RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C1ORF74 (Homo sapiens)

Ensembl gene IDs: ENSG00000162757

Ensembl transcript IDs: ENST00000294811.2

Found 222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTTTCTTCTGTCTCCCTGTCCCCCTACAGAGGCAATGTGGGCGATaGCTCCCAGTGCTGATGGTGGTGATTGCTGCAGCACTGGCAGTG +
Preference number: 1 (lower is better)
Translates to: TFFCLPVPLQRQCGR*LPVLMVVIAAALAV
Trigger: CACTGCCAGTGCTGCAGCAATCACCACCATCAGCACTGGGAGCCATCGCCCACATTGCCTCTGTAGGGGGACAGGGAGACAGAAGAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR CCA 90 bp CATGGCCACTTTCTTCTGTCTCCCTGTCCCCCTACAGAGGCAATGTaGGCGATGGCTCCCAGTGCTGATGGTGGTGATTGCTGCAGCACT +
Preference number: 1 (lower is better)
Translates to: HGHFLLSPCPPTEAM*AMAPSADGGDCCST
Trigger: AGTGCTGCAGCAATCACCACCATCAGCACTGGGAGCCATCGCCCACATTGCCTCTGTAGGGGGACAGGGAGACAGAAGAAAGTGGCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR CCA 90 bp GGCAGCGGGATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTaGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTTTTAAGGACT +
Preference number: 1 (lower is better)
Translates to: GSGMDYMTSWSPSQF*ESVKSGMCGSFLRT
Trigger: AGTCCTTAAAAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR CCA 90 bp TTCTCTTACCTGCCTAGAGGCAGCGGGATGGACTACATGACCTCCTaGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCGGGATGTGT +
Preference number: 1 (lower is better)
Translates to: FSYLPRGSGMDYMTS*SPSQFWESVKSGMC
Trigger: ACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCGCTGCCTCTAGGCAGGTAAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR TCA 90 bp TATTGCTCTTCTCTTACCTGCCTAGAGGCAGCGGGATGGACTACATaGCCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTGTTAAGTCCG +
Preference number: 1 (lower is better)
Translates to: YCSSLTCLEAAGWTT*PPGVPASSGSLLSP
Trigger: CGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCGCTGCCTCTAGGCAGGTAAGAGAAGAGCAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR GCA 90 bp AAGCTTAGCAGGGGCCTACTGGAAGTTAACCTTTATGTCAGAGAATaGCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCC +
Preference number: 1 (lower is better)
Translates to: KLSRGLLEVNLYVRE*HQSSQEHALPSSLP
Trigger: GGGGAGGGAACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCATTCTCTGACATAAAGGTTAACTTCCAGTAGGCCCCTGCTAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR CCA 90 bp GGAGCTCAGATTCCAGCTGTCTGTCCAAGCTTAGCAGGGGCCTACTaGAAGTTAACCTTTATGTCAGAGAATGCCATCAGTCTAGCCAAG +
Preference number: 1 (lower is better)
Translates to: GAQIPAVCPSLAGAY*KLTFMSENAISLAK
Trigger: CTTGGCTAGACTGATGGCATTCTCTGACATAAAGGTTAACTTCCAGTAGGCCCCTGCTAAGCTTGGACAGACAGCTGGAATCTGAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR CCA 90 bp GTCCCTGATGGATACGGCTCCCTGGGCCAGAGAACATTGGTTAAGTaGTTTTATCCCAAGACAGGTGACAAAATGGGAGACAGAGTAAAA +
Preference number: 1 (lower is better)
Translates to: VPDGYGSLGQRTLVK*FYPKTGDKMGDRVK
Trigger: TTTTACTCTGTCTCCCATTTTGTCACCTGTCTTGGGATAAAACCACTTAACCAATGTTCTCTGGCCCAGGGAGCCGTATCCATCAGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR CCA 90 bp TATATCTGGTCCCTGATGGATACGGCTCCCTGGGCCAGAGAACATTaGTTAAGTGGTTTTATCCCAAGACAGGTGACAAAATGGGAGACA +
Preference number: 1 (lower is better)
Translates to: YIWSLMDTAPWAREH*LSGFIPRQVTKWET
Trigger: TGTCTCCCATTTTGTCACCTGTCTTGGGATAAAACCACTTAACCAATGTTCTCTGGCCCAGGGAGCCGTATCCATCAGGGACCAGATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR TCA 90 bp GCACCACCATTACCTATTTACATGCCCTTTGCATTTGTGGCCAACTaGTCTACAGCATTGTGCCTTAGTGTATTCAAGACACTTGGAATT +
Preference number: 1 (lower is better)
Translates to: APPLPIYMPFAFVAN*STALCLSVFKTLGI
Trigger: AATTCCAAGTGTCTTGAATACACTAAGGCACAATGCTGTAGATCAGTTGGCCACAAATGCAAAGGGCATGTAAATAGGTAATGGTGGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR TCA 90 bp AGAACTCTCAATGCCAGAAGGAAAGACTTACTCTTAGCTAAAGTATaGAAGGGTGTTCTTTTAGCCGATGATAAGCATGGTGGCAAGAAC +
Preference number: 1 (lower is better)
Translates to: RTLNARRKDLLLAKV*KGVLLADDKHGGKN
Trigger: GTTCTTGCCACCATGCTTATCATCGGCTAAAAGAACACCCTTTCATACTTTAGCTAAGAGTAAGTCTTTCCTTCTGGCATTGAGAGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CCA 90 bp TGCCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCCTCTCCCCACAGGCAATGTGGGCGATaGCTCCCAGTGCTGATGGTG +
Preference number: 2 (lower is better)
Translates to: CHQSSQEHALPSSLPSPHRQCGR*LPVLMV
Trigger: CACCATCAGCACTGGGAGCCATCGCCCACATTGCCT...GTGGGGAGAGGGGAGGGAACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CCA 90 bp TGCCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCCTCTCCCCACCCTTCCTCAGAGGTGTaGGCCTCACTGTCACCAAGA +
Preference number: 2 (lower is better)
Translates to: CHQSSQEHALPSSLPSPHPSSEV*ASLSPR
Trigger: TCTTGGTGACAGTGAGGCCCACACCTCTGAGGAAGG...GTGGGGAGAGGGGAGGGAACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR GCA 90 bp CTCAGGGCCCTTCCTCAGAGGTGTGGGCCTCACTGTCACCAAGAATCTGGCTGCGATGGTGGTGATTGCTaGAGCACTGGCAGTGTTCCT +
Preference number: 2 (lower is better)
Translates to: LRALPQRCGPHCHQESGCDGGDC*STGSVP
Trigger: AGGAACACTGCCAGTGCTGCAGCAATCACCACCATC...GCAGCCAGATTCTTGGTGACAGTGAGGCCCACACCTCTGAGGAAGGGCCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CCA 90 bp TGCCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCCTCTCCCCACATGGATACGGCTCCCTaGGCCAGAGAACATTGGTTA +
Preference number: 2 (lower is better)
Translates to: CHQSSQEHALPSSLPSPHMDTAP*AREHWL
Trigger: TAACCAATGTTCTCTGGCCCAGGGAGCCGTATCCAT...GTGGGGAGAGGGGAGGGAACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR TCA 90 bp TGCCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCCTCTCCCCACGACAACTGCCTTGGGTaGAAATCAGAAGCAAGCAAC +
Preference number: 2 (lower is better)
Translates to: CHQSSQEHALPSSLPSPHDNCLG*KSEASN
Trigger: GTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTC...GTGGGGAGAGGGGAGGGAACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR TCA 90 bp CTCAGGGCCCTTCCTCAGAGGTGTGGGCCTCACTGTCACCAAGAATCTGGCTGCCATCCCCAGAAGTATTaGTATGCAACTAGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: LRALPQRCGPHCHQESGCHPQKY*YATSSW
Trigger: CCAGGAGCTAGTTGCATATCAATACTTCTGGGGATG...GCAGCCAGATTCTTGGTGACAGTGAGGCCCACACCTCTGAGGAAGGGCCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR TCA 90 bp CTCAGGGCCCTTCCTCAGAGGTGTGGGCCTCACTGTCACCAAGAATCTGGCTGCTCTGTGCTTTTGGGCTaGCTTGTCAATCTTTTCCCT +
Preference number: 2 (lower is better)
Translates to: LRALPQRCGPHCHQESGCSVLLG*LVNLFP
Trigger: AGGGAAAAGATTGACAAGTCAGCCCAAAAGCACAGA...GCAGCCAGATTCTTGGTGACAGTGAGGCCCACACCTCTGAGGAAGGGCCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR GCA 90 bp AATGCCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCCTCTCCCCATCTCAGAGACCAGCTaGAAAAGAAGACTTTGCAGC +
Preference number: 2 (lower is better)
Translates to: NAISLAKSTPSQVPSPLPISETS*KRRLCS
Trigger: GCTGCAAAGTCTTCTTTTGCAGCTGGTCTCTGAGAT...GGGGAGAGGGGAGGGAACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CCA 90 bp CTCAGGGCCCTTCCTCAGAGGTGTGGGCCTCACTGTCACCAAGAATCTGGCTGCTTTCCAATCCACTCATaGCCACTTTCTTCTGTCTCC +
Preference number: 2 (lower is better)
Translates to: LRALPQRCGPHCHQESGCFPIHS*PLSSVS
Trigger: GGAGACAGAAGAAAGTGGCCATGAGTGGATTGGAAA...GCAGCCAGATTCTTGGTGACAGTGAGGCCCACACCTCTGAGGAAGGGCCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CCA 90 bp TGCCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCCTCTCCCCACTGGGCCAGAGAACATTaGTTAAGTGGTTTTATCCCA +
Preference number: 2 (lower is better)
Translates to: CHQSSQEHALPSSLPSPHWAREH*LSGFIP
Trigger: TGGGATAAAACCACTTAACCAATGTTCTCTGGCCCA...GTGGGGAGAGGGGAGGGAACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR TCA 90 bp CTCAGGGCCCTTCCTCAGAGGTGTGGGCCTCACTGTCACCAAGAATCTGGCTGCAATTGGCAGTTGAGATaGTTATTTGCCATCCCCAAC +
Preference number: 2 (lower is better)
Translates to: LRALPQRCGPHCHQESGCNWQLR*LFAIPN
Trigger: GTTGGGGATGGCAAATAATCATCTCAACTGCCAATT...GCAGCCAGATTCTTGGTGACAGTGAGGCCCACACCTCTGAGGAAGGGCCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR GCA 90 bp AATGCCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCCTCTCCCCTCACAGAACTCTCAATaGCAGAAGGAAAGACTTACT +
Preference number: 2 (lower is better)
Translates to: NAISLAKSTPSQVPSPLPSQNSQ*QKERLT
Trigger: AGTAAGTCTTTCCTTCTGGCATTGAGAGTTCTGTGA...GGGGAGAGGGGAGGGAACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CCA 90 bp CTCAGGGCCCTTCCTCAGAGGTGTGGGCCTCACTGTCACCAAGAATCTGGCTGCCAGTATTTATATATCTaGTCCCTGATGGATACGGCT +
Preference number: 2 (lower is better)
Translates to: LRALPQRCGPHCHQESGCQYLYI*SLMDTA
Trigger: AGCCGTATCCATCAGGGACCAGATATATAAATACTG...GCAGCCAGATTCTTGGTGACAGTGAGGCCCACACCTCTGAGGAAGGGCCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CCA 90 bp GACGAGTATCTCTCCTGCCTGCGTAAGCTGCAGCACTGTCGAGAAGAGCTGAACCTTCCCATAAAGCCCTaGATGATGGGACGATTCCTT +
Preference number: 2 (lower is better)
Translates to: DEYLSCLRKLQHCREELNLPIKP*MMGRFL
Trigger: AAGGAATCGTCCCATCATCCAGGGCTTTATGGGAAG...GTTCAGCTCTTCTCGACAGTGCTGCAGCTTACGCAGGCAGGAGAGATACTCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR GCA 90 bp TCCATGTTTCCTGAGAATTCACTGTGTATACAGAGGGGCAATAGCTCCTCACCTCCTGCCTGCGTAAGCTaGAGCACTGTCGAGAAGAGC +
Preference number: 2 (lower is better)
Translates to: SMFPENSLCIQRGNSSSPPACVS*STVEKS
Trigger: GCTCTTCTCGACAGTGCTGCAGCTTACGCAGGCAGG...AGGTGAGGAGCTATTGCCCCTCTGTATACACAGTGAATTCTCAGGAAACATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR GCA 90 bp CCACAAATTCTAAGATATTGCTCTTCTCTTACCTGCCTAGAGGCAGCGGGATGGGACGAGTATCTCTCCTaGCTGCGTAAGCTGCAGCAC +
