RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C1ORF226 (Homo sapiens)

Ensembl gene IDs: ENSG00000239887

Ensembl transcript IDs: ENST00000426197.2, ENST00000458626.4

Found 348 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGGCCACAGGAATCCCAGGAGGAGGATGCCGCACCGCCTGCCCTaGCCGGACGTGCCATTCCCAGCCTTCTCCCAGGGAACCGGCCAC +
Preference number: 1 (lower is better)
Translates to: GGHRNPRRRMPHRLP*PDVPFPAFSQGTGH
Trigger: GTGGCCGGTTCCCTGGGAGAAGGCTGGGAATGGCACGTCCGGCCAGGGCAGGCGGTGCGGCATCCTCCTCCTGGGATTCCTGTGGCCTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR GCA 90 bp ACAGGGGAGGCCACAGGAATCCCAGGAGGAGGATGCCGCACCGCCTaGCCTGGCCGGACGTGCCATTCCCAGCCTTCTCCCAGGGAACCG +
Preference number: 1 (lower is better)
Translates to: TGEATGIPGGGCRTA*PGRTCHSQPSPREP
Trigger: CGGTTCCCTGGGAGAAGGCTGGGAATGGCACGTCCGGCCAGGGCAGGCGGTGCGGCATCCTCCTCCTGGGATTCCTGTGGCCTCCCCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR GCA 90 bp GGAATCCCAGGAGGAGGATGCCGCACCGCCTGCCCTGGCCGGACGTaGCATTCCCAGCCTTCTCCCAGGGAACCGGCCACCTTGTTCAAG +
Preference number: 1 (lower is better)
Translates to: GIPGGGCRTACPGRT*HSQPSPREPATLFK
Trigger: CTTGAACAAGGTGGCCGGTTCCCTGGGAGAAGGCTGGGAATGGCACGTCCGGCCAGGGCAGGCGGTGCGGCATCCTCCTCCTGGGATTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR GCA 90 bp CGGGCCAGAGCCGCCCTGGGCTCCAGGAGAGGAGAAGCCCCAGAGTaGAGGGGCTTGCTAGGTTTCCCATCAAAGCACAAACCATGCTCC +
Preference number: 1 (lower is better)
Translates to: RARAALGSRRGEAPE*RGLLGFPSKHKPCS
Trigger: GGAGCATGGTTTGTGCTTTGATGGGAAACCTAGCAAGCCCCTGCACTCTGGGGCTTCTCCTCTCCTGGAGCCCAGGGCGGCTCTGGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR TCA 90 bp CAGCATAAAAGAAAGGCAGGCAAGGGCAGGGCGGGGCCGCTCCAGTaGGGTCCAGAGCTGCAGGAGGCCCAGGCAACTTCAGCACAAGCA +
Preference number: 1 (lower is better)
Translates to: QHKRKAGKGRAGPLQ*GPELQEAQATSAQA
Trigger: TGCTTGTGCTGAAGTTGCCTGGGCCTCCTGCAGCTCTGGACCTCACTGGAGCGGCCCCGCCCTGCCCTTGCCTGCCTTTCTTTTATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR TCA 90 bp GAGGCTTTGGATGGAAAGCTGGTCTGGGCCAAGGCCTCTGCAGGATaGGTAGTAGCTGTTCCTGCTGGGCTTTGGGCAGCCCCTAGACCC +
Preference number: 1 (lower is better)
Translates to: EALDGKLVWAKASAG*VVAVPAGLWAAPRP
Trigger: GGGTCTAGGGGCTGCCCAAAGCCCAGCAGGAACAGCTACTACTCATCCTGCAGAGGCCTTGGCCCAGACCAGCTTTCCATCCAAAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR GCA 90 bp ACACGTAAGCCCTGCTCACTCTACCAGGGCCTGCAGGTGCCCTACTaGAGTGACTCCTACGAGGGAGGGGAGACAGTTTGTGGTGAGCAC +
Preference number: 1 (lower is better)
Translates to: TRKPCSLYQGLQVPY*SDSYEGGETVCGEH
Trigger: GTGCTCACCACAAACTGTCTCCCCTCCCTCGTAGGAGTCACTGCAGTAGGGCACCTGCAGGCCCTGGTAGAGTGAGCAGGGCTTACGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR TCA 90 bp GGGAGAAACCTTGGGAACCCTGGGTGGCAGCGTTCAAACCCTGGGTaGACTCTCAAGGTCTCAGGCCTGGTAAGCATCTCCTCTGGCCTC +
Preference number: 1 (lower is better)
Translates to: GRNLGNPGWQRSNPG*TLKVSGLVSISSGL
Trigger: GAGGCCAGAGGAGATGCTTACCAGGCCTGAGACCTTGAGAGTTCACCCAGGGTTTGAACGCTGCCACCCAGGGTTCCCAAGGTTTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 90 bp GCCCTCCCCACAAAACCAAATCAGAGTGTGCTAGGCCGCATCTGCTaGGGCCTGGCTCTCCCTGTCTTCACACACTCAGCAAGAGAAGCC +
