RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C1ORF43 (Homo sapiens)

Ensembl gene IDs: ENSG00000143612

Ensembl transcript IDs: ENST00000350592.7, ENST00000362076.8, ENST00000368516.1, ENST00000368518.5, ENST00000368519.5, ENST00000368521.10, ENST00000470180.2, ENST00000640799.1, ENST00000648267.1

Found 607 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTaGGCCAGATGTTCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGC +
Preference number: 1 (lower is better)
Translates to: TLDTTGTWMDTVWAC*ARCSEGGPASSLSC
Trigger: GCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR GCA 90 bp AGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTaGTGGGCCAGATGTTCCGAGGGCGGCCCGGCAAGCAGCCTGTCT +
Preference number: 1 (lower is better)
Translates to: RTLDTTGTWMDTVWA*WARCSEGGPASSLS
Trigger: AGACAGGCTGCTTGCCGGGCCGCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR CCA 90 bp CGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTaGCTTAATCTACGGCAAGAGTCCTTCAGCTCCGTCACAGAGTAC +
Preference number: 1 (lower is better)
Translates to: RGRPGKQPVLHIATD*LNLRQESFSSVTEY
Trigger: GTACTCTGTGACGGAGCTGAAGGACTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR GCA 90 bp CCCATAGCGGGCTGTTTCATAGCCATCCAAAAGGGTATCAATGAGTaGTTTGCGTACACCCTTGAAAGGCGTACTAGTGTTTCGCAGATC +
Preference number: 1 (lower is better)
Translates to: PIAGCFIAIQKGINE*FAYTLERRTSVSQI
Trigger: GATCTGCGAAACACTAGTACGCCTTTCAAGGGTGTACGCAAAGCACTCATTGATACCCTTTTGGATGGCTATGAAACAGCCCGCTATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
3UTR GCA 90 bp CCACATTCACCAACTTCCCCACTTGACCTCCCACCAGTTCCTGTCTaGTTTTTCCATCAATCAACTCTAAGATGCCCTAAACCCAAACAG +
Preference number: 1 (lower is better)
Translates to: PHSPTSPLDLPPVPV*FFHQSTLRCPKPKQ
Trigger: CTGTTTGGGTTTAGGGCATCTTAGAGTTGATTGATGGAAAAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTGAATGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR TCA 90 bp TGGAGCACAAAGGTAAGTTATTCCACATTCACCAACTTCCCCACTTaGCCTCCCACCAGTTCCTGTCTGCTTTTTCCATCAATCAACTCT +
Preference number: 1 (lower is better)
Translates to: WSTKVSYSTFTNFPT*PPTSSCLLFPSINS
Trigger: AGAGTTGATTGATGGAAAAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTGAATGTGGAATAACTTACCTTTGTGCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR TCA 90 bp GTGAACCACTGTGCCCGGCCGCATCTGCTTTCTAATGTAAGAGACTaGTCTAATAGTCTAGAACCTGACAACTCTTATGGTATCATGGAT +
Preference number: 1 (lower is better)
Translates to: VNHCARPHLLSNVRD*SNSLEPDNSYGIMD
Trigger: ATCCATGATACCATAAGAGTTGTCAGGTTCTAGACTATTAGATCAGTCTCTTACATTAGAAAGCAGATGCGGCCGGGCACAGTGGTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
3UTR GCA 90 bp CTCCCACCAGTTCCTGTCTGCTTTTTCCATCAATCAACTCTAAGATaGCCTAAACCCAAACAGTTCCCATTCAACTGTGCACAAAGGTAT +
Preference number: 1 (lower is better)
Translates to: LPPVPVCFFHQSTLR*PKPKQFPFNCAQRY
Trigger: ATACCTTTGTGCACAGTTGAATGGGAACTGTTTGGGTTTAGGGCATCTTAGAGTTGATTGATGGAAAAAGCAGACAGGAACTGGTGGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR CCA 90 bp GTAGATCCTTGCATGTCAGGAAAGCTGCAACACATCTGGTTTAAGTaGAGCACAAAGGTAAGTTATTCCACATTCACCAACTTCCCCACT +
Preference number: 1 (lower is better)
Translates to: VDPCMSGKLQHIWFK*STKVSYSTFTNFPT
Trigger: AGTGGGGAAGTTGGTGAATGTGGAATAACTTACCTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTTTCCTGACATGCAAGGATCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR CCA 90 bp GTATCATGGATTTTGTTTATATGCTTTATGAAGGTCACTGCACTGTaGCAACAGTCCAACACTACTGTACCAGCTCCCTCTGACACGTTC +
Preference number: 1 (lower is better)
Translates to: VSWILFICFMKVTAL*QQSNTTVPAPSDTF
Trigger: GAACGTGTCAGAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAAAATCCATGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
3UTR CCA 90 bp GGAATTAAAGTAGATCCTTGCATGTCAGGAAAGCTGCAACACATCTaGTTTAAGTGGAGCACAAAGGTAAGTTATTCCACATTCACCAAC +
Preference number: 1 (lower is better)
Translates to: GIKVDPCMSGKLQHI*FKWSTKVSYSTFTN
Trigger: GTTGGTGAATGTGGAATAACTTACCTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTTTCCTGACATGCAAGGATCTACTTTAATTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp CGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATACAGTCTGGGCCTGCTaGGCCAGATGTTCCGAGGGC +
Preference number: 2 (lower is better)
Translates to: RGRPGKQPVLHIATDWLNTVWAC*ARCSEG
Trigger: GCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGT...ATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CCA 90 bp GGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCACAGTCTGGGCCTGCTaGGCCAGATGTTCCGAGGGC +
Preference number: 2 (lower is better)
Translates to: GPASSLSCTLQLTGLIYGTVWAC*ARCSEG
Trigger: GCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGT...GCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR CAA 90 bp GCCAGATGTTCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATaGCAACTGACTGGCTTAATCTACGGCAAGAGTCCTTCAGCTCCG +
Preference number: 2 (lower is better)
Translates to: ARCSEGGPASSLSCT*QLTGLIYGKSPSAP
Trigger: CGGAGCTGAAGGACTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGAACATCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CCA 90 bp GGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCACAGTCTGGGCCTGCTaGGCCAGATGTTCCGAGGGC +
Preference number: 2 (lower is better)
Translates to: GYNGNLDGYSLGLLGQMFTVWAC*ARCSEG
Trigger: GCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGT...GAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR TCA 90 bp CGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATGAGACCTCAGGGGACTaGGTTAGGTCTTTGGCTGCT +
Preference number: 2 (lower is better)
Translates to: RGRPGKQPVLHIATDWLNETSGD*VRSLAA
Trigger: AGCAGCCAAAGACCTAACTCAGTCCCCTGAGGTCTC...ATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR GCA 90 bp ACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGCGCAAGCAGCCTGTCTTaGACATTGCAACTGACTGGC +
Preference number: 2 (lower is better)
Translates to: TGTWMDTVWACWARCSEGASSLS*TLQLTG
Trigger: GCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGC...GCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR GCA 90 bp GGATGGTTGTTGGGGAGACCTCAGGGGACTGAGTTAGGTCTTTGGCTGCTGACTGATACAGTCTGGGCCTaGTGGGCCAGATGTTCCGAG +
Preference number: 2 (lower is better)
Translates to: GWLLGRPQGTELGLWLLTDTVWA*WARCSE
Trigger: CTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATC...AGTCAGCAGCCAAAGACCTAACTCAGTCCCCTGAGGTCTCCCCAACAACCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR GCA 90 bp CGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATAGAGCTCCCAATTCGTaGTTTAACCGCAGTGGCCAG +
Preference number: 2 (lower is better)
Translates to: RGRPGKQPVLHIATDWLNRAPNS*FNRSGQ
Trigger: CTGGCCACTGCGGTTAAAGCACGAATTGGGAGCTCT...ATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp CCACATTCACCAACTTCCCCACTTGACCTCCCACCAGTTCCTGTCTGCTTTTTCACAGTCTGGGCCTGCTaGGCCAGATGTTCCGAGGGC +
Preference number: 2 (lower is better)
Translates to: PHSPTSPLDLPPVPVCFFTVWAC*ARCSEG
Trigger: GCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGT...GAAAAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTGAATGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp GGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCTGGATGGATACAGTCTaGGCCTGCTGGGCCAGATGT +
Preference number: 2 (lower is better)
Translates to: GPASSLSCTLQLTGLIYGWMDTV*ACWARC
Trigger: ACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCA...GCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR TCA 90 bp AACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGTGCCGGCCTTCAGAATaGAATGGGATCTCAGAGGTA +
Preference number: 2 (lower is better)
Translates to: NGNLDGYSLGLLGQMFRGCRPSE*NGISEV
Trigger: TACCTCTGAGATCCCATTTCATTCTGAAGGCCGGCA...CCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648267.1
3UTR-3UTR CCA 90 bp GGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCGGTATGTCACCTGGATaGTTGTTGGGGAGACCTCAG +
Preference number: 2 (lower is better)
Translates to: GPASSLSCTLQLTGLIYGGMSPG*LLGRPQ
Trigger: CTGAGGTCTCCCCAACAACCATCCAGGTGACATACC...GCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CCA 90 bp ACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGCGTTTACTCTTCTGACTaGAGGGGAGGTATGTCACCT +
Preference number: 2 (lower is better)
Translates to: TGTWMDTVWACWARCSEGVYSSD*RGGMSP
Trigger: AGGTGACATACCTCCCCTCCAGTCAGAAGAGTAAAC...GCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR GCA 90 bp AGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCGCAAGCAGCCTGTCTTaGACATTGCAACTGACTGGC +
Preference number: 2 (lower is better)
Translates to: RTLDTTGTWMDTVWACWAASSLS*TLQLTG
Trigger: GCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGC...GGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CCA 90 bp CCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGTGGATGGATACAGTCTaGGCCTGCTGGGCCAGATGT +
Preference number: 2 (lower is better)
Translates to: PASSLSCTLQLTGLIYGKWMDTV*ACWARC
Trigger: ACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCA...CTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CCA 90 bp TACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGACAACGGGAACTTGGATaGATACAGTCTGGGCCTGCT +
Preference number: 2 (lower is better)
Translates to: YNGNLDGYSLGLLGQMFRQRELG*IQSGPA
Trigger: AGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTG...TCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CCA 90 bp ATGTTGGTCAGGCTGGTCTCGGATTCCCAACCTCAGATGATCCTCCCGCCTCGGAAGGTCACTGCACTGTaGCAACAGTCCAACACTACT +
Preference number: 2 (lower is better)
Translates to: MLVRLVSDSQPQMILPPRKVTAL*QQSNTT
Trigger: AGTAGTGTTGGACTGTTGCCACAGTGCAGTGACCTT...CCGAGGCGGGAGGATCATCTGAGGTTGGGAATCCGAGACCAGCCTGACCAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368518.5
3UTR-3UTR CCA 90 bp CCACATTCACCAACTTCCCCACTTGACCTCCCACCAGTTCCTGTCTGCTTTTTCTGGATGGATACAGTCTaGGCCTGCTGGGCCAGATGT +
Preference number: 2 (lower is better)
Translates to: PHSPTSPLDLPPVPVCFFWMDTV*ACWARC
Trigger: ACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCA...GAAAAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTGAATGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp GGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCGATACAACGGGAACTTaGATGGATACAGTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: GYNGNLDGYSLGLLGQMFDTTGT*MDTVWA
Trigger: GGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATC...GAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR CAA 90 bp TACCCTTTAGACACAAGCTCTAAGAACTCTGGATACAACGGGAACTaGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGG +
Preference number: 2 (lower is better)
Translates to: YPLDTSSKNSGYNGN*DGYSLGLLGQMFRG
Trigger: CCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGTCTAAAGGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR TCA 90 bp ATTCCACATTCACCAACTTCCCCACTTGACCTCCCACCAGTTCCTGTCTGCTTTACCAACTTCCCCACTTaGCCTCCCACCAGTTCCTGT +
Preference number: 2 (lower is better)
Translates to: IPHSPTSPLDLPPVPVCFTNFPT*PPTSSC
Trigger: ACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGT...AAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTGAATGTGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR TCA 90 bp GGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCTGCCGGCCTTCAGAATaGAATGGGATCTCTGTAATC +
Preference number: 2 (lower is better)
Translates to: GYNGNLDGYSLGLLGQMFCRPSE*NGISVI
Trigger: GATTACAGAGATCCCATTTCATTCTGAAGGCCGGCA...GAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470180.2
3UTR-3UTR TCA 90 bp CAACTGACTGGCTTAATCTACGGCAAGAGTCCTTCAGCTCCGTCACAGAGTACTGAGACCTCAGGGGACTaGGTTAGGTCTTTGGCTGCT +
Preference number: 2 (lower is better)
Translates to: QLTGLIYGKSPSAPSQSTETSGD*VRSLAA
Trigger: AGCAGCCAAAGACCTAACTCAGTCCCCTGAGGTCTC...AGTACTCTGTGACGGAGCTGAAGGACTCTTGCCGTAGATTAAGCCAGTCAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR GCA 90 bp GAAGTGCTTGGCACGTTTACTCTTCTGACTGGAGGGGAGGTATGTCACCTGGATGCAAGCAGCCTGTCTTaGACATTGCAACTGACTGGC +
Preference number: 2 (lower is better)
Translates to: EVLGTFTLLTGGEVCHLDASSLS*TLQLTG
Trigger: GCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGC...ATCCAGGTGACATACCTCCCCTCCAGTCAGAAGAGTAAACGTGCCAAGCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR GCA 90 bp AGACCTCAGGGGACTGAGTTAGGTCTTTGGCTGCTGACTGGTGATGTCGCTGAGAGGAGCGGAAATTCTTaGCCATTAAGGAACGGGGAT +
Preference number: 2 (lower is better)
Translates to: RPQGTELGLWLLTGDVAERSGNS*PLRNGD
Trigger: ATCCCCGTTCCTTAATGGGCAAGAATTTCCGCTCCT...CTCAGCGACATCACCAGTCAGCAGCCAAAGACCTAACTCAGTCCCCTGAGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR GCA 90 bp CAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGTTCAATTCAAGGAAGTaGTTGGCACGTTTACTCTTC +
Preference number: 2 (lower is better)
Translates to: QRELGWIQSGPAGPDVPRFNSRK*LARLLF
Trigger: GAAGAGTAAACGTGCCAAGCACTTCCTTGAATTGAA...CCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CCA 90 bp GGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCACATTGCAACTGACTaGCTTAATCTACGGCAAGAG +
Preference number: 2 (lower is better)
Translates to: GYNGNLDGYSLGLLGQMFHIATD*LNLRQE
Trigger: CTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTG...GAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR TCA 90 bp CGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATAAGGTGAACTATGGCTaGAACCAAGTGAAGATTTTT +
Preference number: 2 (lower is better)
Translates to: RGRPGKQPVLHIATDWLNKVNYG*NQVKIF
Trigger: AAAAATCTTCACTTGGTTTCAGCCATAGTTCACCTT...ATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR GCA 90 bp GAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCACCACCAGTTCCTGTCTaGTTTTTCCATCAATCAACT +
Preference number: 2 (lower is better)
Translates to: ELWIQRELGWIQSGPAGPPPVPV*FFHQST
Trigger: AGTTGATTGATGGAAAAAGCAGACAGGAACTGGTGG...TGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR GCA 90 bp AGACCTCAGGGGACTGAGTTAGGTCTTTGGCTGCTGACTGGTGATGTCGCTGAGAAGGGTATCAATGAGTaGTTTGCGTACACCCTTGAA +
Preference number: 2 (lower is better)
Translates to: RPQGTELGLWLLTGDVAEKGINE*FAYTLE
Trigger: TTCAAGGGTGTACGCAAAGCACTCATTGATACCCTT...CTCAGCGACATCACCAGTCAGCAGCCAAAGACCTAACTCAGTCCCCTGAGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp GGAATTAAAGTAGATCCTTGCATGTCAGGAAAGCTGCAACACATCTGGTTTAAGACAGTCTGGGCCTGCTaGGCCAGATGTTCCGAGGGC +
Preference number: 2 (lower is better)
Translates to: GIKVDPCMSGKLQHIWFKTVWAC*ARCSEG
Trigger: GCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGT...CTTAAACCAGATGTGTTGCAGCTTTCCTGACATGCAAGGATCTACTTTAATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp CAACACATCTGGTTTAAGTGGAGCACAAAGGTAAGTTATTCCACATTCACCAACACAGTCTGGGCCTGCTaGGCCAGATGTTCCGAGGGC +
Preference number: 2 (lower is better)
Translates to: QHIWFKWSTKVSYSTFTNTVWAC*ARCSEG
Trigger: GCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGT...GTTGGTGAATGTGGAATAACTTACCTTTGTGCTCCACTTAAACCAGATGTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp GTCTTAGCCAATGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACCCTTACAGTCTGGGCCTGCTaGGCCAGATGTTCCGAGGGC +
Preference number: 2 (lower is better)
Translates to: VLANVLKMLIRKGWGITLTVWAC*ARCSEG
Trigger: GCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGT...AAGGGTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACATTGGCTAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CCA 90 bp GAAGTGCTTGGCACGTTTACTCTTCTGACTGGAGGGGAGGTATGTCACCTGGATGTTTACTCTTCTGACTaGAGGGGAGGTATGTCACCT +
Preference number: 2 (lower is better)
Translates to: EVLGTFTLLTGGEVCHLDVYSSD*RGGMSP
Trigger: AGGTGACATACCTCCCCTCCAGTCAGAAGAGTAAAC...ATCCAGGTGACATACCTCCCCTCCAGTCAGAAGAGTAAACGTGCCAAGCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CCA 90 bp AGACCTCAGGGGACTGAGTTAGGTCTTTGGCTGCTGACTGGTGATGTCGCTGAGATTCAAGGAAGTGCTTaGCACGTTTACTCTTCTGAC +
Preference number: 2 (lower is better)
Translates to: RPQGTELGLWLLTGDVAEIQGSA*HVYSSD
Trigger: GTCAGAAGAGTAAACGTGCCAAGCACTTCCTTGAAT...CTCAGCGACATCACCAGTCAGCAGCCAAAGACCTAACTCAGTCCCCTGAGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR TCA 90 bp ATAGCCATCCAAAAGGGTATCAATGAGTGCTTTGCGTACACCCTTGAAAGGCGTGCTGGGGCTCATACTTaGTATCCTGAACCCTGGAGA +
Preference number: 2 (lower is better)
Translates to: IAIQKGINECFAYTLERRAGAHT*YPEPWR
Trigger: TCTCCAGGGTTCAGGATATCAAGTATGAGCCCCAGC...ACGCCTTTCAAGGGTGTACGCAAAGCACTCATTGATACCCTTTTGGATGGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648267.1
3UTR-3UTR GCA 90 bp TGGTTTAAGTGGAGCACAAAGGTAAGTTATTCCACATTCACCAACTTCCCCACTGATACAGTCTGGGCCTaGTGGGCCAGATGTTCCGAG +
Preference number: 2 (lower is better)
Translates to: WFKWSTKVSYSTFTNFPTDTVWA*WARCSE
Trigger: CTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATC...AGTGGGGAAGTTGGTGAATGTGGAATAACTTACCTTTGTGCTCCACTTAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR GCA 90 bp AACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGGCAGATTATATCAGGTaGCAAAACATTCCCTTTTAT +
Preference number: 2 (lower is better)
Translates to: NGNLDGYSLGLLGQMFRGADYIR*QNIPFY
Trigger: ATAAAAGGGAATGTTTTGGCACCTGATATAATCTGC...CCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp ATAGCCATCCAAAAGGGTATCAATGAGTGCTTTGCGTACACCCTTGAAAGGCGTCGTAGGTACTCATTCTaGCCAAAGACCCCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: IAIQKGINECFAYTLERRRRYSF*PKTPVP
Trigger: TGGGACAGGGGTCTTTGGCCAGAATGAGTACCTACG...ACGCCTTTCAAGGGTGTACGCAAAGCACTCATTGATACCCTTTTGGATGGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR TCA 90 bp GTGCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAAACCAACTTCCCCACTTaGCCTCCCACCAGTTCCTGT +
Preference number: 2 (lower is better)
Translates to: VHKGIDMEDISLQLSPLETNFPT*PPTSSC
Trigger: ACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGT...TTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR TCA 90 bp ACTCTAAGATGCCCTAAACCCAAACAGTTCCCATTCAACTGTGCACAAAGGTATACCAACTTCCCCACTTaGCCTCCCACCAGTTCCTGT +
Preference number: 2 (lower is better)
Translates to: TLRCPKPKQFPFNCAQRYTNFPT*PPTSSC
Trigger: ACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGT...ATACCTTTGTGCACAGTTGAATGGGAACTGTTTGGGTTTAGGGCATCTTAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR GCA 90 bp GCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAATTGATACAGTCTGGGCCTaGTGGGCCAGATGTTCCGAG +
Preference number: 2 (lower is better)
Translates to: AQRYRYGRHLTPTLTFGIDTVWA*WARCSE
Trigger: CTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATC...AATTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR GCA 90 bp CACCAACTTCCCCACTTGACCTCCCACCAGTTCCTGTCTGCTTTTTCCATCAATATAAAGTCAGACCAGTaGATTGGGCTTGTTAGGGGA +
Preference number: 2 (lower is better)
Translates to: HQLPHLTSHQFLSAFSINIKSDQ*IGLVRG
Trigger: TCCCCTAACAAGCCCAATGCACTGGTCTGACTTTAT...ATTGATGGAAAAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR GCA 90 bp CAAGGAAGTGCTTGGCACGTTTACTCTTCTGACTGGAGGGGAGGTATGTCACCTAAGGGTATCAATGAGTaGTTTGCGTACACCCTTGAA +
Preference number: 2 (lower is better)
Translates to: QGSAWHVYSSDWRGGMSPKGINE*FAYTLE
Trigger: TTCAAGGGTGTACGCAAAGCACTCATTGATACCCTT...AGGTGACATACCTCCCCTCCAGTCAGAAGAGTAAACGTGCCAAGCACTTCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp TGGTTTAAGTGGAGCACAAAGGTAAGTTATTCCACATTCACCAACTTCCCCACTTGGATGGATACAGTCTaGGCCTGCTGGGCCAGATGT +
Preference number: 2 (lower is better)
Translates to: WFKWSTKVSYSTFTNFPTWMDTV*ACWARC
Trigger: ACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCA...AGTGGGGAAGTTGGTGAATGTGGAATAACTTACCTTTGTGCTCCACTTAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR CAA 90 bp GTGGAGCACAAAGGTAAGTTATTCCACATTCACCAACTTCCCCACTaGACCTCCCACCAGTTCCTGTCTGCTTTTTCCATCAATCAACTC +
Preference number: 2 (lower is better)
Translates to: VEHKGKLFHIHQLPH*TSHQFLSAFSINQL
Trigger: GAGTTGATTGATGGAAAAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTGAATGTGGAATAACTTACCTTTGTGCTCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR GCA 90 bp GTGCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAAGCAAGCAGCCTGTCTTaGACATTGCAACTGACTGGC +
Preference number: 2 (lower is better)
Translates to: VHKGIDMEDISLQLSPLEASSLS*TLQLTG
Trigger: GCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGC...TTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR GCA 90 bp GCCCTAAACCCAAACAGTTCCCATTCAACTGTGCACAAAGGTATAGATATGGAAGCAAGCAGCCTGTCTTaGACATTGCAACTGACTGGC +
Preference number: 2 (lower is better)
Translates to: ALNPNSSHSTVHKGIDMEASSLS*TLQLTG
Trigger: GCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGC...TTCCATATCTATACCTTTGTGCACAGTTGAATGGGAACTGTTTGGGTTTAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp AAGCTGCAACACATCTGGTTTAAGTGGAGCACAAAGGTAAGTTATTCCACATTCTGGATGGATACAGTCTaGGCCTGCTGGGCCAGATGT +
Preference number: 2 (lower is better)
Translates to: KLQHIWFKWSTKVSYSTFWMDTV*ACWARC
Trigger: ACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCA...GAATGTGGAATAACTTACCTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp TGCCCTAAACCCAAACAGTTCCCATTCAACTGTGCACAAAGGTATAGATATGGACAACGGGAACTTGGATaGATACAGTCTGGGCCTGCT +
Preference number: 2 (lower is better)
Translates to: CPKPKQFPFNCAQRYRYGQRELG*IQSGPA
Trigger: AGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTG...TCCATATCTATACCTTTGTGCACAGTTGAATGGGAACTGTTTGGGTTTAGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp CAGTTCCCATTCAACTGTGCACAAAGGTATAGATATGGAAGACATCTCACTCCACAACGGGAACTTGGATaGATACAGTCTGGGCCTGCT +
Preference number: 2 (lower is better)
Translates to: QFPFNCAQRYRYGRHLTPQRELG*IQSGPA
Trigger: AGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTG...TGGAGTGAGATGTCTTCCATATCTATACCTTTGTGCACAGTTGAATGGGAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp ACCATTCCTTCCTACTGTCACATAGCCTGGCAGATTATATCAGGTGCCAAAACAGATACAACGGGAACTTaGATGGATACAGTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: TIPSYCHIAWQIISGAKTDTTGT*MDTVWA
Trigger: GGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATC...TGTTTTGGCACCTGATATAATCTGCCAGGCTATGTGACAGTAGGAAGGAATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp TTGCAACTGACTGGCTTAATCTACGGCAAGAGTCCTTCAGCTCCGTCACAGAGTAGGGAAGGTGAACTATaGCTGAAACCAAGTGAAGAT +
Preference number: 2 (lower is better)
Translates to: LQLTGLIYGKSPSAPSQSREGEL*LKPSED
Trigger: ATCTTCACTTGGTTTCAGCCATAGTTCACCTTCCCT...ACTCTGTGACGGAGCTGAAGGACTCTTGCCGTAGATTAAGCCAGTCAGTTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CCA 90 bp ATTCCACATTCACCAACTTCCCCACTTGACCTCCCACCAGTTCCTGTCTGCTTTAAGCTGCAACACATCTaGTTTAAGTGGAGCACAAAG +
Preference number: 2 (lower is better)
Translates to: IPHSPTSPLDLPPVPVCFKLQHI*FKWSTK
Trigger: CTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTT...AAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTGAATGTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp GTGCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAAGGTATGTCACCTGGATaGTTGTTGGGGAGACCTCAG +
Preference number: 2 (lower is better)
Translates to: VHKGIDMEDISLQLSPLEGMSPG*LLGRPQ
Trigger: CTGAGGTCTCCCCAACAACCATCCAGGTGACATACC...TTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp ATTCCACATTCACCAACTTCCCCACTTGACCTCCCACCAGTTCCTGTCTGCTTTGCCTTCAGAATGAAATaGGATCTCAGAGGTACGAAT +
Preference number: 2 (lower is better)
Translates to: IPHSPTSPLDLPPVPVCFAFRMK*DLRGTN
Trigger: ATTCGTACCTCTGAGATCCCATTTCATTCTGAAGGC...AAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTGAATGTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648267.1
3UTR-3UTR CCA 90 bp GACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGCACATTGCAACTGACTaGCTTAATCTACGGCAAGAG +
Preference number: 2 (lower is better)
Translates to: DTSSKNSGYNGNLDGYSLHIATD*LNLRQE
Trigger: CTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTG...CAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CCA 90 bp GATCCTTGCATGTCAGGAAAGCTGCAACACATCTGGTTTAAGTGGAGCACAAAGCACATTGCAACTGACTaGCTTAATCTACGGCAAGAG +
Preference number: 2 (lower is better)
Translates to: DPCMSGKLQHIWFKWSTKHIATD*LNLRQE
Trigger: CTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTG...CTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTTTCCTGACATGCAAGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp CAATCAACTCTAAGATGCCCTAAACCCAAACAGTTCCCATTCAACTGTGCACAAGATACAACGGGAACTTaGATGGATACAGTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: QSTLRCPKPKQFPFNCAQDTTGT*MDTVWA
Trigger: GGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATC...TTGTGCACAGTTGAATGGGAACTGTTTGGGTTTAGGGCATCTTAGAGTTGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp AATTACCCTTTAGACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTGGATGGTATGTCACCTGGATaGTTGTTGGGGAGACCTCAG +
Preference number: 2 (lower is better)
Translates to: NYPLDTSSKNSGYNGNLDGMSPG*LLGRPQ
Trigger: CTGAGGTCTCCCCAACAACCATCCAGGTGACATACC...ATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGTCTAAAGGGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR TCA 90 bp TGGTTTAAGTGGAGCACAAAGGTAAGTTATTCCACATTCACCAACTTCCCCACTCCAAAAGGGTATCAATaGGTGCTTTGCGTACACCCT +
Preference number: 2 (lower is better)
Translates to: WFKWSTKVSYSTFTNFPTPKGYQ*VLCVHP
Trigger: AGGGTGTACGCAAAGCACTCATTGATACCCTTTTGG...AGTGGGGAAGTTGGTGAATGTGGAATAACTTACCTTTGTGCTCCACTTAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR GCA 90 bp ATTCCACATTCACCAACTTCCCCACTTGACCTCCCACCAGTTCCTGTCTGCTTTATTAAAGTAGATCCTTaGATGTCAGGAAAGCTGCAA +
Preference number: 2 (lower is better)
Translates to: IPHSPTSPLDLPPVPVCFIKVDP*MSGKLQ