Preference number: 2 (lower is better)
Translates to: PQILRYCSSLTCLEAAGWDEYLS*LRKLQH
Trigger: GTGCTGCAGCTTACGCAGGCAGGAGAGATACTCGTC...CCATCCCGCTGCCTCTAGGCAGGTAAGAGAAGAGCAATATCTTAGAATTTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR TCA 90 bp GGGCTCATTTGCGAAATAGCAGAGAAACCTGGGAGGCAGTCAAAAAGCAGGGATGCATTTGTGGCCAACTaGTCTACAGCATTGTGCCTT +
Preference number: 2 (lower is better)
Translates to: GLICEIAEKPGRQSKSRDAFVAN*STALCL
Trigger: AAGGCACAATGCTGTAGATCAGTTGGCCACAAATGC...ATCCCTGCTTTTTGACTGCCTCCCAGGTTTCTCTGCTATTTCGCAAATGAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR TCA 90 bp CACATCCCCAGAAGTATTGATATGCAACTAGCTCCTGGGAAAGAAACTTGTACTACTGTCGAGAAGAGCTaGACCAGAGCCAGCAGCTGC +
Preference number: 2 (lower is better)
Translates to: HIPRSIDMQLAPGKETCTTVEKS*TRASSC
Trigger: GCAGCTGCTGGCTCTGGTTCAGCTCTTCTCGACAGT...AGTACAAGTTTCTTTCCCAGGAGCTAGTTGCATATCAATACTTCTGGGGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR GCA 90 bp CTGGGCTCTGTCCTAGACAGAAGTGACAGTGATGACTTTGGTGATGTTCTCCCCTGTCTTCCATCACCCTaGTTTTCCTCTATCATCTCC +
Preference number: 2 (lower is better)
Translates to: LGSVLDRSDSDDFGDVLPCLPSP*FSSIIS
Trigger: GGAGATGATAGAGGAAAAGCAGGGTGATGGAAGACA...GGGGAGAACATCACCAAAGTCATCACTGTCACTTCTGTCTAGGACAGAGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CCA 90 bp CTGGGCTCTGTCCTAGACAGAAGTGACAGTGATGACTTTGGTGATGTTCTCCCCTGCCCTTTGCATTTGTaGCCAACTGATCTACAGCAT +
Preference number: 2 (lower is better)
Translates to: LGSVLDRSDSDDFGDVLPCPLHL*PTDLQH
Trigger: ATGCTGTAGATCAGTTGGCCACAAATGCAAAGGGCA...GGGGAGAACATCACCAAAGTCATCACTGTCACTTCTGTCTAGGACAGAGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CCA 90 bp CCACAAATTCTAAGATATTGCTCTTCTCTTACCTGCCTAGAGGCAGCGGGATGGCCATGCAAGAGTGTTTaGCTTGTCTTCCATCACCCT +
Preference number: 2 (lower is better)
Translates to: PQILRYCSSLTCLEAAGWPCKSV*LVFHHP
Trigger: AGGGTGATGGAAGACAAGCCAAACACTCTTGCATGG...CCATCCCGCTGCCTCTAGGCAGGTAAGAGAAGAGCAATATCTTAGAATTTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CCA 90 bp GACGAGTATCTCTCCTGCCTGCGTAAGCTGCAGCACTGTCGAGAAGAGCTGAACAGAACATTGGTTAAGTaGTTTTATCCCAAGACAGGT +
Preference number: 2 (lower is better)
Translates to: DEYLSCLRKLQHCREELNRTLVK*FYPKTG
Trigger: ACCTGTCTTGGGATAAAACCACTTAACCAATGTTCT...GTTCAGCTCTTCTCGACAGTGCTGCAGCTTACGCAGGCAGGAGAGATACTCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CCA 90 bp CTAGCACTAGATAAGACTGGGGATACAAAGAAAAGATCCCAATCTTGCCCTCAACCTTCCCTAACGAAGTaGAGCCTGAGGGTACAGGGA +
Preference number: 2 (lower is better)
Translates to: LALDKTGDTKKRSQSCPQPSLTK*SLRVQG
Trigger: TCCCTGTACCCTCAGGCTCCACTTCGTTAGGGAAGG...TTGAGGGCAAGATTGGGATCTTTTCTTTGTATCCCCAGTCTTATCTAGTGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR TCA 90 bp CACATCCCCAGAAGTATTGATATGCAACTAGCTCCTGGGAAAGAAACTTGTACTTATATATCTGGTCCCTaGTGGATACGGCTCCCTGGG +
Preference number: 2 (lower is better)
Translates to: HIPRSIDMQLAPGKETCTYISGP*WIRLPG
Trigger: CCCAGGGAGCCGTATCCATCAGGGACCAGATATATA...AGTACAAGTTTCTTTCCCAGGAGCTAGTTGCATATCAATACTTCTGGGGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR TCA 90 bp CTGGGCTCTGTCCTAGACAGAAGTGACAGTGATGACTTTGGTGATGTTCTCCCCCTCTTAGCTAAAGTATaGAAGGGTGTTCTTTTAGCC +
Preference number: 2 (lower is better)
Translates to: LGSVLDRSDSDDFGDVLPLLAKV*KGVLLA
Trigger: GGCTAAAAGAACACCCTTTCATACTTTAGCTAAGAG...GGGGAGAACATCACCAAAGTCATCACTGTCACTTCTGTCTAGGACAGAGCCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR TCA 90 bp CCACAAATTCTAAGATATTGCTCTTCTCTTACCTGCCTAGAGGCAGCGGGATGGGAGCTTTTTAAGGACTaGTCATTGGCTCTGAGGACA +
Preference number: 2 (lower is better)
Translates to: PQILRYCSSLTCLEAAGWELFKD*SLALRT
Trigger: TGTCCTCAGAGCCAATGATCAGTCCTTAAAAAGCTC...CCATCCCGCTGCCTCTAGGCAGGTAAGAGAAGAGCAATATCTTAGAATTTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR GCA 90 bp CTAGCACTAGATAAGACTGGGGATACAAAGAAAAGATCCCAATCTTGCCCTCAAGCTGATGGTGGTGATTaGTGCAGCACTGGCAGTGTT +
Preference number: 2 (lower is better)
Translates to: LALDKTGDTKKRSQSCPQADGGD*CSTGSV
Trigger: AACACTGCCAGTGCTGCAGCAATCACCACCATCAGC...TTGAGGGCAAGATTGGGATCTTTTCTTTGTATCCCCAGTCTTATCTAGTGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR GCA 90 bp AATATATCAGCCCACGCCAACAACTGGCCATCCTGTCCCACTGTGCTTGGTTTATTTACAAGGTTACCATaGAAGAGTGTTTGGCTTGTC +
Preference number: 2 (lower is better)
Translates to: NISAHANNWPSCPTVLGLFTRLP*KSVWLV
Trigger: GACAAGCCAAACACTCTTGCATGGTAACCTTGTAAA...TAAACCAAGCACAGTGGGACAGGATGGCCAGTTGTTGGCGTGGGCTGATATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR TCA 90 bp CCACAAATTCTAAGATATTGCTCTTCTCTTACCTGCCTAGAGGCAGCGGGATGGCTTGGGTTTTCCAACTaGCTTAGGATTTCTGACTTT +
Preference number: 2 (lower is better)
Translates to: PQILRYCSSLTCLEAAGWLGFSN*LRISDF
Trigger: AAAGTCAGAAATCCTAAGTCAGTTGGAAAACCCAAG...CCATCCCGCTGCCTCTAGGCAGGTAAGAGAAGAGCAATATCTTAGAATTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR GCA 90 bp CCACAAATTCTAAGATATTGCTCTTCTCTTACCTGCCTAGAGGCAGCGGGATGGGTTGAGATGATTATTTaGCATCCCCAACCTAGAGAT +
Preference number: 2 (lower is better)
Translates to: PQILRYCSSLTCLEAAGWVEMII*HPQPRD
Trigger: ATCTCTAGGTTGGGGATGGCAAATAATCATCTCAAC...CCATCCCGCTGCCTCTAGGCAGGTAAGAGAAGAGCAATATCTTAGAATTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR CAA 90 bp TGGCCAACTGATCTACAGCATTGTGCCTTAGTGTATTCAAGACACTaGGAATTGGCAGTTGAGATGATTATTTGCCATCCCCAACCTAGA +
Preference number: 2 (lower is better)
Translates to: WPTDLQHCALVYSRH*ELAVEMIICHPQPR
Trigger: TCTAGGTTGGGGATGGCAAATAATCATCTCAACTGCCAATTCCAAGTGTCTTGAATACACTAAGGCACAATGCTGTAGATCAGTTGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR TCA 90 bp CACATCCCCAGAAGTATTGATATGCAACTAGCTCCTGGGAAAGAAACTTGTACTTTATCCCAAGACAGGTaGCAAAATGGGAGACAGAGT +
Preference number: 2 (lower is better)
Translates to: HIPRSIDMQLAPGKETCTLSQDR*QNGRQS
Trigger: ACTCTGTCTCCCATTTTGTCACCTGTCTTGGGATAA...AGTACAAGTTTCTTTCCCAGGAGCTAGTTGCATATCAATACTTCTGGGGATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CCA 90 bp GGGCTCATTTGCGAAATAGCAGAGAAACCTGGGAGGCAGTCAAAAAGCAGGGATAGTTTAAGTTGTGAGTaGATAACCACAGACATTCAT +
Preference number: 2 (lower is better)
Translates to: GLICEIAEKPGRQSKSRDSLSCE*ITTDIH
Trigger: ATGAATGTCTGTGGTTATCCACTCACAACTTAAACT...ATCCCTGCTTTTTGACTGCCTCCCAGGTTTCTCTGCTATTTCGCAAATGAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR TCA 90 bp AATTTGCTACTAGCACCACCATTACCTATTTACATGCCCTTTGCATTTGTGGCCCTTGGAATTGGCAGTTaGGATGATTATTTGCCATCC +
Preference number: 2 (lower is better)
Translates to: NLLLAPPLPIYMPFAFVALGIGS*DDYLPS
Trigger: GGATGGCAAATAATCATCTCAACTGCCAATTCCAAG...GGCCACAAATGCAAAGGGCATGTAAATAGGTAATGGTGGTGCTAGTAGCAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR CAA 90 bp ACTGATCTACAGCATTGTGCCTTAGTGTATTCAAGACACTTGGAATaGGCAGTTGAGATGATTATTTGCCATCCCCAACCTAGAGATGAT +
Preference number: 2 (lower is better)
Translates to: TDLQHCALVYSRHLE*AVEMIICHPQPRDD
Trigger: ATCATCTCTAGGTTGGGGATGGCAAATAATCATCTCAACTGCCAATTCCAAGTGTCTTGAATACACTAAGGCACAATGCTGTAGATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR TCA 90 bp CTAGCACTAGATAAGACTGGGGATACAAAGAAAAGATCCCAATCTTGCCCTCAAGACAACCTGATGATCTaGATAATTTGTGACAACTGC +
Preference number: 2 (lower is better)
Translates to: LALDKTGDTKKRSQSCPQDNLMI*IICDNC
Trigger: GCAGTTGTCACAAATTATTCAGATCATCAGGTTGTC...TTGAGGGCAAGATTGGGATCTTTTCTTTGTATCCCCAGTCTTATCTAGTGCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR GCA 90 bp CACATCCCCAGAAGTATTGATATGCAACTAGCTCCTGGGAAAGAAACTTGTACTTATTTACATGCCCTTTaGATTTGTGGCCAACTGATC +
Preference number: 2 (lower is better)
Translates to: HIPRSIDMQLAPGKETCTYLHAL*ICGQLI
Trigger: GATCAGTTGGCCACAAATGCAAAGGGCATGTAAATA...AGTACAAGTTTCTTTCCCAGGAGCTAGTTGCATATCAATACTTCTGGGGATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CCA 90 bp GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATCTCCTCAAATTCAGTTaGAGGCATATAAACATGCAG +
Preference number: 2 (lower is better)
Translates to: GENQKQATQRKTQKVWVHLLKFS*RHINMQ
Trigger: CTGCATGTTTATATGCCTCCAACTGAATTTGAGGAG...ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR TCA 90 bp CACATCCCCAGAAGTATTGATATGCAACTAGCTCCTGGGAAAGAAACTTGTACTGGTAAAAATTCCAAATaGGTGAAACTTACAAAGGGC +
Preference number: 2 (lower is better)
Translates to: HIPRSIDMQLAPGKETCTGKNSK*VKLTKG
Trigger: GCCCTTTGTAAGTTTCACTCATTTGGAATTTTTACC...AGTACAAGTTTCTTTCCCAGGAGCTAGTTGCATATCAATACTTCTGGGGATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR TCA 90 bp ATAGACAAGTTCCTTGTGTTTTCCAACAGGTTTGCTTCAAAATCAATCCTTACAACAAACTCAAATCCCTaGGAATGGCTGGGAAGGGAA +
Preference number: 2 (lower is better)
Translates to: IDKFLVFSNRFASKSILTTNSNP*EWLGRE
Trigger: TTCCCTTCCCAGCCATTCTCAGGGATTTGAGTTTGT...TGTAAGGATTGATTTTGAAGCAAACCTGTTGGAAAACACAAGGAACTTGTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR GCA 90 bp ATAGACAAGTTCCTTGTGTTTTCCAACAGGTTTGCTTCAAAATCAATCCTTACAAAAAGATCCCAATCTTaGCCTCAAGGAGCTCAGATT +
Preference number: 2 (lower is better)
Translates to: IDKFLVFSNRFASKSILTKRSQS*PQGAQI
Trigger: AATCTGAGCTCCTTGAGGGCAAGATTGGGATCTTTT...TGTAAGGATTGATTTTGAAGCAAACCTGTTGGAAAACACAAGGAACTTGTCTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CCA 90 bp ATAGACAAGTTCCTTGTGTTTTCCAACAGGTTTGCTTCAAAATCAATCCTTACATTAGCAGGGGCCTACTaGAAGTTAACCTTTATGTCA +
Preference number: 2 (lower is better)
Translates to: IDKFLVFSNRFASKSILTLAGAY*KLTFMS
