Pregenerated sensors for C1ORF68 (Homo sapiens)
Ensembl gene IDs: ENSG00000198854Ensembl transcript IDs: ENST00000368775.3
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TGCCAAAGTTTGGGGACTGTACTAACTCTGGCAGGCTGCCTTGGTAGAGAAGCAGGGGTAGCGGGGCAGTaGATTCTGGAGTTGAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: CQSLGTVLTLAGCLGREAGVAGQ*ILELSC Trigger: ACAGCTCAACTCCAGAATGCACTGCCCCGCTACCCC...TGCTTCTCTACCAAGGCAGCCTGCCAGAGTTAGTACAGTCCCCAAACTTTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR GCA 90 bp | ATCACTGGCACTAACAGAGAGGGGGCCAGAAGCTGGTGCATGTTCCAGAAGGGGGCACCATTGCTACCCTaGCCAGCCCCTAGTCCCGAA | + |
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Preference number: 4 (lower is better) Translates to: ITGTNREGARSWCMFQKGAPLLP*PAPSPE Trigger: TTCGGGACTAGGGGCTGGGCAGGGTAGCAATGGTGC...CCCCTTCTGGAACATGCACCAGCTTCTGGCCCCCTCTCTGTTAGTGCCAGTGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR TCA 90 bp | GCTGGTGCATGTTCCAGAAGGGGTAGCGGGGCAGTGCATTCTGGAGTTGAGCTGCTCACAGCAGCCAGATaGTCCTGTGTTGCAGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: AGACSRRGSGAVHSGVELLTAAR*SCVAVL Trigger: CAGAACTGCAACACAGGATCATCTGGCTGCTGTGAG...CAGCTCAACTCCAGAATGCACTGCCCCGCTACCCCTTCTGGAACATGCACCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR CCA 90 bp | GCTGGTGCATGTTCCAGAAGGGGTAGCGGGGCAGTGCATTCTGGAGTTGAGCTGCAGCAGTCATCCTCATaGTCACAGCATGCAGGACCT | + |
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Preference number: 4 (lower is better) Translates to: AGACSRRGSGAVHSGVELQQSSS*SQHAGP Trigger: AGGTCCTGCATGCTGTGACCATGAGGATGACTGCTG...CAGCTCAACTCCAGAATGCACTGCCCCGCTACCCCTTCTGGAACATGCACCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR CCA 90 bp | CATGTTCCAGAAGGGGTAGCGGGGCAGTGCATTCTGGAGTTGAGCTGTCGTATGGGTCTGGCATGGAACTaGGCATTTCACAGAGGCACC | + |
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Preference number: 4 (lower is better) Translates to: HVPEGVAGQCILELSCRMGLAWN*AFHRGT Trigger: GGTGCCTCTGTGAAATGCCCAGTTCCATGCCAGACC...CATACGACAGCTCAACTCCAGAATGCACTGCCCCGCTACCCCTTCTGGAACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR CCA 90 bp | ATCACTGGCACTAACAGAGAGGGGGCCAGAAGCTGGTGCATGTTCCAGAAGGGGGTCACACAGACAGTTTaGGTCTGGCATGGAACTGGG | + |
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Preference number: 4 (lower is better) Translates to: ITGTNREGARSWCMFQKGVTQTV*VWHGTG Trigger: CCCAGTTCCATGCCAGACCCAAACTGTCTGTGTGAC...CCCCTTCTGGAACATGCACCAGCTTCTGGCCCCCTCTCTGTTAGTGCCAGTGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR CCA 90 bp | ATCACTGGCACTAACAGAGAGGGGGCCAGAAGCTGGTGCATGTTCCAGAAGGGGACAGGGAGCAGAGCATaGGTCAGTGACACAGTACTG | + |