Trigger: TTGCAGCTTTCCTGACATGCAAGGATCTACTTTAAT...AAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTGAATGTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR GCA 90 bp CAGTTCCCATTCAACTGTGCACAAAGGTATAGATATGGAAGACATCTCACTCCATCTAGCATCATCATCTaGAAGGAGCTGGGGCTCATA +
Preference number: 2 (lower is better)
Translates to: QFPFNCAQRYRYGRHLTPSSIII*KELGLI
Trigger: TATGAGCCCCAGCTCCTTGCAGATGATGATGCTAGA...TGGAGTGAGATGTCTTCCATATCTATACCTTTGTGCACAGTTGAATGGGAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648267.1
3UTR-3UTR CCA 90 bp TGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACCCTTTAGACACAAGCGATACAACGGGAACTTaGATGGATACAGTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: CSKNAHKEGLGNYPLDTSDTTGT*MDTVWA
Trigger: GGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATC...GCTTGTGTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CCA 90 bp GCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAATTGATACAACGGGAACTTaGATGGATACAGTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: AQRYRYGRHLTPTLTFGIDTTGT*MDTVWA
Trigger: GGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATC...AATTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp CAGTTCCCATTCAACTGTGCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTGAGTTAGGTCTTTaGCTGCTGACTGGTGATGTC +
Preference number: 2 (lower is better)
Translates to: QFPFNCAQRYRYGRHLTPTELGL*LLTGDV
Trigger: GACATCACCAGTCAGCAGCCAAAGACCTAACTCAGT...TGGAGTGAGATGTCTTCCATATCTATACCTTTGTGCACAGTTGAATGGGAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp GTGCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAAACTGAGTTAGGTCTTTaGCTGCTGACTGGTGATGTC +
Preference number: 2 (lower is better)
Translates to: VHKGIDMEDISLQLSPLETELGL*LLTGDV
Trigger: GACATCACCAGTCAGCAGCCAAAGACCTAACTCAGT...TTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR GCA 90 bp CACCAACTTCCCCACTTGACCTCCCACCAGTTCCTGTCTGCTTTTTCCATCAATGCAGATTATATCAGGTaGCAAAACATTCCCTTTTAT +
Preference number: 2 (lower is better)
Translates to: HQLPHLTSHQFLSAFSINADYIR*QNIPFY
Trigger: ATAAAAGGGAATGTTTTGGCACCTGATATAATCTGC...ATTGATGGAAAAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp TGTGCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGACACATTGCAACTGACTaGCTTAATCTACGGCAAGAG +
Preference number: 2 (lower is better)
Translates to: CAQRYRYGRHLTPTLTFGHIATD*LNLRQE
Trigger: CTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTG...TCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp TGTCACATAGCCTGGCAGATTATATCAGGTGCCAAAACATTCCCTTTTATTCAAGATACAACGGGAACTTaGATGGATACAGTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: CHIAWQIISGAKTFPFIQDTTGT*MDTVWA
Trigger: GGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATC...TTGAATAAAAGGGAATGTTTTGGCACCTGATATAATCTGCCAGGCTATGTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp AACTGTGCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTTCTCAGAGGTACGAATaGCATCCAGAGCTTTCATCC +
Preference number: 2 (lower is better)
Translates to: NCAQRYRYGRHLTPTLTFSQRYE*HPELSS
Trigger: GGATGAAAGCTCTGGATGCCATTCGTACCTCTGAGA...AAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGCACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648267.1
3UTR-3UTR TCA 90 bp GATCCTTGCATGTCAGGAAAGCTGCAACACATCTGGTTTAAGTGGAGCACAAAGAAGGTGAACTATGGCTaGAACCAAGTGAAGATTTTT +
Preference number: 2 (lower is better)
Translates to: DPCMSGKLQHIWFKWSTKKVNYG*NQVKIF
Trigger: AAAAATCTTCACTTGGTTTCAGCCATAGTTCACCTT...CTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTTTCCTGACATGCAAGGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR GCA 90 bp AAGCTGCAACACATCTGGTTTAAGTGGAGCACAAAGGTAAGTTATTCCACATTCATAAAGTCAGACCAGTaGATTGGGCTTGTTAGGGGA +
Preference number: 2 (lower is better)
Translates to: KLQHIWFKWSTKVSYSTFIKSDQ*IGLVRG
Trigger: TCCCCTAACAAGCCCAATGCACTGGTCTGACTTTAT...GAATGTGGAATAACTTACCTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp ATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAATTAAATAAACCTCAACGGGAACTTGGATaGATACAGTCTGGGCCTGCT +
Preference number: 2 (lower is better)
Translates to: IDMEDISLQLSPLELNKPQRELG*IQSGPA
Trigger: AGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTG...AGGTTTATTTAATTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR GCA 90 bp CAACACATCTGGTTTAAGTGGAGCACAAAGGTAAGTTATTCCACATTCACCAACCCACCAGTTCCTGTCTaGTTTTTCCATCAATCAACT +
Preference number: 2 (lower is better)
Translates to: QHIWFKWSTKVSYSTFTNPPVPV*FFHQST
Trigger: AGTTGATTGATGGAAAAAGCAGACAGGAACTGGTGG...GTTGGTGAATGTGGAATAACTTACCTTTGTGCTCCACTTAAACCAGATGTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR GCA 90 bp AATAGTCTTAGCCAATGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACAGGAGCGGAAATTCTTaGCCATTAAGGAACGGGGAT +
Preference number: 2 (lower is better)
Translates to: NSLSQCSKNAHKEGLGNYRSGNS*PLRNGD
Trigger: ATCCCCGTTCCTTAATGGGCAAGAATTTCCGCTCCT...GTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACATTGGCTAAGACTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp AATTACCCTTTAGACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTGGATAGGGAAGGTGAACTATaGCTGAAACCAAGTGAAGAT +
Preference number: 2 (lower is better)
Translates to: NYPLDTSSKNSGYNGNLDREGEL*LKPSED
Trigger: ATCTTCACTTGGTTTCAGCCATAGTTCACCTTCCCT...ATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGTCTAAAGGGTAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR TCA 90 bp TGTCACATAGCCTGGCAGATTATATCAGGTGCCAAAACATTCCCTTTTATTCAATCATACTTGATATCCTaGACCCTGGAGAGTCGAATA +
Preference number: 2 (lower is better)
Translates to: CHIAWQIISGAKTFPFIQSYLIS*TLESRI
Trigger: TATTCGACTCTCCAGGGTTCAGGATATCAAGTATGA...TTGAATAAAAGGGAATGTTTTGGCACCTGATATAATCTGCCAGGCTATGTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648267.1
3UTR-3UTR GCA 90 bp ACTCTAAGATGCCCTAAACCCAAACAGTTCCCATTCAACTGTGCACAAAGGTATATTAAAGTAGATCCTTaGATGTCAGGAAAGCTGCAA +
Preference number: 2 (lower is better)
Translates to: TLRCPKPKQFPFNCAQRYIKVDP*MSGKLQ
Trigger: TTGCAGCTTTCCTGACATGCAAGGATCTACTTTAAT...ATACCTTTGTGCACAGTTGAATGGGAACTGTTTGGGTTTAGGGCATCTTAGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR GCA 90 bp AATTACCCTTTAGACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTGGATTTCAATTCAAGGAAGTaGTTGGCACGTTTACTCTTC +
Preference number: 2 (lower is better)
Translates to: NYPLDTSSKNSGYNGNLDFNSRK*LARLLF
Trigger: GAAGAGTAAACGTGCCAAGCACTTCCTTGAATTGAA...ATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGTCTAAAGGGTAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CCA 90 bp AATAGTCTTAGCCAATGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACCACATTGCAACTGACTaGCTTAATCTACGGCAAGAG +
Preference number: 2 (lower is better)
Translates to: NSLSQCSKNAHKEGLGNYHIATD*LNLRQE
Trigger: CTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTG...GTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACATTGGCTAAGACTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CCA 90 bp TCACAGAGTACTCTCCAATGTGTTATAGTTATCCTTAAAGCTCTTCAATTCAAGGTTTACTCTTCTGACTaGAGGGGAGGTATGTCACCT +
Preference number: 2 (lower is better)
Translates to: SQSTLQCVIVILKALQFKVYSSD*RGGMSP
Trigger: AGGTGACATACCTCCCCTCCAGTCAGAAGAGTAAAC...CTTGAATTGAAGAGCTTTAAGGATAACTATAACACATTGGAGAGTACTCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR GCA 90 bp AAGCTGCAACACATCTGGTTTAAGTGGAGCACAAAGGTAAGTTATTCCACATTCATTAAAGTAGATCCTTaGATGTCAGGAAAGCTGCAA +
Preference number: 2 (lower is better)
Translates to: KLQHIWFKWSTKVSYSTFIKVDP*MSGKLQ
Trigger: TTGCAGCTTTCCTGACATGCAAGGATCTACTTTAAT...GAATGTGGAATAACTTACCTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp AAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAATTAAATTACTGTCACATAGCCTaGCAGATTATATCAGGTGCC +
Preference number: 2 (lower is better)
Translates to: KGIDMEDISLQLSPLELNYCHIA*QIISGA
Trigger: GGCACCTGATATAATCTGCCAGGCTATGTGACAGTA...ATTTAATTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR GCA 90 bp TGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACCCTTTAGACACAAGCGCAGATTATATCAGGTaGCAAAACATTCCCTTTTAT +
Preference number: 2 (lower is better)
Translates to: CSKNAHKEGLGNYPLDTSADYIR*QNIPFY
Trigger: ATAAAAGGGAATGTTTTGGCACCTGATATAATCTGC...GCTTGTGTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp AAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAATTAAATAAGCTGCAACACATCTaGTTTAAGTGGAGCACAAAG +
Preference number: 2 (lower is better)
Translates to: KGIDMEDISLQLSPLELNKLQHI*FKWSTK
Trigger: CTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTT...ATTTAATTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CCA 90 bp ATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAATTAAATAAACCTATTCAAGGAAGTGCTTaGCACGTTTACTCTTCTGAC +
Preference number: 2 (lower is better)
Translates to: IDMEDISLQLSPLELNKPIQGSA*HVYSSD
Trigger: GTCAGAAGAGTAAACGTGCCAAGCACTTCCTTGAAT...AGGTTTATTTAATTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
3UTR CCA 72 bp ACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTaGGCCAGATGTTCCGAGGGCGGCCCGGCAAGCAGC +
Preference number: 3 (lower is better)
Translates to: TTGTWMDTVWAC*ARCSEGGPASS
Trigger: GCTGCTTGCCGGGCCGCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR GCA 72 bp GATACAACGGGAACTTGGATGGATACAGTCTGGGCCTaGTGGGCCAGATGTTCCGAGGGCGGCCCGGCAAGC +
Preference number: 3 (lower is better)
Translates to: DTTGTWMDTVWA*WARCSEGGPAS
Trigger: GCTTGCCGGGCCGCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CAA 90 bp ACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGCGGATACAACGGGAACTaGGATGGATACAGTCTGGGC +
Preference number: 3 (lower is better)
Translates to: TGTWMDTVWACWARCSEGGYNGN*DGYSLG
Trigger: GCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCC...GCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CAA 90 bp AACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGGGATACAACGGGAACTaGGATGGATACAGTCTGGGC +
Preference number: 3 (lower is better)
Translates to: NGNLDGYSLGLLGQMFRGGYNGN*DGYSLG
Trigger: GCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCC...CCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR GCA 72 bp AGATGTTCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTaGACATTGCAACTGACTGGCTTAATCTACGGCAAG +
Preference number: 3 (lower is better)
Translates to: RCSEGGPASSLS*TLQLTGLIYGK
Trigger: CTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGAACATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR CCA 72 bp CCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTaGCTTAATCTACGGCAAGAGTCCTTCAGCTCCGTC +
Preference number: 3 (lower is better)
Translates to: PGKQPVLHIATD*LNLRQESFSSV
Trigger: GACGGAGCTGAAGGACTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CAA 90 bp GGTATGTCACCTGGATGGTTGTTGGGGAGACCTCAGGGGACTGAGTTAGGTCTTGGATACAACGGGAACTaGGATGGATACAGTCTGGGC +
Preference number: 3 (lower is better)
Translates to: GMSPGWLLGRPQGTELGLGYNGN*DGYSLG
Trigger: GCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCC...AAGACCTAACTCAGTCCCCTGAGGTCTCCCCAACAACCATCCAGGTGACATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR GCA 72 bp TGTTTCGCAGATCCAGCAGGTAGGAGCGGAAATTCTTaGCCATTAAGGAACGGGGATGCCGGCCTTCAGAAT +
Preference number: 3 (lower is better)
Translates to: CFADPAGRSGNS*PLRNGDAGLQN
Trigger: ATTCTGAAGGCCGGCATCCCCGTTCCTTAATGGGCAAGAATTTCCGCTCCTACCTGCTGGATCTGCGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CAA 90 bp GGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCAGCCTGTCTTGCACATaGCAACTGACTGGCTTAATC +
Preference number: 3 (lower is better)
Translates to: GYNGNLDGYSLGLLGQMFSLSCT*QLTGLI
Trigger: GATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCT...GAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CAA 90 bp AGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGCCTGTCTTGCACATaGCAACTGACTGGCTTAATC +
Preference number: 3 (lower is better)
Translates to: RTLDTTGTWMDTVWACWASLSCT*QLTGLI
Trigger: GATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCT...GGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CAA 90 bp CTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGCTTTGCGTACACCCTaGAAAGGCGTACTAGTGTTT +
Preference number: 3 (lower is better)
Translates to: LWIQRELGWIQSGPAGPDALRTP*KGVLVF
Trigger: AAACACTAGTACGCCTTTCAAGGGTGTACGCAAAGC...ATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CAA 90 bp AGCTCTTCAATTCAAGGAAGTGCTTGGCACGTTTACTCTTCTGACTGGAGGGGAGGCAAGCAGCCTGTCTaGCACATTGCAACTGACTGG +
Preference number: 3 (lower is better)
Translates to: SSSIQGSAWHVYSSDWRGGKQPV*HIATDW
Trigger: CCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCC...TCCCCTCCAGTCAGAAGAGTAAACGTGCCAAGCACTTCCTTGAATTGAAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CAA 90 bp AAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGTCCGGATACAACGGGAACTaGGATGGATACAGTCTGGGC +
Preference number: 3 (lower is better)
Translates to: KQPVLHIATDWLNLRQESGYNGN*DGYSLG
Trigger: GCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCC...GGACTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR TCA 72 bp TTGCCCATTAAGGAACGGGGATGCCGGCCTTCAGAATaGAATGGGATCTCAGAGGTACGAATGGCATCCAGA +
Preference number: 3 (lower is better)
Translates to: LPIKERGCRPSE*NGISEVRMASR
Trigger: TCTGGATGCCATTCGTACCTCTGAGATCCCATTTCATTCTGAAGGCCGGCATCCCCGTTCCTTAATGGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648267.1
3UTR CCA 72 bp ACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTaGATGGATACAGTCTGGGCCTGCTGGGCCAGATGT +
Preference number: 3 (lower is better)
Translates to: TQALRTLDTTGT*MDTVWACWARC
Trigger: ACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR CCA 72 bp ATTCAAGGAAGTGCTTGGCACGTTTACTCTTCTGACTaGAGGGGAGGTATGTCACCTGGATGGTTGTTGGGG +
Preference number: 3 (lower is better)
Translates to: IQGSAWHVYSSD*RGGMSPGWLLG
Trigger: CCCCAACAACCATCCAGGTGACATACCTCCCCTCCAGTCAGAAGAGTAAACGTGCCAAGCACTTCCTTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CAA 90 bp ATTCCACATTCACCAACTTCCCCACTTGACCTCCCACCAGTTCCTGTCTGCTTTACCAGTGCATTGGGCTaGTTAGGGGAAACCATTCCT +
Preference number: 3 (lower is better)
Translates to: IPHSPTSPLDLPPVPVCFTSALG*LGETIP
Trigger: AGGAATGGTTTCCCCTAACAAGCCCAATGCACTGGT...AAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTGAATGTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CAA 90 bp AAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGTCCAGCCTGTCTTGCACATaGCAACTGACTGGCTTAATC +
Preference number: 3 (lower is better)
Translates to: KQPVLHIATDWLNLRQESSLSCT*QLTGLI
Trigger: GATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCT...GGACTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CAA 90 bp CCTTTAGACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTGGATGGATACGGCAAGCAGCCTGTCTaGCACATTGCAACTGACTGG +
Preference number: 3 (lower is better)
Translates to: PLDTSSKNSGYNGNLDGYGKQPV*HIATDW
Trigger: CCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCC...GTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGTCTAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CAA 90 bp CACCAACTTCCCCACTTGACCTCCCACCAGTTCCTGTCTGCTTTTTCCATCAATGCTCATAAGGAAGGGTaGGGGAATTACCCTTTAGAC +
Preference number: 3 (lower is better)
Translates to: HQLPHLTSHQFLSAFSINAHKEG*GNYPLD
Trigger: GTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGC...ATTGATGGAAAAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CAA 90 bp GAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCACTCCAACTCTCACCTTaGGAATTAAATAAACCTGGA +
Preference number: 3 (lower is better)
Translates to: ELWIQRELGWIQSGPAGPLQLSP*ELNKPG
Trigger: TCCAGGTTTATTTAATTCCAAAGGTGAGAGTTGGAG...TGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CAA 90 bp ACTCTAAGATGCCCTAAACCCAAACAGTTCCCATTCAACTGTGCACAAAGGTATATGTCACCTGGATGGTaGTTGGGGAGACCTCAGGGG +
Preference number: 3 (lower is better)
Translates to: TLRCPKPKQFPFNCAQRYMSPGW*LGRPQG
Trigger: CCCCTGAGGTCTCCCCAACAACCATCCAGGTGACAT...ATACCTTTGTGCACAGTTGAATGGGAACTGTTTGGGTTTAGGGCATCTTAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CAA 90 bp CAATCAACTCTAAGATGCCCTAAACCCAAACAGTTCCCATTCAACTGTGCACAAGGCAAGCAGCCTGTCTaGCACATTGCAACTGACTGG +
Preference number: 3 (lower is better)
Translates to: QSTLRCPKPKQFPFNCAQGKQPV*HIATDW
Trigger: CCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCC...TTGTGCACAGTTGAATGGGAACTGTTTGGGTTTAGGGCATCTTAGAGTTGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CAA 90 bp ACTCTAAGATGCCCTAAACCCAAACAGTTCCCATTCAACTGTGCACAAAGGTATGGCAAGCAGCCTGTCTaGCACATTGCAACTGACTGG +
Preference number: 3 (lower is better)
Translates to: TLRCPKPKQFPFNCAQRYGKQPV*HIATDW
Trigger: CCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCC...ATACCTTTGTGCACAGTTGAATGGGAACTGTTTGGGTTTAGGGCATCTTAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CAA 90 bp TGCATGTCAGGAAAGCTGCAACACATCTGGTTTAAGTGGAGCACAAAGGTAAGTGGATACAACGGGAACTaGGATGGATACAGTCTGGGC +
Preference number: 3 (lower is better)
Translates to: CMSGKLQHIWFKWSTKVSGYNGN*DGYSLG
Trigger: GCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCC...ACTTACCTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTTTCCTGACATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CAA 90 bp TGCATGTCAGGAAAGCTGCAACACATCTGGTTTAAGTGGAGCACAAAGGTAAGTAGTCAGACCAGTGCATaGGGCTTGTTAGGGGAAACC +
Preference number: 3 (lower is better)
Translates to: CMSGKLQHIWFKWSTKVSSQTSA*GLLGET
Trigger: GGTTTCCCCTAACAAGCCCAATGCACTGGTCTGACT...ACTTACCTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTTTCCTGACATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CAA 90 bp AGCCAATGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACCCTTTAGACGGCAAGCAGCCTGTCTaGCACATTGCAACTGACTGG +
Preference number: 3 (lower is better)
Translates to: SQCSKNAHKEGLGNYPLDGKQPV*HIATDW
Trigger: CCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCC...GTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACATTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CAA 90 bp CTCCAATGTGTTATAGTTATCCTTAAAGCTCTTCAATTCAAGGAAGTGCTTGGCCACCAACTTCCCCACTaGACCTCCCACCAGTTCCTG +
Preference number: 3 (lower is better)
Translates to: LQCVIVILKALQFKEVLGHQLPH*TSHQFL
Trigger: CAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTG...GCCAAGCACTTCCTTGAATTGAAGAGCTTTAAGGATAACTATAACACATTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CAA 90 bp TGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGTCCTTCAGCTCCGTCAATAGTTGTAGCAACTTaGATTTCCCTGGGTTTCCAG +
Preference number: 3 (lower is better)
Translates to: CTLQLTGLIYGKSPSAPSIVVAT*ISLGFQ
Trigger: CTGGAAACCCAGGGAAATCAAAGTTGCTACAACTAT...TGACGGAGCTGAAGGACTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648267.1
3UTR GCA 72 bp CCAACTTCCCCACTTGACCTCCCACCAGTTCCTGTCTaGTTTTTCCATCAATCAACTCTAAGATGCCCTAAA +
Preference number: 3 (lower is better)
Translates to: PTSPLDLPPVPV*FFHQSTLRCPK
Trigger: TTTAGGGCATCTTAGAGTTGATTGATGGAAAAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CAA 90 bp CCTTTAGACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTGGATGGATACAGCCTGTCTTGCACATaGCAACTGACTGGCTTAATC +
Preference number: 3 (lower is better)
Translates to: PLDTSSKNSGYNGNLDGYSLSCT*QLTGLI
Trigger: GATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCT...GTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGTCTAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CAA 90 bp CTCCAATGTGTTATAGTTATCCTTAAAGCTCTTCAATTCAAGGAAGTGCTTGGCGGCAAGCAGCCTGTCTaGCACATTGCAACTGACTGG +
Preference number: 3 (lower is better)
Translates to: LQCVIVILKALQFKEVLGGKQPV*HIATDW
Trigger: CCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCC...GCCAAGCACTTCCTTGAATTGAAGAGCTTTAAGGATAACTATAACACATTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CAA 90 bp CAACTGACTGGCTTAATCTACGGCAAGAGTCCTTCAGCTCCGTCACAGAGTACTCTCCAACTCTCACCTTaGGAATTAAATAAACCTGGA +
Preference number: 3 (lower is better)
Translates to: QLTGLIYGKSPSAPSQSTLQLSP*ELNKPG
Trigger: TCCAGGTTTATTTAATTCCAAAGGTGAGAGTTGGAG...AGTACTCTGTGACGGAGCTGAAGGACTCTTGCCGTAGATTAAGCCAGTCAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CAA 90 bp TGCATGTCAGGAAAGCTGCAACACATCTGGTTTAAGTGGAGCACAAAGGTAAGTGTATCAATGAGTGCTTaGCGTACACCCTTGAAAGGC +
Preference number: 3 (lower is better)
Translates to: CMSGKLQHIWFKWSTKVSVSMSA*RTPLKG
Trigger: GCCTTTCAAGGGTGTACGCAAAGCACTCATTGATAC...ACTTACCTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTTTCCTGACATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
3UTR TCA 72 bp AAGGTAAGTTATTCCACATTCACCAACTTCCCCACTTaGCCTCCCACCAGTTCCTGTCTGCTTTTTCCATCA +
Preference number: 3 (lower is better)
Translates to: KVSYSTFTNFPT*PPTSSCLLFPS
Trigger: TGATGGAAAAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTGAATGTGGAATAACTTACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR GCA 72 bp GGCTGTTTCATAGCCATCCAAAAGGGTATCAATGAGTaGTTTGCGTACACCCTTGAAAGGCGTACTAGTGTT +
Preference number: 3 (lower is better)
Translates to: GCFIAIQKGINE*FAYTLERRTSV
Trigger: AACACTAGTACGCCTTTCAAGGGTGTACGCAAAGCACTCATTGATACCCTTTTGGATGGCTATGAAACAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CAA 90 bp GTGCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAAGCTCATAAGGAAGGGTaGGGGAATTACCCTTTAGAC +
Preference number: 3 (lower is better)
Translates to: VHKGIDMEDISLQLSPLEAHKEG*GNYPLD
Trigger: GTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGC...TTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CAA 90 bp TTTATAAAGTCAGACCAGTGCATTGGGCTTGTTAGGGGAAACCATTCCTTCCTAGCTCATAAGGAAGGGTaGGGGAATTACCCTTTAGAC +
Preference number: 3 (lower is better)
Translates to: FIKSDQCIGLVRGNHSFLAHKEG*GNYPLD
Trigger: GTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGC...TAGGAAGGAATGGTTTCCCCTAACAAGCCCAATGCACTGGTCTGACTTTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CAA 90 bp TGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACCCTTTAGACACAAGCACCAGTGCATTGGGCTaGTTAGGGGAAACCATTCCT +
Preference number: 3 (lower is better)
Translates to: CSKNAHKEGLGNYPLDTSTSALG*LGETIP
Trigger: AGGAATGGTTTCCCCTAACAAGCCCAATGCACTGGT...GCTTGTGTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CAA 90 bp AAGCTGCAACACATCTGGTTTAAGTGGAGCACAAAGGTAAGTTATTCCACATTCACCAGTGCATTGGGCTaGTTAGGGGAAACCATTCCT +
Preference number: 3 (lower is better)
Translates to: KLQHIWFKWSTKVSYSTFTSALG*LGETIP
Trigger: AGGAATGGTTTCCCCTAACAAGCCCAATGCACTGGT...GAATGTGGAATAACTTACCTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CAA 90 bp TGTCACATAGCCTGGCAGATTATATCAGGTGCCAAAACATTCCCTTTTATTCAAAGTCAGACCAGTGCATaGGGCTTGTTAGGGGAAACC +
Preference number: 3 (lower is better)
Translates to: CHIAWQIISGAKTFPFIQSQTSA*GLLGET
Trigger: GGTTTCCCCTAACAAGCCCAATGCACTGGTCTGACT...TTGAATAAAAGGGAATGTTTTGGCACCTGATATAATCTGCCAGGCTATGTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR TCA 72 bp TGTGCCCGGCCGCATCTGCTTTCTAATGTAAGAGACTaGTCTAATAGTCTAGAACCTGACAACTCTTATGGT +
Preference number: 3 (lower is better)
Translates to: CARPHLLSNVRD*SNSLEPDNSYG
Trigger: ACCATAAGAGTTGTCAGGTTCTAGACTATTAGATCAGTCTCTTACATTAGAAAGCAGATGCGGCCGGGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
3UTR-3UTR CAA 90 bp TGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACCCTTTAGACACAAGCAGCCTGTCTTGCACATaGCAACTGACTGGCTTAATC +
Preference number: 3 (lower is better)
Translates to: CSKNAHKEGLGNYPLDTSSLSCT*QLTGLI
Trigger: GATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCT...GCTTGTGTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR-3UTR CAA 90 bp CACATAGCCTGGCAGATTATATCAGGTGCCAAAACATTCCCTTTTATTCAATTTGGATACAACGGGAACTaGGATGGATACAGTCTGGGC +
Preference number: 3 (lower is better)
Translates to: HIAWQIISGAKTFPFIQFGYNGN*DGYSLG
Trigger: GCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCC...AAATTGAATAAAAGGGAATGTTTTGGCACCTGATATAATCTGCCAGGCTATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CAA 90 bp CAACACATCTGGTTTAAGTGGAGCACAAAGGTAAGTTATTCCACATTCACCAACGCTCATAAGGAAGGGTaGGGGAATTACCCTTTAGAC +
Preference number: 3 (lower is better)
Translates to: QHIWFKWSTKVSYSTFTNAHKEG*GNYPLD
Trigger: GTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGC...GTTGGTGAATGTGGAATAACTTACCTTTGTGCTCCACTTAAACCAGATGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CAA 90 bp AATTACCCTTTAGACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTGGATGTATCAATGAGTGCTTaGCGTACACCCTTGAAAGGC +
Preference number: 3 (lower is better)
Translates to: NYPLDTSSKNSGYNGNLDVSMSA*RTPLKG
Trigger: GCCTTTCAAGGGTGTACGCAAAGCACTCATTGATAC...ATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGTCTAAAGGGTAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
3UTR CCA 72 bp TTAGGGGAAACCATTCCTTCCTACTGTCACATAGCCTaGCAGATTATATCAGGTGCCAAAACATTCCCTTTT +
Preference number: 3 (lower is better)
Translates to: LGETIPSYCHIA*QIISGAKTFPF
Trigger: AAAAGGGAATGTTTTGGCACCTGATATAATCTGCCAGGCTATGTGACAGTAGGAAGGAATGGTTTCCCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR CCA 72 bp ATTTTGTTTATATGCTTTATGAAGGTCACTGCACTGTaGCAACAGTCCAACACTACTGTACCAGCTCCCTCT +
Preference number: 3 (lower is better)
Translates to: ILFICFMKVTAL*QQSNTTVPAPS
Trigger: AGAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
3UTR-3UTR CAA 90 bp GTGCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAACTCCAACTCTCACCTTaGGAATTAAATAAACCTGGA +
Preference number: 3 (lower is better)
Translates to: VHKGIDMEDISLQLSPLELQLSP*ELNKPG
Trigger: TCCAGGTTTATTTAATTCCAAAGGTGAGAGTTGGAG...TTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CAA 90 bp AATAGTCTTAGCCAATGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACGCTTTGCGTACACCCTaGAAAGGCGTACTAGTGTTT +