Trigger: TGACATAAAGGTTAACTTCCAGTAGGCCCCTGCTAA...TGTAAGGATTGATTTTGAAGCAAACCTGTTGGAAAACACAAGGAACTTGTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR CCA 72 bp TGTCTCCCTGTCCCCCTACAGAGGCAATGTGGGCGATaGCTCCCAGTGCTGATGGTGGTGATTGCTGCAGCA +
Preference number: 3 (lower is better)
Translates to: CLPVPLQRQCGR*LPVLMVVIAAA
Trigger: TGCTGCAGCAATCACCACCATCAGCACTGGGAGCCATCGCCCACATTGCCTCTGTAGGGGGACAGGGAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR TCA 72 bp TCTCTTACCTGCCTAGAGGCAGCGGGATGGACTACATaGCCTCCTGGAGTCCCAGCCAGTTCTGGGAGTCTG +
Preference number: 3 (lower is better)
Translates to: SLTCLEAAGWTT*PPGVPASSGSL
Trigger: CAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCGCTGCCTCTAGGCAGGTAAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CAA 90 bp AATGCCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCCTCTCCCCACCATGCAAGAGTGTTaGGCTTGTCTTCCATCACCC +
Preference number: 3 (lower is better)
Translates to: NAISLAKSTPSQVPSPLPTMQEC*ACLPSP
Trigger: GGGTGATGGAAGACAAGCCAAACACTCTTGCATGGT...GGGGAGAGGGGAGGGAACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CAA 90 bp CTCAGGGCCCTTCCTCAGAGGTGTGGGCCTCACTGTCACCAAGAATCTGGCTGCGTGACAGTGATGACTTaGGTGATGTTCTCCCCAGTG +
Preference number: 3 (lower is better)
Translates to: LRALPQRCGPHCHQESGCVTVMT*VMFSPV
Trigger: CACTGGGGAGAACATCACCAAAGTCATCACTGTCAC...GCAGCCAGATTCTTGGTGACAGTGAGGCCCACACCTCTGAGGAAGGGCCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR CCA 72 bp TTTCTTCTGTCTCCCTGTCCCCCTACAGAGGCAATGTaGGCGATGGCTCCCAGTGCTGATGGTGGTGATTGC +
Preference number: 3 (lower is better)
Translates to: FLLSPCPPTEAM*AMAPSADGGDC
Trigger: GCAATCACCACCATCAGCACTGGGAGCCATCGCCCACATTGCCTCTGTAGGGGGACAGGGAGACAGAAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CAA 90 bp TGCCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCCTCTCCCCACCCTGTCCCACTGTGCTaGGTTTATACTATACTGACA +
Preference number: 3 (lower is better)
Translates to: CHQSSQEHALPSSLPSPHPVPLC*VYTILT
Trigger: TGTCAGTATAGTATAAACCAAGCACAGTGGGACAGG...GTGGGGAGAGGGGAGGGAACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CAA 90 bp CTCAGGGCCCTTCCTCAGAGGTGTGGGCCTCACTGTCACCAAGAATCTGGCTGCTGCTTTTGGGCTGACTaGTCAATCTTTTCCCTTCCT +
Preference number: 3 (lower is better)
Translates to: LRALPQRCGPHCHQESGCCFWAD*SIFSLP
Trigger: AGGAAGGGAAAAGATTGACAAGTCAGCCCAAAAGCA...GCAGCCAGATTCTTGGTGACAGTGAGGCCCACACCTCTGAGGAAGGGCCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR CCA 72 bp ATGGACTACATGACCTCCTGGAGTCCCAGCCAGTTCTaGGAGTCTGTTAAGTCCGGGATGTGTGGGAGCTTT +
Preference number: 3 (lower is better)
Translates to: MDYMTSWSPSQF*ESVKSGMCGSF
Trigger: AAAGCTCCCACACATCCCGGACTTAACAGACTCCCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR GCA 72 bp TCAGAATTAGACAACCTCAGTGACGAGTATCTCTCCTaGCTGCGTAAGCTGCAGCACTGTCGAGAAGAGCTG +
Preference number: 3 (lower is better)
Translates to: SELDNLSDEYLS*LRKLQHCREEL
Trigger: CAGCTCTTCTCGACAGTGCTGCAGCTTACGCAGGCAGGAGAGATACTCGTCACTGAGGTTGTCTAATTCTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR GCA 72 bp AGGGGCCTACTGGAAGTTAACCTTTATGTCAGAGAATaGCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGT +
Preference number: 3 (lower is better)
Translates to: RGLLEVNLYVRE*HQSSQEHALPS
Trigger: ACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCATTCTCTGACATAAAGGTTAACTTCCAGTAGGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR GCA 72 bp CAGCCCACGCCAACAACTGGCCATCCTGTCCCACTGTaGTTGGTTTATACTATACTGACATTATGGCAACCA +
Preference number: 3 (lower is better)
Translates to: QPTPTTGHPVPL*LVYTILTLWQP
Trigger: TGGTTGCCATAATGTCAGTATAGTATAAACCAAGCACAGTGGGACAGGATGGCCAGTTGTTGGCGTGGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR CCA 72 bp GGATACGGCTCCCTGGGCCAGAGAACATTGGTTAAGTaGTTTTATCCCAAGACAGGTGACAAAATGGGAGAC +
Preference number: 3 (lower is better)
Translates to: GYGSLGQRTLVK*FYPKTGDKMGD
Trigger: GTCTCCCATTTTGTCACCTGTCTTGGGATAAAACCACTTAACCAATGTTCTCTGGCCCAGGGAGCCGTATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CAA 90 bp AATATATCAGCCCACGCCAACAACTGGCCATCCTGTCCCACTGTGCTTGGTTTACTTCACCTGACCAGATaGTTCCTCAGAACTCTCAGT +
Preference number: 3 (lower is better)
Translates to: NISAHANNWPSCPTVLGLLHLTR*FLRTLS
Trigger: ACTGAGAGTTCTGAGGAACAATCTGGTCAGGTGAAG...TAAACCAAGCACAGTGGGACAGGATGGCCAGTTGTTGGCGTGGGCTGATATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR TCA 72 bp TGGGAAGGGAAGATGGTGGTAAAAATTCCAAATGAGTaGAACTTACAAAGGGCAGTCTCCCCTGCCTGGGCT +
Preference number: 3 (lower is better)
Translates to: WEGKMVVKIPNE*NLQRAVSPAWA
Trigger: AGCCCAGGCAGGGGAGACTGCCCTTTGTAAGTTTCACTCATTTGGAATTTTTACCACCATCTTCCCTTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR CCA 72 bp TCCCTGATGGATACGGCTCCCTGGGCCAGAGAACATTaGTTAAGTGGTTTTATCCCAAGACAGGTGACAAAA +
Preference number: 3 (lower is better)
Translates to: SLMDTAPWAREH*LSGFIPRQVTK
Trigger: TTTTGTCACCTGTCTTGGGATAAAACCACTTAACCAATGTTCTCTGGCCCAGGGAGCCGTATCCATCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CAA 90 bp GGGCTCATTTGCGAAATAGCAGAGAAACCTGGGAGGCAGTCAAAAAGCAGGGATGTGTATTCAAGACACTaGGAATTGGCAGTTGAGATG +
Preference number: 3 (lower is better)
Translates to: GLICEIAEKPGRQSKSRDVYSRH*ELAVEM
Trigger: CATCTCAACTGCCAATTCCAAGTGTCTTGAATACAC...ATCCCTGCTTTTTGACTGCCTCCCAGGTTTCTCTGCTATTTCGCAAATGAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CAA 90 bp TCCATGTTTCCTGAGAATTCACTGTGTATACAGAGGGGCAATAGCTCCTCACCTTTTTTAGATCAGGCTTaGCCCGTGTGGAGTCCAAAG +
Preference number: 3 (lower is better)
Translates to: SMFPENSLCIQRGNSSSPFLDQA*PVWSPK
Trigger: CTTTGGACTCCACACGGGCAAAGCCTGATCTAAAAA...AGGTGAGGAGCTATTGCCCCTCTGTATACACAGTGAATTCTCAGGAAACATGGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR GCA 72 bp GATAAGACTGGGGATACAAAGAAAAGATCCCAATCTTaGCCTCAAGGAGCTCAGATTCCAGCTGTCTGTCCA +
Preference number: 3 (lower is better)
Translates to: DKTGDTKKRSQS*PQGAQIPAVCP
Trigger: TGGACAGACAGCTGGAATCTGAGCTCCTTGAGGGCAAGATTGGGATCTTTTCTTTGTATCCCCAGTCTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR CCA 72 bp ATTCCAGCTGTCTGTCCAAGCTTAGCAGGGGCCTACTaGAAGTTAACCTTTATGTCAGAGAATGCCATCAGT +
Preference number: 3 (lower is better)
Translates to: IPAVCPSLAGAY*KLTFMSENAIS
Trigger: ACTGATGGCATTCTCTGACATAAAGGTTAACTTCCAGTAGGCCCCTGCTAAGCTTGGACAGACAGCTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CAA 90 bp TCCATGTTTCCTGAGAATTCACTGTGTATACAGAGGGGCAATAGCTCCTCACCTTTTGTGACAACTGCCTaGGGTGAAAATCAGAAGCAA +
Preference number: 3 (lower is better)
Translates to: SMFPENSLCIQRGNSSSPFVTTA*GENQKQ
Trigger: TTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAA...AGGTGAGGAGCTATTGCCCCTCTGTATACACAGTGAATTCTCAGGAAACATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR CCA 72 bp TATTTATATATCTGGTCCCTGATGGATACGGCTCCCTaGGCCAGAGAACATTGGTTAAGTGGTTTTATCCCA +
Preference number: 3 (lower is better)
Translates to: YLYIWSLMDTAP*AREHWLSGFIP
Trigger: TGGGATAAAACCACTTAACCAATGTTCTCTGGCCCAGGGAGCCGTATCCATCAGGGACCAGATATATAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR CCA 72 bp CACCACCATTACCTATTTACATGCCCTTTGCATTTGTaGCCAACTGATCTACAGCATTGTGCCTTAGTGTAT +
Preference number: 3 (lower is better)
Translates to: HHHYLFTCPLHL*PTDLQHCALVY
Trigger: ATACACTAAGGCACAATGCTGTAGATCAGTTGGCCACAAATGCAAAGGGCATGTAAATAGGTAATGGTGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR CCA 72 bp CAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTaGGTACATTACAGCTTGGGTTTTCCAACTGACTTA +
Preference number: 3 (lower is better)
Translates to: QKQATQRKTQKV*VHYSLGFPTDL
Trigger: TAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR CCA 72 bp ATAGTGAGGGCTCATTTGCGAAATAGCAGAGAAACCTaGGAGGCAGTCAAAAAGCAGGGATTTCAAAGTTTA +
Preference number: 3 (lower is better)
Translates to: IVRAHLRNSRET*EAVKKQGFQSL
Trigger: TAAACTTTGAAATCCCTGCTTTTTGACTGCCTCCCAGGTTTCTCTGCTATTTCGCAAATGAGCCCTCACTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CAA 90 bp CCAGTGAAAATGAAAACATCTCCACTAAGAGGACTTCCTAGTATAGAAATGGCAACATGCCCTTTGCATTaGTGGCCAACTGATCTACAG +
Preference number: 3 (lower is better)
Translates to: PVKMKTSPLRGLPSIEMATCPLH*WPTDLQ
Trigger: CTGTAGATCAGTTGGCCACAAATGCAAAGGGCATGT...TGCCATTTCTATACTAGGAAGTCCTCTTAGTGGAGATGTTTTCATTTTCACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CAA 90 bp GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATCTATTTACATGCCCTTaGCATTTGTGGCCAACTGAT +
Preference number: 3 (lower is better)
Translates to: GENQKQATQRKTQKVWVHLFTCP*HLWPTD
Trigger: ATCAGTTGGCCACAAATGCAAAGGGCATGTAAATAG...ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CAA 90 bp CACATCCCCAGAAGTATTGATATGCAACTAGCTCCTGGGAAAGAAACTTGTACTTGGGTACATTACAGCTaGGGTTTTCCAACTGACTTA +
Preference number: 3 (lower is better)
Translates to: HIPRSIDMQLAPGKETCTWVHYS*GFPTDL
Trigger: TAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCA...AGTACAAGTTTCTTTCCCAGGAGCTAGTTGCATATCAATACTTCTGGGGATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR CCA 72 bp ACAGTCAAAAGACAAACTCAAATCCCTGAGAATGGCTaGGAAGGGAAGATGGTGGTAAAAATTCCAAATGAG +
Preference number: 3 (lower is better)
Translates to: TVKRQTQIPENG*EGKMVVKIPNE
Trigger: CTCATTTGGAATTTTTACCACCATCTTCCCTTCCCAGCCATTCTCAGGGATTTGAGTTTGTCTTTTGACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR TCA 72 bp TTACCTATTTACATGCCCTTTGCATTTGTGGCCAACTaGTCTACAGCATTGTGCCTTAGTGTATTCAAGACA +
Preference number: 3 (lower is better)
