTATGAA...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAAGTGATTCGTGAACACTaGTGGAGGTGGATAGTTCAG +
Preference number: 4 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKVIREH*WRWIVQ
Trigger: CTGAACTATCCACCTCCACCAGTGTTCACGAATCAC...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTTTATGCCATTCCCACTaGAAGAAAAATAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACLCHSH*KKNRGC
Trigger: ACAGCCCCTATTTTTCTTCCAGTGGGAATGGCATAA...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATTATGCCATTCCCACTaGAAGAAAAATAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAELCHSH*KKNRGC
Trigger: ACAGCCCCTATTTTTCTTCCAGTGGGAATGGCATAA...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAAGTTTTGTCTGTGACCTaGTCAGAACCTTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKVLSVT*SEPCFS
Trigger: GGAAAAGCAAGGTTCTGACCAGGTCACAGACAAAAC...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR TCA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTAGATGCATAAGTGGTTaGGCAAGCAAGTATGAATAT +
Preference number: 4 (lower is better)
Translates to: EQASMNMRVMCVCVCVACRCISG*ASKYEY
Trigger: ATATTCATACTTGCTTGCTCAACCACTTATGCATCT...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CCA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAATTTTTGTGTCAGTGTTaGCCAATAGATGAATCTGGT +
Preference number: 4 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKFLCQC*PIDESG
Trigger: ACCAGATTCATCTATTGGCCAACACTGACACAAAAA...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR GCA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAATTCATACCAAGCTTTTaGAGAATCCAAAAATCAGAG +
Preference number: 4 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKFIPSF*RIQKSE
Trigger: CTCTGATTTTTGGATTCTGCAAAAGCTTGGTATGAA...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS TCA 90 bp CTGCCAGGCGGGCACCGGGAAGGGCCCAGCGGCTCAAGAGCGCGCTaGCTCGGCAAGGCAGGCTGGGCCGGGCGGCTCCCACCAATTTGC +
Preference number: 5 (lower is better)
Translates to: LPGGHREGPSGSRAR*LGKAGWAGRLPPIC
Trigger: GCAAATTGGTGGGAGCCGCCCGGCCCAGCCTGCCTTGCCGAGTCAGCGCGCTCTTGAGCCGCTGGGCCCTTCCCGGTGCCCGCCTGGCAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS TCA 90 bp GGCTCTCCCCACAGTCCCTGGCACTGCCCCCTTGCGACGCCGCCGTaGCAACTTTCGGCGCCTGGGCTCAGCCCATGCTGTCCCGCTAAG +
Preference number: 5 (lower is better)
Translates to: GSPHSPWHCPLATPP*QLSAPGLSPCCPAK
Trigger: CTTAGCGGGACAGCATGGGCTGAGCCCAGGCGCCGAAAGTTGTCACGGCGGCGTCGCAAGGGGGCAGTGCCAGGGACTGTGGGGAGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS GCA 90 bp GGGCAAGAATGCAGGGAGCCAGCTCTCTGGTCCCCTCGGGAGAGCTaGCGGGTACCTCCAGCTCCCCAGAACTCTCTTCGACCAGGATCG +
Preference number: 5 (lower is better)
Translates to: GQECREPALWSPRES*RVPPAPQNSLRPGS
Trigger: CGATCCTGGTCGAAGAGAGTTCTGGGGAGCTGGAGGTACCCGGCAGCTCTCCCGAGGGGACCAGAGAGCTGGCTCCCTGCATTCTTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS GCA 90 bp CTGCCCCGGGAACATAAAGCAGGCCTTTCACTGAGGAGTTCTGGCTaGTTCGGTTGGTTCTTGGCACCCAGCAAGGCGGCGTCGGGAGGG +
Preference number: 5 (lower is better)
Translates to: LPREHKAGLSLRSSG*FGWFLAPSKAASGG
Trigger: CCCTCCCGACGCCGCCTTGCTGGGTGCCAAGAACCAACCGAAGCAGCCAGAACTCCTCAGTGAAAGGCCTGCTTTATGTTCCCGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373374.7
CDS TCA 90 bp GTTCTTCTCGGCTGGACATGTAGGTTTCTTGGGCGGCAGGGTCAGTaGTGCGGTGCCCACTGCGTCACAGCAACCCTCCTCACCACAGGC +
Preference number: 5 (lower is better)
Translates to: VLLGWTCRFLGRQGQ*CGAHCVTATLLTTG
Trigger: GCCTGTGGTGAGGAGGGTTGCTGTGACGCAGTGGGCACCGCATCACTGACCCTGCCGCCCAAGAAACCTACATGTCCAGCCGAGAAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CCA 90 bp AGCTTAGGAACAGTGGAATGCTGCGGAGCTCAGGAACCAGGCGCCTaGGCGGGCAGAATGACATCTGGGAACAGCTGGAAGGGGAGGGCT +
Preference number: 5 (lower is better)
Translates to: SLGTVECCGAQEPGA*AGRMTSGNSWKGRA
Trigger: AGCCCTCCCCTTCCAGCTGTTCCCAGATGTCATTCTGCCCGCCCAGGCGCCTGGTTCCTGAGCTCCGCAGCATTCCACTGTTCCTAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS CCA 90 bp GAACATAAAGCAGGCCTTTCACTGAGGAGTTCTGGCTGCTTCGGTTaGTTCTTGGCACCCAGCAAGGCGGCGTCGGGAGGGGCGGGCATA +
Preference number: 5 (lower is better)
Translates to: EHKAGLSLRSSGCFG*FLAPSKAASGGAGI
Trigger: TATGCCCGCCCCTCCCGACGCCGCCTTGCTGGGTGCCAAGAACCAACCGAAGCAGCCAGAACTCCTCAGTGAAAGGCCTGCTTTATGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373374.7
CDS TCA 90 bp AAGCCCCCTCCTCACTGCCCCGGGAACATAAAGCAGGCCTTTCACTaGGGAGTTCTGGCTGCTTCGGTTGGTTCTTGGCACCCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: KPPPHCPGNIKQAFH*GVLAASVGSWHPAR
Trigger: CCTTGCTGGGTGCCAAGAACCAACCGAAGCAGCCAGAACTCCTCAGTGAAAGGCCTGCTTTATGTTCCCGGGGCAGTGAGGAGGGGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373374.7
CDS GCA 90 bp GAATCACAGTCCTGCCTGCTGCTGATAACGGGCATGGCCACCTTCTaGTTCAGAAGCTTGTCTCCGACAATGATGGAGGCTCTGGGGCGC +
Preference number: 5 (lower is better)
Translates to: ESQSCLLLITGMATF*FRSLSPTMMEALGR
Trigger: GCGCCCCAGAGCCTCCATCATTGTCGGAGACAAGCTTCTGAAGCAGAAGGTGGCCATGCCCGTTATCAGCAGCAGGCAGGACTGTGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS GCA 90 bp GTCTCAGTGGACTTCAGTGGGAACTGGGACAGAAGCTTGCTGACTTaGAAGTTGGAGTCACCTAGGATGCGGCCCCTGTCCTCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: VSVDFSGNWDRSLLT*KLESPRMRPLSSVP
Trigger: GGGGACAGAGGACAGGGGCCGCATCCTAGGTGACTCCAACTTGCAAGTCAGCAAGCTTCTGTCCCAGTTCCCACTGAAGTCCACTGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CCA 90 bp GGTACTGCGGTCCATCTCCTGCCATTAGGGGAGGGTCTCGGGGGTTaGCAGACATCTTTGGAGGTGTCCTCTGAGGGTAGGGATAATTGG +
Preference number: 5 (lower is better)
Translates to: GTAVHLLPLGEGLGG*QTSLEVSSEGRDNW
Trigger: CCAATTATCCCTACCCTCAGAGGACACCTCCAAAGATGTCTGCCAACCCCCGAGACCCTCCCCTAATGGCAGGAGATGGACCGCAGTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCGGGCATACAAGCGTGTaGGGGGTGGGGACCAGGCCC +