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Preference number: 4 (lower is better) Translates to: ITGTNREGARSWCMFQKGTGSRA*VSDTVL Trigger: CAGTACTGTGTCACTGACCCATGCTCTGCTCCCTGT...CCCCTTCTGGAACATGCACCAGCTTCTGGCCCCCTCTCTGTTAGTGCCAGTGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR TCA 90 bp | CATGTTCCAGAAGGGGTAGCGGGGCAGTGCATTCTGGAGTTGAGCTGTCGTATGAGGGAGCTGGACTTTTaGTGTAGGTCATCTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: HVPEGVAGQCILELSCRMRELDF*CRSSGR Trigger: CCTGCCAGATGACCTACATCAAAAGTCCAGCTCCCT...CATACGACAGCTCAACTCCAGAATGCACTGCCCCGCTACCCCTTCTGGAACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR TCA 90 bp | TATTCATGCCAAAGTTTGGGGACTGTACTAACTCTGGCAGGCTGCCTTGGTAGACAGTTCTGGGGCCGCTaGATCCAGCGTCTCAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: YSCQSLGTVLTLAGCLGRQFWGR*IQRLRG Trigger: TCCCCTGAGACGCTGGATTCAGCGGCCCCAGAACTG...TCTACCAAGGCAGCCTGCCAGAGTTAGTACAGTCCCCAAACTTTGGCATGAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR CCA 90 bp | ATCACTGGCACTAACAGAGAGGGGGCCAGAAGCTGGTGCATGTTCCAGAAGGGGGGTCTGGCAGGGAGCTaGACTTTTGATGTAGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: ITGTNREGARSWCMFQKGGLAGS*TFDVGH Trigger: ATGACCTACATCAAAAGTCCAGCTCCCTGCCAGACC...CCCCTTCTGGAACATGCACCAGCTTCTGGCCCCCTCTCTGTTAGTGCCAGTGAT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR CCA 90 bp | TGCCAAAGTTTGGGGACTGTACTAACTCTGGCAGGCTGCCTTGGTAGAGAAGCACCAGACAGCAGTAGCTaGTGGAACAGGGAGCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: CQSLGTVLTLAGCLGREAPDSSS*WNREQS Trigger: GCTCTGCTCCCTGTTCCACCAGCTACTGCTGTCTGG...TGCTTCTCTACCAAGGCAGCCTGCCAGAGTTAGTACAGTCCCCAAACTTTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR TCA 90 bp | AGAGGCAAAGTGATGAGGTTCTACATCACTGGCACTAACAGAGAGGGGGCCAGAACAGTACTGGGAGGTTaGGCCACTTGCAGGAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: RGKVMRFYITGTNREGARTVLGG*ATCRSL Trigger: CAAGCTCCTGCAAGTGGCTCAACCTCCCAGTACTGT...TCTGGCCCCCTCTCTGTTAGTGCCAGTGATGTAGAACCTCATCACTTTGCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR TCA 90 bp | TGCCAAAGTTTGGGGACTGTACTAACTCTGGCAGGCTGCCTTGGTAGAGAAGCACAGAGCATGGGTCAGTaGCACAGTACTGGGAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: CQSLGTVLTLAGCLGREAQSMGQ*HSTGRL Trigger: CAACCTCCCAGTACTGTGTCACTGACCCATGCTCTG...TGCTTCTCTACCAAGGCAGCCTGCCAGAGTTAGTACAGTCCCCAAACTTTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR GCA 90 bp | GCTTTATTCATGCCAAAGTTTGGGGACTGTACTAACTCTGGCAGGCTGCCTTGGGGGGTAGCGGGGCAGTaGATTCTGGAGTTGAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: ALFMPKFGDCTNSGRLPWGVAGQ*ILELSC Trigger: ACAGCTCAACTCCAGAATGCACTGCCCCGCTACCCC...CCAAGGCAGCCTGCCAGAGTTAGTACAGTCCCCAAACTTTGGCATGAATAAAGC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR TCA 90 bp | CTGGTGCATGTTCCAGAAGGGGTAGCGGGGCAGTGCATTCTGGAGTTGAGCTGTAGTGCATTCTGGAGTTaGGCTGTCGTATGTTTAGCA | + |
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Preference number: 4 (lower is better) Translates to: LVHVPEGVAGQCILELSCSAFWS*AVVCLA Trigger: TGCTAAACATACGACAGCTCAACTCCAGAATGCACT...ACAGCTCAACTCCAGAATGCACTGCCCCGCTACCCCTTCTGGAACATGCACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR GCA 90 bp | TATTCATGCCAAAGTTTGGGGACTGTACTAACTCTGGCAGGCTGCCTTGGTAGATCACAGAGGCACCATTaGTACCCTGCCCAGCCCCTA | + |