Translates to: LPIYMPFAFVAN*STALCLSVFKT
Trigger: TGTCTTGAATACACTAAGGCACAATGCTGTAGATCAGTTGGCCACAAATGCAAAGGGCATGTAAATAGGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR GCA 72 bp TCAAGACACTTGGAATTGGCAGTTGAGATGATTATTTaGCATCCCCAACCTAGAGATGATCATTTACTGAGT +
Preference number: 3 (lower is better)
Translates to: SRHLELAVEMII*HPQPRDDHLLS
Trigger: ACTCAGTAAATGATCATCTCTAGGTTGGGGATGGCAAATAATCATCTCAACTGCCAATTCCAAGTGTCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR TCA 72 bp AATGCCAGAAGGAAAGACTTACTCTTAGCTAAAGTATaGAAGGGTGTTCTTTTAGCCGATGATAAGCATGGT +
Preference number: 3 (lower is better)
Translates to: NARRKDLLLAKV*KGVLLADDKHG
Trigger: ACCATGCTTATCATCGGCTAAAAGAACACCCTTTCATACTTTAGCTAAGAGTAAGTCTTTCCTTCTGGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR-3UTR CAA 90 bp ATAGACAAGTTCCTTGTGTTTTCCAACAGGTTTGCTTCAAAATCAATCCTTACAGTACTATCTACCAATTaGCTACTAGCACCACCATTA +
Preference number: 3 (lower is better)
Translates to: IDKFLVFSNRFASKSILTVLSTN*LLAPPL
Trigger: TAATGGTGGTGCTAGTAGCAAATTGGTAGATAGTAC...TGTAAGGATTGATTTTGAAGCAAACCTGTTGGAAAACACAAGGAACTTGTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp TGCCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCCTCTCCCCACAAAACCCGCCTGCGCTaGGAAGACCCTCGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: CHQSSQEHALPSSLPSPHKTRLR*EDPRSP
Trigger: CGGGCTGCGAGGGTCTTCCCAGCGCAGGCGGGTTTT...GTGGGGAGAGGGGAGGGAACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp TGCCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCCTCTCCCCACGCTGCCACCAGCAGCTaGGGGCTCGGTGATGACATG +
Preference number: 4 (lower is better)
Translates to: CHQSSQEHALPSSLPSPHAATSS*GLGDDM
Trigger: CATGTCATCACCGAGCCCTCAGCTGCTGGTGGCAGC...GTGGGGAGAGGGGAGGGAACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp AATGCCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCCTCTCCCCCCACAGCCGGCAGTGTaGCTATCTCAGAGGAGATGC +
Preference number: 4 (lower is better)
Translates to: NAISLAKSTPSQVPSPLPPQPAV*LSQRRC
Trigger: GCATCTCCTCTGAGATAGTCACACTGCCGGCTGTGG...GGGGAGAGGGGAGGGAACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCATT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp AATGCCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCCTCTCCCCACTGTCGAGAAGAGCTaGACCAGAGCCAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: NAISLAKSTPSQVPSPLPTVEKS*TRASSC
Trigger: GCAGCTGCTGGCTCTGGTTCAGCTCTTCTCGACAGT...GGGGAGAGGGGAGGGAACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR GCA 90 bp TGCCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCCTCTCCCCACCTGAGGAATGGAGCCTaGTGTAGGAGACTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: CHQSSQEHALPSSLPSPHLRNGA*CRRLLE
Trigger: CTCTAGCAGTCTCCTACAGCAGGCTCCATTCCTCAG...GTGGGGAGAGGGGAGGGAACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp AATGCCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCCTCTCCCCGTTCCCTTCCCTGGGTaGCATCTTTCAGCCAGACAC +
Preference number: 4 (lower is better)
Translates to: NAISLAKSTPSQVPSPLPVPFPG*HLSARH
Trigger: GTGTCTGGCTGAAAGATGCCACCCAGGGAAGGGAAC...GGGGAGAGGGGAGGGAACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp CTCAGGGCCCTTCCTCAGAGGTGTGGGCCTCACTGTCACCAAGAATCTGGCTGCCAGGCTTTGCCCGTGTaGAGTCCAAAGTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LRALPQRCGPHCHQESGCQALPV*SPKSFP
Trigger: AGGGAAGGACTTTGGACTCCACACGGGCAAAGCCTG...GCAGCCAGATTCTTGGTGACAGTGAGGCCCACACCTCTGAGGAAGGGCCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR GCA 90 bp AATGCCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCCTCTCCCCAGTATCTCTCCTGCCTaGGTAAGCTGCAGCACTGTC +
Preference number: 4 (lower is better)
Translates to: NAISLAKSTPSQVPSPLPSISPA*VSCSTV
Trigger: GACAGTGCTGCAGCTTACGCAGGCAGGAGAGATACT...GGGGAGAGGGGAGGGAACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp AATGCCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCCTCTCCCCAATGTCCCTCAGGCCTaGGAACAAACTCTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: NAISLAKSTPSQVPSPLPNVPQA*EQTLWD
Trigger: GTCCCAGAGAGTTTGTTCCCAGGCCTGAGGGACATT...GGGGAGAGGGGAGGGAACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp AATGCCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCCTCTCCCCATGAGATCCGGGCAGTaGATACTCGTAGTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: NAISLAKSTPSQVPSPLPMRSGQ*ILVVES
Trigger: TGACTCCACTACGAGTATTCACTGCCCGGATCTCAT...GGGGAGAGGGGAGGGAACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR GCA 90 bp AATGCCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCCTCTCCCCTCCCTCTGCAGCCCCTaGAAATGTGTGATGATCTCA +
Preference number: 4 (lower is better)
Translates to: NAISLAKSTPSQVPSPLPSLCSP*KCVMIS
Trigger: TGAGATCATCACACATTTGCAGGGGCTGCAGAGGGA...GGGGAGAGGGGAGGGAACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp GACGAGTATCTCTCCTGCCTGCGTAAGCTGCAGCACTGTCGAGAAGAGCTGAACAGGCAATGTGGGCGATaGCTCCCAGTGCTGATGGTG +
Preference number: 4 (lower is better)
Translates to: DEYLSCLRKLQHCREELNRQCGR*LPVLMV
Trigger: CACCATCAGCACTGGGAGCCATCGCCCACATTGCCT...GTTCAGCTCTTCTCGACAGTGCTGCAGCTTACGCAGGCAGGAGAGATACTCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp CTCAGGGCCCTTCCTCAGAGGTGTGGGCCTCACTGTCACCAAGAATCTGGCTGCACAAACTCAAATCCCTaGGAATGGCTGGGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: LRALPQRCGPHCHQESGCTNSNP*EWLGRE
Trigger: TTCCCTTCCCAGCCATTCTCAGGGATTTGAGTTTGT...GCAGCCAGATTCTTGGTGACAGTGAGGCCCACACCTCTGAGGAAGGGCCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp TGCCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCCTCTCCCCACGAGCTTTTTAAGGACTaGTCATTGGCTCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: CHQSSQEHALPSSLPSPHELFKD*SLALRT
Trigger: TGTCCTCAGAGCCAATGATCAGTCCTTAAAAAGCTC...GTGGGGAGAGGGGAGGGAACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR GCA 90 bp TGCCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCCTCTCCCCACTGTCTTCCATCACCCTaGTTTTCCTCTATCATCTCC +
Preference number: 4 (lower is better)
Translates to: CHQSSQEHALPSSLPSPHCLPSP*FSSIIS
Trigger: GGAGATGATAGAGGAAAAGCAGGGTGATGGAAGACA...GTGGGGAGAGGGGAGGGAACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp GACGAGTATCTCTCCTGCCTGCGTAAGCTGCAGCACTGTCGAGAAGAGCTGAACGCAGATGGCTTGGGGTaGACTCCGTCTCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: DEYLSCLRKLQHCREELNADGLG*TPSLSH
Trigger: ATGGGAAAGAGACGGAGTCCACCCCAAGCCATCTGC...GTTCAGCTCTTCTCGACAGTGCTGCAGCTTACGCAGGCAGGAGAGATACTCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp GACGAGTATCTCTCCTGCCTGCGTAAGCTGCAGCACTGTCGAGAAGAGCTGAACAGCAGGATTGGGGGTTaGCCTAGCAACCATGAGATC +
Preference number: 4 (lower is better)
Translates to: DEYLSCLRKLQHCREELNSRIGG*PSNHEI
Trigger: GATCTCATGGTTGCTAGGTCAACCCCCAATCCTGCT...GTTCAGCTCTTCTCGACAGTGCTGCAGCTTACGCAGGCAGGAGAGATACTCGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR GCA 90 bp AATTTGCTACTAGCACCACCATTACCTATTTACATGCCCTTTGCATTTGTGGCCCCTCGCAGCCCGCTCTaGTCCAGTCCCGCAGGCACC +
Preference number: 4 (lower is better)
Translates to: NLLLAPPLPIYMPFAFVAPRSPL*SSPAGT
Trigger: GGTGCCTGCGGGACTGGAGCAGAGCGGGCTGCGAGG...GGCCACAAATGCAAAGGGCATGTAAATAGGTAATGGTGGTGCTAGTAGCAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR GCA 90 bp GACGAGTATCTCTCCTGCCTGCGTAAGCTGCAGCACTGTCGAGAAGAGCTGAACGATGGTGGTGATTGCTaGAGCACTGGCAGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: DEYLSCLRKLQHCREELNDGGDC*STGSVP
Trigger: AGGAACACTGCCAGTGCTGCAGCAATCACCACCATC...GTTCAGCTCTTCTCGACAGTGCTGCAGCTTACGCAGGCAGGAGAGATACTCGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR GCA 90 bp CTGGGCTCTGTCCTAGACAGAAGTGACAGTGATGACTTTGGTGATGTTCTCCCCCCTGCCTGCGTAAGCTaGAGCACTGTCGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LGSVLDRSDSDDFGDVLPPACVS*STVEKS
Trigger: GCTCTTCTCGACAGTGCTGCAGCTTACGCAGGCAGG...GGGGAGAACATCACCAAAGTCATCACTGTCACTTCTGTCTAGGACAGAGCCCAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp GGGCTCATTTGCGAAATAGCAGAGAAACCTGGGAGGCAGTCAAAAAGCAGGGATGAGCAGACAGAAGGGTaGCGCTGGCAGCTGGAAACA +
Preference number: 4 (lower is better)
Translates to: GLICEIAEKPGRQSKSRDEQTEG*RWQLET
Trigger: TGTTTCCAGCTGCCAGCGTCACCCTTCTGTCTGCTC...ATCCCTGCTTTTTGACTGCCTCCCAGGTTTCTCTGCTATTTCGCAAATGAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR GCA 90 bp AATGCCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCCTCTCCCCCTTTATGTCAGAGAATaGCATCAGTCTAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: NAISLAKSTPSQVPSPLPLYVRE*HQSSQE
Trigger: CTCTTGGCTAGACTGATGGCATTCTCTGACATAAAG...GGGGAGAGGGGAGGGAACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp TGCCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCCTCTCCCCACAAAACTCAGAAGGTTTaGGTACATTACAGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: CHQSSQEHALPSSLPSPHKTQKV*VHYSLG
Trigger: ACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTT...GTGGGGAGAGGGGAGGGAACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp AATATATCAGCCCACGCCAACAACTGGCCATCCTGTCCCACTGTGCTTGGTTTACCTACAGAGGCAATGTaGGCGATGGCTCCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: NISAHANNWPSCPTVLGLPTEAM*AMAPSA
Trigger: AGCACTGGGAGCCATCGCCCACATTGCCTCTGTAGG...TAAACCAAGCACAGTGGGACAGGATGGCCAGTTGTTGGCGTGGGCTGATATATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp CTCAGGGCCCTTCCTCAGAGGTGTGGGCCTCACTGTCACCAAGAATCTGGCTGCCTTGGGTTTTCCAACTaGCTTAGGATTTCTGACTTT +