Preference number: 3 (lower is better)
Translates to: NSLSQCSKNAHKEGLGNYALRTP*KGVLVF
Trigger: AAACACTAGTACGCCTTTCAAGGGTGTACGCAAAGC...GTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACATTGGCTAAGACTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
3UTR-3UTR CAA 90 bp AAGCTGCAACACATCTGGTTTAAGTGGAGCACAAAGGTAAGTTATTCCACATTCCTCCAACTCTCACCTTaGGAATTAAATAAACCTGGA +
Preference number: 3 (lower is better)
Translates to: KLQHIWFKWSTKVSYSTFLQLSP*ELNKPG
Trigger: TCCAGGTTTATTTAATTCCAAAGGTGAGAGTTGGAG...GAATGTGGAATAACTTACCTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp CGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGCGGGCGCCTGGGTCCCCTaGAGCTCCCCGGCCATTTCC +
Preference number: 4 (lower is better)
Translates to: RELGWIQSGPAGPDVPRAGAWVP*SSPAIS
Trigger: GGAAATGGCCGGGGAGCTCCAGGGGACCCAGGCGCC...CGCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCCCCGCTGTCCTGGCTaGTCAGCCCAGGCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: RGRPGKQPVLHIATDWLNPRCPG*SAQAPP
Trigger: CGGCGGAGCCTGGGCTGACCAGCCAGGACAGCGGGG...ATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp GCACTGTGGCAACAGTCCAACACTACTGTACCAGCTCCCTCTGACACGTTCCCCCGAAGCGACGGCGCCTaGGTCCCCTGGAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: ALWQQSNTTVPAPSDTFPRSDGA*VPWSSP
Trigger: CGGGGAGCTCCAGGGGACCCAGGCGCCGTCGCTTCG...GGGGAACGTGTCAGAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CCA 90 bp GGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCCGAAGCGACGGCGCCTaGGTCCCCTGGAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: GPASSLSCTLQLTGLIYGRSDGA*VPWSSP
Trigger: CGGGGAGCTCCAGGGGACCCAGGCGCCGTCGCTTCG...GCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp GGGAGACCTCAGGGGACTGAGTTAGGTCTTTGGCTGCTGACTGGTGATGTCGCTCGAAGCGACGGCGCCTaGGTCCCCTGGAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: GRPQGTELGLWLLTGDVARSDGA*VPWSSP
Trigger: CGGGGAGCTCCAGGGGACCCAGGCGCCGTCGCTTCG...AGCGACATCACCAGTCAGCAGCCAAAGACCTAACTCAGTCCCCTGAGGTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp TGTGGCAACAGTCCAACACTACTGTACCAGCTCCCTCTGACACGTTCCCCTCCACCCCGCTGTCCTGGCTaGTCAGCCCAGGCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: CGNSPTLLYQLPLTRSPPPRCPG*SAQAPP
Trigger: CGGCGGAGCCTGGGCTGACCAGCCAGGACAGCGGGG...TGGAGGGGAACGTGTCAGAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CCA 90 bp GGATGGTTGTTGGGGAGACCTCAGGGGACTGAGTTAGGTCTTTGGCTGCTGACTCCCCGCTGTCCTGGCTaGTCAGCCCAGGCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: GWLLGRPQGTELGLWLLTPRCPG*SAQAPP
Trigger: CGGCGGAGCCTGGGCTGACCAGCCAGGACAGCGGGG...AGTCAGCAGCCAAAGACCTAACTCAGTCCCCTGAGGTCTCCCCAACAACCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGCGTTTACCCCGCTGTCCTaGCTGGTCAGCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: RELGWIQSGPAGPDVPRAFTPLS*LVSPGS
Trigger: GGAGCCTGGGCTGACCAGCCAGGACAGCGGGGTAAA...CGCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp AGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCGGCGCCTGGGTCCCCTaGAGCTCCCCGGCCATTTCC +
Preference number: 4 (lower is better)
Translates to: RTLDTTGTWMDTVWACWAGAWVP*SSPAIS
Trigger: GGAAATGGCCGGGGAGCTCCAGGGGACCCAGGCGCC...GGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp AAGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCGAAGCGACGGCGCCTaGGTCCCCTGGAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: KNSGYNGNLDGYSLGLLGRSDGA*VPWSSP
Trigger: CGGGGAGCTCCAGGGGACCCAGGCGCCGTCGCTTCG...GCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp CTGGGCCAGATGTTCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAGAGACCTCAGGGGACTaGGTTAGGTCTTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LGQMFRGRPGKQPVLHIAETSGD*VRSLAA
Trigger: AGCAGCCAAAGACCTAACTCAGTCCCCTGAGGTCTC...TGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGAACATCTGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp TGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTGGCGCCTGGGTCCCCTaGAGCTCCCCGGCCATTTCC +
Preference number: 4 (lower is better)
Translates to: WIQRELGWIQSGPAGPDVGAWVP*SSPAIS
Trigger: GGAAATGGCCGGGGAGCTCCAGGGGACCCAGGCGCC...AACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp AGTGCTTGGCACGTTTACTCTTCTGACTGGAGGGGAGGTATGTCACCTGGATGGGGCGCCTGGGTCCCCTaGAGCTCCCCGGCCATTTCC +
Preference number: 4 (lower is better)
Translates to: SAWHVYSSDWRGGMSPGWGAWVP*SSPAIS
Trigger: GGAAATGGCCGGGGAGCTCCAGGGGACCCAGGCGCC...CCATCCAGGTGACATACCTCCCCTCCAGTCAGAAGAGTAAACGTGCCAAGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp CGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATAAGCCAGACCCGGCCTaGAAACATGGCGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: RGRPGKQPVLHIATDWLNKPDPA*KHGGQA
Trigger: TGCCTGTCCGCCATGTTTTCAGGCCGGGTCTGGCTT...ATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp AACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGAAGCCAGACCCGGCCTaGAAACATGGCGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: NGNLDGYSLGLLGQMFRGKPDPA*KHGGQA
Trigger: TGCCTGTCCGCCATGTTTTCAGGCCGGGTCTGGCTT...CCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp AACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGCCCGGCCTGAAAACATaGCGGACAGGCAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: NGNLDGYSLGLLGQMFRGPGLKT*RTGRRA
Trigger: AGCTCTCCTGCCTGTCCGCCATGTTTTCAGGCCGGG...CCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
CDS-3UTR CCA 90 bp TATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTACTGTACCAGCTCCCTCGGCGCCTGGGTCCCCTaGAGCTCCCCGGCCATTTCC +
Preference number: 4 (lower is better)
Translates to: YEGHCTVATVQHYCTSSLGAWVP*SSPAIS
Trigger: GGAAATGGCCGGGGAGCTCCAGGGGACCCAGGCGCC...GAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CCA 90 bp CCACATTCACCAACTTCCCCACTTGACCTCCCACCAGTTCCTGTCTGCTTTTTCGGCGCCTGGGTCCCCTaGAGCTCCCCGGCCATTTCC +
Preference number: 4 (lower is better)
Translates to: PHSPTSPLDLPPVPVCFFGAWVP*SSPAIS
Trigger: GGAAATGGCCGGGGAGCTCCAGGGGACCCAGGCGCC...GAAAAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTGAATGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp GTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGTCCTTCAGCTCCCCCCGCTGTCCTGGCTaGTCAGCCCAGGCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: VLHIATDWLNLRQESFSSPRCPG*SAQAPP
Trigger: CGGCGGAGCCTGGGCTGACCAGCCAGGACAGCGGGG...GGAGCTGAAGGACTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGAC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp TTGCAACTGACTGGCTTAATCTACGGCAAGAGTCCTTCAGCTCCGTCACAGAGTCCCCGCTGTCCTGGCTaGTCAGCCCAGGCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: LQLTGLIYGKSPSAPSQSPRCPG*SAQAPP
Trigger: CGGCGGAGCCTGGGCTGACCAGCCAGGACAGCGGGG...ACTCTGTGACGGAGCTGAAGGACTCTTGCCGTAGATTAAGCCAGTCAGTTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp AGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCTACTGCCGGACGCCATaGCCTCCCTACCTCGCGCAG +
Preference number: 4 (lower is better)
Translates to: RTLDTTGTWMDTVWACWAYCRTP*PPYLAQ
Trigger: CTGCGCGAGGTAGGGAGGCCATGGCGTCCGGCAGTA...GGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp GGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACACAGTCTGGGCCTGCTaGGCCAGATGTTCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: GGPASSLSCTLQLTGLIYTVWAC*ARCSEG
Trigger: GCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGT...GTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp GCACTGTGGCAACAGTCCAACACTACTGTACCAGCTCCCTCTGACACGTTCCCCAAGCCAGACCCGGCCTaGAAACATGGCGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: ALWQQSNTTVPAPSDTFPKPDPA*KHGGQA
Trigger: TGCCTGTCCGCCATGTTTTCAGGCCGGGTCTGGCTT...GGGGAACGTGTCAGAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368516.1
CDS-3UTR TCA 90 bp CAGATGTTCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACGAGACCTCAGGGGACTaGGTTAGGTCTTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QMFRGRPGKQPVLHIATDETSGD*VRSLAA
Trigger: AGCAGCCAAAGACCTAACTCAGTCCCCTGAGGTCTC...GTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGAACATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp AACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGGATACAGTCTGGGCCTaGTGGGCCAGATGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: NGNLDGYSLGLLGQMFRGDTVWA*WARCSE
Trigger: CTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATC...CCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp TGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGTCCTTCAGCTCCGTCAGGCGCCTGGGTCCCCTaGAGCTCCCCGGCCATTTCC +
Preference number: 4 (lower is better)
Translates to: CTLQLTGLIYGKSPSAPSGAWVP*SSPAIS
Trigger: GGAAATGGCCGGGGAGCTCCAGGGGACCCAGGCGCC...TGACGGAGCTGAAGGACTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGCGCGTAGGTACTCATTCTaGCCAAAGACCCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: RELGWIQSGPAGPDVPRARRYSF*PKTPVP
Trigger: TGGGACAGGGGTCTTTGGCCAGAATGAGTACCTACG...CGCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp AACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGCACCTGGATGGTTGTTaGGGAGACCTCAGGGGACTG +
Preference number: 4 (lower is better)
Translates to: NGNLDGYSLGLLGQMFRGHLDGC*GDLRGL
Trigger: CAGTCCCCTGAGGTCTCCCCAACAACCATCCAGGTG...CCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp TACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAACAGTCTGGGCCTGCTaGGCCAGATGTTCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: YNGNLDGYSLGLLGQMFRTVWAC*ARCSEG
Trigger: GCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGT...TCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp TCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTATGGATGGATACAGTCTaGGCCTGCTGGGCCAGATGT +
Preference number: 4 (lower is better)
Translates to: SEGGPASSLSCTLQLTGLWMDTV*ACWARC
Trigger: ACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCA...TAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp GAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAAAGCCAGACCCGGCCTaGAAACATGGCGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: ELWIQRELGWIQSGPAGPKPDPA*KHGGQA
Trigger: TGCCTGTCCGCCATGTTTTCAGGCCGGGTCTGGCTT...TGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp GAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCGAGACCTCAGGGGACTaGGTTAGGTCTTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: EGGPASSLSCTLQLTGLIETSGD*VRSLAA
Trigger: AGCAGCCAAAGACCTAACTCAGTCCCCTGAGGTCTC...GATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp AACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGACCAACTTCCCCACTTaGCCTCCCACCAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: NGNLDGYSLGLLGQMFRGTNFPT*PPTSSC
Trigger: ACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGT...CCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR TCA 90 bp GAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTGTCCCACAGGGACATaGGGTCCCCTTCGAGATTTC +
Preference number: 4 (lower is better)
Translates to: EGGPASSLSCTLQLTGLICPTGT*GPLRDF
Trigger: GAAATCTCGAAGGGGACCTCATGTCCCTGTGGGACA...GATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp AAGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCTTCCAGCTTCCCCCTaGCACGTGACTCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: KNSGYNGNLDGYSLGLLGLPASP*HVTQAG
Trigger: GCCTGCCTGAGTCACGTGTCAGGGGGAAGCTGGAAG...GCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000640799.1
CDS-3UTR GCA 90 bp TCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAGCAAGCAGCCTGTCTTaGACATTGCAACTGACTGGC +
Preference number: 4 (lower is better)
Translates to: SEGGPASSLSCTLQLTGLASSLS*TLQLTG
Trigger: GCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGC...TAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp GAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCACCCGGCCTGAAAACATaGCGGACAGGCAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: ELWIQRELGWIQSGPAGPPGLKT*RTGRRA
Trigger: AGCTCTCCTGCCTGTCCGCCATGTTTTCAGGCCGGG...TGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
CDS-3UTR CCA 90 bp GGAAACCATTCCTTCCTACTGTCACATAGCCTGGCAGATTATATCAGGTGCCAACGAAGCGACGGCGCCTaGGTCCCCTGGAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: GNHSFLLSHSLADYIRCQRSDGA*VPWSSP
Trigger: CGGGGAGCTCCAGGGGACCCAGGCGCCGTCGCTTCG...TTGGCACCTGATATAATCTGCCAGGCTATGTGACAGTAGGAAGGAATGGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp AAGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCTTTACCCCGCTGTCCTaGCTGGTCAGCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: KNSGYNGNLDGYSLGLLGFTPLS*LVSPGS
Trigger: GGAGCCTGGGCTGACCAGCCAGGACAGCGGGGTAAA...GCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp TGGCAACAGTCCAACACTACTGTACCAGCTCCCTCTGACACGTTCCCCTCCAAATTTACCCCGCTGTCCTaGCTGGTCAGCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: WQQSNTTVPAPSDTFPSKFTPLS*LVSPGS
Trigger: GGAGCCTGGGCTGACCAGCCAGGACAGCGGGGTAAA...TTTGGAGGGGAACGTGTCAGAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CCA 90 bp TGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTTTTACCCCGCTGTCCTaGCTGGTCAGCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: WIQRELGWIQSGPAGPDVFTPLS*LVSPGS
Trigger: GGAGCCTGGGCTGACCAGCCAGGACAGCGGGGTAAA...AACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CTGGGCCAGATGTTCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCATCATCTGCAAGGAGCTaGGGCTCATACTTGATATCC +
Preference number: 4 (lower is better)
Translates to: LGQMFRGRPGKQPVLHIASSARS*GSYLIS
Trigger: GGATATCAAGTATGAGCCCCAGCTCCTTGCAGATGA...TGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGAACATCTGGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CAGATGTTCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACGGTATGTCACCTGGATaGTTGTTGGGGAGACCTCAG +
Preference number: 4 (lower is better)
Translates to: QMFRGRPGKQPVLHIATDGMSPG*LLGRPQ
Trigger: CTGAGGTCTCCCCAACAACCATCCAGGTGACATACC...GTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGAACATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGACAGTCTGGGCCTGCTaGGCCAGATGTTCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: PASSLSCTLQLTGLIYGKTVWAC*ARCSEG
Trigger: GCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGT...CTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CAGATGTTCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACCAACGGGAACTTGGATaGATACAGTCTGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: QMFRGRPGKQPVLHIATDQRELG*IQSGPA
Trigger: AGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTG...GTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGAACATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
3UTR CAA 72 bp TCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATaGCAACTGACTGGCTTAATCTACGGCAAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: SEGGPASSLSCT*QLTGLIYGKSP
Trigger: AGGACTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp TGGCAACAGTCCAACACTACTGTACCAGCTCCCTCTGACACGTTCCCCTCCAAAATTCCCAACCTCAGATaGTCCTCCCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: WQQSNTTVPAPSDTFPSKIPNLR*SSRLGL
Trigger: GAGGCCGAGGCGGGAGGATCATCTGAGGTTGGGAAT...TTTGGAGGGGAACGTGTCAGAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368518.5
CDS-3UTR GCA 90 bp AACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGGCAAGCAGCCTGTCTTaGACATTGCAACTGACTGGC +
Preference number: 4 (lower is better)
Translates to: NGNLDGYSLGLLGQMFRGASSLS*TLQLTG
Trigger: GCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGC...CCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp CTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGATACAGTCTGGGCCTaGTGGGCCAGATGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: LWIQRELGWIQSGPAGPDDTVWA*WARCSE
Trigger: CTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATC...ATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp TATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTACTGTACCAGCTCCCTCTTTACCCCGCTGTCCTaGCTGGTCAGCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: YEGHCTVATVQHYCTSSLFTPLS*LVSPGS
Trigger: GGAGCCTGGGCTGACCAGCCAGGACAGCGGGGTAAA...GAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CCA 90 bp GAAGTGCTTGGCACGTTTACTCTTCTGACTGGAGGGGAGGTATGTCACCTGGATTTTACCCCGCTGTCCTaGCTGGTCAGCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: EVLGTFTLLTGGEVCHLDFTPLS*LVSPGS
Trigger: GGAGCCTGGGCTGACCAGCCAGGACAGCGGGGTAAA...ATCCAGGTGACATACCTCCCCTCCAGTCAGAAGAGTAAACGTGCCAAGCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTACTGTACCAGCTCCTACTGCCGGACGCCATaGCCTCCCTACCTCGCGCAG +
Preference number: 4 (lower is better)
Translates to: LYEGHCTVATVQHYCTSSYCRTP*PPYLAQ
Trigger: CTGCGCGAGGTAGGGAGGCCATGGCGTCCGGCAGTA...GGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CCA 90 bp GTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGTCCTTCAGCTCCTACTGCCGGACGCCATaGCCTCCCTACCTCGCGCAG +
Preference number: 4 (lower is better)
Translates to: VLHIATDWLNLRQESFSSYCRTP*PPYLAQ
Trigger: CTGCGCGAGGTAGGGAGGCCATGGCGTCCGGCAGTA...GGAGCTGAAGGACTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp TACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGACACCTGGATGGTTGTTaGGGAGACCTCAGGGGACTG +
Preference number: 4 (lower is better)
Translates to: YNGNLDGYSLGLLGQMFRHLDGC*GDLRGL
Trigger: CAGTCCCCTGAGGTCTCCCCAACAACCATCCAGGTG...TCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGGTATGTCACCTGGATaGTTGTTGGGGAGACCTCAG +
Preference number: 4 (lower is better)
Translates to: QRELGWIQSGPAGPDVPRGMSPG*LLGRPQ
Trigger: CTGAGGTCTCCCCAACAACCATCCAGGTGACATACC...CCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp GAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCGGTATGTCACCTGGATaGTTGTTGGGGAGACCTCAG +
Preference number: 4 (lower is better)
Translates to: EGGPASSLSCTLQLTGLIGMSPG*LLGRPQ
Trigger: CTGAGGTCTCCCCAACAACCATCCAGGTGACATACC...GATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CTGGGCCAGATGTTCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCACACATTGCAACTGACTaGCTTAATCTACGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: LGQMFRGRPGKQPVLHIAHIATD*LNLRQE
Trigger: CTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTG...TGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGAACATCTGGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGCGTCTCAGAGGTACGAATaGCATCCAGAGCTTTCATCC +
Preference number: 4 (lower is better)
Translates to: RELGWIQSGPAGPDVPRASQRYE*HPELSS
Trigger: GGATGAAAGCTCTGGATGCCATTCGTACCTCTGAGA...CGCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350592.7
ENST00000368521.10
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp GAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCCCTCTTTCAAGTCCTTaGGGGCATTGTGTCCCACAG +
Preference number: 4 (lower is better)
Translates to: EGGPASSLSCTLQLTGLIPLSSP*GHCVPQ
Trigger: CTGTGGGACACAATGCCCCCAAGGACTTGAAAGAGG...GATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
3UTR CAA 72 bp CAGATGTTCCGAGGGCGGCCCGGCAAGCAGCCTGTCTaGCACATTGCAACTGACTGGCTTAATCTACGGCAA +
Preference number: 4 (lower is better)
Translates to: QMFRGRPGKQPV*HIATDWLNLRQ
Trigger: TTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGAACATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp GGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCTGTCCCACAGGGACATaGGGTCCCCTTCGAGATTTC +
Preference number: 4 (lower is better)
Translates to: GYNGNLDGYSLGLLGQMFCPTGT*GPLRDF
Trigger: GAAATCTCGAAGGGGACCTCATGTCCCTGTGGGACA...GAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp TGTGGCAACAGTCCAACACTACTGTACCAGCTCCCTCTGACACGTTCCCCTCCATGTACCAGCTCCCTCTaGCACGTTCCCCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: CGNSPTLLYQLPLTRSPPCTSSL*HVPLQT
Trigger: AGTTTGGAGGGGAACGTGTCAGAGGGAGCTGGTACA...TGGAGGGGAACGTGTCAGAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR GCA 90 bp TCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTATCTAGCATCATCATCTaGAAGGAGCTGGGGCTCATA +
Preference number: 4 (lower is better)
Translates to: SEGGPASSLSCTLQLTGLSSIII*KELGLI
Trigger: TATGAGCCCCAGCTCCTTGCAGATGATGATGCTAGA...TAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp TCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAAGGAGCGGAAATTCTTaGCCATTAAGGAACGGGGAT +
Preference number: 4 (lower is better)
Translates to: SEGGPASSLSCTLQLTGLRSGNS*PLRNGD
Trigger: ATCCCCGTTCCTTAATGGGCAAGAATTTCCGCTCCT...TAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp CTGGGCCAGATGTTCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAAAGGGTATCAATGAGTaGTTTGCGTACACCCTTGAA +
Preference number: 4 (lower is better)
Translates to: LGQMFRGRPGKQPVLHIAKGINE*FAYTLE
Trigger: TTCAAGGGTGTACGCAAAGCACTCATTGATACCCTT...TGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGAACATCTGGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp GCACTGTGGCAACAGTCCAACACTACTGTACCAGCTCCCTCTGACACGTTCCCCTTCAAGAGATTCTCCTaGCTCAGCCTCCCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: ALWQQSNTTVPAPSDTFPFKRFS*LSLPRS
Trigger: GCTTCTGGGGAGGCTGAGGCAGGAGAATCTCTTGAA...GGGGAACGTGTCAGAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368518.5
CDS-3UTR CCA 90 bp CCTTTAGACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTGGATGGATACGGCGCCTGGGTCCCCTaGAGCTCCCCGGCCATTTCC +
Preference number: 4 (lower is better)
Translates to: PLDTSSKNSGYNGNLDGYGAWVP*SSPAIS
Trigger: GGAAATGGCCGGGGAGCTCCAGGGGACCCAGGCGCC...GTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGTCTAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp TTTATAAAGTCAGACCAGTGCATTGGGCTTGTTAGGGGAAACCATTCCTTCCTACGAAGCGACGGCGCCTaGGTCCCCTGGAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: FIKSDQCIGLVRGNHSFLRSDGA*VPWSSP
Trigger: CGGGGAGCTCCAGGGGACCCAGGCGCCGTCGCTTCG...TAGGAAGGAATGGTTTCCCCTAACAAGCCCAATGCACTGGTCTGACTTTATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp TCTAAGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGTTTACCCCGCTGTCCTaGCTGGTCAGCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SKNSGYNGNLDGYSLGLLFTPLS*LVSPGS
Trigger: GGAGCCTGGGCTGACCAGCCAGGACAGCGGGGTAAA...CAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp GGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCCGTAGGTACTCATTCTaGCCAAAGACCCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: GPASSLSCTLQLTGLIYGRRYSF*PKTPVP
Trigger: TGGGACAGGGGTCTTTGGCCAGAATGAGTACCTACG...GCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp ACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGCACTGAGTTAGGTCTTTaGCTGCTGACTGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: TGTWMDTVWACWARCSEGTELGL*LLTGDV
Trigger: GACATCACCAGTCAGCAGCCAAAGACCTAACTCAGT...GCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp TGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCACCTGGATGGTTGTTaGGGAGACCTCAGGGGACTG +
Preference number: 4 (lower is better)
Translates to: WIQRELGWIQSGPAGPDVHLDGC*GDLRGL
Trigger: CAGTCCCCTGAGGTCTCCCCAACAACCATCCAGGTG...AACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp GGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGTATGTCACCTGGATaGTTGTTGGGGAGACCTCAG +
Preference number: 4 (lower is better)
Translates to: GGPASSLSCTLQLTGLIYGMSPG*LLGRPQ
Trigger: CTGAGGTCTCCCCAACAACCATCCAGGTGACATACC...GTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CTGGGCCAGATGTTCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAATTCAAGGAAGTGCTTaGCACGTTTACTCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: LGQMFRGRPGKQPVLHIAIQGSA*HVYSSD
Trigger: GTCAGAAGAGTAAACGTGCCAAGCACTTCCTTGAAT...TGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGAACATCTGGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp TGTGGCAACAGTCCAACACTACTGTACCAGCTCCCTCTGACACGTTCCCCTCCAGCTGGGGCTCATACTTaGTATCCTGAACCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: CGNSPTLLYQLPLTRSPPAGAHT*YPEPWR
Trigger: TCTCCAGGGTTCAGGATATCAAGTATGAGCCCCAGC...TGGAGGGGAACGTGTCAGAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR TCA 90 bp GAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGCTGGGGCTCATACTTaGTATCCTGAACCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ELWIQRELGWIQSGPAGPAGAHT*YPEPWR
Trigger: TCTCCAGGGTTCAGGATATCAAGTATGAGCCCCAGC...TGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp CTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGCTGGGGCTCATACTTaGTATCCTGAACCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LWIQRELGWIQSGPAGPDAGAHT*YPEPWR
Trigger: TCTCCAGGGTTCAGGATATCAAGTATGAGCCCCAGC...ATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp AGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCGCTGGGGCTCATACTTaGTATCCTGAACCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: RTLDTTGTWMDTVWACWAAGAHT*YPEPWR
Trigger: TCTCCAGGGTTCAGGATATCAAGTATGAGCCCCAGC...GGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp AGTGCTTGGCACGTTTACTCTTCTGACTGGAGGGGAGGTATGTCACCTGGATGGACCAACTTCCCCACTTaGCCTCCCACCAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: SAWHVYSSDWRGGMSPGWTNFPT*PPTSSC
Trigger: ACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGT...CCATCCAGGTGACATACCTCCCCTCCAGTCAGAAGAGTAAACGTGCCAAGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
CDS-3UTR TCA 90 bp GGGAGACCTCAGGGGACTGAGTTAGGTCTTTGGCTGCTGACTGGTGATGTCGCTTGCCGGCCTTCAGAATaGAATGGGATCTCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: GRPQGTELGLWLLTGDVACRPSE*NGISEV
Trigger: TACCTCTGAGATCCCATTTCATTCTGAAGGCCGGCA...AGCGACATCACCAGTCAGCAGCCAAAGACCTAACTCAGTCCCCTGAGGTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp TACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAAGAGCTCCCAATTCGTaGTTTAACCGCAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: YNGNLDGYSLGLLGQMFRRAPNS*FNRSGQ