Preference number: 5 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGGHTSV*GVGTRP
Trigger: GGGCCTGGTCCCCACCCCCAACACGCTTGTATGCCC...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373374.7
CDS GCA 90 bp CCGGGTACCTCCAGCTCCCCAGAACTCTCTTCGACCAGGATCGAGTaGTCTTTGGTGAGGCTTAGGAACTCCTGTTCCACCAACAAGGAG +
Preference number: 5 (lower is better)
Translates to: PGTSSSPELSSTRIE*SLVRLRNSCSTNKE
Trigger: CTCCTTGTTGGTGGAACAGGAGTTCCTAAGCCTCACCAAAGAGCACTCGATCCTGGTCGAAGAGAGTTCTGGGGAGCTGGAGGTACCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CCA 90 bp GGCTCCATTCCATCAAGTGGTGCCTCTCCACAGCAGGGTCAGCCTTaGGCTTGGAACAGATCTTGGCAAACACTGGGAGCTGCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: GSIPSSGASPQQGQP*AWNRSWQTLGAASS
Trigger: AGAAGAGGCAGCTCCCAGTGTTTGCCAAGATCTGTTCCAAGCCCAAGGCTGACCCTGCTGTGGAGAGGCACCACTTGATGGAATGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CCA 90 bp CACCACCACCCCTCATTCACCAGAAAGGGAGATGAGGATGGGGCTTaGCAGAAGTGGGTCAGTTCTGTCTGGCTTTCGCTCCAGCAAGGT +
Preference number: 5 (lower is better)
Translates to: HHHPSFTRKGDEDGA*QKWVSSVWLSLQQG
Trigger: ACCTTGCTGGAGCGAAAGCCAGACAGAACTGACCCACTTCTGCCAAGCCCCATCCTCATCTCCCTTTCTGGTGAATGAGGGGTGGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR CAA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAAGTCCCCTTGCTGCTCTaGACCTCGGCGGCACACAGA +
Preference number: 5 (lower is better)
Translates to: QKSEPLVLIQGLREEKGEVPLLL*TSAAHR
Trigger: TCTGTGTGCCGCCGAGGTCAAGAGCAGCAAGGGGAC...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAACTGTCCTCTGTCCCCTaGCTGCTCTTGACCTCGGCG +
Preference number: 5 (lower is better)
Translates to: QKSEPLVLIQGLREEKGELSSVP*LLLTSA
Trigger: CGCCGAGGTCAAGAGCAGCAAGGGGACAGAGGACAG...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS TCA 90 bp TGGATGTCTCAGTGGACTTCAGTGGGAACTGGGACAGAAGCTTGCTaGCTTGCAAGTTGGAGTCACCTAGGATGCGGCCCCTGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: WMSQWTSVGTGTEAC*LASWSHLGCGPCPL
Trigger: CAGAGGACAGGGGCCGCATCCTAGGTGACTCCAACTTGCAAGTCAGCAAGCTTCTGTCCCAGTTCCCACTGAAGTCCACTGAGACATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CCA 90 bp ATTCCATCAAGTGGTGCCTCTCCACAGCAGGGTCAGCCTTGGGCTTaGAACAGATCTTGGCAAACACTGGGAGCTGCCTCTTCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: IPSSGASPQQGQPWA*NRSWQTLGAASSEQ
Trigger: CTGCTCAGAAGAGGCAGCTCCCAGTGTTTGCCAAGATCTGTTCCAAGCCCAAGGCTGACCCTGCTGTGGAGAGGCACCACTTGATGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CCA 90 bp CCACTTCCACTTTGTTTCGAAGTCTCGGCTGCCCGCTTGGGTTCTTaGTGGCCCCAAGGAACTCATAGAGCAAGTTCTTCTCGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: PLPLCFEVSAARLGS*WPQGTHRASSSRLD
Trigger: GTCCAGCCGAGAAGAACTTGCTCTATGAGTTCCTTGGGGCCACCAAGAACCCAAGCGGGCAGCCGAGACTTCGAAACAAAGTGGAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CCA 90 bp CGGCCCATCCACTTCCACTTTGTTTCGAAGTCTCGGCTGCCCGCTTaGGTTCTTGGTGGCCCCAAGGAACTCATAGAGCAAGTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: RPIHFHFVSKSRLPA*VLGGPKELIEQVLL
Trigger: GAGAAGAACTTGCTCTATGAGTTCCTTGGGGCCACCAAGAACCCAAGCGGGCAGCCGAGACTTCGAAACAAAGTGGAAGTGGATGGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CCA 90 bp TTGGCAGAAGTGGGTCAGTTCTGTCTGGCTTTCGCTCCAGCAAGGTaGTTAGGTTCAGAGGCCTTCTATTTGTGTGGGAGGGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: LAEVGQFCLAFAPAR*LGSEAFYLCGRGGW
Trigger: CCACCCACCCCTCCCACACAAATAGAAGGCCTCTGAACCTAACCACCTTGCTGGAGCGAAAGCCAGACAGAACTGACCCACTTCTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR CAA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGGAGCTCAGGGAGCTaGTCAGGACGTGCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKGSSGS*SGRAGG
Trigger: TCCTCCTGCACGTCCTGACAAGCTCCCTGAGCTCCC...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CCA 90 bp CTTCCACTTTGTTTCGAAGTCTCGGCTGCCCGCTTGGGTTCTTGGTaGCCCCAAGGAACTCATAGAGCAAGTTCTTCTCGGCTGGACATG +
Preference number: 5 (lower is better)
Translates to: LPLCFEVSAARLGSW*PQGTHRASSSRLDM
Trigger: CATGTCCAGCCGAGAAGAACTTGCTCTATGAGTTCCTTGGGGCCACCAAGAACCCAAGCGGGCAGCCGAGACTTCGAAACAAAGTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCGGAGGGTCTCGGGGGTaGGCAGACATCTTTGGAGGT +
Preference number: 5 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGGGSRG*ADIFGG
Trigger: ACCTCCAAAGATGTCTGCCAACCCCCGAGACCCTCC...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAAAGGGCGCAGGGGCCCTaGGCCACCAGGGCCGAGGAT +
Preference number: 5 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKRAQGP*ATRAED
Trigger: ATCCTCGGCCCTGGTGGCCAAGGGCCCCTGCGCCCT...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS CCA 90 bp CAGGCCCTGATACTGCAAGAAGGTAGAGTGATTCGTGAACACTGGTaGAGGTGGATAGTTCAGGTTGAGCCAGAGTGGCTGGTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: QALILQEGRVIREHW*RWIVQVEPEWLVQG
Trigger: ACCCTGAACCAGCCACTCTGGCTCAACCTGAACTATCCACCTCCACCAGTGTTCACGAATCACTCTACCTTCTTGCAGTATCAGGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CCA 90 bp GGTTGGCAGACATCTTTGGAGGTGTCCTCTGAGGGTAGGGATAATTaGGCTGGACAAAAGGGATGTAGCTCAGCAGAGGGGTGTAGGAAG +
Preference number: 5 (lower is better)
Translates to: GWQTSLEVSSEGRDN*AGQKGCSSAEGCRK
Trigger: CTTCCTACACCCCTCTGCTGAGCTACATCCCTTTTGTCCAGCCCAATTATCCCTACCCTCAGAGGACACCTCCAAAGATGTCTGCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAAACAGCAGGGTCAGCCTaGGGCTTGGAACAGATCTTG +
Preference number: 5 (lower is better)
Translates to: QKSEPLVLIQGLREEKGETAGSA*GLEQIL
Trigger: CAAGATCTGTTCCAAGCCCAAGGCTGACCCTGCTGT...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGTCCCTTGACCCTTTTTaGGCTCCTTGGTGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKSLDPF*APWCQG