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Preference number: 4 (lower is better) Translates to: YSCQSLGTVLTLAGCLGRSQRHH*YPAQPL Trigger: TAGGGGCTGGGCAGGGTAGCAATGGTGCCTCTGTGA...TCTACCAAGGCAGCCTGCCAGAGTTAGTACAGTCCCCAAACTTTGGCATGAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR CCA 90 bp | AGAGGCAAAGTGATGAGGTTCTACATCACTGGCACTAACAGAGAGGGGGCCAGAAGTTTGAGTAGGGCATaGAGCAGGGCCTGTCACACA | + |
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Preference number: 4 (lower is better) Translates to: RGKVMRFYITGTNREGARSLSRA*SRACHT Trigger: TGTGTGACAGGCCCTGCTCCATGCCCTACTCAAACT...TCTGGCCCCCTCTCTGTTAGTGCCAGTGATGTAGAACCTCATCACTTTGCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR GCA 90 bp | TATTCATGCCAAAGTTTGGGGACTGTACTAACTCTGGCAGGCTGCCTTGGTAGACTCATGGTCACAGCATaGAGGACCTCGGGACCTCAT | + |
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Preference number: 4 (lower is better) Translates to: YSCQSLGTVLTLAGCLGRLMVTA*RTSGPH Trigger: ATGAGGTCCCGAGGTCCTGCATGCTGTGACCATGAG...TCTACCAAGGCAGCCTGCCAGAGTTAGTACAGTCCCCAAACTTTGGCATGAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR CCA 90 bp | CTGGTGCATGTTCCAGAAGGGGTAGCGGGGCAGTGCATTCTGGAGTTGAGCTGTGGTTTGAGTCTGGCATaGAACTTGGTACTTCACATA | + |
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Preference number: 4 (lower is better) Translates to: LVHVPEGVAGQCILELSCGLSLA*NLVLHI Trigger: TATGTGAAGTACCAAGTTCCATGCCAGACTCAAACC...ACAGCTCAACTCCAGAATGCACTGCCCCGCTACCCCTTCTGGAACATGCACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR CCA 90 bp | TGCCAAAGTTTGGGGACTGTACTAACTCTGGCAGGCTGCCTTGGTAGAGAAGCAACCTTTCACACAAGATaGAGGGAACTGTGGCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: CQSLGTVLTLAGCLGREATFHTR*RELWLL Trigger: AAGCAGCCACAGTTCCCTCCATCTTGTGTGAAAGGT...TGCTTCTCTACCAAGGCAGCCTGCCAGAGTTAGTACAGTCCCCAAACTTTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR CCA 90 bp | TATTCATGCCAAAGTTTGGGGACTGTACTAACTCTGGCAGGCTGCCTTGGTAGATCAGTGACACAGTACTaGGAGGTTGAGCCACTTGCA | + |
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Preference number: 4 (lower is better) Translates to: YSCQSLGTVLTLAGCLGRSVTQY*EVEPLA Trigger: TGCAAGTGGCTCAACCTCCCAGTACTGTGTCACTGA...TCTACCAAGGCAGCCTGCCAGAGTTAGTACAGTCCCCAAACTTTGGCATGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR GCA 90 bp | GCTTTATTCATGCCAAAGTTTGGGGACTGTACTAACTCTGGCAGGCTGCCTTGGTCAGAGCTTTATTCATaGCAAAGTTTGGGGACTGTA | + |
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Preference number: 4 (lower is better) Translates to: ALFMPKFGDCTNSGRLPWSELYS*QSLGTV Trigger: TACAGTCCCCAAACTTTGGCATGAATAAAGCTCTGA...CCAAGGCAGCCTGCCAGAGTTAGTACAGTCCCCAAACTTTGGCATGAATAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS CCA 90 bp | AGGGCATGGAGCAGGGCCTGTCACACAGACAGTTTGGGTCTGGCATaGAACTGGGCATTTCACAGAGGCACCATTGCTACCCTGCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: RAWSRACHTDSLGLA*NWAFHRGTIATLPS Trigger: GCTGGGCAGGGTAGCAATGGTGCCTCTGTGAAATGCCCAGTTCCATGCCAGACCCAAACTGTCTGTGTGACAGGCCCTGCTCCATGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS GCA 90 bp | GTCTGGCATGGAACTGGGCATTTCACAGAGGCACCATTGCTACCCTaGCCAGCCCCTAGTCCCGAACCTTTCACACAAGATGGAGGGAAC | + |