Preference number: 4 (lower is better)
Translates to: LRALPQRCGPHCHQESGCLGFSN*LRISDF
Trigger: AAAGTCAGAAATCCTAAGTCAGTTGGAAAACCCAAG...GCAGCCAGATTCTTGGTGACAGTGAGGCCCACACCTCTGAGGAAGGGCCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR GCA 90 bp AGCCCTACTTTCCTAGCATGCAGCACCCACATAGAGCAGGTATATTTACAAGGTACTGGAAAACCCGCCTaGGCTGGGAAGACCCTCGCA +
Preference number: 4 (lower is better)
Translates to: SPTFLACSTHIEQVYLQGTGKPA*AGKTLA
Trigger: TGCGAGGGTCTTCCCAGCGCAGGCGGGTTTTCCAGT...ACCTTGTAAATATACCTGCTCTATGTGGGTGCTGCATGCTAGGAAAGTAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp GGGCTCATTTGCGAAATAGCAGAGAAACCTGGGAGGCAGTCAAAAAGCAGGGATCTAAGTGAAGGCAGATaGCTTGGGGTGGACTCCGTC +
Preference number: 4 (lower is better)
Translates to: GLICEIAEKPGRQSKSRDLSEGR*LGVDSV
Trigger: GACGGAGTCCACCCCAAGCCATCTGCCTTCACTTAG...ATCCCTGCTTTTTGACTGCCTCCCAGGTTTCTCTGCTATTTCGCAAATGAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATATGCCAAGGGTCTGCTaGGCAGCTGCCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GENQKQATQRKTQKVWVHMPRVC*AAATSS
Trigger: GCTGCTGGTGGCAGCTGCTCAGCAGACCCTTGGCAT...ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp CCACAAATTCTAAGATATTGCTCTTCTCTTACCTGCCTAGAGGCAGCGGGATGGATAGCTCTGGAGCTCTaGTGCCCCTGCACAGTTGCA +
Preference number: 4 (lower is better)
Translates to: PQILRYCSSLTCLEAAGWIALEL*CPCTVA
Trigger: TGCAACTGTGCAGGGGCATCAGAGCTCCAGAGCTAT...CCATCCCGCTGCCTCTAGGCAGGTAAGAGAAGAGCAATATCTTAGAATTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp AATTTGCTACTAGCACCACCATTACCTATTTACATGCCCTTTGCATTTGTGGCCGCGGGATGGACTACATaGCCTCCTGGAGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: NLLLAPPLPIYMPFAFVAAGWTT*PPGVPA
Trigger: GGCTGGGACTCCAGGAGGTCATGTAGTCCATCCCGC...GGCCACAAATGCAAAGGGCATGTAAATAGGTAATGGTGGTGCTAGTAGCAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR GCA 90 bp CCACAAATTCTAAGATATTGCTCTTCTCTTACCTGCCTAGAGGCAGCGGGATGGCTTTTTGCGGCTTCCTaGCTGCTGCCAGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: PQILRYCSSLTCLEAAGWLFAAS*LLPERQ
Trigger: CTGCCTTTCTGGCAGCAGGCAGGAAGCCGCAAAAAG...CCATCCCGCTGCCTCTAGGCAGGTAAGAGAAGAGCAATATCTTAGAATTTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR GCA 90 bp CTGGGCTCTGTCCTAGACAGAAGTGACAGTGATGACTTTGGTGATGTTCTCCCCATGCCCCTGCACAGTTaGAATCATAGAGCACAGCTG +
Preference number: 4 (lower is better)
Translates to: LGSVLDRSDSDDFGDVLPMPLHS*NHRAQL
Trigger: CAGCTGTGCTCTATGATTGCAACTGTGCAGGGGCAT...GGGGAGAACATCACCAAAGTCATCACTGTCACTTCTGTCTAGGACAGAGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATAGGGCCTTCAAGTCCTaGAGCTGGTCCAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GENQKQATQRKTQKVWVHRAFKS*SWSREQ
Trigger: CTGCTCCCTGGACCAGCTTCAGGACTTGAAGGCCCT...ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR GCA 90 bp TCCATGTTTCCTGAGAATTCACTGTGTATACAGAGGGGCAATAGCTCCTCACCTGGCTCAGAAACTTTTTaGGGCTTCCTGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SMFPENSLCIQRGNSSSPGSETF*GFLPAA
Trigger: GGCAGCAGGCAGGAAGCCGCAAAAAGTTTCTGAGCC...AGGTGAGGAGCTATTGCCCCTCTGTATACACAGTGAATTCTCAGGAAACATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp AATATATCAGCCCACGCCAACAACTGGCCATCCTGTCCCACTGTGCTTGGTTTAATGGATACGGCTCCCTaGGCCAGAGAACATTGGTTA +
Preference number: 4 (lower is better)
Translates to: NISAHANNWPSCPTVLGLMDTAP*AREHWL
Trigger: TAACCAATGTTCTCTGGCCCAGGGAGCCGTATCCAT...TAAACCAAGCACAGTGGGACAGGATGGCCAGTTGTTGGCGTGGGCTGATATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp AGCCCTACTTTCCTAGCATGCAGCACCCACATAGAGCAGGTATATTTACAAGGTCCTTCCCTAACGAAGTaGAGCCTGAGGGTACAGGGA +
Preference number: 4 (lower is better)
Translates to: SPTFLACSTHIEQVYLQGPSLTK*SLRVQG
Trigger: TCCCTGTACCCTCAGGCTCCACTTCGTTAGGGAAGG...ACCTTGTAAATATACCTGCTCTATGTGGGTGCTGCATGCTAGGAAAGTAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR GCA 90 bp GACGAGTATCTCTCCTGCCTGCGTAAGCTGCAGCACTGTCGAGAAGAGCTGAACTTTACAAGGTTACCATaGAAGAGTGTTTGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: DEYLSCLRKLQHCREELNFTRLP*KSVWLV
Trigger: GACAAGCCAAACACTCTTGCATGGTAACCTTGTAAA...GTTCAGCTCTTCTCGACAGTGCTGCAGCTTACGCAGGCAGGAGAGATACTCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp CACATCCCCAGAAGTATTGATATGCAACTAGCTCCTGGGAAAGAAACTTGTACTCCGAGTTCCCTTCCCTaGGTGGCATCTTTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: HIPRSIDMQLAPGKETCTPSSLP*VASFSQ
Trigger: CTGGCTGAAAGATGCCACCCAGGGAAGGGAACTCGG...AGTACAAGTTTCTTTCCCAGGAGCTAGTTGCATATCAATACTTCTGGGGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR CAA 72 bp CCCACGCCAACAACTGGCCATCCTGTCCCACTGTGCTaGGTTTATACTATACTGACATTATGGCAACCATTG +
Preference number: 4 (lower is better)
Translates to: PTPTTGHPVPLC*VYTILTLWQPL
Trigger: CAATGGTTGCCATAATGTCAGTATAGTATAAACCAAGCACAGTGGGACAGGATGGCCAGTTGTTGGCGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp GGGCTCATTTGCGAAATAGCAGAGAAACCTGGGAGGCAGTCAAAAAGCAGGGATATACATGCTCAGGACTaGCAATCAGGCTGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: GLICEIAEKPGRQSKSRDIHAQD*QSGCFL
Trigger: GAGAAAACAGCCTGATTGTCAGTCCTGAGCATGTAT...ATCCCTGCTTTTTGACTGCCTCCCAGGTTTCTCTGCTATTTCGCAAATGAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp CTGGGCTCTGTCCTAGACAGAAGTGACAGTGATGACTTTGGTGATGTTCTCCCCAATTGGCAGTTGAGATaGTTATTTGCCATCCCCAAC +
Preference number: 4 (lower is better)
Translates to: LGSVLDRSDSDDFGDVLPNWQLR*LFAIPN
Trigger: GTTGGGGATGGCAAATAATCATCTCAACTGCCAATT...GGGGAGAACATCACCAAAGTCATCACTGTCACTTCTGTCTAGGACAGAGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR GCA 90 bp CACATCCCCAGAAGTATTGATATGCAACTAGCTCCTGGGAAAGAAACTTGTACTGACGAGTATCTCTCCTaGCTGCGTAAGCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: HIPRSIDMQLAPGKETCTDEYLS*LRKLQH
Trigger: GTGCTGCAGCTTACGCAGGCAGGAGAGATACTCGTC...AGTACAAGTTTCTTTCCCAGGAGCTAGTTGCATATCAATACTTCTGGGGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR GCA 90 bp GGGCTCATTTGCGAAATAGCAGAGAAACCTGGGAGGCAGTCAAAAAGCAGGGATATCTCAGAGACCAGCTaGAAAAGAAGACTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GLICEIAEKPGRQSKSRDISETS*KRRLCS
Trigger: GCTGCAAAGTCTTCTTTTGCAGCTGGTCTCTGAGAT...ATCCCTGCTTTTTGACTGCCTCCCAGGTTTCTCTGCTATTTCGCAAATGAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp AATATATCAGCCCACGCCAACAACTGGCCATCCTGTCCCACTGTGCTTGGTTTATTTCCAATCCACTCATaGCCACTTTCTTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: NISAHANNWPSCPTVLGLFPIHS*PLSSVS
Trigger: GGAGACAGAAGAAAGTGGCCATGAGTGGATTGGAAA...TAAACCAAGCACAGTGGGACAGGATGGCCAGTTGTTGGCGTGGGCTGATATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp CTGGGCTCTGTCCTAGACAGAAGTGACAGTGATGACTTTGGTGATGTTCTCCCCTTAGCAGGGGCCTACTaGAAGTTAACCTTTATGTCA +
Preference number: 4 (lower is better)
Translates to: LGSVLDRSDSDDFGDVLPLAGAY*KLTFMS
Trigger: TGACATAAAGGTTAACTTCCAGTAGGCCCCTGCTAA...GGGGAGAACATCACCAAAGTCATCACTGTCACTTCTGTCTAGGACAGAGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp CACATCCCCAGAAGTATTGATATGCAACTAGCTCCTGGGAAAGAAACTTGTACTGACTACATGACCTCCTaGAGTCCCAGCCAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: HIPRSIDMQLAPGKETCTDYMTS*SPSQFW
Trigger: CCAGAACTGGCTGGGACTCCAGGAGGTCATGTAGTC...AGTACAAGTTTCTTTCCCAGGAGCTAGTTGCATATCAATACTTCTGGGGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp GAGATGATTATTTGCCATCCCCAACCTAGAGATGATCATTTACTGAGTACCTTCACCTCTCCAGCTAAGTaGAGGCAGATGGCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: EMIICHPQPRDDHLLSTFTSPAK*RQMAWG
Trigger: ACCCCAAGCCATCTGCCTTCACTTAGCTGGAGAGGT...GAAGGTACTCAGTAAATGATCATCTCTAGGTTGGGGATGGCAAATAATCATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATACCTGCTCCAAGTGCTaGCATACATGCTCAGGACTG +
Preference number: 4 (lower is better)
Translates to: GENQKQATQRKTQKVWVHTCSKC*HTCSGL
Trigger: CAGTCCTGAGCATGTATGTCAGCACTTGGAGCAGGT...ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR GCA 90 bp CTGGGCTCTGTCCTAGACAGAAGTGACAGTGATGACTTTGGTGATGTTCTCCCCTATTTACATGCCCTTTaGATTTGTGGCCAACTGATC +
Preference number: 4 (lower is better)
Translates to: LGSVLDRSDSDDFGDVLPYLHAL*ICGQLI
Trigger: GATCAGTTGGCCACAAATGCAAAGGGCATGTAAATA...GGGGAGAACATCACCAAAGTCATCACTGTCACTTCTGTCTAGGACAGAGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR GCA 90 bp CACATCCCCAGAAGTATTGATATGCAACTAGCTCCTGGGAAAGAAACTTGTACTGCTGATGGTGGTGATTaGTGCAGCACTGGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: HIPRSIDMQLAPGKETCTADGGD*CSTGSV
Trigger: AACACTGCCAGTGCTGCAGCAATCACCACCATCAGC...AGTACAAGTTTCTTTCCCAGGAGCTAGTTGCATATCAATACTTCTGGGGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATGGTGACGCTGGCAGCTaGAAACATCCACAAAGGCTA +
Preference number: 4 (lower is better)
Translates to: GENQKQATQRKTQKVWVHGDAGS*KHPQRL
Trigger: TAGCCTTTGTGGATGTTTCCAGCTGCCAGCGTCACC...ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp CTGGGCTCTGTCCTAGACAGAAGTGACAGTGATGACTTTGGTGATGTTCTCCCCTGGGAACAAACTCTCTaGGACACTAAAAGAATAGAG +
Preference number: 4 (lower is better)
Translates to: LGSVLDRSDSDDFGDVLPWEQTL*DTKRIE
Trigger: CTCTATTCTTTTAGTGTCCCAGAGAGTTTGTTCCCA...GGGGAGAACATCACCAAAGTCATCACTGTCACTTCTGTCTAGGACAGAGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp AGCCCTACTTTCCTAGCATGCAGCACCCACATAGAGCAGGTATATTTACAAGGTCTTCCCATAAAGCCCTaGATGATGGGACGATTCCTT +
Preference number: 4 (lower is better)
Translates to: SPTFLACSTHIEQVYLQGLPIKP*MMGRFL
Trigger: AAGGAATCGTCCCATCATCCAGGGCTTTATGGGAAG...ACCTTGTAAATATACCTGCTCTATGTGGGTGCTGCATGCTAGGAAAGTAGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp CACATCCCCAGAAGTATTGATATGCAACTAGCTCCTGGGAAAGAAACTTGTACTGGGAAGGAGAAAGACTaGGATCTCAGAGACCAGCTG +