Trigger: GCCCTGGCACCAAGGAGCCAAAAAAGGGTCAAGGGA...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTGTCTCGGCTGCCCGCTaGGGTTCTTGGTGGCCCCAA +
Preference number: 5 (lower is better)
Translates to: EQASMNMRVMCVCVCVACVSAAR*GSWWPQ
Trigger: TTGGGGCCACCAAGAACCCAAGCGGGCAGCCGAGAC...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAAGGTTGGCAGACATCTTaGGAGGTGTCCTCTGAGGGT +
Preference number: 5 (lower is better)
Translates to: QKSEPLVLIQGLREEKGEGWQTS*EVSSEG
Trigger: ACCCTCAGAGGACACCTCCAAAGATGTCTGCCAACC...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGCCGAACCCATATCCTaGGGGAAAGAGGTACTGCGG +
Preference number: 5 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKAEPIS*GKEVLR
Trigger: CCGCAGTACCTCTTTCCCCAAGGATATGGGTTCGGC...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAACCTGGCACTGCCCCCTaGCGACGCCGCCGTGACAAC +
Preference number: 5 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKPGTAP*RRRRDN
Trigger: GTTGTCACGGCGGCGTCGCAAGGGGGCAGTGCCAGG...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS TCA 90 bp CCAGCTCCCCAGAACTCTCTTCGACCAGGATCGAGTGCTCTTTGGTaGGGCTTAGGAACTCCTGTTCCACCAACAAGGAGATCTCATCTT +
Preference number: 5 (lower is better)
Translates to: PAPQNSLRPGSSALW*GLGTPVPPTRRSHL
Trigger: AAGATGAGATCTCCTTGTTGGTGGAACAGGAGTTCCTAAGCCTCACCAAAGAGCACTCGATCCTGGTCGAAGAGAGTTCTGGGGAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CCA 90 bp GTACAGGCCCTGATACTGCAAGAAGGTAGAGTGATTCGTGAACACTaGTGGAGGTGGATAGTTCAGGTTGAGCCAGAGTGGCTGGTTCAG +
Preference number: 5 (lower is better)
Translates to: VQALILQEGRVIREH*WRWIVQVEPEWLVQ
Trigger: CTGAACCAGCCACTCTGGCTCAACCTGAACTATCCACCTCCACCAGTGTTCACGAATCACTCTACCTTCTTGCAGTATCAGGGCCTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAAAGGATCGAGTGCTCTTaGGTGAGGCTTAGGAACTCC +
Preference number: 5 (lower is better)
Translates to: QKSEPLVLIQGLREEKGERIECS*VRLRNS
Trigger: GGAGTTCCTAAGCCTCACCAAAGAGCACTCGATCCT...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTGTCCCCTTGCTGCTCTaGACCTCGGCGGCACACAGA +
Preference number: 5 (lower is better)
Translates to: EQASMNMRVMCVCVCVACVPLLL*TSAAHR
Trigger: TCTGTGTGCCGCCGAGGTCAAGAGCAGCAAGGGGAC...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCGGGCCACTGAACAGGTaGTCCTGTAGGAAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGGPLNR*SCRKSL
Trigger: CAAGGACTTCCTACAGGACAACCTGTTCAGTGGCCC...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGGCCACTGAACAGGTaGTCCTGTAGGAAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKGPLNR*SCRKSL
Trigger: CAAGGACTTCCTACAGGACAACCTGTTCAGTGGCCC...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCGGGTCAGCCTTGGGCTaGGAACAGATCTTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGGSALG*EQILAN
Trigger: GTTTGCCAAGATCTGTTCCAAGCCCAAGGCTGACCC...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCGGACATGTAGGTTTCTaGGGCGGCAGGGTCAGTGAT +
Preference number: 5 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGGHVGF*GGRVSD
Trigger: ATCACTGACCCTGCCGCCCAAGAAACCTACATGTCC...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAACCTGTGTACTTCGGGTaGTTCTTGTCAGCAACCGTC +
Preference number: 5 (lower is better)
Translates to: QKSEPLVLIQGLREEKGEPVYFG*FLSATV
Trigger: GACGGTTGCTGACAAGAACAACCCGAAGTACACAGG...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAAGTATGGCATCACCTGTaGGGAGTAACATCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: QKSEPLVLIQGLREEKGEVWHHL*GVTSQL
Trigger: CAGCTGGGATGTTACTCCCAACAGGTGATGCCATAC...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTGCGGCTCCCACCAATTaGCCTGCCAGTAGCTCCCAC +
Preference number: 5 (lower is better)
Translates to: EQASMNMRVMCVCVCVACAAPTN*PASSSH
Trigger: GTGGGAGCTACTGGCAGGCAAATTGGTGGGAGCCGC...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS TCA 90 bp AGGTGGATAGTTCAGGTTGAGCCAGAGTGGCTGGTTCAGGGTTGCTaGGGTCATGGCTGTAGGAAAGTGTGGAGTGAAAACATTCCCTGT +
Preference number: 5 (lower is better)
Translates to: RWIVQVEPEWLVQGC*GHGCRKVWSENIPC
Trigger: ACAGGGAATGTTTTCACTCCACACTTTCCTACAGCCATGACCTCAGCAACCCTGAACCAGCCACTCTGGCTCAACCTGAACTATCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CCA 90 bp TTGTTGTCAGGGACCTTGGATGTCTCAGTGGACTTCAGTGGGAACTaGGACAGAAGCTTGCTGACTTGCAAGTTGGAGTCACCTAGGATG +
Preference number: 5 (lower is better)
Translates to: LLSGTLDVSVDFSGN*DRSLLTCKLESPRM
Trigger: CATCCTAGGTGACTCCAACTTGCAAGTCAGCAAGCTTCTGTCCCAGTTCCCACTGAAGTCCACTGAGACATCCAAGGTCCCTGACAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CCA 90 bp CACATTCTTGTTGTCAGGGACCTTGGATGTCTCAGTGGACTTCAGTaGGAACTGGGACAGAAGCTTGCTGACTTGCAAGTTGGAGTCACC +
Preference number: 5 (lower is better)
Translates to: HILVVRDLGCLSGLQ*ELGQKLADLQVGVT
Trigger: GGTGACTCCAACTTGCAAGTCAGCAAGCTTCTGTCCCAGTTCCCACTGAAGTCCACTGAGACATCCAAGGTCCCTGACAACAAGAATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATGCTTCGGTTGGTTCTaGGCACCCAGCAAGGCGGCG +
Preference number: 5 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAECFGWF*APSKAA
Trigger: CGCCGCCTTGCTGGGTGCCAAGAACCAACCGAAGCA...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373374.7
CDS-3UTR CAA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCTTGCTGACTTGCAAGTaGGAGTCACCTAGGATGCGG +
Preference number: 5 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGLLTCK*ESPRMR
Trigger: CCGCATCCTAGGTGACTCCAACTTGCAAGTCAGCAA...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGTCCTGTAGGAAGTCCTaGGTGACCCTTGTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKSCRKS*VTLVLS
Trigger: GGACAAGACAAGGGTCACCAAGGACTTCCTACAGGA...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAAGGGAGCTCAGGGAGCTaGTCAGGACGTGCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAEGSSGS*SGRAGG