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Preference number: 5 (lower is better) Translates to: VWHGTGHFTEAPLLP*PAPSPEPFTQDGGN Trigger: GTTCCCTCCATCTTGTGTGAAAGGTTCGGGACTAGGGGCTGGGCAGGGTAGCAATGGTGCCTCTGTGAAATGCCCAGTTCCATGCCAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS TCA 90 bp | CCAGACAGCAGTAGCTGGTGGAACAGGGAGCAGAGCATGGGTCAGTaGCACAGTACTGGGAGGTTGAGCCACTTGCAGGAGCTTGAACAT | + |
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Preference number: 5 (lower is better) Translates to: PDSSSWWNREQSMGQ*HSTGRLSHLQELEH Trigger: ATGTTCAAGCTCCTGCAAGTGGCTCAACCTCCCAGTACTGTGTCACTGACCCATGCTCTGCTCCCTGTTCCACCAGCTACTGCTGTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS TCA 90 bp | AGAACCACAGCATCCAGAGCTTCCCGAATTCTCACAGCAGCCAGATaGTCCTGTGTTGCAGTTCTGGGGCCGCTGAATCCAGCGTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: RTTASRASRILTAAR*SCVAVLGPLNPASQ Trigger: CTGAGACGCTGGATTCAGCGGCCCCAGAACTGCAACACAGGATCATCTGGCTGCTGTGAGAATTCGGGAAGCTCTGGATGCTGTGGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR CAA 90 bp | ATCACTGGCACTAACAGAGAGGGGGCCAGAAGCTGGTGCATGTTCCAGAAGGGGGCACTTCACGTAGGTTaGGCAGGGAGTTGGGCATTT | + |
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Preference number: 5 (lower is better) Translates to: ITGTNREGARSWCMFQKGALHVG*AGSWAF Trigger: AAATGCCCAACTCCCTGCCAAACCTACGTGAAGTGC...CCCCTTCTGGAACATGCACCAGCTTCTGGCCCCCTCTCTGTTAGTGCCAGTGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR CAA 90 bp | CATGTTCCAGAAGGGGTAGCGGGGCAGTGCATTCTGGAGTTGAGCTGTCGTATGCACAGTACTGGGAGGTaGAGCCACTTGCAGGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: HVPEGVAGQCILELSCRMHSTGR*SHLQEL Trigger: AAGCTCCTGCAAGTGGCTCAACCTCCCAGTACTGTG...CATACGACAGCTCAACTCCAGAATGCACTGCCCCGCTACCCCTTCTGGAACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR CAA 90 bp | CTGGTGCATGTTCCAGAAGGGGTAGCGGGGCAGTGCATTCTGGAGTTGAGCTGTGGGAGGTTGAGCCACTaGCAGGAGCTTGAACATAAT | + |
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Preference number: 5 (lower is better) Translates to: LVHVPEGVAGQCILELSCGRLSH*QELEHN Trigger: ATTATGTTCAAGCTCCTGCAAGTGGCTCAACCTCCC...ACAGCTCAACTCCAGAATGCACTGCCCCGCTACCCCTTCTGGAACATGCACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR CAA 90 bp | GCTGGTGCATGTTCCAGAAGGGGTAGCGGGGCAGTGCATTCTGGAGTTGAGCTGCAGTGCATTCTGGAGTaGAGCTGTCGTATGTTTAGC | + |
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Preference number: 5 (lower is better) Translates to: AGACSRRGSGAVHSGVELQCILE*SCRMFS Trigger: GCTAAACATACGACAGCTCAACTCCAGAATGCACTG...CAGCTCAACTCCAGAATGCACTGCCCCGCTACCCCTTCTGGAACATGCACCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS TCA 90 bp | GGAACAGGGAGCAGAGCATGGGTCAGTGACACAGTACTGGGAGGTTaGGCCACTTGCAGGAGCTTGAACATAATAGCTCTGGCAAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: GTGSRAWVSDTVLGG*ATCRSLNIIALARR Trigger: TCTCCTTGCCAGAGCTATTATGTTCAAGCTCCTGCAAGTGGCTCAACCTCCCAGTACTGTGTCACTGACCCATGCTCTGCTCCCTGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR CAA 90 bp | TATTCATGCCAAAGTTTGGGGACTGTACTAACTCTGGCAGGCTGCCTTGGTAGATTCACAGAGGCACCATaGCTACCCTGCCCAGCCCCT | + |