Trigger: CTGGCCACTGCGGTTAAAGCACGAATTGGGAGCTCT...TCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp GAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGCAAGCAGCCTGTCTTaGACATTGCAACTGACTGGC +
Preference number: 4 (lower is better)
Translates to: ELWIQRELGWIQSGPAGPASSLS*TLQLTG
Trigger: GCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGC...TGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CACCAACTTCCCCACTTGACCTCCCACCAGTTCCTGTCTGCTTTTTCCATCAATCCCGGCCTGAAAACATaGCGGACAGGCAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: HQLPHLTSHQFLSAFSINPGLKT*RTGRRA
Trigger: AGCTCTCCTGCCTGTCCGCCATGTTTTCAGGCCGGG...ATTGATGGAAAAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
CDS-3UTR CCA 90 bp TGGATTTTGTTTATATGCTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACCGAAGCGACGGCGCCTaGGTCCCCTGGAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: WILFICFMKVTALWQQSNRSDGA*VPWSSP
Trigger: CGGGGAGCTCCAGGGGACCCAGGCGCCGTCGCTTCG...GTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAAAATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CCA 90 bp GAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTCATCTGCAAGGAGCTaGGGCTCATACTTGATATCC +
Preference number: 4 (lower is better)
Translates to: EGGPASSLSCTLQLTGLISSARS*GSYLIS
Trigger: GGATATCAAGTATGAGCCCCAGCTCCTTGCAGATGA...GATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp AGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCCGTAGGTACTCATTCTaGCCAAAGACCCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: RTLDTTGTWMDTVWACWARRYSF*PKTPVP
Trigger: TGGGACAGGGGTCTTTGGCCAGAATGAGTACCTACG...GGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp CCCAATTCGTGCTTTAACCGCAGTGGCCAGCTCACTCAGGGCCTCCTGATAGCGACTGAGTTAGGTCTTTaGCTGCTGACTGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: PNSCFNRSGQLTQGLLIATELGL*LLTGDV
Trigger: GACATCACCAGTCAGCAGCCAAAGACCTAACTCAGT...CGCTATCAGGAGGCCCTGAGTGAGCTGGCCACTGCGGTTAAAGCACGAATTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp TACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGTATGTCACCTGGATaGTTGTTGGGGAGACCTCAG +
Preference number: 4 (lower is better)
Translates to: YNGNLDGYSLGLLGQMFRGMSPG*LLGRPQ
Trigger: CTGAGGTCTCCCCAACAACCATCCAGGTGACATACC...TCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGGTATGTCACCTGGATaGTTGTTGGGGAGACCTCAG +
Preference number: 4 (lower is better)
Translates to: LWIQRELGWIQSGPAGPDGMSPG*LLGRPQ
Trigger: CTGAGGTCTCCCCAACAACCATCCAGGTGACATACC...ATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp GAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCGTTTACTCTTCTGACTaGAGGGGAGGTATGTCACCT +
Preference number: 4 (lower is better)
Translates to: EGGPASSLSCTLQLTGLIVYSSD*RGGMSP
Trigger: AGGTGACATACCTCCCCTCCAGTCAGAAGAGTAAAC...GATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp AGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCCAACGGGAACTTGGATaGATACAGTCTGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: RTLDTTGTWMDTVWACWAQRELG*IQSGPA
Trigger: AGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTG...GGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp GGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACCGTCAGAGGTACGAATaGCATCCAGAGCTTTCATCC +
Preference number: 4 (lower is better)
Translates to: GGPASSLSCTLQLTGLIYRQRYE*HPELSS
Trigger: GGATGAAAGCTCTGGATGCCATTCGTACCTCTGACG...GTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470180.2
CDS-3UTR TCA 90 bp TGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTGCTGGGGCTCATACTTaGTATCCTGAACCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: WIQRELGWIQSGPAGPDVAGAHT*YPEPWR
Trigger: TCTCCAGGGTTCAGGATATCAAGTATGAGCCCCAGC...AACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp GGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCCCAAAAGGGTATCAATaGGTGCTTTGCGTACACCCT +
Preference number: 4 (lower is better)
Translates to: GPASSLSCTLQLTGLIYGPKGYQ*VLCVHP
Trigger: AGGGTGTACGCAAAGCACTCATTGATACCCTTTTGG...GCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp CTGGGCCAGATGTTCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAAAGGTGAACTATGGCTaGAACCAAGTGAAGATTTTT +
Preference number: 4 (lower is better)
Translates to: LGQMFRGRPGKQPVLHIAKVNYG*NQVKIF
Trigger: AAAAATCTTCACTTGGTTTCAGCCATAGTTCACCTT...TGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGAACATCTGGCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp GTCACTGCACTGTGGCAACAGTCCAACACTACTGTACCAGCTCCCTCTGACACGTGCCGGCCTTCAGAATaGAATGGGATCTCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: VTALWQQSNTTVPAPSDTCRPSE*NGISEV
Trigger: TACCTCTGAGATCCCATTTCATTCTGAAGGCCGGCA...CGTGTCAGAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGCAGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR TCA 90 bp GGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGTGTCCCACAGGGACATaGGGTCCCCTTCGAGATTTC +
Preference number: 4 (lower is better)
Translates to: GKQPVLHIATDWLNLRQECPTGT*GPLRDF
Trigger: GAAATCTCGAAGGGGACCTCATGTCCCTGTGGGACA...CTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp AGTGCTTTGCGTACACCCTTGAAAGGCGTACTAGTGTTTCGCAGATCCAGCAGGTGTCCCACAGGGACATaGGGTCCCCTTCGAGATTTC +
Preference number: 4 (lower is better)
Translates to: SALRTPLKGVLVFRRSSRCPTGT*GPLRDF
Trigger: GAAATCTCGAAGGGGACCTCATGTCCCTGTGGGACA...CCTGCTGGATCTGCGAAACACTAGTACGCCTTTCAAGGGTGTACGCAAAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp GCACTGTGGCAACAGTCCAACACTACTGTACCAGCTCCCTCTGACACGTTCCCCAGGAGCGGAAATTCTTaGCCATTAAGGAACGGGGAT +
Preference number: 4 (lower is better)
Translates to: ALWQQSNTTVPAPSDTFPRSGNS*PLRNGD
Trigger: ATCCCCGTTCCTTAATGGGCAAGAATTTCCGCTCCT...GGGGAACGTGTCAGAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR GCA 90 bp GGGAGACCTCAGGGGACTGAGTTAGGTCTTTGGCTGCTGACTGGTGATGTCGCTAGGAGCGGAAATTCTTaGCCATTAAGGAACGGGGAT +
Preference number: 4 (lower is better)
Translates to: GRPQGTELGLWLLTGDVARSGNS*PLRNGD
Trigger: ATCCCCGTTCCTTAATGGGCAAGAATTTCCGCTCCT...AGCGACATCACCAGTCAGCAGCCAAAGACCTAACTCAGTCCCCTGAGGTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp CCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGAGCTCCCAATTCGTaGTTTAACCGCAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PASSLSCTLQLTGLIYGKRAPNS*FNRSGQ
Trigger: CTGGCCACTGCGGTTAAAGCACGAATTGGGAGCTCT...CTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp CGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGCGTTCAATTCAAGGAAGTaGTTGGCACGTTTACTCTTC +
Preference number: 4 (lower is better)
Translates to: RELGWIQSGPAGPDVPRAFNSRK*LARLLF
Trigger: GAAGAGTAAACGTGCCAAGCACTTCCTTGAATTGAA...CGCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp AGTGCATTGGGCTTGTTAGGGGAAACCATTCCTTCCTACTGTCACATAGCCTGGGATACAGTCTGGGCCTaGTGGGCCAGATGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: SALGLLGETIPSYCHIAWDTVWA*WARCSE
Trigger: CTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATC...CCAGGCTATGTGACAGTAGGAAGGAATGGTTTCCCCTAACAAGCCCAATGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp ACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGCCCACCAGTTCCTGTCTaGTTTTTCCATCAATCAACT +
Preference number: 4 (lower is better)
Translates to: TGTWMDTVWACWARCSEGPPVPV*FFHQST
Trigger: AGTTGATTGATGGAAAAAGCAGACAGGAACTGGTGG...GCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp CTGGGCCAGATGTTCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAATTAAAGTAGATCCTTaGATGTCAGGAAAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LGQMFRGRPGKQPVLHIAIKVDP*MSGKLQ
Trigger: TTGCAGCTTTCCTGACATGCAAGGATCTACTTTAAT...TGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGAACATCTGGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp TGGATTTTGTTTATATGCTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACGGCGCCTGGGTCCCCTaGAGCTCCCCGGCCATTTCC +
Preference number: 4 (lower is better)
Translates to: WILFICFMKVTALWQQSNGAWVP*SSPAIS
Trigger: GGAAATGGCCGGGGAGCTCCAGGGGACCCAGGCGCC...GTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAAAATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CCA 90 bp TGTCACATAGCCTGGCAGATTATATCAGGTGCCAAAACATTCCCTTTTATTCAACCCCGCTGTCCTGGCTaGTCAGCCCAGGCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: CHIAWQIISGAKTFPFIQPRCPG*SAQAPP
Trigger: CGGCGGAGCCTGGGCTGACCAGCCAGGACAGCGGGG...TTGAATAAAAGGGAATGTTTTGGCACCTGATATAATCTGCCAGGCTATGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp AGTGCATTGGGCTTGTTAGGGGAAACCATTCCTTCCTACTGTCACATAGCCTGGCACCTGGATGGTTGTTaGGGAGACCTCAGGGGACTG +
Preference number: 4 (lower is better)
Translates to: SALGLLGETIPSYCHIAWHLDGC*GDLRGL
Trigger: CAGTCCCCTGAGGTCTCCCCAACAACCATCCAGGTG...CCAGGCTATGTGACAGTAGGAAGGAATGGTTTCCCCTAACAAGCCCAATGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp CCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGTCCTTCAGCCACCTGGATGGTTGTTaGGGAGACCTCAGGGGACTG +
Preference number: 4 (lower is better)
Translates to: PVLHIATDWLNLRQESFSHLDGC*GDLRGL
Trigger: CAGTCCCCTGAGGTCTCCCCAACAACCATCCAGGTG...GCTGAAGGACTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp GGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGTTTACTCTTCTGACTaGAGGGGAGGTATGTCACCT +
Preference number: 4 (lower is better)
Translates to: GGPASSLSCTLQLTGLIYVYSSD*RGGMSP
Trigger: AGGTGACATACCTCCCCTCCAGTCAGAAGAGTAAAC...GTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp TCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATTCAAGGAAGTGCTTaGCACGTTTACTCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: SEGGPASSLSCTLQLTGLIQGSA*HVYSSD
Trigger: GTCAGAAGAGTAAACGTGCCAAGCACTTCCTTGAAT...TAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CAAGGAAGTGCTTGGCACGTTTACTCTTCTGACTGGAGGGGAGGTATGTCACCTTGGATGGATACAGTCTaGGCCTGCTGGGCCAGATGT +
Preference number: 4 (lower is better)
Translates to: QGSAWHVYSSDWRGGMSPWMDTV*ACWARC
Trigger: ACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCA...AGGTGACATACCTCCCCTCCAGTCAGAAGAGTAAACGTGCCAAGCACTTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CTGGGCCAGATGTTCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCACACATCTGGTTTAAGTaGAGCACAAAGGTAAGTTAT +
Preference number: 4 (lower is better)
Translates to: LGQMFRGRPGKQPVLHIAHIWFK*STKVSY
Trigger: ATAACTTACCTTTGTGCTCCACTTAAACCAGATGTG...TGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGAACATCTGGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp GAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACTGTCACATAGCCTaGCAGATTATATCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: EGGPASSLSCTLQLTGLIYCHIA*QIISGA
Trigger: GGCACCTGATATAATCTGCCAGGCTATGTGACAGTA...GATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
3UTR CAA 72 bp GACACAAGCTCTAAGAACTCTGGATACAACGGGAACTaGGATGGATACAGTCTGGGCCTGCTGGGCCAGATG +
Preference number: 4 (lower is better)
Translates to: DTSSKNSGYNGN*DGYSLGLLGQM
Trigger: CATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp ACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGAAGCCAGACCCGGCCTaGAAACATGGCGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: TQALRTLDTTGTWMDTVWKPDPA*KHGGQA
Trigger: TGCCTGTCCGCCATGTTTTCAGGCCGGGTCTGGCTT...CCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp ATGTTGGTCAGGCTGGTCTCGGATTCCCAACCTCAGATGATCCTCCCGCCTCGGTCATACTTGATATCCTaGACCCTGGAGAGTCGAATA +
Preference number: 4 (lower is better)
Translates to: MLVRLVSDSQPQMILPPRSYLIS*TLESRI
Trigger: TATTCGACTCTCCAGGGTTCAGGATATCAAGTATGA...CCGAGGCGGGAGGATCATCTGAGGTTGGGAATCCGAGACCAGCCTGACCAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368518.5
CDS-3UTR TCA 90 bp CAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGTCATACTTGATATCCTaGACCCTGGAGAGTCGAATA +
Preference number: 4 (lower is better)
Translates to: QRELGWIQSGPAGPDVPRSYLIS*TLESRI
Trigger: TATTCGACTCTCCAGGGTTCAGGATATCAAGTATGA...CCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp ATGTTGGTCAGGCTGGTCTCGGATTCCCAACCTCAGATGATCCTCCCGCCTCGGTGTTTATATGCTTTATaGAGGTCACTGCACTGTGGC +
Preference number: 4 (lower is better)
Translates to: MLVRLVSDSQPQMILPPRCLYAL*RSLHCG
Trigger: GCCACAGTGCAGTGACCTTCATAAAGCATATAAACA...CCGAGGCGGGAGGATCATCTGAGGTTGGGAATCCGAGACCAGCCTGACCAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368518.5
CDS-3UTR GCA 90 bp TACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAAGGAGCGGAAATTCTTaGCCATTAAGGAACGGGGAT +
Preference number: 4 (lower is better)
Translates to: YNGNLDGYSLGLLGQMFRRSGNS*PLRNGD
Trigger: ATCCCCGTTCCTTAATGGGCAAGAATTTCCGCTCCT...TCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp GTCACTGCACTGTGGCAACAGTCCAACACTACTGTACCAGCTCCCTCTGACACGAGGAGCGGAAATTCTTaGCCATTAAGGAACGGGGAT +
Preference number: 4 (lower is better)
Translates to: VTALWQQSNTTVPAPSDTRSGNS*PLRNGD
Trigger: ATCCCCGTTCCTTAATGGGCAAGAATTTCCGCTCCT...CGTGTCAGAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGCAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR GCA 90 bp ACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGCTTCAATTCAAGGAAGTaGTTGGCACGTTTACTCTTC +
Preference number: 4 (lower is better)
Translates to: TGTWMDTVWACWARCSEGFNSRK*LARLLF
Trigger: GAAGAGTAAACGTGCCAAGCACTTCCTTGAATTGAA...GCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp AGGAGCGGAAATTCTTGCCCATTAAGGAACGGGGATGCCGGCCTTCAGAATGAAGCAAGCAGCCTGTCTTaGACATTGCAACTGACTGGC +
Preference number: 4 (lower is better)
Translates to: RSGNSCPLRNGDAGLQNEASSLS*TLQLTG
Trigger: GCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGC...TTCATTCTGAAGGCCGGCATCCCCGTTCCTTAATGGGCAAGAATTTCCGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp AGCTCTTCAATTCAAGGAAGTGCTTGGCACGTTTACTCTTCTGACTGGAGGGGAGATACAGTCTGGGCCTaGTGGGCCAGATGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: SSSIQGSAWHVYSSDWRGDTVWA*WARCSE
Trigger: CTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATC...TCCCCTCCAGTCAGAAGAGTAAACGTGCCAAGCACTTCCTTGAATTGAAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp GAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCCCACCAGTTCCTGTCTaGTTTTTCCATCAATCAACT +
Preference number: 4 (lower is better)
Translates to: EGGPASSLSCTLQLTGLIPPVPV*FFHQST
Trigger: AGTTGATTGATGGAAAAAGCAGACAGGAACTGGTGG...GATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp CTGGGCCAGATGTTCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAGCAGATTATATCAGGTaGCAAAACATTCCCTTTTAT +
Preference number: 4 (lower is better)
Translates to: LGQMFRGRPGKQPVLHIAADYIR*QNIPFY
Trigger: ATAAAAGGGAATGTTTTGGCACCTGATATAATCTGC...TGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGAACATCTGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp GCACTGTGGCAACAGTCCAACACTACTGTACCAGCTCCCTCTGACACGTTCCCCCTTTATGAAGGTCACTaGACTGTGGCAACAGTCCAA +
Preference number: 4 (lower is better)
Translates to: ALWQQSNTTVPAPSDTFPLYEGH*TVATVQ
Trigger: TTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAG...GGGGAACGTGTCAGAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CCA 90 bp TACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGATCATCTGCAAGGAGCTaGGGCTCATACTTGATATCC +
Preference number: 4 (lower is better)
Translates to: YNGNLDGYSLGLLGQMFRSSARS*GSYLIS
Trigger: GGATATCAAGTATGAGCCCCAGCTCCTTGCAGATGA...TCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp GGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCGTTTACTCTTCTGACTaGAGGGGAGGTATGTCACCT +
Preference number: 4 (lower is better)
Translates to: GYNGNLDGYSLGLLGQMFVYSSD*RGGMSP
Trigger: AGGTGACATACCTCCCCTCCAGTCAGAAGAGTAAAC...GAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGATTCAAGGAAGTGCTTaGCACGTTTACTCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: QRELGWIQSGPAGPDVPRIQGSA*HVYSSD
Trigger: GTCAGAAGAGTAAACGTGCCAAGCACTTCCTTGAAT...CCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp ACCATTCCTTCCTACTGTCACATAGCCTGGCAGATTATATCAGGTGCCAAAACAACAGTCTGGGCCTGCTaGGCCAGATGTTCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: TIPSYCHIAWQIISGAKTTVWAC*ARCSEG
Trigger: GCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGT...TGTTTTGGCACCTGATATAATCTGCCAGGCTATGTGACAGTAGGAAGGAATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp CCTTTAGACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTGGATGGATACACAGTCTGGGCCTGCTaGGCCAGATGTTCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: PLDTSSKNSGYNGNLDGYTVWAC*ARCSEG
Trigger: GCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGT...GTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGTCTAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CCAACTTCCCCACTTGACCTCCCACCAGTTCCTGTCTGCTTTTTCCATCAATCATGGATGGATACAGTCTaGGCCTGCTGGGCCAGATGT +
Preference number: 4 (lower is better)
Translates to: PTSPLDLPPVPVCFFHQSWMDTV*ACWARC
Trigger: ACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCA...TGATTGATGGAAAAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp CCACATTCACCAACTTCCCCACTTGACCTCCCACCAGTTCCTGTCTGCTTTTTCCAACGGGAACTTGGATaGATACAGTCTGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PHSPTSPLDLPPVPVCFFQRELG*IQSGPA
Trigger: AGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTG...GAAAAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTGAATGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp TGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTGATACAACGGGAACTTaGATGGATACAGTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: WIQRELGWIQSGPAGPDVDTTGT*MDTVWA
Trigger: GGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATC...AACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATAAGCTGCAACACATCTaGTTTAAGTGGAGCACAAAG +
Preference number: 4 (lower is better)
Translates to: RGRPGKQPVLHIATDWLNKLQHI*FKWSTK
Trigger: CTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTT...ATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp TATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTACTGTACCAGCTCCCTCCCTCTTTCAAGTCCTTaGGGGCATTGTGTCCCACAG +
Preference number: 4 (lower is better)
Translates to: YEGHCTVATVQHYCTSSLPLSSP*GHCVPQ
Trigger: CTGTGGGACACAATGCCCCCAAGGACTTGAAAGAGG...GAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368518.5
CDS-3UTR TCA 90 bp GCACTGTGGCAACAGTCCAACACTACTGTACCAGCTCCCTCTGACACGTTCCCCTCATACTTGATATCCTaGACCCTGGAGAGTCGAATA +
Preference number: 4 (lower is better)
Translates to: ALWQQSNTTVPAPSDTFPSYLIS*TLESRI
Trigger: TATTCGACTCTCCAGGGTTCAGGATATCAAGTATGA...GGGGAACGTGTCAGAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR TCA 90 bp GGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACTCATACTTGATATCCTaGACCCTGGAGAGTCGAATA +
Preference number: 4 (lower is better)
Translates to: GGPASSLSCTLQLTGLIYSYLIS*TLESRI
Trigger: TATTCGACTCTCCAGGGTTCAGGATATCAAGTATGA...GTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp TCTAAGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGCTGGGGCTCATACTTaGTATCCTGAACCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SKNSGYNGNLDGYSLGLLAGAHT*YPEPWR
Trigger: TCTCCAGGGTTCAGGATATCAAGTATGAGCCCCAGC...CAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp CTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTACTGTACCAGCTCCGCTGGGGCTCATACTTaGTATCCTGAACCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LYEGHCTVATVQHYCTSSAGAHT*YPEPWR
Trigger: TCTCCAGGGTTCAGGATATCAAGTATGAGCCCCAGC...GGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR TCA 90 bp GGTATGTCACCTGGATGGTTGTTGGGGAGACCTCAGGGGACTGAGTTAGGTCTTCCAAAAGGGTATCAATaGGTGCTTTGCGTACACCCT +
Preference number: 4 (lower is better)
Translates to: GMSPGWLLGRPQGTELGLPKGYQ*VLCVHP
Trigger: AGGGTGTACGCAAAGCACTCATTGATACCCTTTTGG...AAGACCTAACTCAGTCCCCTGAGGTCTCCCCAACAACCATCCAGGTGACATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp TCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAAAGGTGAACTATGGCTaGAACCAAGTGAAGATTTTT +
Preference number: 4 (lower is better)
Translates to: SEGGPASSLSCTLQLTGLKVNYG*NQVKIF
Trigger: AAAAATCTTCACTTGGTTTCAGCCATAGTTCACCTT...TAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp ATGTTGGTCAGGCTGGTCTCGGATTCCCAACCTCAGATGATCCTCCCGCCTCGGTCATTGCAAAGCGCATaGTTTGCCTCTTCACAAAAA +
Preference number: 4 (lower is better)
Translates to: MLVRLVSDSQPQMILPPRSLQSA*FASSQK
Trigger: TTTTTGTGAAGAGGCAAATCATGCGCTTTGCAATGA...CCGAGGCGGGAGGATCATCTGAGGTTGGGAATCCGAGACCAGCCTGACCAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368518.5
CDS-3UTR TCA 90 bp CAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGTCATTGCAAAGCGCATaGTTTGCCTCTTCACAAAAA +
Preference number: 4 (lower is better)
Translates to: QRELGWIQSGPAGPDVPRSLQSA*FASSQK
Trigger: TTTTTGTGAAGAGGCAAATCATGCGCTTTGCAATGA...CCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp GCACTGTGGCAACAGTCCAACACTACTGTACCAGCTCCCTCTGACACGTTCCCCTGTTTATATGCTTTATaGAGGTCACTGCACTGTGGC +
Preference number: 4 (lower is better)
Translates to: ALWQQSNTTVPAPSDTFPCLYAL*RSLHCG
Trigger: GCCACAGTGCAGTGACCTTCATAAAGCATATAAACA...GGGGAACGTGTCAGAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR GCA 90 bp CCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGGAGCGGAAATTCTTaGCCATTAAGGAACGGGGAT +
Preference number: 4 (lower is better)
Translates to: PASSLSCTLQLTGLIYGKRSGNS*PLRNGD
Trigger: ATCCCCGTTCCTTAATGGGCAAGAATTTCCGCTCCT...CTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp GCACTGTGGCAACAGTCCAACACTACTGTACCAGCTCCCTCTGACACGTTCCCCAAGGGTATCAATGAGTaGTTTGCGTACACCCTTGAA +
Preference number: 4 (lower is better)
Translates to: ALWQQSNTTVPAPSDTFPKGINE*FAYTLE
Trigger: TTCAAGGGTGTACGCAAAGCACTCATTGATACCCTT...GGGGAACGTGTCAGAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR GCA 90 bp CACCAACTTCCCCACTTGACCTCCCACCAGTTCCTGTCTGCTTTTTCCATCAATAGAGCTCCCAATTCGTaGTTTAACCGCAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: HQLPHLTSHQFLSAFSINRAPNS*FNRSGQ
Trigger: CTGGCCACTGCGGTTAAAGCACGAATTGGGAGCTCT...ATTGATGGAAAAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp CGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGCGGCAAAGCGCATGATTTaGCTCTTCACAAAAATAAAT +
Preference number: 4 (lower is better)
Translates to: RELGWIQSGPAGPDVPRAAKRMI*LFTKIN
Trigger: ATTTATTTTTGTGAAGAGGCAAATCATGCGCTTTGC...CGCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp GGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCCCTTCGAGATTTCATTaGAAAGCGCATGATTTGCCT +
Preference number: 4 (lower is better)
Translates to: GPASSLSCTLQLTGLIYGPSRFH*KAHDLP
Trigger: AGGCAAATCATGCGCTTTGCAATGAAATCTCGAAGG...GCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp AGCTCTTCAATTCAAGGAAGTGCTTGGCACGTTTACTCTTCTGACTGGAGGGGACCAAGATCGTGCTACTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: SSSIQGSAWHVYSSDWRGPRSCY*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAGTAGCACGATCTTGG...TCCCCTCCAGTCAGAAGAGTAAACGTGCCAAGCACTTCCTTGAATTGAAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470180.2
CDS-3UTR CCA 90 bp AAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAATTAAATCGAAGCGACGGCGCCTaGGTCCCCTGGAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: KGIDMEDISLQLSPLELNRSDGA*VPWSSP
Trigger: CGGGGAGCTCCAGGGGACCCAGGCGCCGTCGCTTCG...ATTTAATTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp ATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAATTAAATAAACCTCCCCGCTGTCCTGGCTaGTCAGCCCAGGCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: IDMEDISLQLSPLELNKPPRCPG*SAQAPP
Trigger: CGGCGGAGCCTGGGCTGACCAGCCAGGACAGCGGGG...AGGTTTATTTAATTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp TCACAGAGTACTCTCCAATGTGTTATAGTTATCCTTAAAGCTCTTCAATTCAAGCCCCGCTGTCCTGGCTaGTCAGCCCAGGCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: SQSTLQCVIVILKALQFKPRCPG*SAQAPP
Trigger: CGGCGGAGCCTGGGCTGACCAGCCAGGACAGCGGGG...CTTGAATTGAAGAGCTTTAAGGATAACTATAACACATTGGAGAGTACTCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp TTTATAAAGTCAGACCAGTGCATTGGGCTTGTTAGGGGAAACCATTCCTTCCTATTTACCCCGCTGTCCTaGCTGGTCAGCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: FIKSDQCIGLVRGNHSFLFTPLS*LVSPGS
Trigger: GGAGCCTGGGCTGACCAGCCAGGACAGCGGGGTAAA...TAGGAAGGAATGGTTTCCCCTAACAAGCCCAATGCACTGGTCTGACTTTATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp GCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAATTTACTGCCGGACGCCATaGCCTCCCTACCTCGCGCAG +
Preference number: 4 (lower is better)
Translates to: AQRYRYGRHLTPTLTFGIYCRTP*PPYLAQ
Trigger: CTGCGCGAGGTAGGGAGGCCATGGCGTCCGGCAGTA...AATTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp AATTACCCTTTAGACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTGGATTACTGCCGGACGCCATaGCCTCCCTACCTCGCGCAG +
Preference number: 4 (lower is better)
Translates to: NYPLDTSSKNSGYNGNLDYCRTP*PPYLAQ
Trigger: CTGCGCGAGGTAGGGAGGCCATGGCGTCCGGCAGTA...ATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGTCTAAAGGGTAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp TGGCAACAGTCCAACACTACTGTACCAGCTCCCTCTGACACGTTCCCCTCCAAATCATCTGCAAGGAGCTaGGGCTCATACTTGATATCC +
Preference number: 4 (lower is better)
Translates to: WQQSNTTVPAPSDTFPSKSSARS*GSYLIS
Trigger: GGATATCAAGTATGAGCCCCAGCTCCTTGCAGATGA...TTTGGAGGGGAACGTGTCAGAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CCA 90 bp GGGATGCCGGCCTTCAGAATGAAATGGGATCTCAGAGGTACGAATGGCATCCAGTCATCTGCAAGGAGCTaGGGCTCATACTTGATATCC +
Preference number: 4 (lower is better)
Translates to: GMPAFRMKWDLRGTNGIQSSARS*GSYLIS
Trigger: GGATATCAAGTATGAGCCCCAGCTCCTTGCAGATGA...CTGGATGCCATTCGTACCTCTGAGATCCCATTTCATTCTGAAGGCCGGCATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648267.1