Trigger: TCCTCCTGCACGTCCTGACAAGCTCCCTGAGCTCCC...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAAGTCTCGGCTGCCCGCTaGGGTTCTTGGTGGCCCCAA +
Preference number: 5 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKVSAAR*GSWWPQ
Trigger: TTGGGGCCACCAAGAACCCAAGCGGGCAGCCGAGAC...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCCCATCCACTTCCACTTaGTTTCGAAGTCTCGGCTGC +
Preference number: 5 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGPSTST*FRSLGC
Trigger: GCAGCCGAGACTTCGAAACAAAGTGGAAGTGGATGG...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCGTATGGCATCACCTGTaGGGAGTAACATCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGVWHHL*GVTSQL
Trigger: CAGCTGGGATGTTACTCCCAACAGGTGATGCCATAC...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAATTCTGCTTCAGAAGCTaGTCTCCGACAATGATGGAG +
Preference number: 5 (lower is better)
Translates to: QKSEPLVLIQGLREEKGEFCFRS*SPTMME
Trigger: CTCCATCATTGTCGGAGACAAGCTTCTGAAGCAGAA...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAACTGTCCTCTGTCCCCTaGCTGCTCTTGACCTCGGCG +
Preference number: 5 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKLSSVP*LLLTSA
Trigger: CGCCGAGGTCAAGAGCAGCAAGGGGACAGAGGACAG...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGTTGTTGTCAGGGACCTaGGATGTCTCAGTGGACTTC +
Preference number: 5 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKLLSGT*DVSVDF
Trigger: GAAGTCCACTGAGACATCCAAGGTCCCTGACAACAA...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGTCCAGCACATTCTTGTaGTCAGGGACCTTGGATGTC +
Preference number: 5 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKSSTFL*SGTLDV
Trigger: GACATCCAAGGTCCCTGACAACAAGAATGTGCTGGA...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTTCCCTTGACCCTTTTTaGGCTCCTTGGTGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: EQASMNMRVMCVCVCVACSLDPF*APWCQG
Trigger: GCCCTGGCACCAAGGAGCCAAAAAAGGGTCAAGGGA...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATGCCCGCTTGGGTTCTaGGTGGCCCCAAGGAACTCA +
Preference number: 5 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAECPLGF*VAPRNS
Trigger: TGAGTTCCTTGGGGCCACCAAGAACCCAAGCGGGCA...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCTTGTCCAGCACATTCTaGTTGTCAGGGACCTTGGAT +
Preference number: 5 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGLSSTF*LSGTLD
Trigger: ATCCAAGGTCCCTGACAACAAGAATGTGCTGGACAA...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGTTGGTGACCCTTGTCTaGTCCAGCACATTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKLVTLV*SSTFLL
Trigger: CAACAAGAATGTGCTGGACAAGACAAGGGTCACCAA...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCTTGGTGACCCTTGTCTaGTCCAGCACATTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGLVTLV*SSTFLL
Trigger: CAACAAGAATGTGCTGGACAAGACAAGGGTCACCAA...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAATGCCCGCTTGGGTTCTaGGTGGCCCCAAGGAACTCA +
Preference number: 5 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKCPLGF*VAPRNS
Trigger: TGAGTTCCTTGGGGCCACCAAGAACCCAAGCGGGCA...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTCCCATCTGCTGTGGGTaGTATGGCATCACCTGTTGG +
Preference number: 5 (lower is better)
Translates to: EQASMNMRVMCVCVCVACPICCG*YGITCW
Trigger: CCAACAGGTGATGCCATACAACCCACAGCAGATGGG...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTGGTTGGCAGACATCTTaGGAGGTGTCCTCTGAGGGT +
Preference number: 5 (lower is better)
Translates to: EQASMNMRVMCVCVCVACGWQTS*EVSSEG
Trigger: ACCCTCAGAGGACACCTCCAAAGATGTCTGCCAACC...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAAGGAGGGTCTCGGGGGTaGGCAGACATCTTTGGAGGT +
Preference number: 5 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKGGSRG*ADIFGG
Trigger: ACCTCCAAAGATGTCTGCCAACCCCCGAGACCCTCC...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp CAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGGGAGAAGACCTGGTCAGAACCTaGCTTTTCCAAACTTCATAC +
Preference number: 5 (lower is better)
Translates to: QKSEPLVLIQGLREEKGEDLVRT*LFQTSY
Trigger: GTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTC...TTCTCCCTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp AGAATCCAAAAATCAGAGCCCCTAGTCCTGATCCAAGGGCTAAGGGAGGAGAAGATTTCATGGCAAGTCTaGTCTAGGCTGTCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: RIQKSEPLVLIQGLREEKISWQV*SRLSWG
Trigger: ACCCCAAGACAGCCTAGACAAGACTTGCCATGAAAT...CTTCTCCTCCCTTAGCCCTTGGATCAGGACTAGGGGCTCTGATTTTTGGATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR CAA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATTCTGGCTGCTTCGGTaGGTTCTTGGCACCCAGCAA +
Preference number: 5 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAEFWLLR*VLGTQQ
Trigger: TTGCTGGGTGCCAAGAACCAACCGAAGCAGCCAGAA...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373374.7
CDS-3UTR CAA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTAGGATCGAGTGCTCTTaGGTGAGGCTTAGGAACTCC +
Preference number: 5 (lower is better)
Translates to: EQASMNMRVMCVCVCVACRIECS*VRLRNS
Trigger: GGAGTTCCTAAGCCTCACCAAAGAGCACTCGATCCT...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAAGGCTTGGAACAGATCTaGGCAAACACTGGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAEGLEQI*ANTGSC
Trigger: GCAGCTCCCAGTGTTTGCCAAGATCTGTTCCAAGCC...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAAGGGTCAGCCTTGGGCTaGGAACAGATCTTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAEGSALG*EQILAN
Trigger: GTTTGCCAAGATCTGTTCCAAGCCCAAGGCTGACCC...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAAACAGCAGGGTCAGCCTaGGGCTTGGAACAGATCTTG +
Preference number: 5 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAETAGSA*GLEQIL