Preference number: 4 (lower is better)
Translates to: HIPRSIDMQLAPGKETCTGKEKD*DLRDQL
Trigger: CAGCTGGTCTCTGAGATCCCAGTCTTTCTCCTTCCC...AGTACAAGTTTCTTTCCCAGGAGCTAGTTGCATATCAATACTTCTGGGGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp GAGATGATTATTTGCCATCCCCAACCTAGAGATGATCATTTACTGAGTACCTTCCCTTCCTCAGAGGTGTaGGCCTCACTGTCACCAAGA +
Preference number: 4 (lower is better)
Translates to: EMIICHPQPRDDHLLSTFPSSEV*ASLSPR
Trigger: TCTTGGTGACAGTGAGGCCCACACCTCTGAGGAAGG...GAAGGTACTCAGTAAATGATCATCTCTAGGTTGGGGATGGCAAATAATCATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp GGGCTCATTTGCGAAATAGCAGAGAAACCTGGGAGGCAGTCAAAAAGCAGGGATCTCTTAGCTAAAGTATaGAAGGGTGTTCTTTTAGCC +
Preference number: 4 (lower is better)
Translates to: GLICEIAEKPGRQSKSRDLLAKV*KGVLLA
Trigger: GGCTAAAAGAACACCCTTTCATACTTTAGCTAAGAG...ATCCCTGCTTTTTGACTGCCTCCCAGGTTTCTCTGCTATTTCGCAAATGAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR GCA 90 bp GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATAGAGATAAGTCCCTCTaGAGCCCCTGCAAATGTGTG +
Preference number: 4 (lower is better)
Translates to: GENQKQATQRKTQKVWVHRDKSL*SPCKCV
Trigger: CACACATTTGCAGGGGCTGCAGAGGGACTTATCTCT...ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp CCACAAATTCTAAGATATTGCTCTTCTCTTACCTGCCTAGAGGCAGCGGGATGGTGGGCCAGAGAACATTaGTTAAGTGGTTTTATCCCA +
Preference number: 4 (lower is better)
Translates to: PQILRYCSSLTCLEAAGWWAREH*LSGFIP
Trigger: TGGGATAAAACCACTTAACCAATGTTCTCTGGCCCA...CCATCCCGCTGCCTCTAGGCAGGTAAGAGAAGAGCAATATCTTAGAATTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp CTAGCACTAGATAAGACTGGGGATACAAAGAAAAGATCCCAATCTTGCCCTCAAGGCTCGGTGATGACATaGGATCTAGAAGCAACATCA +
Preference number: 4 (lower is better)
Translates to: LALDKTGDTKKRSQSCPQGSVMT*DLEATS
Trigger: TGATGTTGCTTCTAGATCTCATGTCATCACCGAGCC...TTGAGGGCAAGATTGGGATCTTTTCTTTGTATCCCCAGTCTTATCTAGTGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp CACATCCCCAGAAGTATTGATATGCAACTAGCTCCTGGGAAAGAAACTTGTACTGCATTTGTGGCCAACTaGTCTACAGCATTGTGCCTT +
Preference number: 4 (lower is better)
Translates to: HIPRSIDMQLAPGKETCTAFVAN*STALCL
Trigger: AAGGCACAATGCTGTAGATCAGTTGGCCACAAATGC...AGTACAAGTTTCTTTCCCAGGAGCTAGTTGCATATCAATACTTCTGGGGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp CACATCCCCAGAAGTATTGATATGCAACTAGCTCCTGGGAAAGAAACTTGTACTATTAGACAACCTCAGTaGCGAGTATCTCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: HIPRSIDMQLAPGKETCTIRQPQ*RVSLLP
Trigger: AGGCAGGAGAGATACTCGTCACTGAGGTTGTCTAAT...AGTACAAGTTTCTTTCCCAGGAGCTAGTTGCATATCAATACTTCTGGGGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATCATCCCCAGAAGTATTaGTATGCAACTAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GENQKQATQRKTQKVWVHHPQKY*YATSSW
Trigger: CCAGGAGCTAGTTGCATATCAATACTTCTGGGGATG...ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp CCAGTGAAAATGAAAACATCTCCACTAAGAGGACTTCCTAGTATAGAAATGGCAGGTGAGAGGGTGACCTaGGATAGTGAGGGCTCATTT +
Preference number: 4 (lower is better)
Translates to: PVKMKTSPLRGLPSIEMAGERVT*DSEGSF
Trigger: AAATGAGCCCTCACTATCTCAGGTCACCCTCTCACC...TGCCATTTCTATACTAGGAAGTCCTCTTAGTGGAGATGTTTTCATTTTCACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp CCACAAATTCTAAGATATTGCTCTTCTCTTACCTGCCTAGAGGCAGCGGGATGGCATGAAAGTCTATGGTaGCACAAACTAACAACACAG +
Preference number: 4 (lower is better)
Translates to: PQILRYCSSLTCLEAAGWHESLW*HKLTTQ
Trigger: CTGTGTTGTTAGTTTGTGTCACCATAGACTTTCATG...CCATCCCGCTGCCTCTAGGCAGGTAAGAGAAGAGCAATATCTTAGAATTTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp AATATATCAGCCCACGCCAACAACTGGCCATCCTGTCCCACTGTGCTTGGTTTAGTATGGATAAGAACATaGAAGTCTATGGTGACACAA +
Preference number: 4 (lower is better)
Translates to: NISAHANNWPSCPTVLGLVWIRT*KSMVTQ
Trigger: TTGTGTCACCATAGACTTTCATGTTCTTATCCATAC...TAAACCAAGCACAGTGGGACAGGATGGCCAGTTGTTGGCGTGGGCTGATATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp CTAGCACTAGATAAGACTGGGGATACAAAGAAAAGATCCCAATCTTGCCCTCAACCAATCTCAAGGATGTaGAGTCCAAAAGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LALDKTGDTKKRSQSCPQPISRM*SPKVRK
Trigger: CTTCCTGACTTTTGGACTTCACATCCTTGAGATTGG...TTGAGGGCAAGATTGGGATCTTTTCTTTGTATCCCCAGTCTTATCTAGTGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTCAGCAAAGTCATTCTaGGTCCTAAATCGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: GENQKQATQRKTQKVWVHSAKSF*VLNRVL
Trigger: CAGAACCCGATTTAGGACTCAGAATGACTTTGCTGA...ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp AGCCCTACTTTCCTAGCATGCAGCACCCACATAGAGCAGGTATATTTACAAGGTGACAACCTGATGATCTaGATAATTTGTGACAACTGC +
Preference number: 4 (lower is better)
Translates to: SPTFLACSTHIEQVYLQGDNLMI*IICDNC
Trigger: GCAGTTGTCACAAATTATTCAGATCATCAGGTTGTC...ACCTTGTAAATATACCTGCTCTATGTGGGTGCTGCATGCTAGGAAAGTAGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR GCA 90 bp AGCCCTACTTTCCTAGCATGCAGCACCCACATAGAGCAGGTATATTTACAAGGTGTTGAGATGATTATTTaGCATCCCCAACCTAGAGAT +
Preference number: 4 (lower is better)
Translates to: SPTFLACSTHIEQVYLQGVEMII*HPQPRD
Trigger: ATCTCTAGGTTGGGGATGGCAAATAATCATCTCAAC...ACCTTGTAAATATACCTGCTCTATGTGGGTGCTGCATGCTAGGAAAGTAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATTGCCCTTTGCATTTGTaGCCAACTGATCTACAGCAT +
Preference number: 4 (lower is better)
Translates to: GENQKQATQRKTQKVWVHCPLHL*PTDLQH
Trigger: ATGCTGTAGATCAGTTGGCCACAAATGCAAAGGGCA...ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp GAGATGATTATTTGCCATCCCCAACCTAGAGATGATCATTTACTGAGTACCTTCCCATGCAAGAGTGTTTaGCTTGTCTTCCATCACCCT +
Preference number: 4 (lower is better)
Translates to: EMIICHPQPRDDHLLSTFPCKSV*LVFHHP
Trigger: AGGGTGATGGAAGACAAGCCAAACACTCTTGCATGG...GAAGGTACTCAGTAAATGATCATCTCTAGGTTGGGGATGGCAAATAATCATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR CAA 72 bp CAGCATTGTGCCTTAGTGTATTCAAGACACTTGGAATaGGCAGTTGAGATGATTATTTGCCATCCCCAACCT +
Preference number: 4 (lower is better)
Translates to: QHCALVYSRHLE*AVEMIICHPQP
Trigger: AGGTTGGGGATGGCAAATAATCATCTCAACTGCCAATTCCAAGTGTCTTGAATACACTAAGGCACAATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp CTAGCACTAGATAAGACTGGGGATACAAAGAAAAGATCCCAATCTTGCCCTCAACTTGGAATTGGCAGTTaGGATGATTATTTGCCATCC +
Preference number: 4 (lower is better)
Translates to: LALDKTGDTKKRSQSCPQLGIGS*DDYLPS
Trigger: GGATGGCAAATAATCATCTCAACTGCCAATTCCAAG...TTGAGGGCAAGATTGGGATCTTTTCTTTGTATCCCCAGTCTTATCTAGTGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp GAGATGATTATTTGCCATCCCCAACCTAGAGATGATCATTTACTGAGTACCTTCTTATCCCAAGACAGGTaGCAAAATGGGAGACAGAGT +
Preference number: 4 (lower is better)
Translates to: EMIICHPQPRDDHLLSTFLSQDR*QNGRQS
Trigger: ACTCTGTCTCCCATTTTGTCACCTGTCTTGGGATAA...GAAGGTACTCAGTAAATGATCATCTCTAGGTTGGGGATGGCAAATAATCATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR GCA 90 bp CTAGCACTAGATAAGACTGGGGATACAAAGAAAAGATCCCAATCTTGCCCTCAACATCCTGTCCCACTGTaGTTGGTTTATACTATACTG +
Preference number: 4 (lower is better)
Translates to: LALDKTGDTKKRSQSCPQHPVPL*LVYTIL
Trigger: CAGTATAGTATAAACCAAGCACAGTGGGACAGGATG...TTGAGGGCAAGATTGGGATCTTTTCTTTGTATCCCCAGTCTTATCTAGTGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR GCA 90 bp AATTTGCTACTAGCACCACCATTACCTATTTACATGCCCTTTGCATTTGTGGCCTCGGTGTCTCTCATTTaGAAAGCACTTGCACGTAAA +
Preference number: 4 (lower is better)
Translates to: NLLLAPPLPIYMPFAFVASVSLI*KALARK
Trigger: TTTACGTGCAAGTGCTTTGCAAATGAGAGACACCGA...GGCCACAAATGCAAAGGGCATGTAAATAGGTAATGGTGGTGCTAGTAGCAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR GCA 90 bp AATTTGCTACTAGCACCACCATTACCTATTTACATGCCCTTTGCATTTGTGGCCAAAAGATCCCAATCTTaGCCTCAAGGAGCTCAGATT +
Preference number: 4 (lower is better)
Translates to: NLLLAPPLPIYMPFAFVAKRSQS*PQGAQI
Trigger: AATCTGAGCTCCTTGAGGGCAAGATTGGGATCTTTT...GGCCACAAATGCAAAGGGCATGTAAATAGGTAATGGTGGTGCTAGTAGCAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR CAA 72 bp GATCTACAGCATTGTGCCTTAGTGTATTCAAGACACTaGGAATTGGCAGTTGAGATGATTATTTGCCATCCC +
Preference number: 4 (lower is better)
Translates to: DLQHCALVYSRH*ELAVEMIICHP
Trigger: GGGATGGCAAATAATCATCTCAACTGCCAATTCCAAGTGTCTTGAATACACTAAGGCACAATGCTGTAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR CAA 72 bp GTATATTTACAAGGTTACCATGCAAGAGTGTTTGGCTaGTCTTCCATCACCCTGCTTTTCCTCTATCATCTC +
Preference number: 4 (lower is better)
Translates to: VYLQGYHARVFG*SSITLLFLYHL
Trigger: GAGATGATAGAGGAAAAGCAGGGTGATGGAAGACAAGCCAAACACTCTTGCATGGTAACCTTGTAAATATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp ATAGACAAGTTCCTTGTGTTTTCCAACAGGTTTGCTTCAAAATCAATCCTTACATTTCAGCCAGACACTTaGGGAGGGGCGTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: IDKFLVFSNRFASKSILTFQPDT*GGAFFF
Trigger: GAAAAAGAACGCCCCTCCTCAAGTGTCTGGCTGAAA...TGTAAGGATTGATTTTGAAGCAAACCTGTTGGAAAACACAAGGAACTTGTCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp CCAGTGAAAATGAAAACATCTCCACTAAGAGGACTTCCTAGTATAGAAATGGCATCTGTGCTTTTGGGCTaGCTTGTCAATCTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: PVKMKTSPLRGLPSIEMASVLLG*LVNLFP
Trigger: AGGGAAAAGATTGACAAGTCAGCCCAAAAGCACAGA...TGCCATTTCTATACTAGGAAGTCCTCTTAGTGGAGATGTTTTCATTTTCACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR GCA 90 bp TCCATGTTTCCTGAGAATTCACTGTGTATACAGAGGGGCAATAGCTCCTCACCTAGGCAGAAATTTTTATaGTCACAGAGTATGGATAAG +
Preference number: 4 (lower is better)