CDS-3UTR CCA 90 bp TCTAAGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGCGTAGGTACTCATTCTaGCCAAAGACCCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: SKNSGYNGNLDGYSLGLLRRYSF*PKTPVP
Trigger: TGGGACAGGGGTCTTTGGCCAGAATGAGTACCTACG...CAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp AGTGCTTGGCACGTTTACTCTTCTGACTGGAGGGGAGGTATGTCACCTGGATGGACTGAGTTAGGTCTTTaGCTGCTGACTGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: SAWHVYSSDWRGGMSPGWTELGL*LLTGDV
Trigger: GACATCACCAGTCAGCAGCCAAAGACCTAACTCAGT...CCATCCAGGTGACATACCTCCCCTCCAGTCAGAAGAGTAAACGTGCCAAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATCACATTGCAACTGACTaGCTTAATCTACGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: LWIQRELGWIQSGPAGPDHIATD*LNLRQE
Trigger: CTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTG...ATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp GGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGGATACAACGGGAACTTaGATGGATACAGTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GKQPVLHIATDWLNLRQEDTTGT*MDTVWA
Trigger: GGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATC...CTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGTCCTTCAGCCCTCTTTCAAGTCCTTaGGGGCATTGTGTCCCACAG +
Preference number: 4 (lower is better)
Translates to: PVLHIATDWLNLRQESFSPLSSP*GHCVPQ
Trigger: CTGTGGGACACAATGCCCCCAAGGACTTGAAAGAGG...GCTGAAGGACTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
CDS-3UTR TCA 90 bp CAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGAAGGTGAACTATGGCTaGAACCAAGTGAAGATTTTT +
Preference number: 4 (lower is better)
Translates to: QRELGWIQSGPAGPDVPRKVNYG*NQVKIF
Trigger: AAAAATCTTCACTTGGTTTCAGCCATAGTTCACCTT...CCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp TACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGACCACCAGTTCCTGTCTaGTTTTTCCATCAATCAACT +
Preference number: 4 (lower is better)
Translates to: YNGNLDGYSLGLLGQMFRPPVPV*FFHQST
Trigger: AGTTGATTGATGGAAAAAGCAGACAGGAACTGGTGG...TCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp GTCACTGCACTGTGGCAACAGTCCAACACTACTGTACCAGCTCCCTCTGACACGCCTTCGAGATTTCATTaGAAAGCGCATGATTTGCCT +
Preference number: 4 (lower is better)
Translates to: VTALWQQSNTTVPAPSDTPSRFH*KAHDLP
Trigger: AGGCAAATCATGCGCTTTGCAATGAAATCTCGAAGG...CGTGTCAGAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGCAGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368518.5
CDS-3UTR GCA 90 bp AGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCCCTTCGAGATTTCATTaGAAAGCGCATGATTTGCCT +
Preference number: 4 (lower is better)
Translates to: RTLDTTGTWMDTVWACWAPSRFH*KAHDLP
Trigger: AGGCAAATCATGCGCTTTGCAATGAAATCTCGAAGG...GGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp GAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCACCTTCGAGATTTCATTaGAAAGCGCATGATTTGCCT +
Preference number: 4 (lower is better)
Translates to: ELWIQRELGWIQSGPAGPPSRFH*KAHDLP
Trigger: AGGCAAATCATGCGCTTTGCAATGAAATCTCGAAGG...TGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp AAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGTCCAGAGCTCCCAATTCGTaGTTTAACCCCCTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: KQPVLHIATDWLNLRQESRAPNS*FNPLSH
Trigger: ATGGGACAGGGGGTTAAAGCACGAATTGGGAGCTCT...GGACTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640799.1
CDS-3UTR CCA 90 bp TGTGGAATTAAAGTAGATCCTTGCATGTCAGGAAAGCTGCAACACATCTGGTTTTTTACCCCGCTGTCCTaGCTGGTCAGCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: CGIKVDPCMSGKLQHIWFFTPLS*LVSPGS
Trigger: GGAGCCTGGGCTGACCAGCCAGGACAGCGGGGTAAA...AAACCAGATGTGTTGCAGCTTTCCTGACATGCAAGGATCTACTTTAATTCCACA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp ATTTTGTTTATATGCTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTTACTGCCGGACGCCATaGCCTCCCTACCTCGCGCAG +
Preference number: 4 (lower is better)
Translates to: ILFICFMKVTALWQQSNTYCRTP*PPYLAQ
Trigger: CTGCGCGAGGTAGGGAGGCCATGGCGTCCGGCAGTA...AGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CCA 90 bp TGTCACATAGCCTGGCAGATTATATCAGGTGCCAAAACATTCCCTTTTATTCAATACTGCCGGACGCCATaGCCTCCCTACCTCGCGCAG +
Preference number: 4 (lower is better)
Translates to: CHIAWQIISGAKTFPFIQYCRTP*PPYLAQ
Trigger: CTGCGCGAGGTAGGGAGGCCATGGCGTCCGGCAGTA...TTGAATAAAAGGGAATGTTTTGGCACCTGATATAATCTGCCAGGCTATGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp GGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGTCATCTGCAAGGAGCTaGGGCTCATACTTGATATCC +
Preference number: 4 (lower is better)
Translates to: GKQPVLHIATDWLNLRQESSARS*GSYLIS
Trigger: GGATATCAAGTATGAGCCCCAGCTCCTTGCAGATGA...CTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp GGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGACTGAGTTAGGTCTTTaGCTGCTGACTGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: GKQPVLHIATDWLNLRQETELGL*LLTGDV
Trigger: GACATCACCAGTCAGCAGCCAAAGACCTAACTCAGT...CTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CCTTTAGACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTGGATGGATACCACCTGGATGGTTGTTaGGGAGACCTCAGGGGACTG +
Preference number: 4 (lower is better)
Translates to: PLDTSSKNSGYNGNLDGYHLDGC*GDLRGL
Trigger: CAGTCCCCTGAGGTCTCCCCAACAACCATCCAGGTG...GTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGTCTAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGCACATTGCAACTGACTaGCTTAATCTACGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: PASSLSCTLQLTGLIYGKHIATD*LNLRQE
Trigger: CTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTG...CTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp TACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAAGGGAAGGTGAACTATaGCTGAAACCAAGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: YNGNLDGYSLGLLGQMFRREGEL*LKPSED
Trigger: ATCTTCACTTGGTTTCAGCCATAGTTCACCTTCCCT...TCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp AAGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCTACTGTCACATAGCCTaGCAGATTATATCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: KNSGYNGNLDGYSLGLLGYCHIA*QIISGA
Trigger: GGCACCTGATATAATCTGCCAGGCTATGTGACAGTA...GCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp GAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGCCTTCAGAATGAAATaGGATCTCAGAGGTACGAAT +
Preference number: 4 (lower is better)
Translates to: ELWIQRELGWIQSGPAGPAFRMK*DLRGTN
Trigger: ATTCGTACCTCTGAGATCCCATTTCATTCTGAAGGC...TGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350592.7
ENST00000368521.10
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp CCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGTCATACTTGATATCCTaGACCCTGGAGAGTCGAATA +
Preference number: 4 (lower is better)
Translates to: PASSLSCTLQLTGLIYGKSYLIS*TLESRI
Trigger: TATTCGACTCTCCAGGGTTCAGGATATCAAGTATGA...CTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp ACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCTGGGGCTCATACTTaGTATCCTGAACCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: TQALRTLDTTGTWMDTVWAGAHT*YPEPWR
Trigger: TCTCCAGGGTTCAGGATATCAAGTATGAGCCCCAGC...CCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp CTCCAATGTGTTATAGTTATCCTTAAAGCTCTTCAATTCAAGGAAGTGCTTGGCCTTCCAGCTTCCCCCTaGCACGTGACTCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LQCVIVILKALQFKEVLGLPASP*HVTQAG
Trigger: GCCTGCCTGAGTCACGTGTCAGGGGGAAGCTGGAAG...GCCAAGCACTTCCTTGAATTGAAGAGCTTTAAGGATAACTATAACACATTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000640799.1
CDS-3UTR TCA 90 bp AGCCAATGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACCCTTTAGACGGCAGGAGAACCGCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SQCSKNAHKEGLGNYPLDGRRTA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGCGGTTCTCCTGCC...GTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACATTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470180.2
CDS-3UTR GCA 90 bp CACCAACTTCCCCACTTGACCTCCCACCAGTTCCTGTCTGCTTTTTCCATCAATAGGAGCGGAAATTCTTaGCCATTAAGGAACGGGGAT +
Preference number: 4 (lower is better)
Translates to: HQLPHLTSHQFLSAFSINRSGNS*PLRNGD
Trigger: ATCCCCGTTCCTTAATGGGCAAGAATTTCCGCTCCT...ATTGATGGAAAAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp GGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCTTCAATTCAAGGAAGTaGTTGGCACGTTTACTCTTC +
Preference number: 4 (lower is better)
Translates to: GYNGNLDGYSLGLLGQMFFNSRK*LARLLF
Trigger: GAAGAGTAAACGTGCCAAGCACTTCCTTGAATTGAA...GAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp AGTGCTTGGCACGTTTACTCTTCTGACTGGAGGGGAGGTATGTCACCTGGATGGCCTTCGAGATTTCATTaGAAAGCGCATGATTTGCCT +
Preference number: 4 (lower is better)
Translates to: SAWHVYSSDWRGGMSPGWPSRFH*KAHDLP
Trigger: AGGCAAATCATGCGCTTTGCAATGAAATCTCGAAGG...CCATCCAGGTGACATACCTCCCCTCCAGTCAGAAGAGTAAACGTGCCAAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp AGCCAATGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACCCTTTAGACCCCGGCCTGAAAACATaGCGGACAGGCAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: SQCSKNAHKEGLGNYPLDPGLKT*RTGRRA
Trigger: AGCTCTCCTGCCTGTCCGCCATGTTTTCAGGCCGGG...GTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACATTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
CDS-3UTR CCA 90 bp TGGATTTTGTTTATATGCTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACCCCGGCCTGAAAACATaGCGGACAGGCAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: WILFICFMKVTALWQQSNPGLKT*RTGRRA
Trigger: AGCTCTCCTGCCTGTCCGCCATGTTTTCAGGCCGGG...GTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAAAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368516.1
CDS-3UTR CCA 90 bp AATAGTCTTAGCCAATGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACTACTGCCGGACGCCATaGCCTCCCTACCTCGCGCAG +
Preference number: 4 (lower is better)
Translates to: NSLSQCSKNAHKEGLGNYYCRTP*PPYLAQ
Trigger: CTGCGCGAGGTAGGGAGGCCATGGCGTCCGGCAGTA...GTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACATTGGCTAAGACTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CCAACTTCCCCACTTGACCTCCCACCAGTTCCTGTCTGCTTTTTCCATCAATCATCATCTGCAAGGAGCTaGGGCTCATACTTGATATCC +
Preference number: 4 (lower is better)
Translates to: PTSPLDLPPVPVCFFHQSSSARS*GSYLIS
Trigger: GGATATCAAGTATGAGCCCCAGCTCCTTGCAGATGA...TGATTGATGGAAAAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp CTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTACTGTACCAGCTCCTCATCTGCAAGGAGCTaGGGCTCATACTTGATATCC +
Preference number: 4 (lower is better)
Translates to: LYEGHCTVATVQHYCTSSSSARS*GSYLIS
Trigger: GGATATCAAGTATGAGCCCCAGCTCCTTGCAGATGA...GGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CCA 90 bp GAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGCCTTCAGAATGAAATaGGATCTTTTGATTTCCCTG +
Preference number: 4 (lower is better)
Translates to: ELWIQRELGWIQSGPAGPAFRMK*DLLISL
Trigger: CAGGGAAATCAAAAGATCCCATTTCATTCTGAAGGC...TGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362076.8
ENST00000368519.5
CDS-3UTR CCA 90 bp CCTTCCTACTGTCACATAGCCTGGCAGATTATATCAGGTGCCAAAACATTCCCTGGTATGTCACCTGGATaGTTGTTGGGGAGACCTCAG +
Preference number: 4 (lower is better)
Translates to: PSYCHIAWQIISGAKTFPGMSPG*LLGRPQ
Trigger: CTGAGGTCTCCCCAACAACCATCCAGGTGACATACC...AGGGAATGTTTTGGCACCTGATATAATCTGCCAGGCTATGTGACAGTAGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp CCAACTTCCCCACTTGACCTCCCACCAGTTCCTGTCTGCTTTTTCCATCAATCAGTTTACTCTTCTGACTaGAGGGGAGGTATGTCACCT +
Preference number: 4 (lower is better)
Translates to: PTSPLDLPPVPVCFFHQSVYSSD*RGGMSP
Trigger: AGGTGACATACCTCCCCTCCAGTCAGAAGAGTAAAC...TGATTGATGGAAAAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp TGCATGTCAGGAAAGCTGCAACACATCTGGTTTAAGTGGAGCACAAAGGTAAGTTGGATGGATACAGTCTaGGCCTGCTGGGCCAGATGT +
Preference number: 4 (lower is better)
Translates to: CMSGKLQHIWFKWSTKVSWMDTV*ACWARC
Trigger: ACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCA...ACTTACCTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTTTCCTGACATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp GGAAACCATTCCTTCCTACTGTCACATAGCCTGGCAGATTATATCAGGTGCCAACAACGGGAACTTGGATaGATACAGTCTGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GNHSFLLSHSLADYIRCQQRELG*IQSGPA
Trigger: AGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTG...TTGGCACCTGATATAATCTGCCAGGCTATGTGACAGTAGGAAGGAATGGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp GCCAAAGACCCCTGTCCCATAGCGGGCTGTTTCATAGCCATCCAAAAGGGTATCAAGCTGCAACACATCTaGTTTAAGTGGAGCACAAAG +
Preference number: 4 (lower is better)
Translates to: AKDPCPIAGCFIAIQKGIKLQHI*FKWSTK
Trigger: CTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTT...GATACCCTTTTGGATGGCTATGAAACAGCCCGCTATGGGACAGGGGTCTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp GGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGTACTGTCACATAGCCTaGCAGATTATATCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: GKQPVLHIATDWLNLRQEYCHIA*QIISGA
Trigger: GGCACCTGATATAATCTGCCAGGCTATGTGACAGTA...CTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp CTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTACTGTACCAGCTCCTCTCAGAGGTACGAATaGCATCCAGAGCTTTCATCC +
Preference number: 4 (lower is better)
Translates to: LYEGHCTVATVQHYCTSSSQRYE*HPELSS
Trigger: GGATGAAAGCTCTGGATGCCATTCGTACCTCTGAGA...GGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CCA 90 bp AGTGCTTTGCGTACACCCTTGAAAGGCGTACTAGTGTTTCGCAGATCCAGCAGGGCCTTCAGAATGAAATaGGATCTCTGTAATCCCAGC +
Preference number: 4 (lower is better)
Translates to: SALRTPLKGVLVFRRSSRAFRMK*DLCNPS
Trigger: GCTGGGATTACAGAGATCCCATTTCATTCTGAAGGC...CCTGCTGGATCTGCGAAACACTAGTACGCCTTTCAAGGGTGTACGCAAAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470180.2
CDS-3UTR CCA 90 bp GGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGAGTCGTGAACAAAACTaGCATGGTGCCTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: GKQPVLHIATDWLNLRQESREQN*HGACIL
Trigger: AAGAATGCAGGCACCATGCCAGTTTTGTTCACGACT...CTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648267.1
3UTR CAA 72 bp TCCAAAAGGGTATCAATGAGTGCTTTGCGTACACCCTaGAAAGGCGTACTAGTGTTTCGCAGATCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SKRVSMSALRTP*KGVLVFRRSSR
Trigger: CCTGCTGGATCTGCGAAACACTAGTACGCCTTTCAAGGGTGTACGCAAAGCACTCATTGATACCCTTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
CDS-3UTR TCA 90 bp TGCCCTAAACCCAAACAGTTCCCATTCAACTGTGCACAAAGGTATAGATATGGAACCAACTTCCCCACTTaGCCTCCCACCAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: CPKPKQFPFNCAQRYRYGTNFPT*PPTSSC
Trigger: ACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGT...TCCATATCTATACCTTTGTGCACAGTTGAATGGGAACTGTTTGGGTTTAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR TCA 90 bp TGTGCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAACCAACTTCCCCACTTaGCCTCCCACCAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: CAQRYRYGRHLTPTLTFGTNFPT*PPTSSC
Trigger: ACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGT...TCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR TCA 90 bp CCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGTCATTGCAAAGCGCATaGTTTGCCTCTTCACAAAAA +
Preference number: 4 (lower is better)
Translates to: PASSLSCTLQLTGLIYGKSLQSA*FASSQK
Trigger: TTTTTGTGAAGAGGCAAATCATGCGCTTTGCAATGA...CTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp AACTGTGCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGATACAGTCTGGGCCTaGTGGGCCAGATGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: NCAQRYRYGRHLTPTLTFDTVWA*WARCSE
Trigger: CTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATC...AAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGCACAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp GTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGTCCTTCAGCTCCATAAAGTCAGACCAGTaGATTGGGCTTGTTAGGGGA +
Preference number: 4 (lower is better)
Translates to: VLHIATDWLNLRQESFSSIKSDQ*IGLVRG
Trigger: TCCCCTAACAAGCCCAATGCACTGGTCTGACTTTAT...GGAGCTGAAGGACTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp GGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCGCAAAGCGCATGATTTaGCTCTTCACAAAAATAAAT +
Preference number: 4 (lower is better)
Translates to: GPASSLSCTLQLTGLIYGAKRMI*LFTKIN
Trigger: ATTTATTTTTGTGAAGAGGCAAATCATGCGCTTTGC...GCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGTCCTTCAGCCACATTGCAACTGACTaGCTTAATCTACGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: PVLHIATDWLNLRQESFSHIATD*LNLRQE
Trigger: CTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTG...GCTGAAGGACTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp GACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGATACAACGGGAACTTaGATGGATACAGTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: DTSSKNSGYNGNLDGYSLDTTGT*MDTVWA
Trigger: GGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATC...CAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp GATCCTTGCATGTCAGGAAAGCTGCAACACATCTGGTTTAAGTGGAGCACAAAGGATACAACGGGAACTTaGATGGATACAGTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: DPCMSGKLQHIWFKWSTKDTTGT*MDTVWA
Trigger: GGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATC...CTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTTTCCTGACATGCAAGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp AGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCCACATCTGGTTTAAGTaGAGCACAAAGGTAAGTTAT +
Preference number: 4 (lower is better)
Translates to: RTLDTTGTWMDTVWACWAHIWFK*STKVSY
Trigger: ATAACTTACCTTTGTGCTCCACTTAAACCAGATGTG...GGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp TACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGACACATCTGGTTTAAGTaGAGCACAAAGGTAAGTTAT +
Preference number: 4 (lower is better)
Translates to: YNGNLDGYSLGLLGQMFRHIWFK*STKVSY
Trigger: ATAACTTACCTTTGTGCTCCACTTAAACCAGATGTG...TCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp CCTTTAGACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTGGATGGATACCCTCTTTCAAGTCCTTaGGGGCATTGTGTCCCACAG +
Preference number: 4 (lower is better)
Translates to: PLDTSSKNSGYNGNLDGYPLSSP*GHCVPQ
Trigger: CTGTGGGACACAATGCCCCCAAGGACTTGAAAGAGG...GTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGTCTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
CDS-3UTR CCA 90 bp TTGTTTATATGCTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTACTTCCAAACTCACGCAGTaGCCAGCTCACTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LFICFMKVTALWQQSNTTSKLTQ*PAHSGP
Trigger: AGGCCCTGAGTGAGCTGGCCACTGCGTGAGTTTGGA...AGTAGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR TCA 90 bp TCTAAGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGTCATACTTGATATCCTaGACCCTGGAGAGTCGAATA +
Preference number: 4 (lower is better)
Translates to: SKNSGYNGNLDGYSLGLLSYLIS*TLESRI
Trigger: TATTCGACTCTCCAGGGTTCAGGATATCAAGTATGA...CAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp GTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGTCCTTCAGCTCCTCATACTTGATATCCTaGACCCTGGAGAGTCGAATA +
Preference number: 4 (lower is better)
Translates to: VLHIATDWLNLRQESFSSSYLIS*TLESRI
Trigger: TATTCGACTCTCCAGGGTTCAGGATATCAAGTATGA...GGAGCTGAAGGACTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp GATCCTTGCATGTCAGGAAAGCTGCAACACATCTGGTTTAAGTGGAGCACAAAGCCAAAAGGGTATCAATaGGTGCTTTGCGTACACCCT +
Preference number: 4 (lower is better)
Translates to: DPCMSGKLQHIWFKWSTKPKGYQ*VLCVHP
Trigger: AGGGTGTACGCAAAGCACTCATTGATACCCTTTTGG...CTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTTTCCTGACATGCAAGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR TCA 90 bp GCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAATTGAGACCTCAGGGGACTaGGTTAGGTCTTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: AQRYRYGRHLTPTLTFGIETSGD*VRSLAA
Trigger: AGCAGCCAAAGACCTAACTCAGTCCCCTGAGGTCTC...AATTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR TCA 90 bp GTCTTAGCCAATGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACCCTTGAGACCTCAGGGGACTaGGTTAGGTCTTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VLANVLKMLIRKGWGITLETSGD*VRSLAA
Trigger: AGCAGCCAAAGACCTAACTCAGTCCCCTGAGGTCTC...AAGGGTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACATTGGCTAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp TGGATTTTGTTTATATGCTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACTGTCCCACAGGGACATaGGGTCCCCTTCGAGATTTC +
Preference number: 4 (lower is better)
Translates to: WILFICFMKVTALWQQSNCPTGT*GPLRDF
Trigger: GAAATCTCGAAGGGGACCTCATGTCCCTGTGGGACA...GTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAAAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368518.5
CDS-3UTR GCA 90 bp AAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGTCCAAGGGTATCAATGAGTaGTTTGCGTACACCCTTGAA +
Preference number: 4 (lower is better)
Translates to: KQPVLHIATDWLNLRQESKGINE*FAYTLE
Trigger: TTCAAGGGTGTACGCAAAGCACTCATTGATACCCTT...GGACTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp TGGTTTAAGTGGAGCACAAAGGTAAGTTATTCCACATTCACCAACTTCCCCACTGCAAGCAGCCTGTCTTaGACATTGCAACTGACTGGC +
Preference number: 4 (lower is better)
Translates to: WFKWSTKVSYSTFTNFPTASSLS*TLQLTG
Trigger: GCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGC...AGTGGGGAAGTTGGTGAATGTGGAATAACTTACCTTTGTGCTCCACTTAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp AAACCCAAACAGTTCCCATTCAACTGTGCACAAAGGTATAGATATGGAAGACATGATACAGTCTGGGCCTaGTGGGCCAGATGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: KPKQFPFNCAQRYRYGRHDTVWA*WARCSE
Trigger: CTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATC...ATGTCTTCCATATCTATACCTTTGTGCACAGTTGAATGGGAACTGTTTGGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp AGTGCTTGGCACGTTTACTCTTCTGACTGGAGGGGAGGTATGTCACCTGGATGGATTAAAGTAGATCCTTaGATGTCAGGAAAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: SAWHVYSSDWRGGMSPGWIKVDP*MSGKLQ
Trigger: TTGCAGCTTTCCTGACATGCAAGGATCTACTTTAAT...CCATCCAGGTGACATACCTCCCCTCCAGTCAGAAGAGTAAACGTGCCAAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp TGTGCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGACGTAGGTACTCATTCTaGCCAAAGACCCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: CAQRYRYGRHLTPTLTFGRRYSF*PKTPVP
Trigger: TGGGACAGGGGTCTTTGGCCAGAATGAGTACCTACG...TCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp AAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAATTAAATACAGTCTGGGCCTGCTaGGCCAGATGTTCCGAGGGC +
Preference number: 4 (lower is better)
Translates to: KGIDMEDISLQLSPLELNTVWAC*ARCSEG
Trigger: GCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGT...ATTTAATTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp TGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACCCTTTAGACACAAGCTGGATGGATACAGTCTaGGCCTGCTGGGCCAGATGT +
Preference number: 4 (lower is better)
Translates to: CSKNAHKEGLGNYPLDTSWMDTV*ACWARC
Trigger: ACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCA...GCTTGTGTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTACTGTACCAGCTCCGCCTTCAGAATGAAATaGGATCTCAGAGGTACGAAT +
Preference number: 4 (lower is better)
Translates to: LYEGHCTVATVQHYCTSSAFRMK*DLRGTN
Trigger: ATTCGTACCTCTGAGATCCCATTTCATTCTGAAGGC...GGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CCA 90 bp ATTTTGTTTATATGCTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTTCCAAACTCACGCAGTaGCCAGCTCACTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: ILFICFMKVTALWQQSNTSKLTQ*PAHSGP
Trigger: AGGCCCTGAGTGAGCTGGCCACTGCGTGAGTTTGGA...AGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CCA 90 bp TGGATTTTGTTTATATGCTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACATAATGGCACGATCTTaGCTCACCGCAACCTCCGCC +
Preference number: 4 (lower is better)
Translates to: WILFICFMKVTALWQQSNIMARS*LTATSA
Trigger: GGCGGAGGTTGCGGTGAGCCAAGATCGTGCCATTAT...GTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAAAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368518.5
CDS-3UTR TCA 90 bp CTCCAATGTGTTATAGTTATCCTTAAAGCTCTTCAATTCAAGGAAGTGCTTGGCGAGACCTCAGGGGACTaGGTTAGGTCTTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LQCVIVILKALQFKEVLGETSGD*VRSLAA
Trigger: AGCAGCCAAAGACCTAACTCAGTCCCCTGAGGTCTC...GCCAAGCACTTCCTTGAATTGAAGAGCTTTAAGGATAACTATAACACATTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp TGGTTTAAGTGGAGCACAAAGGTAAGTTATTCCACATTCACCAACTTCCCCACTTGCCGGCCTTCAGAATaGAATGGGATCTCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: WFKWSTKVSYSTFTNFPTCRPSE*NGISEV
Trigger: TACCTCTGAGATCCCATTTCATTCTGAAGGCCGGCA...AGTGGGGAAGTTGGTGAATGTGGAATAACTTACCTTTGTGCTCCACTTAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350592.7
ENST00000368521.10
ENST00000648267.1
CDS-3UTR TCA 90 bp CCAACTTCCCCACTTGACCTCCCACCAGTTCCTGTCTGCTTTTTCCATCAATCATCATTGCAAAGCGCATaGTTTGCCTCTTCACAAAAA +
Preference number: 4 (lower is better)
Translates to: PTSPLDLPPVPVCFFHQSSLQSA*FASSQK
Trigger: TTTTTGTGAAGAGGCAAATCATGCGCTTTGCAATGA...TGATTGATGGAAAAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR TCA 90 bp ATTTTGTTTATATGCTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTTGTACCAGCTCCCTCTaGCACGTTCCCCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: ILFICFMKVTALWQQSNTCTSSL*HVPLQT
Trigger: AGTTTGGAGGGGAACGTGTCAGAGGGAGCTGGTACA...AGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR GCA 90 bp GTCTTAGCCAATGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACCCTTAGAGCTCCCAATTCGTaGTTTAACCGCAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: VLANVLKMLIRKGWGITLRAPNS*FNRSGQ