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Preference number: 5 (lower is better) Translates to: YSCQSLGTVLTLAGCLGRFTEAP*LPCPAP Trigger: AGGGGCTGGGCAGGGTAGCAATGGTGCCTCTGTGAA...TCTACCAAGGCAGCCTGCCAGAGTTAGTACAGTCCCCAAACTTTGGCATGAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS CCA 90 bp | AGTCTGGCATGGAACTTGGTACTTCACATAAGTTTGAGTAGGGCATaGAGCAGGGCCTGTCACACAGACAGTTTGGGTCTGGCATGGAAC | + |
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Preference number: 5 (lower is better) Translates to: SLAWNLVLHISLSRA*SRACHTDSLGLAWN Trigger: GTTCCATGCCAGACCCAAACTGTCTGTGTGACAGGCCCTGCTCCATGCCCTACTCAAACTTATGTGAAGTACCAAGTTCCATGCCAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR CAA 90 bp | AGAGGCAAAGTGATGAGGTTCTACATCACTGGCACTAACAGAGAGGGGGCCAGAGCACTTCACGTAGGTTaGAGTCTGGCATGGAACTTG | + |
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Preference number: 5 (lower is better) Translates to: RGKVMRFYITGTNREGARALHVG*SLAWNL Trigger: CAAGTTCCATGCCAGACTCAAACCTACGTGAAGTGC...TCTGGCCCCCTCTCTGTTAGTGCCAGTGATGTAGAACCTCATCACTTTGCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR CAA 90 bp | CTGGTGCATGTTCCAGAAGGGGTAGCGGGGCAGTGCATTCTGGAGTTGAGCTGTTATTCATGCCAAAGTTaGGGGACTGTACTAACTCTG | + |
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Preference number: 5 (lower is better) Translates to: LVHVPEGVAGQCILELSCYSCQS*GTVLTL Trigger: CAGAGTTAGTACAGTCCCCAAACTTTGGCATGAATA...ACAGCTCAACTCCAGAATGCACTGCCCCGCTACCCCTTCTGGAACATGCACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR CAA 90 bp | TATTCATGCCAAAGTTTGGGGACTGTACTAACTCTGGCAGGCTGCCTTGGTAGATGTCACACAGACAGTTaGGGTCTGGCATGGAACTGG | + |
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Preference number: 5 (lower is better) Translates to: YSCQSLGTVLTLAGCLGRCHTDS*GLAWNW Trigger: CCAGTTCCATGCCAGACCCAAACTGTCTGTGTGACA...TCTACCAAGGCAGCCTGCCAGAGTTAGTACAGTCCCCAAACTTTGGCATGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR CAA 90 bp | TGCCAAAGTTTGGGGACTGTACTAACTCTGGCAGGCTGCCTTGGTAGAGAAGCAGTACTTCACATAAGTTaGAGTAGGGCATGGAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: CQSLGTVLTLAGCLGREAVLHIS*SRAWSR Trigger: CCTGCTCCATGCCCTACTCAAACTTATGTGAAGTAC...TGCTTCTCTACCAAGGCAGCCTGCCAGAGTTAGTACAGTCCCCAAACTTTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR CAA 90 bp | GCTTTATTCATGCCAAAGTTTGGGGACTGTACTAACTCTGGCAGGCTGCCTTGGGCCACTTGCAGGAGCTaGAACATAATAGCTCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: ALFMPKFGDCTNSGRLPWATCRS*NIIALA Trigger: TGCCAGAGCTATTATGTTCAAGCTCCTGCAAGTGGC...CCAAGGCAGCCTGCCAGAGTTAGTACAGTCCCCAAACTTTGGCATGAATAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR CAA 90 bp | GCTTTATTCATGCCAAAGTTTGGGGACTGTACTAACTCTGGCAGGCTGCCTTGGGCACTTCACATAGGTTaGGCAGGGTGTTGGGTATTT | + |