Trigger: CAAGATCTGTTCCAAGCCCAAGGCTGACCCTGCTGT...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAACCCATCTGCTGTGGGTaGTATGGCATCACCTGTTGG +
Preference number: 5 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAEPICCG*YGITCW
Trigger: CCAACAGGTGATGCCATACAACCCACAGCAGATGGG...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAAGCCGAACCCATATCCTaGGGGAAAGAGGTACTGCGG +
Preference number: 5 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKAEPIS*GKEVLR
Trigger: CCGCAGTACCTCTTTCCCCAAGGATATGGGTTCGGC...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp GTGTGTGTAGCTTGTGCCATGTGTGAGGAGGGCTATTTTTGTGTCAGTGTTGGCGACCTGGTCAGAACCTaGCTTTTCCAAACTTCATAC +
Preference number: 5 (lower is better)
Translates to: VCVACAMCEEGYFCVSVGDLVRT*LFQTSY
Trigger: GTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTC...GCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACACACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTGAGGACAGCTTTCTTTaGGGGAGGGGAGGGCTTATT +
Preference number: 5 (lower is better)
Translates to: EQASMNMRVMCVCVCVACEDSFL*GRGGLI
Trigger: AATAAGCCCTCCCCTCCCCAAAAGAAAGCTGTCCTC...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR CAA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAATCAGAGGCCTTCTATTaGTGTGGGAGGGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKSEAFY*CGRGGW
Trigger: CCACCCACCCCTCCCACACAAATAGAAGGCCTCTGA...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS-3UTR CAA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATTGCTGACTTGCAAGTaGGAGTCACCTAGGATGCGG +
Preference number: 5 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAELLTCK*ESPRMR
Trigger: CCGCATCCTAGGTGACTCCAACTTGCAAGTCAGCAA...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp GAGCAAGCAAGTATGAATATGAGGGTCATGTGTGTGTGTGTGTGTGTAGCTTGTTCCAGCACATTCTTGTaGTCAGGGACCTTGGATGTC +
Preference number: 5 (lower is better)
Translates to: EQASMNMRVMCVCVCVACSSTFL*SGTLDV
Trigger: GACATCCAAGGTCCCTGACAACAAGAATGTGCTGGA...ACAAGCTACACACACACACACACACATGACCCTCATATTCATACTTGCTTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAAGGCTTGGAACAGATCTaGGCAAACACTGGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKGLEQI*ANTGSC
Trigger: GCAGCTCCCAGTGTTTGCCAAGATCTGTTCCAAGCC...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAACCTGTGTACTTCGGGTaGTTCTTGTCAGCAACCGTC +
Preference number: 5 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAEPVYFG*FLSATV
Trigger: GACGGTTGCTGACAAGAACAACCCGAAGTACACAGG...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAAAACTGGGACAGAAGCTaGCTGACTTGCAAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAENWDRS*LTCKLE
Trigger: CTCCAACTTGCAAGTCAGCAAGCTTCTGTCCCAGTT...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATTGTTGTCAGGGACCTaGGATGTCTCAGTGGACTTC +
Preference number: 5 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAELLSGT*DVSVDF
Trigger: GAAGTCCACTGAGACATCCAAGGTCCCTGACAACAA...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAATCCTGTAGGAAGTCCTaGGTGACCCTTGTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKSCRKS*VTLVLS
Trigger: GGACAAGACAAGGGTCACCAAGGACTTCCTACAGGA...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAACCATCCACTTCCACTTaGTTTCGAAGTCTCGGCTGC +
Preference number: 5 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKPSTST*FRSLGC
Trigger: GCAGCCGAGACTTCGAAACAAAGTGGAAGTGGATGG...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATACTTCGGGTTGTTCTaGTCAGCAACCGTCACAGGT +
Preference number: 5 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAEYFGLF*SATVTG
Trigger: ACCTGTGACGGTTGCTGACAAGAACAACCCGAAGTA...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAAAACTGGGACAGAAGCTaGCTGACTTGCAAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKNWDRS*LTCKLE
Trigger: CTCCAACTTGCAAGTCAGCAAGCTTCTGTCCCAGTT...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATTGTCCAGCACATTCTaGTTGTCAGGGACCTTGGAT +
Preference number: 5 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAELSSTF*LSGTLD
Trigger: ATCCAAGGTCCCTGACAACAAGAATGTGCTGGACAA...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAATACTTCGGGTTGTTCTaGTCAGCAACCGTCACAGGT +
Preference number: 5 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKYFGLF*SATVTG
Trigger: ACCTGTGACGGTTGCTGACAAGAACAACCCGAAGTA...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp TGTGACCTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCTGGTCTTGCTGTTTaGTCTGTGACCTGGTCAGAA +
Preference number: 5 (lower is better)
Translates to: CDLVRTLLFQTSYQAFAESGLAV*SVTWSE
Trigger: TTCTGACCAGGTCACAGACAAAACAGCAAGACCAGA...TTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAGGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS-3UTR CAA 90 bp CTGGTCAGAACCTTGCTTTTCCAAACTTCATACCAAGCTTTTGCAGAATCCAAATTCTGCTTCAGAAGCTaGTCTCCGACAATGATGGAG +
Preference number: 5 (lower is better)
Translates to: LVRTLLFQTSYQAFAESKFCFRS*SPTMME
Trigger: CTCCATCATTGTCGGAGACAAGCTTCTGAAGCAGAA...TTTGGATTCTGCAAAAGCTTGGTATGAAGTTTGGAAAAGCAAGGTTCTGACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS TCA 72 bp GGGCACCGGGAAGGGCCCAGCGGCTCAAGAGCGCGCTaGCTCGGCAAGGCAGGCTGGGCCGGGCGGCTCCCA +
Preference number: 6 (lower is better)
Translates to: GHREGPSGSRAR*LGKAGWAGRLP
Trigger: TGGGAGCCGCCCGGCCCAGCCTGCCTTGCCGAGTCAGCGCGCTCTTGAGCCGCTGGGCCCTTCCCGGTGCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS CAA 90 bp GCGCTGACTCGGCAAGGCAGGCTGGGCCGGGCGGCTCCCACCAATTaGCCTGCCAGTAGCTCCCACACCCTCGCCGTCGTCGAGCGGGGG +
Preference number: 6 (lower is better)
Translates to: ALTRQGRLGRAAPTN*PASSSHTLAVVERG