Translates to: SMFPENSLCIQRGNSSSPRQKFL*SQSMDK
Trigger: CTTATCCATACTCTGTGAGCATAAAAATTTCTGCCT...AGGTGAGGAGCTATTGCCCCTCTGTATACACAGTGAATTCTCAGGAAACATGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR GCA 90 bp AGCCCTACTTTCCTAGCATGCAGCACCCACATAGAGCAGGTATATTTACAAGGTCAAATTCTAAGATATTaGTCTTCTCTTACCTGCCTA +
Preference number: 4 (lower is better)
Translates to: SPTFLACSTHIEQVYLQGQILRY*SSLTCL
Trigger: TAGGCAGGTAAGAGAAGAGCAATATCTTAGAATTTG...ACCTTGTAAATATACCTGCTCTATGTGGGTGCTGCATGCTAGGAAAGTAGGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp CTAGCACTAGATAAGACTGGGGATACAAAGAAAAGATCCCAATCTTGCCCTCAACAGTATTTATATATCTaGTCCCTGATGGATACGGCT +
Preference number: 4 (lower is better)
Translates to: LALDKTGDTKKRSQSCPQQYLYI*SLMDTA
Trigger: AGCCGTATCCATCAGGGACCAGATATATAAATACTG...TTGAGGGCAAGATTGGGATCTTTTCTTTGTATCCCCAGTCTTATCTAGTGCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp ATAGACAAGTTCCTTGTGTTTTCCAACAGGTTTGCTTCAAAATCAATCCTTACAGACAACTGCCTTGGGTaGAAATCAGAAGCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: IDKFLVFSNRFASKSILTDNCLG*KSEASN
Trigger: GTTGCTTGCTTCTGATTTTCACCCAAGGCAGTTGTC...TGTAAGGATTGATTTTGAAGCAAACCTGTTGGAAAACACAAGGAACTTGTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp GAGATGATTATTTGCCATCCCCAACCTAGAGATGATCATTTACTGAGTACCTTCCTCCTCAAATTCAGTTaGAGGCATATAAACATGCAG +
Preference number: 4 (lower is better)
Translates to: EMIICHPQPRDDHLLSTFLLKFS*RHINMQ
Trigger: CTGCATGTTTATATGCCTCCAACTGAATTTGAGGAG...GAAGGTACTCAGTAAATGATCATCTCTAGGTTGGGGATGGCAAATAATCATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATAGAACATTGGTTAAGTaGTTTTATCCCAAGACAGGT +
Preference number: 4 (lower is better)
Translates to: GENQKQATQRKTQKVWVHRTLVK*FYPKTG
Trigger: ACCTGTCTTGGGATAAAACCACTTAACCAATGTTCT...ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR CAA 72 bp CAGCGAAAAACTCAGAAGGTTTGGGTACATTACAGCTaGGGTTTTCCAACTGACTTAGGATTTCTGACTTTT +
Preference number: 4 (lower is better)
Translates to: QRKTQKVWVHYS*GFPTDLGFLTF
Trigger: AAAAGTCAGAAATCCTAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCAAACCTTCTGAGTTTTTCGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp CCAGTGAAAATGAAAACATCTCCACTAAGAGGACTTCCTAGTATAGAAATGGCAGATCTGAATAATTTGTaGCAACTGCCTTGGGTGAAA +
Preference number: 4 (lower is better)
Translates to: PVKMKTSPLRGLPSIEMADLNNL*QLPWVK
Trigger: TTTCACCCAAGGCAGTTGTCACAAATTATTCAGATC...TGCCATTTCTATACTAGGAAGTCCTCTTAGTGGAGATGTTTTCATTTTCACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp CCAGTGAAAATGAAAACATCTCCACTAAGAGGACTTCCTAGTATAGAAATGGCATCAAAGTTTAAGTTGTaGGTGGATAACCACAGACAT +
Preference number: 4 (lower is better)
Translates to: PVKMKTSPLRGLPSIEMASKFKL*VDNHRH
Trigger: ATGTCTGTGGTTATCCACTCACAACTTAAACTTTGA...TGCCATTTCTATACTAGGAAGTCCTCTTAGTGGAGATGTTTTCATTTTCACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CCA 90 bp GAGATGATTATTTGCCATCCCCAACCTAGAGATGATCATTTACTGAGTACCTTCAGTTTAAGTTGTGAGTaGATAACCACAGACATTCAT +
Preference number: 4 (lower is better)
Translates to: EMIICHPQPRDDHLLSTFSLSCE*ITTDIH
Trigger: ATGAATGTCTGTGGTTATCCACTCACAACTTAAACT...GAAGGTACTCAGTAAATGATCATCTCTAGGTTGGGGATGGCAAATAATCATCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
3UTR CAA 72 bp GGAAAGAAACTTGTACTAAGGTCACTTCTAGGTCGTTaGTTCTATAAGAACTTCATTTTTCGGTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: GKKLVLRSLLGR*FYKNFIFRCLS
Trigger: TGAGAGACACCGAAAAATGAAGTTCTTATAGAACAAACGACCTAGAAGTGACCTTAGTACAAGTTTCTTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR GCA 90 bp ATAGACAAGTTCCTTGTGTTTTCCAACAGGTTTGCTTCAAAATCAATCCTTACATCACAGAACTCTCAATaGCAGAAGGAAAGACTTACT +
Preference number: 4 (lower is better)
Translates to: IDKFLVFSNRFASKSILTSQNSQ*QKERLT
Trigger: AGTAAGTCTTTCCTTCTGGCATTGAGAGTTCTGTGA...TGTAAGGATTGATTTTGAAGCAAACCTGTTGGAAAACACAAGGAACTTGTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR TCA 90 bp ATAGACAAGTTCCTTGTGTTTTCCAACAGGTTTGCTTCAAAATCAATCCTTACAGGTAAAAATTCCAAATaGGTGAAACTTACAAAGGGC +
Preference number: 4 (lower is better)
Translates to: IDKFLVFSNRFASKSILTGKNSK*VKLTKG
Trigger: GCCCTTTGTAAGTTTCACTCATTTGGAATTTTTACC...TGTAAGGATTGATTTTGAAGCAAACCTGTTGGAAAACACAAGGAACTTGTCTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS GCA 90 bp GCTAGTCCCCCACGCCCAGCCGCAAGTAACACTGGAAAACCCGCCTaGGCTGGGAAGACCCTCGCAGCCCGCTCTGCTCCAGTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: ASPPRPAASNTGKPA*AGKTLAARSAPVPQ
Trigger: CTGCGGGACTGGAGCAGAGCGGGCTGCGAGGGTCTTCCCAGCGCAGGCGGGTTTTCCAGTGTTACTTGCGGCTGGGCGTGGGGGACTAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS TCA 90 bp GCTGGCTTCAGTCCCCGGGCCACAGCCAGCACCTCTCCAGCTAAGTaGAGGCAGATGGCTTGGGGTGGACTCCGTCTCTTTCCCATGCCA +
Preference number: 5 (lower is better)
Translates to: AGFSPRATASTSPAK*RQMAWGGLRLFPMP
Trigger: TGGCATGGGAAAGAGACGGAGTCCACCCCAAGCCATCTGCCTTCACTTAGCTGGAGAGGTGCTGGCTGTGGCCCGGGGACTGAAGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS CCA 90 bp GTCCCCGGGCCACAGCCAGCACCTCTCCAGCTAAGTGAAGGCAGATaGCTTGGGGTGGACTCCGTCTCTTTCCCATGCCAAGGGTCTGCT +
Preference number: 5 (lower is better)
Translates to: VPGPQPAPLQLSEGR*LGVDSVSFPCQGSA
Trigger: AGCAGACCCTTGGCATGGGAAAGAGACGGAGTCCACCCCAAGCCATCTGCCTTCACTTAGCTGGAGAGGTGCTGGCTGTGGCCCGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CAA 90 bp CTCAGGGCCCTTCCTCAGAGGTGTGGGCCTCACTGTCACCAAGAATCTGGCTGCGGGCTCAGAAACTTTTaGCGGCTTCCTGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LRALPQRCGPHCHQESGCGLRNF*RLPACC
Trigger: GCAGCAGGCAGGAAGCCGCAAAAAGTTTCTGAGCCC...GCAGCCAGATTCTTGGTGACAGTGAGGCCCACACCTCTGAGGAAGGGCCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS CCA 90 bp CCTGAAGCTGGTCCAGGGAGCAGACAGAAGGGTGACGCTGGCAGCTaGAAACATCCACAAAGGCTATGGTACCAAGCAGCACCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: PEAGPGSRQKGDAGS*KHPQRLWYQAAPAP
Trigger: TGGAGCAGGTGCTGCTTGGTACCATAGCCTTTGTGGATGTTTCCAGCTGCCAGCGTCACCCTTCTGTCTGCTCCCTGGACCAGCTTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CAA 90 bp TGCCATCAGTCTAGCCAAGAGCACGCCCTCCCAAGTTCCCTCCCCTCTCCCCACACCATGCAAGAGTGTTaGGCTTGTCTTCCATCACCC +
Preference number: 5 (lower is better)
Translates to: CHQSSQEHALPSSLPSPHTMQEC*ACLPSP
Trigger: GGGTGATGGAAGACAAGCCAAACACTCTTGCATGGT...GTGGGGAGAGGGGAGGGAACTTGGGAGGGCGTGCTCTTGGCTAGACTGATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS TCA 90 bp CAGGAAGCCAAGCCCCTTCAGCTCCTCCAGATAGCTCTGGAGCTCTaGTGCCCCTGCACAGTTGCAATCATAGAGCACAGCTGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: QEAKPLQLLQIALEL*CPCTVAIIEHSWLQ
Trigger: CTGAAGCCAGCTGTGCTCTATGATTGCAACTGTGCAGGGGCATCAGAGCTCCAGAGCTATCTGGAGGAGCTGAAGGGGCTTGGCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS TCA 90 bp TCTGCTGAGCAGCTGCCACCAGCAGCTGAGGGCTCGGTGATGACATaGGATCTAGAAGCAACATCAAGAATGGCCTCCTTAGCTAGCCCG +
Preference number: 5 (lower is better)
Translates to: SAEQLPPAAEGSVMT*DLEATSRMASLASP
Trigger: CGGGCTAGCTAAGGAGGCCATTCTTGATGTTGCTTCTAGATCTCATGTCATCACCGAGCCCTCAGCTGCTGGTGGCAGCTGCTCAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS CCA 90 bp GCAACATCAAGAATGGCCTCCTTAGCTAGCCCGAGTTCCCTTCCCTaGGTGGCATCTTTCAGCCAGACACTTGAGGAGGGGCGTTCTTTT +
Preference number: 5 (lower is better)
Translates to: ATSRMASLASPSSLP*VASFSQTLEEGRSF
Trigger: AAAAGAACGCCCCTCCTCAAGTGTCTGGCTGAAAGATGCCACCCAGGGAAGGGAACTCGGGCTAGCTAAGGAGGCCATTCTTGATGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CAA 90 bp CTGGGCTCTGTCCTAGACAGAAGTGACAGTGATGACTTTGGTGATGTTCTCCCCGTGAAGGCAGATGGCTaGGGGTGGACTCCGTCTCTT +
Preference number: 5 (lower is better)
Translates to: LGSVLDRSDSDDFGDVLPVKADG*GWTPSL
Trigger: AAGAGACGGAGTCCACCCCAAGCCATCTGCCTTCAC...GGGGAGAACATCACCAAAGTCATCACTGTCACTTCTGTCTAGGACAGAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS TCA 90 bp AGAGCAGGATTGGGGGTTGACCTAGCAACCATGAGATCCGGGCAGTaGATACTCGTAGTGGAGTCAGAGCTAAGCAGTTGTCATCTCCCT +
Preference number: 5 (lower is better)
Translates to: RAGLGVDLATMRSGQ*ILVVESELSSCHLP
Trigger: AGGGAGATGACAACTGCTTAGCTCTGACTCCACTACGAGTATTCACTGCCCGGATCTCATGGTTGCTAGGTCAACCCCCAATCCTGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS GCA 90 bp GGATCCCAAATACAGTACACAGATTCCAGTCTGAGGAATGGAGCCTaGTGTAGGAGACTGCTAGAGATAAGTCCCTCTGCAGCCCCTGCA +
Preference number: 5 (lower is better)
Translates to: GSQIQYTDSSLRNGA*CRRLLEISPSAAPA
Trigger: TGCAGGGGCTGCAGAGGGACTTATCTCTAGCAGTCTCCTACAGCAGGCTCCATTCCTCAGACTGGAATCTGTGTACTGTATTTGGGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CAA 90 bp GACGAGTATCTCTCCTGCCTGCGTAAGCTGCAGCACTGTCGAGAAGAGCTGAACTGCTTTTGGGCTGACTaGTCAATCTTTTCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: DEYLSCLRKLQHCREELNCFWAD*SIFSLP
Trigger: AGGAAGGGAAAAGATTGACAAGTCAGCCCAAAAGCA...GTTCAGCTCTTCTCGACAGTGCTGCAGCTTACGCAGGCAGGAGAGATACTCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CAA 90 bp GACGAGTATCTCTCCTGCCTGCGTAAGCTGCAGCACTGTCGAGAAGAGCTGAACCTATTTACATGCCCTTaGCATTTGTGGCCAACTGAT +
Preference number: 5 (lower is better)
Translates to: DEYLSCLRKLQHCREELNLFTCP*HLWPTD
Trigger: ATCAGTTGGCCACAAATGCAAAGGGCATGTAAATAG...GTTCAGCTCTTCTCGACAGTGCTGCAGCTTACGCAGGCAGGAGAGATACTCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS TCA 90 bp ACATCCACAAAGGCTATGGTACCAAGCAGCACCTGCTCCAAGTGCTaGCATACATGCTCAGGACTGACAATCAGGCTGTTTTCTCCAATC +
Preference number: 5 (lower is better)
Translates to: TSTKAMVPSSTCSKC*HTCSGLTIRLFSPI