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Preference number: 5 (lower is better) Translates to: ALFMPKFGDCTNSGRLPWALHIG*AGCWVF Trigger: AAATACCCAACACCCTGCCAAACCTATGTGAAGTGC...CCAAGGCAGCCTGCCAGAGTTAGTACAGTCCCCAAACTTTGGCATGAATAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS-3UTR CAA 90 bp | GCTTTATTCATGCCAAAGTTTGGGGACTGTACTAACTCTGGCAGGCTGCCTTGGAGTCTGGCATGGAACTaGGTACTTCACATAAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: ALFMPKFGDCTNSGRLPWSLAWN*VLHISL Trigger: CAAACTTATGTGAAGTACCAAGTTCCATGCCAGACT...CCAAGGCAGCCTGCCAGAGTTAGTACAGTCCCCAAACTTTGGCATGAATAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS TCA 72 bp | AGTAGCTGGTGGAACAGGGAGCAGAGCATGGGTCAGTaGCACAGTACTGGGAGGTTGAGCCACTTGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: SSWWNREQSMGQ*HSTGRLSHLQE Trigger: CTCCTGCAAGTGGCTCAACCTCCCAGTACTGTGTCACTGACCCATGCTCTGCTCCCTGTTCCACCAGCTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS GCA 72 bp | GGAACTGGGCATTTCACAGAGGCACCATTGCTACCCTaGCCAGCCCCTAGTCCCGAACCTTTCACACAAGAT | + |
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Preference number: 6 (lower is better) Translates to: GTGHFTEAPLLP*PAPSPEPFTQD Trigger: ATCTTGTGTGAAAGGTTCGGGACTAGGGGCTGGGCAGGGTAGCAATGGTGCCTCTGTGAAATGCCCAGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS CCA 72 bp | AGCAGGGCCTGTCACACAGACAGTTTGGGTCTGGCATaGAACTGGGCATTTCACAGAGGCACCATTGCTACC | + |
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Preference number: 6 (lower is better) Translates to: SRACHTDSLGLA*NWAFHRGTIAT Trigger: GGTAGCAATGGTGCCTCTGTGAAATGCCCAGTTCCATGCCAGACCCAAACTGTCTGTGTGACAGGCCCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS CCA 72 bp | CATGGAGCAGGGCCTGTCACACAGACAGTTTGGGTCTaGCATGGAACTGGGCATTTCACAGAGGCACCATTG | + |
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Preference number: 6 (lower is better) Translates to: HGAGPVTQTVWV*HGTGHFTEAPL Trigger: CAATGGTGCCTCTGTGAAATGCCCAGTTCCATGCCAGACCCAAACTGTCTGTGTGACAGGCCCTGCTCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS GCA 72 bp | TGTTTAGCAGCAGCAGTCATCCTCATGGTCACAGCATaGAGGACCTCGGGACCTCATGGGGATAATTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: CLAAAVILMVTA*RTSGPHGDNSQ Trigger: TTGGGAATTATCCCCATGAGGTCCCGAGGTCCTGCATGCTGTGACCATGAGGATGACTGCTGCTGCTAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS TCA 72 bp | AGCAGAGCATGGGTCAGTGACACAGTACTGGGAGGTTaGGCCACTTGCAGGAGCTTGAACATAATAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SRAWVSDTVLGG*ATCRSLNIIAL Trigger: CAGAGCTATTATGTTCAAGCTCCTGCAAGTGGCTCAACCTCCCAGTACTGTGTCACTGACCCATGCTCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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| CDS CCA 72 bp | TGGAACTTGGTACTTCACATAAGTTTGAGTAGGGCATaGAGCAGGGCCTGTCACACAGACAGTTTGGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: WNLVLHISLSRA*SRACHTDSLGL Trigger: CAGACCCAAACTGTCTGTGTGACAGGCCCTGCTCCATGCCCTACTCAAACTTATGTGAAGTACCAAGTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368775.3 |
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