Trigger: CTGGCCACTGCGGTTAAAGCACGAATTGGGAGCTCT...AAGGGTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACATTGGCTAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp CAACTGACTGGCTTAATCTACGGCAAGAGTCCTTCAGCTCCGTCACAGAGTACTTTCAATTCAAGGAAGTaGTTGGCACGTTTACTCTTC +
Preference number: 4 (lower is better)
Translates to: QLTGLIYGKSPSAPSQSTFNSRK*LARLLF
Trigger: GAAGAGTAAACGTGCCAAGCACTTCCTTGAATTGAA...AGTACTCTGTGACGGAGCTGAAGGACTCTTGCCGTAGATTAAGCCAGTCAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp TGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACCCTTTAGACACAAGCGCAAGCAGCCTGTCTTaGACATTGCAACTGACTGGC +
Preference number: 4 (lower is better)
Translates to: CSKNAHKEGLGNYPLDTSASSLS*TLQLTG
Trigger: GCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGC...GCTTGTGTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp CAATTCAAGGAAGTGCTTGGCACGTTTACTCTTCTGACTGGAGGGGAGGTATGTCCACCAGTTCCTGTCTaGTTTTTCCATCAATCAACT +
Preference number: 4 (lower is better)
Translates to: QFKEVLGTFTLLTGGEVCPPVPV*FFHQST
Trigger: AGTTGATTGATGGAAAAAGCAGACAGGAACTGGTGG...ACATACCTCCCCTCCAGTCAGAAGAGTAAACGTGCCAAGCACTTCCTTGAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp AAGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCGCAGATTATATCAGGTaGCAAAACATTCCCTTTTAT +
Preference number: 4 (lower is better)
Translates to: KNSGYNGNLDGYSLGLLGADYIR*QNIPFY
Trigger: ATAAAAGGGAATGTTTTGGCACCTGATATAATCTGC...GCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp TGGCAACAGTCCAACACTACTGTACCAGCTCCCTCTGACACGTTCCCCTCCAAAGCAAAGCGCATGATTTaGCTCTTCACAAAAATAAAT +
Preference number: 4 (lower is better)
Translates to: WQQSNTTVPAPSDTFPSKAKRMI*LFTKIN
Trigger: ATTTATTTTTGTGAAGAGGCAAATCATGCGCTTTGC...TTTGGAGGGGAACGTGTCAGAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368518.5
CDS-3UTR CCA 90 bp TGGATTTTGTTTATATGCTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACCGTAGGTACTCATTCTaGCCAAAGACCCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: WILFICFMKVTALWQQSNRRYSF*PKTPVP
Trigger: TGGGACAGGGGTCTTTGGCCAGAATGAGTACCTACG...GTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAAAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CCA 90 bp TTGTTTATATGCTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTACTCGTAGGTACTCATTCTaGCCAAAGACCCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: LFICFMKVTALWQQSNTTRRYSF*PKTPVP
Trigger: TGGGACAGGGGTCTTTGGCCAGAATGAGTACCTACG...AGTAGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CCA 90 bp AATTACCCTTTAGACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTGGATCGTAGGTACTCATTCTaGCCAAAGACCCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: NYPLDTSSKNSGYNGNLDRRYSF*PKTPVP
Trigger: TGGGACAGGGGTCTTTGGCCAGAATGAGTACCTACG...ATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGTCTAAAGGGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp CCTTCCTACTGTCACATAGCCTGGCAGATTATATCAGGTGCCAAAACATTCCCTCACATTGCAACTGACTaGCTTAATCTACGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: PSYCHIAWQIISGAKTFPHIATD*LNLRQE
Trigger: CTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTG...AGGGAATGTTTTGGCACCTGATATAATCTGCCAGGCTATGTGACAGTAGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp TGTCACATAGCCTGGCAGATTATATCAGGTGCCAAAACATTCCCTTTTATTCAATGGATGGATACAGTCTaGGCCTGCTGGGCCAGATGT +
Preference number: 4 (lower is better)
Translates to: CHIAWQIISGAKTFPFIQWMDTV*ACWARC
Trigger: ACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCA...TTGAATAAAAGGGAATGTTTTGGCACCTGATATAATCTGCCAGGCTATGTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp AGCCAATGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACCCTTTAGACCAACGGGAACTTGGATaGATACAGTCTGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SQCSKNAHKEGLGNYPLDQRELG*IQSGPA
Trigger: AGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTG...GTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACATTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp CAACACATCTGGTTTAAGTGGAGCACAAAGGTAAGTTATTCCACATTCACCAACCAACGGGAACTTGGATaGATACAGTCTGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: QHIWFKWSTKVSYSTFTNQRELG*IQSGPA
Trigger: AGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTG...GTTGGTGAATGTGGAATAACTTACCTTTGTGCTCCACTTAAACCAGATGTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp ACTCTAAGATGCCCTAAACCCAAACAGTTCCCATTCAACTGTGCACAAAGGTATGATACAACGGGAACTTaGATGGATACAGTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TLRCPKPKQFPFNCAQRYDTTGT*MDTVWA
Trigger: GGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATC...ATACCTTTGTGCACAGTTGAATGGGAACTGTTTGGGTTTAGGGCATCTTAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp TGTGGAATTAAAGTAGATCCTTGCATGTCAGGAAAGCTGCAACACATCTGGTTTCCTCTTTCAAGTCCTTaGGGGCATTGTGTCCCACAG +
Preference number: 4 (lower is better)
Translates to: CGIKVDPCMSGKLQHIWFPLSSP*GHCVPQ
Trigger: CTGTGGGACACAATGCCCCCAAGGACTTGAAAGAGG...AAACCAGATGTGTTGCAGCTTTCCTGACATGCAAGGATCTACTTTAATTCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368521.10
ENST00000470180.2
3UTR CAA 72 bp AAAGGTAAGTTATTCCACATTCACCAACTTCCCCACTaGACCTCCCACCAGTTCCTGTCTGCTTTTTCCATC +
Preference number: 4 (lower is better)
Translates to: KGKLFHIHQLPH*TSHQFLSAFSI
Trigger: GATGGAAAAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTGAATGTGGAATAACTTACCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR TCA 90 bp ACTCTAAGATGCCCTAAACCCAAACAGTTCCCATTCAACTGTGCACAAAGGTATCCAAAAGGGTATCAATaGGTGCTTTGCGTACACCCT +
Preference number: 4 (lower is better)
Translates to: TLRCPKPKQFPFNCAQRYPKGYQ*VLCVHP
Trigger: AGGGTGTACGCAAAGCACTCATTGATACCCTTTTGG...ATACCTTTGTGCACAGTTGAATGGGAACTGTTTGGGTTTAGGGCATCTTAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR TCA 90 bp TTTATAAAGTCAGACCAGTGCATTGGGCTTGTTAGGGGAAACCATTCCTTCCTACCAAAAGGGTATCAATaGGTGCTTTGCGTACACCCT +
Preference number: 4 (lower is better)
Translates to: FIKSDQCIGLVRGNHSFLPKGYQ*VLCVHP
Trigger: AGGGTGTACGCAAAGCACTCATTGATACCCTTTTGG...TAGGAAGGAATGGTTTCCCCTAACAAGCCCAATGCACTGGTCTGACTTTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR TCA 90 bp TCTAAGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGAAGGTGAACTATGGCTaGAACCAAGTGAAGATTTTT +
Preference number: 4 (lower is better)
Translates to: SKNSGYNGNLDGYSLGLLKVNYG*NQVKIF
Trigger: AAAAATCTTCACTTGGTTTCAGCCATAGTTCACCTT...CAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp TTGTTTATATGCTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTACTTGCCGGCCTTCAGAATaGAATGGGATCTCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: LFICFMKVTALWQQSNTTCRPSE*NGISEV
Trigger: TACCTCTGAGATCCCATTTCATTCTGAAGGCCGGCA...AGTAGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR GCA 90 bp GCCCTAAACCCAAACAGTTCCCATTCAACTGTGCACAAAGGTATAGATATGGAATCTAGCATCATCATCTaGAAGGAGCTGGGGCTCATA +
Preference number: 4 (lower is better)
Translates to: ALNPNSSHSTVHKGIDMESSIII*KELGLI
Trigger: TATGAGCCCCAGCTCCTTGCAGATGATGATGCTAGA...TTCCATATCTATACCTTTGTGCACAGTTGAATGGGAACTGTTTGGGTTTAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp TGGTTTAAGTGGAGCACAAAGGTAAGTTATTCCACATTCACCAACTTCCCCACTAGGAGCGGAAATTCTTaGCCATTAAGGAACGGGGAT +
Preference number: 4 (lower is better)
Translates to: WFKWSTKVSYSTFTNFPTRSGNS*PLRNGD
Trigger: ATCCCCGTTCCTTAATGGGCAAGAATTTCCGCTCCT...AGTGGGGAAGTTGGTGAATGTGGAATAACTTACCTTTGTGCTCCACTTAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp AAAAGGGTATCAATGAGTGCTTTGCGTACACCCTTGAAAGGCGTACTAGTGTTTAGGAGCGGAAATTCTTaGCCATTAAGGAACGGGGAT +
Preference number: 4 (lower is better)
Translates to: KRVSMSALRTPLKGVLVFRSGNS*PLRNGD
Trigger: ATCCCCGTTCCTTAATGGGCAAGAATTTCCGCTCCT...AAACACTAGTACGCCTTTCAAGGGTGTACGCAAAGCACTCATTGATACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp GATCCTTGCATGTCAGGAAAGCTGCAACACATCTGGTTTAAGTGGAGCACAAAGAAGGGTATCAATGAGTaGTTTGCGTACACCCTTGAA +
Preference number: 4 (lower is better)
Translates to: DPCMSGKLQHIWFKWSTKKGINE*FAYTLE
Trigger: TTCAAGGGTGTACGCAAAGCACTCATTGATACCCTT...CTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTTTCCTGACATGCAAGGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp TGTCACATAGCCTGGCAGATTATATCAGGTGCCAAAACATTCCCTTTTATTCAAAGAGCTCCCAATTCGTaGTTTAACCGCAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: CHIAWQIISGAKTFPFIQRAPNS*FNRSGQ
Trigger: CTGGCCACTGCGGTTAAAGCACGAATTGGGAGCTCT...TTGAATAAAAGGGAATGTTTTGGCACCTGATATAATCTGCCAGGCTATGTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp GTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGTCCTTCAGCTCCATTAAAGTAGATCCTTaGATGTCAGGAAAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: VLHIATDWLNLRQESFSSIKVDP*MSGKLQ
Trigger: TTGCAGCTTTCCTGACATGCAAGGATCTACTTTAAT...GGAGCTGAAGGACTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp TGGTTTAAGTGGAGCACAAAGGTAAGTTATTCCACATTCACCAACTTCCCCACTTCATCTGCAAGGAGCTaGGGCTCATACTTGATATCC +
Preference number: 4 (lower is better)
Translates to: WFKWSTKVSYSTFTNFPTSSARS*GSYLIS
Trigger: GGATATCAAGTATGAGCCCCAGCTCCTTGCAGATGA...AGTGGGGAAGTTGGTGAATGTGGAATAACTTACCTTTGTGCTCCACTTAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp TGGTTTAAGTGGAGCACAAAGGTAAGTTATTCCACATTCACCAACTTCCCCACTACTGAGTTAGGTCTTTaGCTGCTGACTGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: WFKWSTKVSYSTFTNFPTTELGL*LLTGDV
Trigger: GACATCACCAGTCAGCAGCCAAAGACCTAACTCAGT...AGTGGGGAAGTTGGTGAATGTGGAATAACTTACCTTTGTGCTCCACTTAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp TCACAGAGTACTCTCCAATGTGTTATAGTTATCCTTAAAGCTCTTCAATTCAAGCACCTGGATGGTTGTTaGGGAGACCTCAGGGGACTG +
Preference number: 4 (lower is better)
Translates to: SQSTLQCVIVILKALQFKHLDGC*GDLRGL
Trigger: CAGTCCCCTGAGGTCTCCCCAACAACCATCCAGGTG...CTTGAATTGAAGAGCTTTAAGGATAACTATAACACATTGGAGAGTACTCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp ACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGATTCAAGGAAGTGCTTaGCACGTTTACTCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: TQALRTLDTTGTWMDTVWIQGSA*HVYSSD
Trigger: GTCAGAAGAGTAAACGTGCCAAGCACTTCCTTGAAT...CCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp AAGCTGCAACACATCTGGTTTAAGTGGAGCACAAAGGTAAGTTATTCCACATTCGATACAACGGGAACTTaGATGGATACAGTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KLQHIWFKWSTKVSYSTFDTTGT*MDTVWA
Trigger: GGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATC...GAATGTGGAATAACTTACCTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp AATTACCCTTTAGACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTGGATGATACAACGGGAACTTaGATGGATACAGTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: NYPLDTSSKNSGYNGNLDDTTGT*MDTVWA
Trigger: GGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATC...ATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGTCTAAAGGGTAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp GACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGAGGGAAGGTGAACTATaGCTGAAACCAAGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: DTSSKNSGYNGNLDGYSLREGEL*LKPSED
Trigger: ATCTTCACTTGGTTTCAGCCATAGTTCACCTTCCCT...CAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp GCCCTAAACCCAAACAGTTCCCATTCAACTGTGCACAAAGGTATAGATATGGAATCTCAGAGGTACGAATaGCATCCAGAGCTTTCATCC +
Preference number: 4 (lower is better)
Translates to: ALNPNSSHSTVHKGIDMESQRYE*HPELSS
Trigger: GGATGAAAGCTCTGGATGCCATTCGTACCTCTGAGA...TTCCATATCTATACCTTTGTGCACAGTTGAATGGGAACTGTTTGGGTTTAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350592.7
ENST00000368521.10
ENST00000648267.1
CDS-3UTR TCA 90 bp TTGTTTATATGCTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTACTCCAAAAGGGTATCAATaGGTGCTTTGCGTACACCCT +
Preference number: 4 (lower is better)
Translates to: LFICFMKVTALWQQSNTTPKGYQ*VLCVHP
Trigger: AGGGTGTACGCAAAGCACTCATTGATACCCTTTTGG...AGTAGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR TCA 90 bp GGAATTAAAGTAGATCCTTGCATGTCAGGAAAGCTGCAACACATCTGGTTTAAGCCAAAAGGGTATCAATaGGTGCTTTGCGTACACCCT +
Preference number: 4 (lower is better)
Translates to: GIKVDPCMSGKLQHIWFKPKGYQ*VLCVHP
Trigger: AGGGTGTACGCAAAGCACTCATTGATACCCTTTTGG...CTTAAACCAGATGTGTTGCAGCTTTCCTGACATGCAAGGATCTACTTTAATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR TCA 90 bp TCACAGAGTACTCTCCAATGTGTTATAGTTATCCTTAAAGCTCTTCAATTCAAGGAGACCTCAGGGGACTaGGTTAGGTCTTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SQSTLQCVIVILKALQFKETSGD*VRSLAA
Trigger: AGCAGCCAAAGACCTAACTCAGTCCCCTGAGGTCTC...CTTGAATTGAAGAGCTTTAAGGATAACTATAACACATTGGAGAGTACTCTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp AGTACTCTCCAATGTGTTATAGTTATCCTTAAAGCTCTTCAATTCAAGGAAGTGACCAACTTCCCCACTTaGCCTCCCACCAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: STLQCVIVILKALQFKEVTNFPT*PPTSSC
Trigger: ACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGT...CACTTCCTTGAATTGAAGAGCTTTAAGGATAACTATAACACATTGGAGAGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp AACTGTGCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTTCTAGCATCATCATCTaGAAGGAGCTGGGGCTCATA +
Preference number: 4 (lower is better)
Translates to: NCAQRYRYGRHLTPTLTFSSIII*KELGLI
Trigger: TATGAGCCCCAGCTCCTTGCAGATGATGATGCTAGA...AAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGCACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp TTGTTTATATGCTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTACTTCTAGCATCATCATCTaGAAGGAGCTGGGGCTCATA +
Preference number: 4 (lower is better)
Translates to: LFICFMKVTALWQQSNTTSSIII*KELGLI
Trigger: TATGAGCCCCAGCTCCTTGCAGATGATGATGCTAGA...AGTAGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR GCA 90 bp CCTTTAGACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTGGATGGATACAAGGGTATCAATGAGTaGTTTGCGTACACCCTTGAA +
Preference number: 4 (lower is better)
Translates to: PLDTSSKNSGYNGNLDGYKGINE*FAYTLE
Trigger: TTCAAGGGTGTACGCAAAGCACTCATTGATACCCTT...GTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGTCTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp AATAGTCTTAGCCAATGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACAGAGCTCCCAATTCGTaGTTTAACCGCAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: NSLSQCSKNAHKEGLGNYRAPNS*FNRSGQ
Trigger: CTGGCCACTGCGGTTAAAGCACGAATTGGGAGCTCT...GTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACATTGGCTAAGACTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp CAATCAACTCTAAGATGCCCTAAACCCAAACAGTTCCCATTCAACTGTGCACAAATAAAGTCAGACCAGTaGATTGGGCTTGTTAGGGGA +
Preference number: 4 (lower is better)
Translates to: QSTLRCPKPKQFPFNCAQIKSDQ*IGLVRG
Trigger: TCCCCTAACAAGCCCAATGCACTGGTCTGACTTTAT...TTGTGCACAGTTGAATGGGAACTGTTTGGGTTTAGGGCATCTTAGAGTTGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp TGTGCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAATAAAGTCAGACCAGTaGATTGGGCTTGTTAGGGGA +
Preference number: 4 (lower is better)
Translates to: CAQRYRYGRHLTPTLTFGIKSDQ*IGLVRG
Trigger: TCCCCTAACAAGCCCAATGCACTGGTCTGACTTTAT...TCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp TGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACCCTTTAGACACAAGCGTTTACTCTTCTGACTaGAGGGGAGGTATGTCACCT +
Preference number: 4 (lower is better)
Translates to: CSKNAHKEGLGNYPLDTSVYSSD*RGGMSP
Trigger: AGGTGACATACCTCCCCTCCAGTCAGAAGAGTAAAC...GCTTGTGTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp GGAATTAAAGTAGATCCTTGCATGTCAGGAAAGCTGCAACACATCTGGTTTAAGGTTTACTCTTCTGACTaGAGGGGAGGTATGTCACCT +
Preference number: 4 (lower is better)
Translates to: GIKVDPCMSGKLQHIWFKVYSSD*RGGMSP
Trigger: AGGTGACATACCTCCCCTCCAGTCAGAAGAGTAAAC...CTTAAACCAGATGTGTTGCAGCTTTCCTGACATGCAAGGATCTACTTTAATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp TGGATTTTGTTTATATGCTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACTCTCAGAGGTACGAATaGCATCCAGAGCTTTCATCC +
Preference number: 4 (lower is better)
Translates to: WILFICFMKVTALWQQSNSQRYE*HPELSS
Trigger: GGATGAAAGCTCTGGATGCCATTCGTACCTCTGAGA...GTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAAAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CCA 90 bp AGCCAATGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACCCTTTAGACTCTCAGAGGTACGAATaGCATCCAGAGCTTTCATCC +
Preference number: 4 (lower is better)
Translates to: SQCSKNAHKEGLGNYPLDSQRYE*HPELSS
Trigger: GGATGAAAGCTCTGGATGCCATTCGTACCTCTGAGA...GTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACATTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350592.7
ENST00000368521.10
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp ACCATTCCTTCCTACTGTCACATAGCCTGGCAGATTATATCAGGTGCCAAAACAGCCTTCAGAATGAAATaGGATCTCAGAGGTACGAAT +
Preference number: 4 (lower is better)
Translates to: TIPSYCHIAWQIISGAKTAFRMK*DLRGTN
Trigger: ATTCGTACCTCTGAGATCCCATTTCATTCTGAAGGC...TGTTTTGGCACCTGATATAATCTGCCAGGCTATGTGACAGTAGGAAGGAATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350592.7
ENST00000368521.10
ENST00000648267.1
CDS-3UTR CCA 90 bp TGGATTTTGTTTATATGCTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACAAGGTCACTGCACTGTaGCAACAGTCCAACACTACT +
Preference number: 4 (lower is better)
Translates to: WILFICFMKVTALWQQSNKVTAL*QQSNTT
Trigger: AGTAGTGTTGGACTGTTGCCACAGTGCAGTGACCTT...GTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAAAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CCA 90 bp TTGTTTATATGCTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTACTAAGGTCACTGCACTGTaGCAACAGTCCAACACTACT +
Preference number: 4 (lower is better)
Translates to: LFICFMKVTALWQQSNTTKVTAL*QQSNTT
Trigger: AGTAGTGTTGGACTGTTGCCACAGTGCAGTGACCTT...AGTAGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR TCA 90 bp ATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAATTAAATAAACCTGCTGGGGCTCATACTTaGTATCCTGAACCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: IDMEDISLQLSPLELNKPAGAHT*YPEPWR
Trigger: TCTCCAGGGTTCAGGATATCAAGTATGAGCCCCAGC...AGGTTTATTTAATTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR TCA 90 bp ATTTTGTTTATATGCTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTCCAAAAGGGTATCAATaGGTGCTTTGCGTACACCCT +
Preference number: 4 (lower is better)
Translates to: ILFICFMKVTALWQQSNTPKGYQ*VLCVHP
Trigger: AGGGTGTACGCAAAGCACTCATTGATACCCTTTTGG...AGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR TCA 90 bp TGTCACATAGCCTGGCAGATTATATCAGGTGCCAAAACATTCCCTTTTATTCAACCAAAAGGGTATCAATaGGTGCTTTGCGTACACCCT +
Preference number: 4 (lower is better)
Translates to: CHIAWQIISGAKTFPFIQPKGYQ*VLCVHP
Trigger: AGGGTGTACGCAAAGCACTCATTGATACCCTTTTGG...TTGAATAAAAGGGAATGTTTTGGCACCTGATATAATCTGCCAGGCTATGTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR TCA 90 bp CACATAGCCTGGCAGATTATATCAGGTGCCAAAACATTCCCTTTTATTCAATTTTGCCGGCCTTCAGAATaGAATGGGATCTCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: HIAWQIISGAKTFPFIQFCRPSE*NGISEV
Trigger: TACCTCTGAGATCCCATTTCATTCTGAAGGCCGGCA...AAATTGAATAAAAGGGAATGTTTTGGCACCTGATATAATCTGCCAGGCTATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350592.7
ENST00000368521.10
ENST00000648267.1
CDS-3UTR TCA 90 bp AAACCCAAACAGTTCCCATTCAACTGTGCACAAAGGTATAGATATGGAAGACATTGCCGGCCTTCAGAATaGAATGGGATCTCTGTAATC +
Preference number: 4 (lower is better)
Translates to: KPKQFPFNCAQRYRYGRHCRPSE*NGISVI
Trigger: GATTACAGAGATCCCATTTCATTCTGAAGGCCGGCA...ATGTCTTCCATATCTATACCTTTGTGCACAGTTGAATGGGAACTGTTTGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470180.2
CDS-3UTR GCA 90 bp ATTTTGTTTATATGCTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTTCTAGCATCATCATCTaGAAGGAGCTGGGGCTCATA +
Preference number: 4 (lower is better)
Translates to: ILFICFMKVTALWQQSNTSSIII*KELGLI
Trigger: TATGAGCCCCAGCTCCTTGCAGATGATGATGCTAGA...AGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR GCA 90 bp TGTGCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGACCACCAGTTCCTGTCTaGTTTTTCCATCAATCAACT +
Preference number: 4 (lower is better)
Translates to: CAQRYRYGRHLTPTLTFGPPVPV*FFHQST
Trigger: AGTTGATTGATGGAAAAAGCAGACAGGAACTGGTGG...TCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp AGCTCTTCAATTCAAGGAAGTGCTTGGCACGTTTACTCTTCTGACTGGAGGGGAGCAGATTATATCAGGTaGCAAAACATTCCCTTTTAT +
Preference number: 4 (lower is better)
Translates to: SSSIQGSAWHVYSSDWRGADYIR*QNIPFY
Trigger: ATAAAAGGGAATGTTTTGGCACCTGATATAATCTGC...TCCCCTCCAGTCAGAAGAGTAAACGTGCCAAGCACTTCCTTGAATTGAAGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp TTGTTTATATGCTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTACTCTTTATGAAGGTCACTaGACTGTGGCAACAGTCCAA +
Preference number: 4 (lower is better)
Translates to: LFICFMKVTALWQQSNTTLYEGH*TVATVQ
Trigger: TTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAG...AGTAGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CCA 90 bp AAACCCAAACAGTTCCCATTCAACTGTGCACAAAGGTATAGATATGGAAGACATACTGAGTTAGGTCTTTaGCTGCTGACTGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: KPKQFPFNCAQRYRYGRHTELGL*LLTGDV
Trigger: GACATCACCAGTCAGCAGCCAAAGACCTAACTCAGT...ATGTCTTCCATATCTATACCTTTGTGCACAGTTGAATGGGAACTGTTTGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp CAATCAACTCTAAGATGCCCTAAACCCAAACAGTTCCCATTCAACTGTGCACAAAGGGAAGGTGAACTATaGCTGAAACCAAGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: QSTLRCPKPKQFPFNCAQREGEL*LKPSED
Trigger: ATCTTCACTTGGTTTCAGCCATAGTTCACCTTCCCT...TTGTGCACAGTTGAATGGGAACTGTTTGGGTTTAGGGCATCTTAGAGTTGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp TTTATAAAGTCAGACCAGTGCATTGGGCTTGTTAGGGGAAACCATTCCTTCCTAAGGGAAGGTGAACTATaGCTGAAACCAAGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: FIKSDQCIGLVRGNHSFLREGEL*LKPSED
Trigger: ATCTTCACTTGGTTTCAGCCATAGTTCACCTTCCCT...TAGGAAGGAATGGTTTCCCCTAACAAGCCCAATGCACTGGTCTGACTTTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp GGAAACCATTCCTTCCTACTGTCACATAGCCTGGCAGATTATATCAGGTGCCAACACATCTGGTTTAAGTaGAGCACAAAGGTAAGTTAT +
Preference number: 4 (lower is better)
Translates to: GNHSFLLSHSLADYIRCQHIWFK*STKVSY
Trigger: ATAACTTACCTTTGTGCTCCACTTAAACCAGATGTG...TTGGCACCTGATATAATCTGCCAGGCTATGTGACAGTAGGAAGGAATGGTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp GCCTTCAGAATGAAATGGGATCTCAGAGGTACGAATGGCATCCAGAGCTTTCATCACATCTGGTTTAAGTaGAGCACAAAGGTAAGTTAT +
Preference number: 4 (lower is better)
Translates to: AFRMKWDLRGTNGIQSFHHIWFK*STKVSY
Trigger: ATAACTTACCTTTGTGCTCCACTTAAACCAGATGTG...ATGAAAGCTCTGGATGCCATTCGTACCTCTGAGATCCCATTTCATTCTGAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648267.1
CDS-3UTR CCA 90 bp TGTGCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAAAGCTGCAACACATCTaGTTTAAGTGGAGCACAAAG +
Preference number: 4 (lower is better)
Translates to: CAQRYRYGRHLTPTLTFGKLQHI*FKWSTK
Trigger: CTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTT...TCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp GCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAATTTACTGTCACATAGCCTaGCAGATTATATCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: AQRYRYGRHLTPTLTFGIYCHIA*QIISGA
Trigger: GGCACCTGATATAATCTGCCAGGCTATGTGACAGTA...AATTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp AACTGTGCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTTACTGTCACATAGCCTaGCAGATTATATCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: NCAQRYRYGRHLTPTLTFYCHIA*QIISGA
Trigger: GGCACCTGATATAATCTGCCAGGCTATGTGACAGTA...AAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGCACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp AAACCCAAACAGTTCCCATTCAACTGTGCACAAAGGTATAGATATGGAAGACATTCTCAGAGGTACGAATaGCATCCAGAGCTTTCATCC +
Preference number: 4 (lower is better)
Translates to: KPKQFPFNCAQRYRYGRHSQRYE*HPELSS
Trigger: GGATGAAAGCTCTGGATGCCATTCGTACCTCTGAGA...ATGTCTTCCATATCTATACCTTTGTGCACAGTTGAATGGGAACTGTTTGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350592.7
ENST00000368521.10
ENST00000648267.1
CDS-3UTR TCA 90 bp AATTACCCTTTAGACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTGGATTCATACTTGATATCCTaGACCCTGGAGAGTCGAATA +
Preference number: 4 (lower is better)
Translates to: NYPLDTSSKNSGYNGNLDSYLIS*TLESRI
Trigger: TATTCGACTCTCCAGGGTTCAGGATATCAAGTATGA...ATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGTCTAAAGGGTAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp TGTGCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGATCATTGCAAAGCGCATaGTTTGCCTCTTCACAAAAA +
Preference number: 4 (lower is better)
Translates to: CAQRYRYGRHLTPTLTFGSLQSA*FASSQK
Trigger: TTTTTGTGAAGAGGCAAATCATGCGCTTTGCAATGA...TCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp TGTGCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGATTCAATTCAAGGAAGTaGTTGGCACGTTTACTCTTC +
Preference number: 4 (lower is better)
Translates to: CAQRYRYGRHLTPTLTFGFNSRK*LARLLF
Trigger: GAAGAGTAAACGTGCCAAGCACTTCCTTGAATTGAA...TCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp AATAGTCTTAGCCAATGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACACTGAGTTAGGTCTTTaGCTGCTGACTGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: NSLSQCSKNAHKEGLGNYTELGL*LLTGDV
Trigger: GACATCACCAGTCAGCAGCCAAAGACCTAACTCAGT...GTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACATTGGCTAAGACTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp AACTGTGCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTATTCAAGGAAGTGCTTaGCACGTTTACTCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: NCAQRYRYGRHLTPTLTFIQGSA*HVYSSD
Trigger: GTCAGAAGAGTAAACGTGCCAAGCACTTCCTTGAAT...AAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGCACAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp AGCCAATGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACCCTTTAGACATTCAAGGAAGTGCTTaGCACGTTTACTCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: SQCSKNAHKEGLGNYPLDIQGSA*HVYSSD