Trigger: CCCCCGCTCGACGACGGCGAGGGTGTGGGAGCTACTGGCAGGCAAATTGGTGGGAGCCGCCCGGCCCAGCCTGCCTTGCCGAGTCAGCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS GCA 72 bp GGCAAGGCAGGCTGGGCCGGGCGGCTCCCACCAATTTaGCTGCCAGTAGCTCCCACACCCTCGCCGTCGTCG +
Preference number: 6 (lower is better)
Translates to: GKAGWAGRLPPI*LPVAPTPSPSS
Trigger: CGACGACGGCGAGGGTGTGGGAGCTACTGGCAGGCAAATTGGTGGGAGCCGCCCGGCCCAGCCTGCCTTGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS CAA 72 bp CGGCAAGGCAGGCTGGGCCGGGCGGCTCCCACCAATTaGCCTGCCAGTAGCTCCCACACCCTCGCCGTCGTC +
Preference number: 6 (lower is better)
Translates to: RQGRLGRAAPTN*PASSSHTLAVV
Trigger: GACGACGGCGAGGGTGTGGGAGCTACTGGCAGGCAAATTGGTGGGAGCCGCCCGGCCCAGCCTGCCTTGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS TCA 72 bp CACAGTCCCTGGCACTGCCCCCTTGCGACGCCGCCGTaGCAACTTTCGGCGCCTGGGCTCAGCCCATGCTGT +
Preference number: 6 (lower is better)
Translates to: HSPWHCPLATPP*QLSAPGLSPCC
Trigger: ACAGCATGGGCTGAGCCCAGGCGCCGAAAGTTGTCACGGCGGCGTCGCAAGGGGGCAGTGCCAGGGACTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS GCA 72 bp CCTACCCCTCCTGCTCCCGGTCTCCCGCTGCTGCTCTaGTGCCCCCGGAAAGAAGGGATGAGGCGTGTGTGG +
Preference number: 6 (lower is better)
Translates to: PTPPAPGLPLLL*CPRKEGMRRVW
Trigger: CCACACACGCCTCATCCCTTCTTTCCGGGGGCAGCAGAGCAGCAGCGGGAGACCGGGAGCAGGAGGGGTAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS CCA 72 bp GGGTGTGTCCTGGTGGATCCAGATGTATCTGGGGAATaGGCCCAGGGCGCAGGGGCCCTTGGCCACCAGGGC +
Preference number: 6 (lower is better)
Translates to: GCVLVDPDVSGE*AQGAGALGHQG
Trigger: GCCCTGGTGGCCAAGGGCCCCTGCGCCCTGGGCCCATTCCCCAGATACATCTGGATCCACCAGGACACACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS CCA 72 bp TGTATCTGGGGAATGGGCCCAGGGCGCAGGGGCCCTTaGCCACCAGGGCCGAGGATGAAGGAAGCCCATTCC +
Preference number: 6 (lower is better)
Translates to: CIWGMGPGRRGP*PPGPRMKEAHS
Trigger: GGAATGGGCTTCCTTCATCCTCGGCCCTGGTGGCCAAGGGCCCCTGCGCCCTGGGCCCATTCCCCAGATACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS GCA 72 bp TGCAGGGAGCCAGCTCTCTGGTCCCCTCGGGAGAGCTaGCGGGTACCTCCAGCTCCCCAGAACTCTCTTCGA +
Preference number: 6 (lower is better)
Translates to: CREPALWSPRES*RVPPAPQNSLR
Trigger: TCGAAGAGAGTTCTGGGGAGCTGGAGGTACCCGGCAGCTCTCCCGAGGGGACCAGAGAGCTGGCTCCCTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CCA 72 bp GCAGGCCTTTCACTGAGGAGTTCTGGCTGCTTCGGTTaGTTCTTGGCACCCAGCAAGGCGGCGTCGGGAGGG +
Preference number: 6 (lower is better)
Translates to: AGLSLRSSGCFG*FLAPSKAASGG
Trigger: CCCTCCCGACGCCGCCTTGCTGGGTGCCAAGAACCAACCGAAGCAGCCAGAACTCCTCAGTGAAAGGCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373374.7
CDS TCA 72 bp GGCTGGACATGTAGGTTTCTTGGGCGGCAGGGTCAGTaGTGCGGTGCCCACTGCGTCACAGCAACCCTCCTC +
Preference number: 6 (lower is better)
Translates to: GWTCRFLGRQGQ*CGAHCVTATLL
Trigger: GAGGAGGGTTGCTGTGACGCAGTGGGCACCGCATCACTGACCCTGCCGCCCAAGAAACCTACATGTCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CAA 72 bp AGCAGGCCTTTCACTGAGGAGTTCTGGCTGCTTCGGTaGGTTCTTGGCACCCAGCAAGGCGGCGTCGGGAGG +
Preference number: 6 (lower is better)
Translates to: SRPFTEEFWLLR*VLGTQQGGVGR
Trigger: CCTCCCGACGCCGCCTTGCTGGGTGCCAAGAACCAACCGAAGCAGCCAGAACTCCTCAGTGAAAGGCCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373374.7
CDS CCA 72 bp ACAGTGGAATGCTGCGGAGCTCAGGAACCAGGCGCCTaGGCGGGCAGAATGACATCTGGGAACAGCTGGAAG +
Preference number: 6 (lower is better)
Translates to: TVECCGAQEPGA*AGRMTSGNSWK
Trigger: CTTCCAGCTGTTCCCAGATGTCATTCTGCCCGCCCAGGCGCCTGGTTCCTGAGCTCCGCAGCATTCCACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS GCA 72 bp GTCGAGCCGAACCCATATCCTTGGGGAAAGAGGTACTaGGGTCCATCTCCTGCCATTAGGGGAGGGTCTCGG +
Preference number: 6 (lower is better)
Translates to: VEPNPYPWGKRY*GPSPAIRGGSR
Trigger: CCGAGACCCTCCCCTAATGGCAGGAGATGGACCGCAGTACCTCTTTCCCCAAGGATATGGGTTCGGCTCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CCA 72 bp GTCCATCTCCTGCCATTAGGGGAGGGTCTCGGGGGTTaGCAGACATCTTTGGAGGTGTCCTCTGAGGGTAGG +
Preference number: 6 (lower is better)
Translates to: VHLLPLGEGLGG*QTSLEVSSEGR
Trigger: CCTACCCTCAGAGGACACCTCCAAAGATGTCTGCCAACCCCCGAGACCCTCCCCTAATGGCAGGAGATGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CAA 90 bp GTGGACTTCAGTGGGAACTGGGACAGAAGCTTGCTGACTTGCAAGTaGGAGTCACCTAGGATGCGGCCCCTGTCCTCTGTCCCCTTGCTG +
Preference number: 6 (lower is better)
Translates to: VDFSGNWDRSLLTCK*ESPRMRPLSSVPLL
Trigger: CAGCAAGGGGACAGAGGACAGGGGCCGCATCCTAGGTGACTCCAACTTGCAAGTCAGCAAGCTTCTGTCCCAGTTCCCACTGAAGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CAA 90 bp GGGCTCCATTCCATCAAGTGGTGCCTCTCCACAGCAGGGTCAGCCTaGGGCTTGGAACAGATCTTGGCAAACACTGGGAGCTGCCTCTTC +
Preference number: 6 (lower is better)
Translates to: GLHSIKWCLSTAGSA*GLEQILANTGSCLF
Trigger: GAAGAGGCAGCTCCCAGTGTTTGCCAAGATCTGTTCCAAGCCCAAGGCTGACCCTGCTGTGGAGAGGCACCACTTGATGGAATGGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS GCA 72 bp GGCCCATCCACTTCCACTTTGTTTCGAAGTCTCGGCTaGCCGCTTGGGTTCTTGGTGGCCCCAAGGAACTCA +
Preference number: 6 (lower is better)
Translates to: GPSTSTLFRSLG*PLGFLVAPRNS
Trigger: TGAGTTCCTTGGGGCCACCAAGAACCCAAGCGGGCAGCCGAGACTTCGAAACAAAGTGGAAGTGGATGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CAA 72 bp AAGTGGTGCCTCTCCACAGCAGGGTCAGCCTTGGGCTaGGAACAGATCTTGGCAAACACTGGGAGCTGCCTC +
Preference number: 6 (lower is better)
Translates to: KWCLSTAGSALG*EQILANTGSCL
Trigger: GAGGCAGCTCCCAGTGTTTGCCAAGATCTGTTCCAAGCCCAAGGCTGACCCTGCTGTGGAGAGGCACCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CAA 90 bp TGCCTGCTGCTGATAACGGGCATGGCCACCTTCTGCTTCAGAAGCTaGTCTCCGACAATGATGGAGGCTCTGGGGCGCTCATTACTGCCT +
Preference number: 6 (lower is better)
Translates to: CLLLITGMATFCFRS*SPTMMEALGRSLLP