Trigger: GATTGGAGAAAACAGCCTGATTGTCAGTCCTGAGCATGTATGTCAGCACTTGGAGCAGGTGCTGCTTGGTACCATAGCCTTTGTGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CAA 90 bp AATATATCAGCCCACGCCAACAACTGGCCATCCTGTCCCACTGTGCTTGGTTTATTTTTAGATCAGGCTTaGCCCGTGTGGAGTCCAAAG +
Preference number: 5 (lower is better)
Translates to: NISAHANNWPSCPTVLGLFLDQA*PVWSPK
Trigger: CTTTGGACTCCACACGGGCAAAGCCTGATCTAAAAA...TAAACCAAGCACAGTGGGACAGGATGGCCAGTTGTTGGCGTGGGCTGATATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS TCA 90 bp TACCAAGCAGCACCTGCTCCAAGTGCTGACATACATGCTCAGGACTaGCAATCAGGCTGTTTTCTCCAATCTCAAGGATGTGAAGTCCAA +
Preference number: 5 (lower is better)
Translates to: YQAAPAPSADIHAQD*QSGCFLQSQGCEVQ
Trigger: TTGGACTTCACATCCTTGAGATTGGAGAAAACAGCCTGATTGTCAGTCCTGAGCATGTATGTCAGCACTTGGAGCAGGTGCTGCTTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CAA 90 bp AGCCCTACTTTCCTAGCATGCAGCACCCACATAGAGCAGGTATATTTACAAGGTGTGACAGTGATGACTTaGGTGATGTTCTCCCCAGTG +
Preference number: 5 (lower is better)
Translates to: SPTFLACSTHIEQVYLQGVTVMT*VMFSPV
Trigger: CACTGGGGAGAACATCACCAAAGTCATCACTGTCAC...ACCTTGTAAATATACCTGCTCTATGTGGGTGCTGCATGCTAGGAAAGTAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CAA 90 bp GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATGTCAGAGCTAAGCAGTaGTCATCTCCCTGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: GENQKQATQRKTQKVWVHVRAKQ*SSPWFR
Trigger: CCTGAACCAGGGAGATGACAACTGCTTAGCTCTGAC...ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CAA 90 bp AATATATCAGCCCACGCCAACAACTGGCCATCCTGTCCCACTGTGCTTGGTTTATTTGTGACAACTGCCTaGGGTGAAAATCAGAAGCAA +
Preference number: 5 (lower is better)
Translates to: NISAHANNWPSCPTVLGLFVTTA*GENQKQ
Trigger: TTGCTTCTGATTTTCACCCAAGGCAGTTGTCACAAA...TAAACCAAGCACAGTGGGACAGGATGGCCAGTTGTTGGCGTGGGCTGATATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CAA 90 bp GAGATGATTATTTGCCATCCCCAACCTAGAGATGATCATTTACTGAGTACCTTCGCAAGAGTGTTTGGCTaGTCTTCCATCACCCTGCTT +
Preference number: 5 (lower is better)
Translates to: EMIICHPQPRDDHLLSTFARVFG*SSITLL
Trigger: AAGCAGGGTGATGGAAGACAAGCCAAACACTCTTGC...GAAGGTACTCAGTAAATGATCATCTCTAGGTTGGGGATGGCAAATAATCATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CAA 90 bp CTAGCACTAGATAAGACTGGGGATACAAAGAAAAGATCCCAATCTTGCCCTCAACTTCACCTGACCAGATaGTTCCTCAGAACTCTCAGT +
Preference number: 5 (lower is better)
Translates to: LALDKTGDTKKRSQSCPQLHLTR*FLRTLS
Trigger: ACTGAGAGTTCTGAGGAACAATCTGGTCAGGTGAAG...TTGAGGGCAAGATTGGGATCTTTTCTTTGTATCCCCAGTCTTATCTAGTGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CAA 90 bp TCCATGTTTCCTGAGAATTCACTGTGTATACAGAGGGGCAATAGCTCCTCACCTTGGGTACATTACAGCTaGGGTTTTCCAACTGACTTA +
Preference number: 5 (lower is better)
Translates to: SMFPENSLCIQRGNSSSPWVHYS*GFPTDL
Trigger: TAAGTCAGTTGGAAAACCCAAGCTGTAATGTACCCA...AGGTGAGGAGCTATTGCCCCTCTGTATACACAGTGAATTCTCAGGAAACATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CAA 90 bp AGCCCTACTTTCCTAGCATGCAGCACCCACATAGAGCAGGTATATTTACAAGGTGTACTATCTACCAATTaGCTACTAGCACCACCATTA +
Preference number: 5 (lower is better)
Translates to: SPTFLACSTHIEQVYLQGVLSTN*LLAPPL
Trigger: TAATGGTGGTGCTAGTAGCAAATTGGTAGATAGTAC...ACCTTGTAAATATACCTGCTCTATGTGGGTGCTGCATGCTAGGAAAGTAGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CAA 90 bp TCCATGTTTCCTGAGAATTCACTGTGTATACAGAGGGGCAATAGCTCCTCACCTTCTCCTCAAATTCAGTaGGAGGCATATAAACATGCA +
Preference number: 5 (lower is better)
Translates to: SMFPENSLCIQRGNSSSPSPQIQ*EAYKHA
Trigger: TGCATGTTTATATGCCTCCAACTGAATTTGAGGAGA...AGGTGAGGAGCTATTGCCCCTCTGTATACACAGTGAATTCTCAGGAAACATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CAA 90 bp GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATCCTGTCCCACTGTGCTaGGTTTATACTATACTGACA +
Preference number: 5 (lower is better)
Translates to: GENQKQATQRKTQKVWVHPVPLC*VYTILT
Trigger: TGTCAGTATAGTATAAACCAAGCACAGTGGGACAGG...ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CAA 90 bp AGCCCTACTTTCCTAGCATGCAGCACCCACATAGAGCAGGTATATTTACAAGGTTCAAGACACTTGGAATaGGCAGTTGAGATGATTATT +
Preference number: 5 (lower is better)
Translates to: SPTFLACSTHIEQVYLQGSRHLE*AVEMII
Trigger: AATAATCATCTCAACTGCCAATTCCAAGTGTCTTGA...ACCTTGTAAATATACCTGCTCTATGTGGGTGCTGCATGCTAGGAAAGTAGGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CAA 90 bp GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATGTGTATTCAAGACACTaGGAATTGGCAGTTGAGATG +
Preference number: 5 (lower is better)
Translates to: GENQKQATQRKTQKVWVHVYSRH*ELAVEM
Trigger: CATCTCAACTGCCAATTCCAAGTGTCTTGAATACAC...ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CAA 90 bp ATAGACAAGTTCCTTGTGTTTTCCAACAGGTTTGCTTCAAAATCAATCCTTACACTTTCAGCCAGACACTaGAGGAGGGGCGTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: IDKFLVFSNRFASKSILTLSARH*RRGVLF
Trigger: AAAAAGAACGCCCCTCCTCAAGTGTCTGGCTGAAAG...TGTAAGGATTGATTTTGAAGCAAACCTGTTGGAAAACACAAGGAACTTGTCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CAA 90 bp ATAGACAAGTTCCTTGTGTTTTCCAACAGGTTTGCTTCAAAATCAATCCTTACAACATGCCCTTTGCATTaGTGGCCAACTGATCTACAG +
Preference number: 5 (lower is better)
Translates to: IDKFLVFSNRFASKSILTTCPLH*WPTDLQ
Trigger: CTGTAGATCAGTTGGCCACAAATGCAAAGGGCATGT...TGTAAGGATTGATTTTGAAGCAAACCTGTTGGAAAACACAAGGAACTTGTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CAA 90 bp ATAGACAAGTTCCTTGTGTTTTCCAACAGGTTTGCTTCAAAATCAATCCTTACAGAAAAGATCCCAATCTaGCCCTCAAGGAGCTCAGAT +
Preference number: 5 (lower is better)
Translates to: IDKFLVFSNRFASKSILTEKIPI*PSRSSD
Trigger: ATCTGAGCTCCTTGAGGGCAAGATTGGGATCTTTTC...TGTAAGGATTGATTTTGAAGCAAACCTGTTGGAAAACACAAGGAACTTGTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS-3UTR CAA 90 bp GGTGAAAATCAGAAGCAAGCAACTCAGCGAAAAACTCAGAAGGTTTGGGTACATACAAATTCTAAGATATaGCTCTTCTCTTACCTGCCT +
Preference number: 5 (lower is better)
Translates to: GENQKQATQRKTQKVWVHTNSKI*LFSYLP
Trigger: AGGCAGGTAAGAGAAGAGCAATATCTTAGAATTTGT...ATGTACCCAAACCTTCTGAGTTTTTCGCTGAGTTGCTTGCTTCTGATTTTCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS GCA 72 bp CCACGCCCAGCCGCAAGTAACACTGGAAAACCCGCCTaGGCTGGGAAGACCCTCGCAGCCCGCTCTGCTCCA +
Preference number: 6 (lower is better)
Translates to: PRPAASNTGKPA*AGKTLAARSAP
Trigger: TGGAGCAGAGCGGGCTGCGAGGGTCTTCCCAGCGCAGGCGGGTTTTCCAGTGTTACTTGCGGCTGGGCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS TCA 72 bp AGTCCCCGGGCCACAGCCAGCACCTCTCCAGCTAAGTaGAGGCAGATGGCTTGGGGTGGACTCCGTCTCTTT +
Preference number: 6 (lower is better)
Translates to: SPRATASTSPAK*RQMAWGGLRLF
Trigger: AAAGAGACGGAGTCCACCCCAAGCCATCTGCCTTCACTTAGCTGGAGAGGTGCTGGCTGTGGCCCGGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS GCA 72 bp CACGTCCGCTACAGGTTCGGGGGCTCAGAAACTTTTTaGGGCTTCCTGCCTGCTGCCAGAAAGGCAGCTAGT +
Preference number: 6 (lower is better)
Translates to: HVRYRFGGSETF*GFLPAARKAAS
Trigger: ACTAGCTGCCTTTCTGGCAGCAGGCAGGAAGCCGCAAAAAGTTTCTGAGCCCCCGAACCTGTAGCGGACGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS GCA 72 bp CCAGATAGCTCTGGAGCTCTGATGCCCCTGCACAGTTaGAATCATAGAGCACAGCTGGCTTCAGTCCCCGGG +
Preference number: 6 (lower is better)
Translates to: PDSSGALMPLHS*NHRAQLASVPG
Trigger: CCCGGGGACTGAAGCCAGCTGTGCTCTATGATTGCAACTGTGCAGGGGCATCAGAGCTCCAGAGCTATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS CCA 72 bp AGAATGGCCTCCTTAGCTAGCCCGAGTTCCCTTCCCTaGGTGGCATCTTTCAGCCAGACACTTGAGGAGGGG +
Preference number: 6 (lower is better)
Translates to: RMASLASPSSLP*VASFSQTLEEG
Trigger: CCCCTCCTCAAGTGTCTGGCTGAAAGATGCCACCCAGGGAAGGGAACTCGGGCTAGCTAAGGAGGCCATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS CCA 72 bp CCACAGCCAGCACCTCTCCAGCTAAGTGAAGGCAGATaGCTTGGGGTGGACTCCGTCTCTTTCCCATGCCAA +
Preference number: 6 (lower is better)
Translates to: PQPAPLQLSEGR*LGVDSVSFPCQ
Trigger: TTGGCATGGGAAAGAGACGGAGTCCACCCCAAGCCATCTGCCTTCACTTAGCTGGAGAGGTGCTGGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS TCA 72 bp AAGCCCCTTCAGCTCCTCCAGATAGCTCTGGAGCTCTaGTGCCCCTGCACAGTTGCAATCATAGAGCACAGC +
Preference number: 6 (lower is better)
Translates to: KPLQLLQIALEL*CPCTVAIIEHS
Trigger: GCTGTGCTCTATGATTGCAACTGTGCAGGGGCATCAGAGCTCCAGAGCTATCTGGAGGAGCTGAAGGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS CCA 72 bp GGTGACGCTGGCAGCTGGAAACATCCACAAAGGCTATaGTACCAAGCAGCACCTGCTCCAAGTGCTGACATA +
Preference number: 6 (lower is better)
Translates to: GDAGSWKHPQRL*YQAAPAPSADI
Trigger: TATGTCAGCACTTGGAGCAGGTGCTGCTTGGTACCATAGCCTTTGTGGATGTTTCCAGCTGCCAGCGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS TCA 72 bp CAGCTGCCACCAGCAGCTGAGGGCTCGGTGATGACATaGGATCTAGAAGCAACATCAAGAATGGCCTCCTTA +
Preference number: 6 (lower is better)
Translates to: QLPPAAEGSVMT*DLEATSRMASL
Trigger: TAAGGAGGCCATTCTTGATGTTGCTTCTAGATCTCATGTCATCACCGAGCCCTCAGCTGCTGGTGGCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS TCA 72 bp TTGGGGGTTGACCTAGCAACCATGAGATCCGGGCAGTaGATACTCGTAGTGGAGTCAGAGCTAAGCAGTTGT +
Preference number: 6 (lower is better)
Translates to: LGVDLATMRSGQ*ILVVESELSSC
Trigger: ACAACTGCTTAGCTCTGACTCCACTACGAGTATTCACTGCCCGGATCTCATGGTTGCTAGGTCAACCCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294811.2
CDS GCA 72 bp ATACAGTACACAGATTCCAGTCTGAGGAATGGAGCCTaGTGTAGGAGACTGCTAGAGATAAGTCCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: IQYTDSSLRNGA*CRRLLEISPSA
Trigger: TGCAGAGGGACTTATCTCTAGCAGTCTCCTACAGCAGGCTCCATTCCTCAGACTGGAATCTGTGTACTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294811.2