Trigger: GTCAGAAGAGTAAACGTGCCAAGCACTTCCTTGAAT...GTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACATTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp ACGAATGGCATCCAGAGCTTTCATCCTATACAGATAGTTGTAGCAACTTTGATTCACATTGCAACTGACTaGCTTAATCTACGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: TNGIQSFHPIQIVVATLIHIATD*LNLRQE
Trigger: CTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTG...AATCAAAGTTGCTACAACTATCTGTATAGGATGAAAGCTCTGGATGCCATTCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648267.1
CDS-3UTR CCA 90 bp AAGCTGCAACACATCTGGTTTAAGTGGAGCACAAAGGTAAGTTATTCCACATTCAAGCTGCAACACATCTaGTTTAAGTGGAGCACAAAG +
Preference number: 4 (lower is better)
Translates to: KLQHIWFKWSTKVSYSTFKLQHI*FKWSTK
Trigger: CTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTT...GAATGTGGAATAACTTACCTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CCA 90 bp TGTGGAATTAAAGTAGATCCTTGCATGTCAGGAAAGCTGCAACACATCTGGTTTGCCTTCAGAATGAAATaGGATCTCAGAGGTACGAAT +
Preference number: 4 (lower is better)
Translates to: CGIKVDPCMSGKLQHIWFAFRMK*DLRGTN
Trigger: ATTCGTACCTCTGAGATCCCATTTCATTCTGAAGGC...AAACCAGATGTGTTGCAGCTTTCCTGACATGCAAGGATCTACTTTAATTCCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350592.7
ENST00000368521.10
ENST00000648267.1
CDS-3UTR CCA 90 bp ATTTTGTTTATATGCTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTTTTTGTTGCCCAGGCTaGAGTATAATGGCACGATCT +
Preference number: 4 (lower is better)
Translates to: ILFICFMKVTALWQQSNTFCCPG*SIMARS
Trigger: AGATCGTGCCATTATACTCCAGCCTGGGCAACAAAA...AGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368518.5
CDS-3UTR GCA 90 bp AGCCAATGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACCCTTTAGACTTCAATTCAAGGAAGTaGTTGGCACGTTTACTCTTC +
Preference number: 4 (lower is better)
Translates to: SQCSKNAHKEGLGNYPLDFNSRK*LARLLF
Trigger: GAAGAGTAAACGTGCCAAGCACTTCCTTGAATTGAA...GTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACATTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp AGCCAATGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACCCTTTAGACGCCTTCAGAATGAAATaGGATCTTTTGATTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SQCSKNAHKEGLGNYPLDAFRMK*DLLISL
Trigger: CAGGGAAATCAAAAGATCCCATTTCATTCTGAAGGC...GTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACATTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000362076.8
ENST00000368519.5
3UTR CAA 72 bp CTTAGCCAATGTTCTAAAAATGCTCATAAGGAAGGGTaGGGGAATTACCCTTTAGACACAAGCTCTAAGAAC +
Preference number: 4 (lower is better)
Translates to: LSQCSKNAHKEG*GNYPLDTSSKN
Trigger: GTTCTTAGAGCTTGTGTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACATTGGCTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp AGCCAATGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACCCTTTAGACAAGGTGAACTATGGCTaGAACCAAGTGAAGATTTTT +
Preference number: 4 (lower is better)
Translates to: SQCSKNAHKEGLGNYPLDKVNYG*NQVKIF
Trigger: AAAAATCTTCACTTGGTTTCAGCCATAGTTCACCTT...GTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACATTGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp TTGTTTATATGCTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTACTAGGCTACACCAATTTTaGCATTTTATTGGGCTAAAC +
Preference number: 4 (lower is better)
Translates to: LFICFMKVTALWQQSNTTRLHQF*HFIGLN
Trigger: GTTTAGCCCAATAAAATGTCAAAATTGGTGTAGCCT...AGTAGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368518.5
CDS-3UTR GCA 90 bp CACATAGCCTGGCAGATTATATCAGGTGCCAAAACATTCCCTTTTATTCAATTTAAGGGTATCAATGAGTaGTTTGCGTACACCCTTGAA +
Preference number: 4 (lower is better)
Translates to: HIAWQIISGAKTFPFIQFKGINE*FAYTLE
Trigger: TTCAAGGGTGTACGCAAAGCACTCATTGATACCCTT...AAATTGAATAAAAGGGAATGTTTTGGCACCTGATATAATCTGCCAGGCTATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp ACGAATGGCATCCAGAGCTTTCATCCTATACAGATAGTTGTAGCAACTTTGATTTTCAATTCAAGGAAGTaGTTGGCACGTTTACTCTTC +
Preference number: 4 (lower is better)
Translates to: TNGIQSFHPIQIVVATLIFNSRK*LARLLF
Trigger: GAAGAGTAAACGTGCCAAGCACTTCCTTGAATTGAA...AATCAAAGTTGCTACAACTATCTGTATAGGATGAAAGCTCTGGATGCCATTCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648267.1
CDS-3UTR GCA 90 bp ACTCTAAGATGCCCTAAACCCAAACAGTTCCCATTCAACTGTGCACAAAGGTATGCAGATTATATCAGGTaGCAAAACATTCCCTTTTAT +
Preference number: 4 (lower is better)
Translates to: TLRCPKPKQFPFNCAQRYADYIR*QNIPFY
Trigger: ATAAAAGGGAATGTTTTGGCACCTGATATAATCTGC...ATACCTTTGTGCACAGTTGAATGGGAACTGTTTGGGTTTAGGGCATCTTAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp AGTACTCTCCAATGTGTTATAGTTATCCTTAAAGCTCTTCAATTCAAGGAAGTGATAAAGTCAGACCAGTaGATTGGGCTTGTTAGGGGA +
Preference number: 4 (lower is better)
Translates to: STLQCVIVILKALQFKEVIKSDQ*IGLVRG
Trigger: TCCCCTAACAAGCCCAATGCACTGGTCTGACTTTAT...CACTTCCTTGAATTGAAGAGCTTTAAGGATAACTATAACACATTGGAGAGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
CDS-3UTR TCA 90 bp AAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAATTAAATTCATACTTGATATCCTaGACCCTGGAGAGTCGAATA +
Preference number: 4 (lower is better)
Translates to: KGIDMEDISLQLSPLELNSYLIS*TLESRI
Trigger: TATTCGACTCTCCAGGGTTCAGGATATCAAGTATGA...ATTTAATTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp AGTACTCTCCAATGTGTTATAGTTATCCTTAAAGCTCTTCAATTCAAGGAAGTGAAGGGTATCAATGAGTaGTTTGCGTACACCCTTGAA +
Preference number: 4 (lower is better)
Translates to: STLQCVIVILKALQFKEVKGINE*FAYTLE
Trigger: TTCAAGGGTGTACGCAAAGCACTCATTGATACCCTT...CACTTCCTTGAATTGAAGAGCTTTAAGGATAACTATAACACATTGGAGAGTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp TCACAGAGTACTCTCCAATGTGTTATAGTTATCCTTAAAGCTCTTCAATTCAAGCCTTCGAGATTTCATTaGAAAGCGCATGATTTGCCT +
Preference number: 4 (lower is better)
Translates to: SQSTLQCVIVILKALQFKPSRFH*KAHDLP
Trigger: AGGCAAATCATGCGCTTTGCAATGAAATCTCGAAGG...CTTGAATTGAAGAGCTTTAAGGATAACTATAACACATTGGAGAGTACTCTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp TCACAGAGTACTCTCCAATGTGTTATAGTTATCCTTAAAGCTCTTCAATTCAAGAGGGAAGGTGAACTATaGCTGAAACCAAGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: SQSTLQCVIVILKALQFKREGEL*LKPSED
Trigger: ATCTTCACTTGGTTTCAGCCATAGTTCACCTTCCCT...CTTGAATTGAAGAGCTTTAAGGATAACTATAACACATTGGAGAGTACTCTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CCA 90 bp TCACAGAGTACTCTCCAATGTGTTATAGTTATCCTTAAAGCTCTTCAATTCAAGGCCTTCAGAATGAAATaGGATCTCAGAGGTACGAAT +
Preference number: 4 (lower is better)
Translates to: SQSTLQCVIVILKALQFKAFRMK*DLRGTN
Trigger: ATTCGTACCTCTGAGATCCCATTTCATTCTGAAGGC...CTTGAATTGAAGAGCTTTAAGGATAACTATAACACATTGGAGAGTACTCTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp CTCCAATGTGTTATAGTTATCCTTAAAGCTCTTCAATTCAAGGAAGTGCTTGGCGCAAAGCGCATGATTTaGCTCTTCACAAAAATAAAT +
Preference number: 4 (lower is better)
Translates to: LQCVIVILKALQFKEVLGAKRMI*LFTKIN
Trigger: ATTTATTTTTGTGAAGAGGCAAATCATGCGCTTTGC...GCCAAGCACTTCCTTGAATTGAAGAGCTTTAAGGATAACTATAACACATTGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR TCA 90 bp AGTACTCTCCAATGTGTTATAGTTATCCTTAAAGCTCTTCAATTCAAGGAAGTGAAGGTGAACTATGGCTaGAACCAAGTGAAGATTTTT +
Preference number: 4 (lower is better)
Translates to: STLQCVIVILKALQFKEVKVNYG*NQVKIF
Trigger: AAAAATCTTCACTTGGTTTCAGCCATAGTTCACCTT...CACTTCCTTGAATTGAAGAGCTTTAAGGATAACTATAACACATTGGAGAGTACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp AGTACTCTCCAATGTGTTATAGTTATCCTTAAAGCTCTTCAATTCAAGGAAGTGATTAAAGTAGATCCTTaGATGTCAGGAAAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: STLQCVIVILKALQFKEVIKVDP*MSGKLQ
Trigger: TTGCAGCTTTCCTGACATGCAAGGATCTACTTTAAT...CACTTCCTTGAATTGAAGAGCTTTAAGGATAACTATAACACATTGGAGAGTACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp CACATAGCCTGGCAGATTATATCAGGTGCCAAAACATTCCCTTTTATTCAATTTGCAGATTATATCAGGTaGCAAAACATTCCCTTTTAT +
Preference number: 4 (lower is better)
Translates to: HIAWQIISGAKTFPFIQFADYIR*QNIPFY
Trigger: ATAAAAGGGAATGTTTTGGCACCTGATATAATCTGC...AAATTGAATAAAAGGGAATGTTTTGGCACCTGATATAATCTGCCAGGCTATGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR GCA 90 bp AATAGTCTTAGCCAATGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACGCAAAGCGCATGATTTaGCTCTTCACAAAAATAAAT +
Preference number: 4 (lower is better)
Translates to: NSLSQCSKNAHKEGLGNYAKRMI*LFTKIN
Trigger: ATTTATTTTTGTGAAGAGGCAAATCATGCGCTTTGC...GTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACATTGGCTAAGACTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR GCA 90 bp ATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAATTAAATAAACCTGCAAAGCGCATGATTTaGCTCTTCACAAAAATAAAT +
Preference number: 4 (lower is better)
Translates to: IDMEDISLQLSPLELNKPAKRMI*LFTKIN
Trigger: ATTTATTTTTGTGAAGAGGCAAATCATGCGCTTTGC...AGGTTTATTTAATTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS CCA 90 bp CCCTACCTCGCGCAGAATTGTTCGGGTTTACCCCGCTGTCCTGGCTaGTCAGCCCAGGCTCCGCCGAAGCGACGGCGCCTGGGTCCCCTG +
Preference number: 5 (lower is better)
Translates to: PYLAQNCSGLPRCPG*SAQAPPKRRRLGPL
Trigger: CAGGGGACCCAGGCGCCGTCGCTTCGGCGGAGCCTGGGCTGACCAGCCAGGACAGCGGGGTAAACCCGAACAATTCTGCGCGAGGTAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368516.1
ENST00000368518.5
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS CCA 90 bp GCCTCCCTACCTCGCGCAGAATTGTTCGGGTTTACCCCGCTGTCCTaGCTGGTCAGCCCAGGCTCCGCCGAAGCGACGGCGCCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: ASLPRAELFGFTPLS*LVSPGSAEATAPGS
Trigger: GGACCCAGGCGCCGTCGCTTCGGCGGAGCCTGGGCTGACCAGCCAGGACAGCGGGGTAAACCCGAACAATTCTGCGCGAGGTAGGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368516.1
ENST00000368518.5
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS GCA 90 bp CGTAGGCCATCACCAGCACGACATTCACCCCGGAGAGCCAGTTACTaGCGGACGCCATGGCCTCCCTACCTCGCGCAGAATTGTTCGGGT +
Preference number: 5 (lower is better)
Translates to: RRPSPARHSPRRASY*RTPWPPYLAQNCSG
Trigger: ACCCGAACAATTCTGCGCGAGGTAGGGAGGCCATGGCGTCCGGCAGTAACTGGCTCTCCGGGGTGAATGTCGTGCTGGTGATGGCCTACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368516.1
ENST00000368518.5
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS CCA 90 bp CCAGCACGACATTCACCCCGGAGAGCCAGTTACTGCCGGACGCCATaGCCTCCCTACCTCGCGCAGAATTGTTCGGGTTTACCCCGCTGT +
Preference number: 5 (lower is better)
Translates to: PARHSPRRASYCRTP*PPYLAQNCSGLPRC
Trigger: ACAGCGGGGTAAACCCGAACAATTCTGCGCGAGGTAGGGAGGCCATGGCGTCCGGCAGTAACTGGCTCTCCGGGGTGAATGTCGTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368516.1
ENST00000368518.5
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS CCA 90 bp CCAAGCCAGACCCGGCCTGAAAACATGGCGGACAGGCAGGAGAGCTaGGAAAGGAGAACGACGCCTTCCAGCTTCCCCCTGACACGTGAC +
Preference number: 5 (lower is better)
Translates to: PSQTRPENMADRQES*ERRTTPSSFPLTRD
Trigger: GTCACGTGTCAGGGGGAAGCTGGAAGGCGTCGTTCTCCTTTCCCAGCTCTCCTGCCTGTCCGCCATGTTTTCAGGCCGGGTCTGGCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350592.7
ENST00000368516.1
ENST00000470180.2
ENST00000640799.1
CDS-3UTR CAA 90 bp CTGGGCCAGATGTTCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCACTACCTCGCGCAGAATaGTTCGGGTTTACCCCGCTG +
Preference number: 5 (lower is better)
Translates to: LGQMFRGRPGKQPVLHIALPRAE*FGFTPL
Trigger: CAGCGGGGTAAACCCGAACAATTCTGCGCGAGGTAG...TGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGAACATCTGGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp CTGGGCCAGATGTTCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAGGCAAGCAGCCTGTCTaGCACATTGCAACTGACTGG +
Preference number: 5 (lower is better)
Translates to: LGQMFRGRPGKQPVLHIAGKQPV*HIATDW
Trigger: CCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCC...TGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGAACATCTGGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp CGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGCGGGCAAGCAGCCTGTCTaGCACATTGCAACTGACTGG +
Preference number: 5 (lower is better)
Translates to: RELGWIQSGPAGPDVPRAGKQPV*HIATDW
Trigger: CCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCC...CGCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp AACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGCTACCTCGCGCAGAATaGTTCGGGTTTACCCCGCTG +
Preference number: 5 (lower is better)
Translates to: NGNLDGYSLGLLGQMFRGLPRAE*FGFTPL
Trigger: CAGCGGGGTAAACCCGAACAATTCTGCGCGAGGTAG...CCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp CAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGATGTCACCTGGATGGTaGTTGGGGAGACCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: QRELGWIQSGPAGPDVPRMSPGW*LGRPQG
Trigger: CCCCTGAGGTCTCCCCAACAACCATCCAGGTGACAT...CCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp TCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAGGCAAGCAGCCTGTCTaGCACATTGCAACTGACTGG +
Preference number: 5 (lower is better)
Translates to: SEGGPASSLSCTLQLTGLGKQPV*HIATDW
Trigger: CCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCC...TAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp CAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGCACCAACTTCCCCACTaGACCTCCCACCAGTTCCTG +
Preference number: 5 (lower is better)
Translates to: QRELGWIQSGPAGPDVPRHQLPH*TSHQFL
Trigger: CAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTG...CCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp CTGGGCCAGATGTTCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACCAGTGCATTGGGCTaGTTAGGGGAAACCATTCCT +
Preference number: 5 (lower is better)
Translates to: LGQMFRGRPGKQPVLHIATSALG*LGETIP
Trigger: AGGAATGGTTTCCCCTAACAAGCCCAATGCACTGGT...TGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGAACATCTGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS TCA 90 bp CACTGCACTGTGGCAACAGTCCAACACTACTGTACCAGCTCCCTCTaGCACGTTCCCCTCCAAACTCACGCAGTGGCCAGCTCACTCAGG +
Preference number: 5 (lower is better)
Translates to: HCTVATVQHYCTSSL*HVPLQTHAVASSLR
Trigger: CCTGAGTGAGCTGGCCACTGCGTGAGTTTGGAGGGGAACGTGTCAGAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CAA 90 bp ACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGCTCCTCTTTCAAGTCCTaGGGGGCATTGTGTCCCACA +
Preference number: 5 (lower is better)
Translates to: TGTWMDTVWACWARCSEGSSFKS*GALCPT
Trigger: TGTGGGACACAATGCCCCCAAGGACTTGAAAGAGGA...GCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
CDS CCA 90 bp ACTGTACCAGCTCCCTCTGACACGTTCCCCTCCAAACTCACGCAGTaGCCAGCTCACTCAGGGCCTCCTGATAGCGTAGGTACTCATTCT +
Preference number: 5 (lower is better)
Translates to: TVPAPSDTFPSKLTQ*PAHSGPPDSVGTHS
Trigger: AGAATGAGTACCTACGCTATCAGGAGGCCCTGAGTGAGCTGGCCACTGCGTGAGTTTGGAGGGGAACGTGTCAGAGGGAGCTGGTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CAA 90 bp CGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGCGGCTTTGCGTACACCCTaGAAAGGCGTACTAGTGTTT +
Preference number: 5 (lower is better)
Translates to: RELGWIQSGPAGPDVPRAALRTP*KGVLVF
Trigger: AAACACTAGTACGCCTTTCAAGGGTGTACGCAAAGC...CGCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp CTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATATGTCACCTGGATGGTaGTTGGGGAGACCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: LWIQRELGWIQSGPAGPDMSPGW*LGRPQG
Trigger: CCCCTGAGGTCTCCCCAACAACCATCCAGGTGACAT...ATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp AGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCCACCAACTTCCCCACTaGACCTCCCACCAGTTCCTG +
Preference number: 5 (lower is better)
Translates to: RTLDTTGTWMDTVWACWAHQLPH*TSHQFL
Trigger: CAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTG...GGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp CGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATTCCTCTTTCAAGTCCTaGGGGGCATTGTGTCCCACA +
Preference number: 5 (lower is better)
Translates to: RGRPGKQPVLHIATDWLNSSFKS*GALCPT
Trigger: TGTGGGACACAATGCCCCCAAGGACTTGAAAGAGGA...ATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
CDS-3UTR CAA 90 bp CAGATGTTCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACGCTTTGCGTACACCCTaGAAAGGCGTACTAGTGTTT +
Preference number: 5 (lower is better)
Translates to: QMFRGRPGKQPVLHIATDALRTP*KGVLVF
Trigger: AAACACTAGTACGCCTTTCAAGGGTGTACGCAAAGC...GTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGAACATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp ACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGCGCTTTGCGTACACCCTaGAAAGGCGTACTAGTGTTT +
Preference number: 5 (lower is better)
Translates to: TGTWMDTVWACWARCSEGALRTP*KGVLVF
Trigger: AAACACTAGTACGCCTTTCAAGGGTGTACGCAAAGC...GCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp TCCGAGGGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAGTATCAATGAGTGCTTaGCGTACACCCTTGAAAGGC +
Preference number: 5 (lower is better)
Translates to: SEGGPASSLSCTLQLTGLVSMSA*RTPLKG
Trigger: GCCTTTCAAGGGTGTACGCAAAGCACTCATTGATAC...TAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCCCTCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp CCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGATGTCACCTGGATGGTaGTTGGGGAGACCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: PASSLSCTLQLTGLIYGKMSPGW*LGRPQG
Trigger: CCCCTGAGGTCTCCCCAACAACCATCCAGGTGACAT...CTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp GGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACTTGAAGCTTACGGTCTaGGGGGCATTGTGTCCCACA +
Preference number: 5 (lower is better)
Translates to: GGPASSLSCTLQLTGLIYLKLTV*GALCPT
Trigger: TGTGGGACACAATGCCCCCAAGACCGTAAGCTTCAA...GTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648267.1
CDS-3UTR CAA 90 bp TATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTACTGTACCAGCTCCCTCCTACCTCGCGCAGAATaGTTCGGGTTTACCCCGCTG +
Preference number: 5 (lower is better)
Translates to: YEGHCTVATVQHYCTSSLLPRAE*FGFTPL
Trigger: CAGCGGGGTAAACCCGAACAATTCTGCGCGAGGTAG...GAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CAA 90 bp GGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGCTACCTCGCGCAGAATaGTTCGGGTTTACCCCGCTG +
Preference number: 5 (lower is better)
Translates to: GKQPVLHIATDWLNLRQELPRAE*FGFTPL
Trigger: CAGCGGGGTAAACCCGAACAATTCTGCGCGAGGTAG...CTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp CAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGTATCAATGAGTGCTTaGCGTACACCCTTGAAAGGC +
Preference number: 5 (lower is better)
Translates to: QRELGWIQSGPAGPDVPRVSMSA*RTPLKG
Trigger: GCCTTTCAAGGGTGTACGCAAAGCACTCATTGATAC...CCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp CAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGAGCCTGTCTTGCACATaGCAACTGACTGGCTTAATC +
Preference number: 5 (lower is better)
Translates to: QRELGWIQSGPAGPDVPRSLSCT*QLTGLI
Trigger: GATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCT...CCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp TGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTGGCAAGCAGCCTGTCTaGCACATTGCAACTGACTGG +
Preference number: 5 (lower is better)
Translates to: WIQRELGWIQSGPAGPDVGKQPV*HIATDW
Trigger: CCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCC...AACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp AGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCGGATACAACGGGAACTaGGATGGATACAGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: RTLDTTGTWMDTVWACWAGYNGN*DGYSLG
Trigger: GCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCC...GGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp AGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGTCAGACCAGTGCATaGGGCTTGTTAGGGGAAACC +
Preference number: 5 (lower is better)
Translates to: RTLDTTGTWMDTVWACWASQTSA*GLLGET
Trigger: GGTTTCCCCTAACAAGCCCAATGCACTGGTCTGACT...GGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp GGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCAGTCAGACCAGTGCATaGGGCTTGTTAGGGGAAACC +
Preference number: 5 (lower is better)
Translates to: GYNGNLDGYSLGLLGQMFSQTSA*GLLGET
Trigger: GGTTTCCCCTAACAAGCCCAATGCACTGGTCTGACT...GAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp GGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCTCCTCTTTCAAGTCCTaGGGGGCATTGTGTCCCACA +
Preference number: 5 (lower is better)
Translates to: GYNGNLDGYSLGLLGQMFSSFKS*GALCPT
Trigger: TGTGGGACACAATGCCCCCAAGGACTTGAAAGAGGA...GAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
CDS-3UTR CAA 90 bp GGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGCTTTGCGTACACCCTaGAAAGGCGTACTAGTGTTT +
Preference number: 5 (lower is better)
Translates to: GGPASSLSCTLQLTGLIYALRTP*KGVLVF
Trigger: AAACACTAGTACGCCTTTCAAGGGTGTACGCAAAGC...GTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp GGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCGTATCAATGAGTGCTTaGCGTACACCCTTGAAAGGC +
Preference number: 5 (lower is better)
Translates to: GPASSLSCTLQLTGLIYGVSMSA*RTPLKG
Trigger: GCCTTTCAAGGGTGTACGCAAAGCACTCATTGATAC...GCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp GTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGTCCTTCAGCTCCATGTCACCTGGATGGTaGTTGGGGAGACCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: VLHIATDWLNLRQESFSSMSPGW*LGRPQG
Trigger: CCCCTGAGGTCTCCCCAACAACCATCCAGGTGACAT...GGAGCTGAAGGACTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp CCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGTCCTTCAGCATGTCACCTGGATGGTaGTTGGGGAGACCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: PVLHIATDWLNLRQESFSMSPGW*LGRPQG
Trigger: CCCCTGAGGTCTCCCCAACAACCATCCAGGTGACAT...GCTGAAGGACTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp GGGAGACCTCAGGGGACTGAGTTAGGTCTTTGGCTGCTGACTGGTGATGTCGCTGCTCATAAGGAAGGGTaGGGGAATTACCCTTTAGAC +
Preference number: 5 (lower is better)
Translates to: GRPQGTELGLWLLTGDVAAHKEG*GNYPLD
Trigger: GTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGC...AGCGACATCACCAGTCAGCAGCCAAAGACCTAACTCAGTCCCCTGAGGTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp GTCACTGCACTGTGGCAACAGTCCAACACTACTGTACCAGCTCCCTCTGACACGGCTTTGCGTACACCCTaGAAAGGCGTACTAGTGTTT +
Preference number: 5 (lower is better)
Translates to: VTALWQQSNTTVPAPSDTALRTP*KGVLVF
Trigger: AAACACTAGTACGCCTTTCAAGGGTGTACGCAAAGC...CGTGTCAGAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGCAGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CAA 90 bp TACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAAGCCTGTCTTGCACATaGCAACTGACTGGCTTAATC +
Preference number: 5 (lower is better)
Translates to: YNGNLDGYSLGLLGQMFRSLSCT*QLTGLI
Trigger: GATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCT...TCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp CAAGGAAGTGCTTGGCACGTTTACTCTTCTGACTGGAGGGGAGGTATGTCACCTGGATACAACGGGAACTaGGATGGATACAGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: QGSAWHVYSSDWRGGMSPGYNGN*DGYSLG
Trigger: GCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCC...AGGTGACATACCTCCCCTCCAGTCAGAAGAGTAAACGTGCCAAGCACTTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp GAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGCTCATAAGGAAGGGTaGGGGAATTACCCTTTAGAC +
Preference number: 5 (lower is better)
Translates to: ELWIQRELGWIQSGPAGPAHKEG*GNYPLD
Trigger: GTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGC...TGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp AGACCTCAGGGGACTGAGTTAGGTCTTTGGCTGCTGACTGGTGATGTCGCTGAGGCTCATAAGGAAGGGTaGGGGAATTACCCTTTAGAC +
Preference number: 5 (lower is better)
Translates to: RPQGTELGLWLLTGDVAEAHKEG*GNYPLD
Trigger: GTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGC...CTCAGCGACATCACCAGTCAGCAGCCAAAGACCTAACTCAGTCCCCTGAGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp CCACATTCACCAACTTCCCCACTTGACCTCCCACCAGTTCCTGTCTGCTTTTTCAGTCAGACCAGTGCATaGGGCTTGTTAGGGGAAACC +
Preference number: 5 (lower is better)
Translates to: PHSPTSPLDLPPVPVCFFSQTSA*GLLGET
Trigger: GGTTTCCCCTAACAAGCCCAATGCACTGGTCTGACT...GAAAAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTGAATGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp CAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGATAGTTGTAGCAACTTaGATTTCCCTGGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: QRELGWIQSGPAGPDVPRIVVAT*ISLGFQ
Trigger: CTGGAAACCCAGGGAAATCAAAGTTGCTACAACTAT...CCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp CGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCCAGATGTTCCGAGGGCGTGCAAAGCGCATGATTaGCCTCTTCACAAAAATAAA +
Preference number: 5 (lower is better)
Translates to: RELGWIQSGPAGPDVPRACKAHD*PLHKNK
Trigger: TTTATTTTTGTGAAGAGGCAAATCATGCGCTTTGCA...CGCCCTCGGAACATCTGGCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp TATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTACTGTACCAGCTCCCTCTCCTCTTTCAAGTCCTaGGGGGCATTGTGTCCCACA +
Preference number: 5 (lower is better)
Translates to: YEGHCTVATVQHYCTSSLSSFKS*GALCPT
Trigger: TGTGGGACACAATGCCCCCAAGGACTTGAAAGAGGA...GAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368518.5
CDS TCA 90 bp ATCTCCTCTTTCAAGTCCTTGGGGGCATTGTGTCCCACAGGGACATaGGGTCCCCTTCGAGATTTCATTGCAAAGCGCATGATTTGCCTC +
Preference number: 5 (lower is better)
Translates to: ISSFKSLGALCPTGT*GPLRDFIAKRMICL
Trigger: GAGGCAAATCATGCGCTTTGCAATGAAATCTCGAAGGGGACCTCATGTCCCTGTGGGACACAATGCCCCCAAGGACTTGAAAGAGGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000368518.5
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
CDS TCA 90 bp TTCTTGAAGCTTACGGTCTTGGGGGCATTGTGTCCCACAGGGACATaGGGTCCCCTTCGAGATTTCATTGCAAAGCGCATGATTTGCCTC +
Preference number: 5 (lower is better)
Translates to: FLKLTVLGALCPTGT*GPLRDFIAKRMICL
Trigger: GAGGCAAATCATGCGCTTTGCAATGAAATCTCGAAGGGGACCTCATGTCCCTGTGGGACACAATGCCCCCAAGACCGTAAGCTTCAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648267.1