Trigger: AGGCAGTAATGAGCGCCCCAGAGCCTCCATCATTGTCGGAGACAAGCTTCTGAAGCAGAAGGTGGCCATGCCCGTTATCAGCAGCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CAA 90 bp GTCACAGGTGCGTTAAATTTCAGCTCCGGCCCATCCACTTCCACTTaGTTTCGAAGTCTCGGCTGCCCGCTTGGGTTCTTGGTGGCCCCA +
Preference number: 6 (lower is better)
Translates to: VTGALNFSSGPSTST*FRSLGCPLGFLVAP
Trigger: TGGGGCCACCAAGAACCCAAGCGGGCAGCCGAGACTTCGAAACAAAGTGGAAGTGGATGGGCCGGAGCTGAAATTTAACGCACCTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS TCA 72 bp TGGCCACCTTCTGCTTCAGAAGCTTGTCTCCGACAATaGTGGAGGCTCTGGGGCGCTCATTACTGCCTGCCA +
Preference number: 6 (lower is better)
Translates to: WPPSASEACLRQ*WRLWGAHYCLP
Trigger: TGGCAGGCAGTAATGAGCGCCCCAGAGCCTCCATCATTGTCGGAGACAAGCTTCTGAAGCAGAAGGTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS GCA 72 bp GAACATAAAGCAGGCCTTTCACTGAGGAGTTCTGGCTaGTTCGGTTGGTTCTTGGCACCCAGCAAGGCGGCG +
Preference number: 6 (lower is better)
Translates to: EHKAGLSLRSSG*FGWFLAPSKAA
Trigger: CGCCGCCTTGCTGGGTGCCAAGAACCAACCGAAGCAGCCAGAACTCCTCAGTGAAAGGCCTGCTTTATGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373374.7
CDS GCA 72 bp GACTTCAGTGGGAACTGGGACAGAAGCTTGCTGACTTaGAAGTTGGAGTCACCTAGGATGCGGCCCCTGTCC +
Preference number: 6 (lower is better)
Translates to: DFSGNWDRSLLT*KLESPRMRPLS
Trigger: GGACAGGGGCCGCATCCTAGGTGACTCCAACTTGCAAGTCAGCAAGCTTCTGTCCCAGTTCCCACTGAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS GCA 72 bp AAGTCAACAAAAACCAGTAGCTTAGGAACAGTGGAATaGTGCGGAGCTCAGGAACCAGGCGCCTGGGCGGGC +
Preference number: 6 (lower is better)
Translates to: KSTKTSSLGTVE*CGAQEPGAWAG
Trigger: GCCCGCCCAGGCGCCTGGTTCCTGAGCTCCGCAGCATTCCACTGTTCCTAAGCTACTGGTTTTTGTTGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS CCA 72 bp CCATCAAGTGGTGCCTCTCCACAGCAGGGTCAGCCTTaGGCTTGGAACAGATCTTGGCAAACACTGGGAGCT +
Preference number: 6 (lower is better)
Translates to: PSSGASPQQGQP*AWNRSWQTLGA
Trigger: AGCTCCCAGTGTTTGCCAAGATCTGTTCCAAGCCCAAGGCTGACCCTGCTGTGGAGAGGCACCACTTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CAA 72 bp AGTGGGAACTGGGACAGAAGCTTGCTGACTTGCAAGTaGGAGTCACCTAGGATGCGGCCCCTGTCCTCTGTC +
Preference number: 6 (lower is better)
Translates to: SGNWDRSLLTCK*ESPRMRPLSSV
Trigger: GACAGAGGACAGGGGCCGCATCCTAGGTGACTCCAACTTGCAAGTCAGCAAGCTTCTGTCCCAGTTCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CAA 72 bp TCCATCAAGTGGTGCCTCTCCACAGCAGGGTCAGCCTaGGGCTTGGAACAGATCTTGGCAAACACTGGGAGC +
Preference number: 6 (lower is better)
Translates to: SIKWCLSTAGSA*GLEQILANTGS
Trigger: GCTCCCAGTGTTTGCCAAGATCTGTTCCAAGCCCAAGGCTGACCCTGCTGTGGAGAGGCACCACTTGATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CAA 90 bp ACCTTGGATGTCTCAGTGGACTTCAGTGGGAACTGGGACAGAAGCTaGCTGACTTGCAAGTTGGAGTCACCTAGGATGCGGCCCCTGTCC +
Preference number: 6 (lower is better)
Translates to: TLDVSVDFSGNWDRS*LTCKLESPRMRPLS
Trigger: GGACAGGGGCCGCATCCTAGGTGACTCCAACTTGCAAGTCAGCAAGCTTCTGTCCCAGTTCCCACTGAAGTCCACTGAGACATCCAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CAA 90 bp CCGGCCCATCCACTTCCACTTTGTTTCGAAGTCTCGGCTGCCCGCTaGGGTTCTTGGTGGCCCCAAGGAACTCATAGAGCAAGTTCTTCT +
Preference number: 6 (lower is better)
Translates to: PAHPLPLCFEVSAAR*GSWWPQGTHRASSS
Trigger: AGAAGAACTTGCTCTATGAGTTCCTTGGGGCCACCAAGAACCCAAGCGGGCAGCCGAGACTTCGAAACAAAGTGGAAGTGGATGGGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS TCA 72 bp CAACCACCACCACCCCTCATTCACCAGAAAGGGAGATaGGGATGGGGCTTGGCAGAAGTGGGTCAGTTCTGT +
Preference number: 6 (lower is better)
Translates to: QPPPPLIHQKGR*GWGLAEVGQFC
Trigger: ACAGAACTGACCCACTTCTGCCAAGCCCCATCCTCATCTCCCTTTCTGGTGAATGAGGGGTGGTGGTGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488417.2
CDS GCA 72 bp TCCAGCTCCCCAGAACTCTCTTCGACCAGGATCGAGTaGTCTTTGGTGAGGCTTAGGAACTCCTGTTCCACC +
Preference number: 6 (lower is better)
Translates to: SSSPELSSTRIE*SLVRLRNSCST
Trigger: GGTGGAACAGGAGTTCCTAAGCCTCACCAAAGAGCACTCGATCCTGGTCGAAGAGAGTTCTGGGGAGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS GCA 72 bp TCCTGCCTGCTGCTGATAACGGGCATGGCCACCTTCTaGTTCAGAAGCTTGTCTCCGACAATGATGGAGGCT +
Preference number: 6 (lower is better)
Translates to: SCLLLITGMATF*FRSLSPTMMEA
Trigger: AGCCTCCATCATTGTCGGAGACAAGCTTCTGAAGCAGAAGGTGGCCATGCCCGTTATCAGCAGCAGGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CCA 72 bp TGTTTCGAAGTCTCGGCTGCCCGCTTGGGTTCTTGGTaGCCCCAAGGAACTCATAGAGCAAGTTCTTCTCGG +
Preference number: 6 (lower is better)
Translates to: CFEVSAARLGSW*PQGTHRASSSR
Trigger: CCGAGAAGAACTTGCTCTATGAGTTCCTTGGGGCCACCAAGAACCCAAGCGGGCAGCCGAGACTTCGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CAA 72 bp CCACTTCCACTTTGTTTCGAAGTCTCGGCTGCCCGCTaGGGTTCTTGGTGGCCCCAAGGAACTCATAGAGCA +
Preference number: 6 (lower is better)
Translates to: PLPLCFEVSAAR*GSWWPQGTHRA
Trigger: TGCTCTATGAGTTCCTTGGGGCCACCAAGAACCCAAGCGGGCAGCCGAGACTTCGAAACAAAGTGGAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS TCA 72 bp GTTCCACCAACAAGGAGATCTCATCTTTGCCACTGCTaGGCTCCAGAGCTTGCTGGCGTAGTCAGTCCCTTC +
Preference number: 6 (lower is better)
Translates to: VPPTRRSHLCHC*APELAGVVSPF
Trigger: GAAGGGACTGACTACGCCAGCAAGCTCTGGAGCTCAGCAGTGGCAAAGATGAGATCTCCTTGTTGGTGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373374.7
CDS CCA 72 bp CACTTCCACTTTGTTTCGAAGTCTCGGCTGCCCGCTTaGGTTCTTGGTGGCCCCAAGGAACTCATAGAGCAA +
Preference number: 6 (lower is better)
Translates to: HFHFVSKSRLPA*VLGGPKELIEQ
Trigger: TTGCTCTATGAGTTCCTTGGGGCCACCAAGAACCCAAGCGGGCAGCCGAGACTTCGAAACAAAGTGGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CAA 72 bp GCGTTAAATTTCAGCTCCGGCCCATCCACTTCCACTTaGTTTCGAAGTCTCGGCTGCCCGCTTGGGTTCTTG +
Preference number: 6 (lower is better)
Translates to: ALNFSSGPSTST*FRSLGCPLGFL