CDS GCA 90 bp TGTAGGTCCTGGCTTTATAGTCGTGAACAAAACTGGCATGGTGCCTaGATTCTTGAAGCTTACGGTCTTGGGGGCATTGTGTCCCACAGG +
Preference number: 5 (lower is better)
Translates to: CRSWLYSREQNWHGA*ILEAYGLGGIVSHR
Trigger: CCTGTGGGACACAATGCCCCCAAGACCGTAAGCTTCAAGAATGCAGGCACCATGCCAGTTTTGTTCACGACTATAAAGCCAGGACCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648267.1
CDS-3UTR CAA 90 bp GGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCATGAAATGGGATCTTTaGATTTCCCTGGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: GPASSLSCTLQLTGLIYGMKWDL*ISLGFQ
Trigger: CTGGAAACCCAGGGAAATCAAAAGATCCCATTTCAT...GCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362076.8
ENST00000368519.5
CDS-3UTR CAA 90 bp AAGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGGGCGTATCAATGAGTGCTTaGCGTACACCCTTGAAAGGC +
Preference number: 5 (lower is better)
Translates to: KNSGYNGNLDGYSLGLLGVSMSA*RTPLKG
Trigger: GCCTTTCAAGGGTGTACGCAAAGCACTCATTGATAC...GCCCAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp CCACATTCACCAACTTCCCCACTTGACCTCCCACCAGTTCCTGTCTGCTTTTTCACCAGTGCATTGGGCTaGTTAGGGGAAACCATTCCT +
Preference number: 5 (lower is better)
Translates to: PHSPTSPLDLPPVPVCFFTSALG*LGETIP
Trigger: AGGAATGGTTTCCCCTAACAAGCCCAATGCACTGGT...GAAAAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTGAATGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp GGCGGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACATAGTTGTAGCAACTTaGATTTCCCTGGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: GGPASSLSCTLQLTGLIYIVVAT*ISLGFQ
Trigger: CTGGAAACCCAGGGAAATCAAAGTTGCTACAACTAT...GTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp GTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGTCCTTCAGCTCCTCCTCTTTCAAGTCCTaGGGGGCATTGTGTCCCACA +
Preference number: 5 (lower is better)
Translates to: VLHIATDWLNLRQESFSSSSFKS*GALCPT
Trigger: TGTGGGACACAATGCCCCCAAGGACTTGAAAGAGGA...GGAGCTGAAGGACTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
CDS-3UTR CAA 90 bp CCACATTCACCAACTTCCCCACTTGACCTCCCACCAGTTCCTGTCTGCTTTTTCGCTTTGCGTACACCCTaGAAAGGCGTACTAGTGTTT +
Preference number: 5 (lower is better)
Translates to: PHSPTSPLDLPPVPVCFFALRTP*KGVLVF
Trigger: AAACACTAGTACGCCTTTCAAGGGTGTACGCAAAGC...GAAAAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTGAATGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp TGTAGTAGTCTAGCATCATCATCTGCAAGGAGCTGGGGCTCATACTTGATATCCGGCAAGCAGCCTGTCTaGCACATTGCAACTGACTGG +
Preference number: 5 (lower is better)
Translates to: CSSLASSSARSWGSYLISGKQPV*HIATDW
Trigger: CCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCC...GGATATCAAGTATGAGCCCCAGCTCCTTGCAGATGATGATGCTAGACTACTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648267.1
CDS-3UTR CAA 90 bp CCTTTAGACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTGGATGGATACCACCAACTTCCCCACTaGACCTCCCACCAGTTCCTG +
Preference number: 5 (lower is better)
Translates to: PLDTSSKNSGYNGNLDGYHQLPH*TSHQFL
Trigger: CAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTG...GTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGTCTAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp CAATTCAAGGAAGTGCTTGGCACGTTTACTCTTCTGACTGGAGGGGAGGTATGTAGTCAGACCAGTGCATaGGGCTTGTTAGGGGAAACC +
Preference number: 5 (lower is better)
Translates to: QFKEVLGTFTLLTGGEVCSQTSA*GLLGET
Trigger: GGTTTCCCCTAACAAGCCCAATGCACTGGTCTGACT...ACATACCTCCCCTCCAGTCAGAAGAGTAAACGTGCCAAGCACTTCCTTGAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp ATGTTGGTCAGGCTGGTCTCGGATTCCCAACCTCAGATGATCCTCCCGCCTCGGTGCAAAGCGCATGATTaGCCTCTTCACAAAAATAAA +
Preference number: 5 (lower is better)
Translates to: MLVRLVSDSQPQMILPPRCKAHD*PLHKNK
Trigger: TTTATTTTTGTGAAGAGGCAAATCATGCGCTTTGCA...CCGAGGCGGGAGGATCATCTGAGGTTGGGAATCCGAGACCAGCCTGACCAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368518.5
CDS-3UTR CAA 90 bp CCCAATTCGTGCTTTAACCGCAGTGGCCAGCTCACTCAGGGCCTCCTGATAGCGTGCAAAGCGCATGATTaGCCTCTTCACAAAAATAAA +
Preference number: 5 (lower is better)
Translates to: PNSCFNRSGQLTQGLLIACKAHD*PLHKNK
Trigger: TTTATTTTTGTGAAGAGGCAAATCATGCGCTTTGCA...CGCTATCAGGAGGCCCTGAGTGAGCTGGCCACTGCGGTTAAAGCACGAATTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp CAATCAACTCTAAGATGCCCTAAACCCAAACAGTTCCCATTCAACTGTGCACAAATGTCACCTGGATGGTaGTTGGGGAGACCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: QSTLRCPKPKQFPFNCAQMSPGW*LGRPQG
Trigger: CCCCTGAGGTCTCCCCAACAACCATCCAGGTGACAT...TTGTGCACAGTTGAATGGGAACTGTTTGGGTTTAGGGCATCTTAGAGTTGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp CCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGAGTCCTTCAGCAGCCTGTCTTGCACATaGCAACTGACTGGCTTAATC +
Preference number: 5 (lower is better)
Translates to: PVLHIATDWLNLRQESFSSLSCT*QLTGLI
Trigger: GATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCT...GCTGAAGGACTCTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp ACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGGATACAACGGGAACTaGGATGGATACAGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: TQALRTLDTTGTWMDTVWGYNGN*DGYSLG
Trigger: GCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCC...CCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp TTTATAAAGTCAGACCAGTGCATTGGGCTTGTTAGGGGAAACCATTCCTTCCTACACCAACTTCCCCACTaGACCTCCCACCAGTTCCTG +
Preference number: 5 (lower is better)
Translates to: FIKSDQCIGLVRGNHSFLHQLPH*TSHQFL
Trigger: CAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTG...TAGGAAGGAATGGTTTCCCCTAACAAGCCCAATGCACTGGTCTGACTTTATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp TGCCCTAAACCCAAACAGTTCCCATTCAACTGTGCACAAAGGTATAGATATGGACACCAACTTCCCCACTaGACCTCCCACCAGTTCCTG +
Preference number: 5 (lower is better)
Translates to: CPKPKQFPFNCAQRYRYGHQLPH*TSHQFL
Trigger: CAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTG...TCCATATCTATACCTTTGTGCACAGTTGAATGGGAACTGTTTGGGTTTAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp GGAAACCATTCCTTCCTACTGTCACATAGCCTGGCAGATTATATCAGGTGCCAAAGTCAGACCAGTGCATaGGGCTTGTTAGGGGAAACC +
Preference number: 5 (lower is better)
Translates to: GNHSFLLSHSLADYIRCQSQTSA*GLLGET
Trigger: GGTTTCCCCTAACAAGCCCAATGCACTGGTCTGACT...TTGGCACCTGATATAATCTGCCAGGCTATGTGACAGTAGGAAGGAATGGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp GGCCCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCTGCAAAGCGCATGATTaGCCTCTTCACAAAAATAAA +
Preference number: 5 (lower is better)
Translates to: GPASSLSCTLQLTGLIYGCKAHD*PLHKNK
Trigger: TTTATTTTTGTGAAGAGGCAAATCATGCGCTTTGCA...GCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS TCA 90 bp CTAGCATCATCATCTGCAAGGAGCTGGGGCTCATACTTGATATCCTaGACCCTGGAGAGTCGAATATCAATCTCCTCTTTCAAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LASSSARSWGSYLIS*TLESRISISSFKSR
Trigger: CCTGGACTTGAAAGAGGAGATTGATATTCGACTCTCCAGGGTTCAGGATATCAAGTATGAGCCCCAGCTCCTTGCAGATGATGATGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368516.1
CDS-3UTR CAA 90 bp AGCCAATGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACCCTTTAGACATGTCACCTGGATGGTaGTTGGGGAGACCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: SQCSKNAHKEGLGNYPLDMSPGW*LGRPQG
Trigger: CCCCTGAGGTCTCCCCAACAACCATCCAGGTGACAT...GTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACATTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp CCGGCAAGCAGCCTGTCTTGCACATTGCAACTGACTGGCTTAATCTACGGCAAGCTCCAACTCTCACCTTaGGAATTAAATAAACCTGGA +
Preference number: 5 (lower is better)
Translates to: PASSLSCTLQLTGLIYGKLQLSP*ELNKPG
Trigger: TCCAGGTTTATTTAATTCCAAAGGTGAGAGTTGGAG...CTTGCCGTAGATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp GCCAAAGACCCCTGTCCCATAGCGGGCTGTTTCATAGCCATCCAAAAGGGTATCCTCCAACTCTCACCTTaGGAATTAAATAAACCTGGA +
Preference number: 5 (lower is better)
Translates to: AKDPCPIAGCFIAIQKGILQLSP*ELNKPG
Trigger: TCCAGGTTTATTTAATTCCAAAGGTGAGAGTTGGAG...GATACCCTTTTGGATGGCTATGAAACAGCCCGCTATGGGACAGGGGTCTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp TATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTACTGTACCAGCTCCCTCATAGTTGTAGCAACTTaGATTTCCCTGGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: YEGHCTVATVQHYCTSSLIVVAT*ISLGFQ
Trigger: CTGGAAACCCAGGGAAATCAAAGTTGCTACAACTAT...GAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CAA 90 bp GAAGTGCTTGGCACGTTTACTCTTCTGACTGGAGGGGAGGTATGTCACCTGGATATAGTTGTAGCAACTTaGATTTCCCTGGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: EVLGTFTLLTGGEVCHLDIVVAT*ISLGFQ
Trigger: CTGGAAACCCAGGGAAATCAAAGTTGCTACAACTAT...ATCCAGGTGACATACCTCCCCTCCAGTCAGAAGAGTAAACGTGCCAAGCACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS TCA 90 bp CTAGCATCATCATCTGCAAGGAGCTGGGGCTCATACTTGATATCCTaGACCCTGGAGAGTCGAATATCAATCTCCTCTTTCAAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: LASSSARSWGSYLIS*TLESRISISSFKSL
Trigger: CAAGGACTTGAAAGAGGAGATTGATATTCGACTCTCCAGGGTTCAGGATATCAAGTATGAGCCCCAGCTCCTTGCAGATGATGATGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368518.5
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
CDS CCA 90 bp TTCAAGTCTATGTGTAGGTCCTGGCTTTATAGTCGTGAACAAAACTaGCATGGTGCCTGCATTCTTGAAGCTTACGGTCTTGGGGGCATT +
Preference number: 5 (lower is better)
Translates to: FKSMCRSWLYSREQN*HGACILEAYGLGGI
Trigger: AATGCCCCCAAGACCGTAAGCTTCAAGAATGCAGGCACCATGCCAGTTTTGTTCACGACTATAAAGCCAGGACCTACACATAGACTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648267.1
CDS-3UTR CAA 90 bp ACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGAGCCTGTCTTGCACATaGCAACTGACTGGCTTAATC +
Preference number: 5 (lower is better)
Translates to: TQALRTLDTTGTWMDTVWSLSCT*QLTGLI
Trigger: GATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCT...CCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp GATCCTTGCATGTCAGGAAAGCTGCAACACATCTGGTTTAAGTGGAGCACAAAGAGCCTGTCTTGCACATaGCAACTGACTGGCTTAATC +
Preference number: 5 (lower is better)
Translates to: DPCMSGKLQHIWFKWSTKSLSCT*QLTGLI
Trigger: GATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCT...CTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTTTCCTGACATGCAAGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp TGGTTTAAGTGGAGCACAAAGGTAAGTTATTCCACATTCACCAACTTCCCCACTGGATACAACGGGAACTaGGATGGATACAGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: WFKWSTKVSYSTFTNFPTGYNGN*DGYSLG
Trigger: GCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCC...AGTGGGGAAGTTGGTGAATGTGGAATAACTTACCTTTGTGCTCCACTTAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp CCACATTCACCAACTTCCCCACTTGACCTCCCACCAGTTCCTGTCTGCTTTTTCCTCCAACTCTCACCTTaGGAATTAAATAAACCTGGA +
Preference number: 5 (lower is better)
Translates to: PHSPTSPLDLPPVPVCFFLQLSP*ELNKPG
Trigger: TCCAGGTTTATTTAATTCCAAAGGTGAGAGTTGGAG...GAAAAAGCAGACAGGAACTGGTGGGAGGTCAAGTGGGGAAGTTGGTGAATGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS TCA 90 bp CTAGCATCATCATCTGCAAGGAGCTGGGGCTCATACTTGATATCCTaGACCCTGGAGAGTCGAATATCAATCTCCTCTTTCAAGTCTATG +
Preference number: 5 (lower is better)
Translates to: LASSSARSWGSYLIS*TLESRISISSFKSM
Trigger: CATAGACTTGAAAGAGGAGATTGATATTCGACTCTCCAGGGTTCAGGATATCAAGTATGAGCCCCAGCTCCTTGCAGATGATGATGCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648267.1
CDS-3UTR CAA 90 bp GTCTTAGCCAATGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACCCTTGGATACAACGGGAACTaGGATGGATACAGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: VLANVLKMLIRKGWGITLGYNGN*DGYSLG
Trigger: GCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCC...AAGGGTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACATTGGCTAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp TCTAAGAACTCTGGATACAACGGGAACTTGGATGGATACAGTCTGGGCCTGCTGCTCCAACTCTCACCTTaGGAATTAAATAAACCTGGA +
Preference number: 5 (lower is better)
Translates to: SKNSGYNGNLDGYSLGLLLQLSP*ELNKPG
Trigger: TCCAGGTTTATTTAATTCCAAAGGTGAGAGTTGGAG...CAGCAGGCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp TGCCCTAAACCCAAACAGTTCCCATTCAACTGTGCACAAAGGTATAGATATGGAACCAGTGCATTGGGCTaGTTAGGGGAAACCATTCCT +
Preference number: 5 (lower is better)
Translates to: CPKPKQFPFNCAQRYRYGTSALG*LGETIP
Trigger: AGGAATGGTTTCCCCTAACAAGCCCAATGCACTGGT...TCCATATCTATACCTTTGTGCACAGTTGAATGGGAACTGTTTGGGTTTAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp AAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAATTAAATCTACCTCGCGCAGAATaGTTCGGGTTTACCCCGCTG +
Preference number: 5 (lower is better)
Translates to: KGIDMEDISLQLSPLELNLPRAE*FGFTPL
Trigger: CAGCGGGGTAAACCCGAACAATTCTGCGCGAGGTAG...ATTTAATTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp TTTATAAAGTCAGACCAGTGCATTGGGCTTGTTAGGGGAAACCATTCCTTCCTAGCTTTGCGTACACCCTaGAAAGGCGTACTAGTGTTT +
Preference number: 5 (lower is better)
Translates to: FIKSDQCIGLVRGNHSFLALRTP*KGVLVF
Trigger: AAACACTAGTACGCCTTTCAAGGGTGTACGCAAAGC...TAGGAAGGAATGGTTTCCCCTAACAAGCCCAATGCACTGGTCTGACTTTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp CAATCAACTCTAAGATGCCCTAAACCCAAACAGTTCCCATTCAACTGTGCACAAAGCCTGTCTTGCACATaGCAACTGACTGGCTTAATC +
Preference number: 5 (lower is better)
Translates to: QSTLRCPKPKQFPFNCAQSLSCT*QLTGLI
Trigger: GATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCT...TTGTGCACAGTTGAATGGGAACTGTTTGGGTTTAGGGCATCTTAGAGTTGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp GCCCTAAACCCAAACAGTTCCCATTCAACTGTGCACAAAGGTATAGATATGGAAGCTCATAAGGAAGGGTaGGGGAATTACCCTTTAGAC +
Preference number: 5 (lower is better)
Translates to: ALNPNSSHSTVHKGIDMEAHKEG*GNYPLD
Trigger: GTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGC...TTCCATATCTATACCTTTGTGCACAGTTGAATGGGAACTGTTTGGGTTTAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp TGTGGAATTAAAGTAGATCCTTGCATGTCAGGAAAGCTGCAACACATCTGGTTTACCAGTGCATTGGGCTaGTTAGGGGAAACCATTCCT +
Preference number: 5 (lower is better)
Translates to: CGIKVDPCMSGKLQHIWFTSALG*LGETIP
Trigger: AGGAATGGTTTCCCCTAACAAGCCCAATGCACTGGT...AAACCAGATGTGTTGCAGCTTTCCTGACATGCAAGGATCTACTTTAATTCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp CCTTTAGACACAAGCTCTAAGAACTCTGGATACAACGGGAACTTGGATGGATACATGAAATGGGATCTTTaGATTTCCCTGGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: PLDTSSKNSGYNGNLDGYMKWDL*ISLGFQ
Trigger: CTGGAAACCCAGGGAAATCAAAAGATCCCATTTCAT...GTATCCATCCAAGTTCCCGTTGTATCCAGAGTTCTTAGAGCTTGTGTCTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000362076.8
ENST00000368519.5
CDS-3UTR CAA 90 bp TGGATTTTGTTTATATGCTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACGCTTTGCGTACACCCTaGAAAGGCGTACTAGTGTTT +
Preference number: 5 (lower is better)
Translates to: WILFICFMKVTALWQQSNALRTP*KGVLVF
Trigger: AAACACTAGTACGCCTTTCAAGGGTGTACGCAAAGC...GTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAAAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CAA 90 bp CAACACATCTGGTTTAAGTGGAGCACAAAGGTAAGTTATTCCACATTCACCAACGTATCAATGAGTGCTTaGCGTACACCCTTGAAAGGC +
Preference number: 5 (lower is better)
Translates to: QHIWFKWSTKVSYSTFTNVSMSA*RTPLKG
Trigger: GCCTTTCAAGGGTGTACGCAAAGCACTCATTGATAC...GTTGGTGAATGTGGAATAACTTACCTTTGTGCTCCACTTAAACCAGATGTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp TGGATTTTGTTTATATGCTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACGTATCAATGAGTGCTTaGCGTACACCCTTGAAAGGC +
Preference number: 5 (lower is better)
Translates to: WILFICFMKVTALWQQSNVSMSA*RTPLKG
Trigger: GCCTTTCAAGGGTGTACGCAAAGCACTCATTGATAC...GTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAAAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CAA 90 bp GCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAATTAGCCTGTCTTGCACATaGCAACTGACTGGCTTAATC +
Preference number: 5 (lower is better)
Translates to: AQRYRYGRHLTPTLTFGISLSCT*QLTGLI
Trigger: GATTAAGCCAGTCAGTTGCAATGTGCAAGACAGGCT...AATTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp AAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAATTAAATGGCAAGCAGCCTGTCTaGCACATTGCAACTGACTGG +
Preference number: 5 (lower is better)
Translates to: KGIDMEDISLQLSPLELNGKQPV*HIATDW
Trigger: CCAGTCAGTTGCAATGTGCAAGACAGGCTGCTTGCC...ATTTAATTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp AGCCAATGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACCCTTTAGACGCTCATAAGGAAGGGTaGGGGAATTACCCTTTAGAC +
Preference number: 5 (lower is better)
Translates to: SQCSKNAHKEGLGNYPLDAHKEG*GNYPLD
Trigger: GTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGC...GTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACATTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp TGTCACATAGCCTGGCAGATTATATCAGGTGCCAAAACATTCCCTTTTATTCAAGTATCAATGAGTGCTTaGCGTACACCCTTGAAAGGC +
Preference number: 5 (lower is better)
Translates to: CHIAWQIISGAKTFPFIQVSMSA*RTPLKG
Trigger: GCCTTTCAAGGGTGTACGCAAAGCACTCATTGATAC...TTGAATAAAAGGGAATGTTTTGGCACCTGATATAATCTGCCAGGCTATGTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp AAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAATTAAATGGATACAACGGGAACTaGGATGGATACAGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: KGIDMEDISLQLSPLELNGYNGN*DGYSLG
Trigger: GCCCAGACTGTATCCATCCAAGTTCCCGTTGTATCC...ATTTAATTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp TGTCACATAGCCTGGCAGATTATATCAGGTGCCAAAACATTCCCTTTTATTCAAGCTCATAAGGAAGGGTaGGGGAATTACCCTTTAGAC +
Preference number: 5 (lower is better)
Translates to: CHIAWQIISGAKTFPFIQAHKEG*GNYPLD
Trigger: GTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGC...TTGAATAAAAGGGAATGTTTTGGCACCTGATATAATCTGCCAGGCTATGTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp CAATCAACTCTAAGATGCCCTAAACCCAAACAGTTCCCATTCAACTGTGCACAACTCCAACTCTCACCTTaGGAATTAAATAAACCTGGA +
Preference number: 5 (lower is better)
Translates to: QSTLRCPKPKQFPFNCAQLQLSP*ELNKPG
Trigger: TCCAGGTTTATTTAATTCCAAAGGTGAGAGTTGGAG...TTGTGCACAGTTGAATGGGAACTGTTTGGGTTTAGGGCATCTTAGAGTTGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp ATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAATTAAATAAACCTACCAGTGCATTGGGCTaGTTAGGGGAAACCATTCCT +
Preference number: 5 (lower is better)
Translates to: IDMEDISLQLSPLELNKPTSALG*LGETIP
Trigger: AGGAATGGTTTCCCCTAACAAGCCCAATGCACTGGT...AGGTTTATTTAATTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp TTGTTTATATGCTTTATGAAGGTCACTGCACTGTGGCAACAGTCCAACACTACTATAGTTGTAGCAACTTaGATTTCCCTGGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: LFICFMKVTALWQQSNTTIVVAT*ISLGFQ
Trigger: CTGGAAACCCAGGGAAATCAAAGTTGCTACAACTAT...AGTAGTGTTGGACTGTTGCCACAGTGCAGTGACCTTCATAAAGCATATAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS-3UTR CAA 90 bp AAGCTGCAACACATCTGGTTTAAGTGGAGCACAAAGGTAAGTTATTCCACATTCATAGTTGTAGCAACTTaGATTTCCCTGGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: KLQHIWFKWSTKVSYSTFIVVAT*ISLGFQ
Trigger: CTGGAAACCCAGGGAAATCAAAGTTGCTACAACTAT...GAATGTGGAATAACTTACCTTTGTGCTCCACTTAAACCAGATGTGTTGCAGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350592.7
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp AAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAATTAAATGTATCAATGAGTGCTTaGCGTACACCCTTGAAAGGC +
Preference number: 5 (lower is better)
Translates to: KGIDMEDISLQLSPLELNVSMSA*RTPLKG
Trigger: GCCTTTCAAGGGTGTACGCAAAGCACTCATTGATAC...ATTTAATTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp TCACAGAGTACTCTCCAATGTGTTATAGTTATCCTTAAAGCTCTTCAATTCAAGGCTCATAAGGAAGGGTaGGGGAATTACCCTTTAGAC +
Preference number: 5 (lower is better)
Translates to: SQSTLQCVIVILKALQFKAHKEG*GNYPLD
Trigger: GTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGC...CTTGAATTGAAGAGCTTTAAGGATAACTATAACACATTGGAGAGTACTCTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS-3UTR CAA 90 bp GTGCACAAAGGTATAGATATGGAAGACATCTCACTCCAACTCTCACCTTTGGAATGCAAAGCGCATGATTaGCCTCTTCACAAAAATAAA +
Preference number: 5 (lower is better)
Translates to: VHKGIDMEDISLQLSPLECKAHD*PLHKNK
Trigger: TTTATTTTTGTGAAGAGGCAAATCATGCGCTTTGCA...TTCCAAAGGTGAGAGTTGGAGTGAGATGTCTTCCATATCTATACCTTTGTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368521.10
ENST00000470180.2
ENST00000648267.1
CDS-3UTR CAA 90 bp TGTTCTAAAAATGCTCATAAGGAAGGGTTGGGGAATTACCCTTTAGACACAAGCTGCAAAGCGCATGATTaGCCTCTTCACAAAAATAAA +
Preference number: 5 (lower is better)
Translates to: CSKNAHKEGLGNYPLDTSCKAHD*PLHKNK
Trigger: TTTATTTTTGTGAAGAGGCAAATCATGCGCTTTGCA...GCTTGTGTCTAAAGGGTAATTCCCCAACCCTTCCTTATGAGCATTTTTAGAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS CCA 72 bp GCGCAGAATTGTTCGGGTTTACCCCGCTGTCCTGGCTaGTCAGCCCAGGCTCCGCCGAAGCGACGGCGCCTG +
Preference number: 6 (lower is better)
Translates to: AQNCSGLPRCPG*SAQAPPKRRRL
Trigger: CAGGCGCCGTCGCTTCGGCGGAGCCTGGGCTGACCAGCCAGGACAGCGGGGTAAACCCGAACAATTCTGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368516.1
ENST00000368518.5
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS CCA 72 bp CCTCGCGCAGAATTGTTCGGGTTTACCCCGCTGTCCTaGCTGGTCAGCCCAGGCTCCGCCGAAGCGACGGCG +
Preference number: 6 (lower is better)
Translates to: PRAELFGFTPLS*LVSPGSAEATA
Trigger: CGCCGTCGCTTCGGCGGAGCCTGGGCTGACCAGCCAGGACAGCGGGGTAAACCCGAACAATTCTGCGCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368516.1
ENST00000368518.5
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS CAA 72 bp CTGCCGGACGCCATGGCCTCCCTACCTCGCGCAGAATaGTTCGGGTTTACCCCGCTGTCCTGGCTGGTCAGC +
Preference number: 6 (lower is better)
Translates to: LPDAMASLPRAE*FGFTPLSWLVS
Trigger: GCTGACCAGCCAGGACAGCGGGGTAAACCCGAACAATTCTGCGCGAGGTAGGGAGGCCATGGCGTCCGGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368516.1
ENST00000368518.5
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS CAA 90 bp AGCCAGTTACTGCCGGACGCCATGGCCTCCCTACCTCGCGCAGAATaGTTCGGGTTTACCCCGCTGTCCTGGCTGGTCAGCCCAGGCTCC +
Preference number: 6 (lower is better)
Translates to: SQLLPDAMASLPRAE*FGFTPLSWLVSPGS
Trigger: GGAGCCTGGGCTGACCAGCCAGGACAGCGGGGTAAACCCGAACAATTCTGCGCGAGGTAGGGAGGCCATGGCGTCCGGCAGTAACTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368516.1
ENST00000368518.5
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS GCA 72 bp TCACCAGCACGACATTCACCCCGGAGAGCCAGTTACTaGCGGACGCCATGGCCTCCCTACCTCGCGCAGAAT +
Preference number: 6 (lower is better)
Translates to: SPARHSPRRASY*RTPWPPYLAQN
Trigger: ATTCTGCGCGAGGTAGGGAGGCCATGGCGTCCGGCAGTAACTGGCTCTCCGGGGTGAATGTCGTGCTGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368516.1
ENST00000368518.5
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS CCA 72 bp GCTCCCTCTGACACGTTCCCCTCCAAACTCACGCAGTaGCCAGCTCACTCAGGGCCTCCTGATAGCGTAGGT +
Preference number: 6 (lower is better)
Translates to: APSDTFPSKLTQ*PAHSGPPDSVG
Trigger: ACCTACGCTATCAGGAGGCCCTGAGTGAGCTGGCCACTGCGTGAGTTTGGAGGGGAACGTGTCAGAGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS CCA 72 bp CATTCACCCCGGAGAGCCAGTTACTGCCGGACGCCATaGCCTCCCTACCTCGCGCAGAATTGTTCGGGTTTA +
Preference number: 6 (lower is better)
Translates to: HSPRRASYCRTP*PPYLAQNCSGL
Trigger: TAAACCCGAACAATTCTGCGCGAGGTAGGGAGGCCATGGCGTCCGGCAGTAACTGGCTCTCCGGGGTGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368516.1
ENST00000368518.5
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS TCA 72 bp GTGGCAACAGTCCAACACTACTGTACCAGCTCCCTCTaGCACGTTCCCCTCCAAACTCACGCAGTGGCCAGC +
Preference number: 6 (lower is better)
Translates to: VATVQHYCTSSL*HVPLQTHAVAS
Trigger: GCTGGCCACTGCGTGAGTTTGGAGGGGAACGTGTCAGAGGGAGCTGGTACAGTAGTGTTGGACTGTTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368516.1
ENST00000368518.5
CDS TCA 72 bp TTGCCCATTAAGGAACGGGGATGCCGGCCTTCAGAATaGAATGGGATCTCTGTAATCCCAGCTACTCGGGAG +
Preference number: 6 (lower is better)
Translates to: LPIKERGCRPSE*NGISVIPATRE
Trigger: CTCCCGAGTAGCTGGGATTACAGAGATCCCATTTCATTCTGAAGGCCGGCATCCCCGTTCCTTAATGGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470180.2
CDS CAA 72 bp ATAGTCGTGAACAAAACTGGCATGGTGCCTGCATTCTaGAAGCTTACGGTCTTGGGGGCATTGTGTCCCACA +
Preference number: 6 (lower is better)
Translates to: IVVNKTGMVPAF*KLTVLGALCPT
Trigger: TGTGGGACACAATGCCCCCAAGACCGTAAGCTTCAAGAATGCAGGCACCATGCCAGTTTTGTTCACGACTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648267.1
CDS CCA 72 bp CTGGGCAACAGAGCAAGACTCCGTCAGAGGTACGAATaGCATCCAGAGCTTTCATCCTATACAGATAGTTGT +
Preference number: 6 (lower is better)
Translates to: LGNRARLRQRYE*HPELSSYTDSC
Trigger: ACAACTATCTGTATAGGATGAAAGCTCTGGATGCCATTCGTACCTCTGACGGAGTCTTGCTCTGTTGCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470180.2
CDS TCA 72 bp TCATCTGCAAGGAGCTGGGGCTCATACTTGATATCCTaGACCCTGGAGAGTCGAATATCAATCTCCTCTTTC +
Preference number: 6 (lower is better)
Translates to: SSARSWGSYLIS*TLESRISISSF
Trigger: GAAAGAGGAGATTGATATTCGACTCTCCAGGGTTCAGGATATCAAGTATGAGCCCCAGCTCCTTGCAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000350592.7
ENST00000362076.8
ENST00000368516.1
ENST00000368518.5
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS GCA 72 bp TCCCACAGGGACATGAGGTCCCCTTCGAGATTTCATTaGAAAGCGCATGATTTGCCTCTTCACAAAAATAAA +
Preference number: 6 (lower is better)
Translates to: SHRDMRSPSRFH*KAHDLPLHKNK
Trigger: TTTATTTTTGTGAAGAGGCAAATCATGCGCTTTGCAATGAAATCTCGAAGGGGACCTCATGTCCCTGTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000368518.5
ENST00000368519.5
ENST00000368521.10
ENST00000470180.2
ENST00000640799.1
ENST00000648267.1
CDS CCA 72 bp ATATCAATCTCCTCTTTCAAGTCTATGTGTAGGTCCTaGCTTTATAGTCGTGAACAAAACTGGCATGGTGCC +
Preference number: 6 (lower is better)
Translates to: ISISSFKSMCRS*LYSREQNWHGA
Trigger: GGCACCATGCCAGTTTTGTTCACGACTATAAAGCCAGGACCTACACATAGACTTGAAAGAGGAGATTGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648267.1