Trigger: CAAGAACCCAAGCGGGCAGCCGAGACTTCGAAACAAAGTGGAAGTGGATGGGCCGGAGCTGAAATTTAACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CAA 90 bp ACCTCCAGCTCCCCAGAACTCTCTTCGACCAGGATCGAGTGCTCTTaGGTGAGGCTTAGGAACTCCTGTTCCACCAACAAGGAGATCTCA +
Preference number: 6 (lower is better)
Translates to: TSSSPELSSTRIECS*VRLRNSCSTNKEIS
Trigger: TGAGATCTCCTTGTTGGTGGAACAGGAGTTCCTAAGCCTCACCAAAGAGCACTCGATCCTGGTCGAAGAGAGTTCTGGGGAGCTGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CCA 72 bp CTTTGTTTCGAAGTCTCGGCTGCCCGCTTGGGTTCTTaGTGGCCCCAAGGAACTCATAGAGCAAGTTCTTCT +
Preference number: 6 (lower is better)
Translates to: LCFEVSAARLGS*WPQGTHRASSS
Trigger: AGAAGAACTTGCTCTATGAGTTCCTTGGGGCCACCAAGAACCCAAGCGGGCAGCCGAGACTTCGAAACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CCA 72 bp ACATCTTTGGAGGTGTCCTCTGAGGGTAGGGATAATTaGGCTGGACAAAAGGGATGTAGCTCAGCAGAGGGG +
Preference number: 6 (lower is better)
Translates to: TSLEVSSEGRDN*AGQKGCSSAEG
Trigger: CCCCTCTGCTGAGCTACATCCCTTTTGTCCAGCCCAATTATCCCTACCCTCAGAGGACACCTCCAAAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CAA 72 bp TCCCCAGAACTCTCTTCGACCAGGATCGAGTGCTCTTaGGTGAGGCTTAGGAACTCCTGTTCCACCAACAAG +
Preference number: 6 (lower is better)
Translates to: SPELSSTRIECS*VRLRNSCSTNK
Trigger: CTTGTTGGTGGAACAGGAGTTCCTAAGCCTCACCAAAGAGCACTCGATCCTGGTCGAAGAGAGTTCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CAA 90 bp TTGGTGACCCTTGTCTTGTCCAGCACATTCTTGTTGTCAGGGACCTaGGATGTCTCAGTGGACTTCAGTGGGAACTGGGACAGAAGCTTG +
Preference number: 6 (lower is better)
Translates to: LVTLVLSSTFLLSGT*DVSVDFSGNWDRSL
Trigger: CAAGCTTCTGTCCCAGTTCCCACTGAAGTCCACTGAGACATCCAAGGTCCCTGACAACAAGAATGTGCTGGACAAGACAAGGGTCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CAA 90 bp TGTAGGAAGTCCTTGGTGACCCTTGTCTTGTCCAGCACATTCTTGTaGTCAGGGACCTTGGATGTCTCAGTGGACTTCAGTGGGAACTGG +
Preference number: 6 (lower is better)
Translates to: CRKSLVTLVLSSTFL*SGTLDVSVDFSGNW
Trigger: CCAGTTCCCACTGAAGTCCACTGAGACATCCAAGGTCCCTGACAACAAGAATGTGCTGGACAAGACAAGGGTCACCAAGGACTTCCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CAA 90 bp TCCTGTAGGAAGTCCTTGGTGACCCTTGTCTTGTCCAGCACATTCTaGTTGTCAGGGACCTTGGATGTCTCAGTGGACTTCAGTGGGAAC +
Preference number: 6 (lower is better)
Translates to: SCRKSLVTLVLSSTF*LSGTLDVSVDFSGN
Trigger: GTTCCCACTGAAGTCCACTGAGACATCCAAGGTCCCTGACAACAAGAATGTGCTGGACAAGACAAGGGTCACCAAGGACTTCCTACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CAA 90 bp CCACTGAACAGGTTGTCCTGTAGGAAGTCCTTGGTGACCCTTGTCTaGTCCAGCACATTCTTGTTGTCAGGGACCTTGGATGTCTCAGTG +
Preference number: 6 (lower is better)
Translates to: PLNRLSCRKSLVTLV*SSTFLLSGTLDVSV
Trigger: CACTGAGACATCCAAGGTCCCTGACAACAAGAATGTGCTGGACAAGACAAGGGTCACCAAGGACTTCCTACAGGACAACCTGTTCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CCA 72 bp GTTGTCAGGGACCTTGGATGTCTCAGTGGACTTCAGTaGGAACTGGGACAGAAGCTTGCTGACTTGCAAGTT +
Preference number: 6 (lower is better)
Translates to: VVRDLGCLSGLQ*ELGQKLADLQV
Trigger: AACTTGCAAGTCAGCAAGCTTCTGTCCCAGTTCCCACTGAAGTCCACTGAGACATCCAAGGTCCCTGACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CCA 72 bp CAAGAAGGTAGAGTGATTCGTGAACACTGGTGGAGGTaGATAGTTCAGGTTGAGCCAGAGTGGCTGGTTCAG +
Preference number: 6 (lower is better)
Translates to: QEGRVIREHWWR*IVQVEPEWLVQ
Trigger: CTGAACCAGCCACTCTGGCTCAACCTGAACTATCCACCTCCACCAGTGTTCACGAATCACTCTACCTTCTTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CAA 90 bp GGAAAGTGTGGAGTGAAAACATTCCCTGTGTACTTCGGGTTGTTCTaGTCAGCAACCGTCACAGGTGCGTTAAATTTCAGCTCCGGCCCA +
Preference number: 6 (lower is better)
Translates to: GKCGVKTFPVYFGLF*SATVTGALNFSSGP
Trigger: TGGGCCGGAGCTGAAATTTAACGCACCTGTGACGGTTGCTGACAAGAACAACCCGAAGTACACAGGGAATGTTTTCACTCCACACTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CCA 72 bp ATACTGCAAGAAGGTAGAGTGATTCGTGAACACTGGTaGAGGTGGATAGTTCAGGTTGAGCCAGAGTGGCTG +
Preference number: 6 (lower is better)
Translates to: ILQEGRVIREHW*RWIVQVEPEWL
Trigger: CAGCCACTCTGGCTCAACCTGAACTATCCACCTCCACCAGTGTTCACGAATCACTCTACCTTCTTGCAGTAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CAA 72 bp AAGTCCTTGGTGACCCTTGTCTTGTCCAGCACATTCTaGTTGTCAGGGACCTTGGATGTCTCAGTGGACTTC +
Preference number: 6 (lower is better)
Translates to: KSLVTLVLSSTF*LSGTLDVSVDF
Trigger: GAAGTCCACTGAGACATCCAAGGTCCCTGACAACAAGAATGTGCTGGACAAGACAAGGGTCACCAAGGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CAA 72 bp AGGTTGTCCTGTAGGAAGTCCTTGGTGACCCTTGTCTaGTCCAGCACATTCTTGTTGTCAGGGACCTTGGAT +
Preference number: 6 (lower is better)
Translates to: RLSCRKSLVTLV*SSTFLLSGTLD
Trigger: ATCCAAGGTCCCTGACAACAAGAATGTGCTGGACAAGACAAGGGTCACCAAGGACTTCCTACAGGACAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CAA 90 bp GCTGTAGGAAAGTGTGGAGTGAAAACATTCCCTGTGTACTTCGGGTaGTTCTTGTCAGCAACCGTCACAGGTGCGTTAAATTTCAGCTCC +
Preference number: 6 (lower is better)
Translates to: AVGKCGVKTFPVYFG*FLSATVTGALNFSS
Trigger: GGAGCTGAAATTTAACGCACCTGTGACGGTTGCTGACAAGAACAACCCGAAGTACACAGGGAATGTTTTCACTCCACACTTTCCTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CAA 72 bp GGAGTGAAAACATTCCCTGTGTACTTCGGGTTGTTCTaGTCAGCAACCGTCACAGGTGCGTTAAATTTCAGC +
Preference number: 6 (lower is better)
Translates to: GVKTFPVYFGLF*SATVTGALNFS
Trigger: GCTGAAATTTAACGCACCTGTGACGGTTGCTGACAAGAACAACCCGAAGTACACAGGGAATGTTTTCACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2
CDS CAA 72 bp AAGTGTGGAGTGAAAACATTCCCTGTGTACTTCGGGTaGTTCTTGTCAGCAACCGTCACAGGTGCGTTAAAT +
Preference number: 6 (lower is better)
Translates to: KCGVKTFPVYFG*FLSATVTGALN
Trigger: ATTTAACGCACCTGTGACGGTTGCTGACAAGAACAACCCGAAGTACACAGGGAATGTTTTCACTCCACACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373374.7
ENST00000488417.2