Preference number: 1 (lower is better)
Translates to: ALPTKPNQSVLGRIC*GLALPVFTHSAREA
Trigger: GGCTTCTCTTGCTGAGTGTGTGAAGACAGGGAGAGCCAGGCCCCAGCAGATGCGGCCTAGCACACTCTGATTTGGTTTTGTGGGGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR TCA 90 bp GTCATCAAGCCAAACACATCATTCCTCATCCAGCCTTCCTCCCGCTaGGGCCAGGGGCATCGGACCCATCAAGGAGGAGAGAGAAGGGAC +
Preference number: 1 (lower is better)
Translates to: VIKPNTSFLIQPSSR*GQGHRTHQGGERRD
Trigger: GTCCCTTCTCTCTCCTCCTTGATGGGTCCGATGCCCCTGGCCTCAGCGGGAGGAAGGCTGGATGAGGAATGATGTGTTTGGCTTGATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR GCA 90 bp GTGAGAAAGAATGTACACGTAAGCCCTGCTCACTCTACCAGGGCCTaGAGGTGCCCTACTGCAGTGACTCCTACGAGGGAGGGGAGACAG +
Preference number: 1 (lower is better)
Translates to: VRKNVHVSPAHSTRA*RCPTAVTPTREGRQ
Trigger: CTGTCTCCCCTCCCTCGTAGGAGTCACTGCAGTAGGGCACCTGCAGGCCCTGGTAGAGTGAGCAGGGCTTACGTGTACATTCTTTCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR GCA 90 bp AGGGTACTTAAGAAAGGCTGCACCTGCAATACCTGTACCTATGGCTaGCATATCATCGGGCCAGAGCCGCCCTGGGCTCCAGGAGAGGAG +
Preference number: 1 (lower is better)
Translates to: RVLKKGCTCNTCTYG*HIIGPEPPWAPGEE
Trigger: CTCCTCTCCTGGAGCCCAGGGCGGCTCTGGCCCGATGATATGGCAGCCATAGGTACAGGTATTGCAGGTGCAGCCTTTCTTAAGTACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 90 bp AGCTCCCAGAGAAGCTGGACTCACTGTGCGGGATTACTGAGGGTGTaGCTGCCAGGCTACAGTCACAGGAAGGCCAGACTGTTGAGATGG +
Preference number: 1 (lower is better)
Translates to: SSQRSWTHCAGLLRV*LPGYSHRKARLLRW
Trigger: CCATCTCAACAGTCTGGCCTTCCTGTGACTGTAGCCTGGCAGCCACACCCTCAGTAATCCCGCACAGTGAGTCCAGCTTCTCTGGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 90 bp AGATGGGAGAAACCTTGGGAACCCTGGGTGGCAGCGTTCAAACCCTaGGTGAACTCTCAAGGTCTCAGGCCTGGTAAGCATCTCCTCTGG +
Preference number: 1 (lower is better)
Translates to: RWEKPWEPWVAAFKP*VNSQGLRPGKHLLW
Trigger: CCAGAGGAGATGCTTACCAGGCCTGAGACCTTGAGAGTTCACCCAGGGTTTGAACGCTGCCACCCAGGGTTCCCAAGGTTTCTCCCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR TCA 90 bp TGGAGCAGGGTCCCATGGCACTGTATTCAGTATCAGACACAGGTCTaGAGAACTCTGGGGTCACCCTGGCAATGGTCCTGGACAACCTGG +
Preference number: 1 (lower is better)
Translates to: WSRVPWHCIQYQTQV*RTLGSPWQWSWTTW
Trigger: CCAGGTTGTCCAGGACCATTGCCAGGGTGACCCCAGAGTTCTTCAGACCTGTGTCTGATACTGAATACAGTGCCATGGGACCCTGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 90 bp CTGGTGGCCCTGCAATTCACTGAGAAGACAGGACAAGCTCAAGAGTaGAAGAGCTCTAATGTCCAAGGGCTGCAGCCCACTCAGAGGAGG +
Preference number: 1 (lower is better)
Translates to: LVALQFTEKTGQAQE*KSSNVQGLQPTQRR
Trigger: CCTCCTCTGAGTGGGCTGCAGCCCTTGGACATTAGAGCTCTTCCACTCTTGAGCTTGTCCTGTCTTCTCAGTGAATTGCAGGGCCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 90 bp AACATCCCTGCAGCAGGGGGACGGGCAGGTTGTAGGCAGTTAGATTaGAGCAGGGTCCCATGGCACTGTATTCAGTATCAGACACAGGTC +
Preference number: 1 (lower is better)
Translates to: NIPAAGGRAGCRQLD*SRVPWHCIQYQTQV
Trigger: GACCTGTGTCTGATACTGAATACAGTGCCATGGGACCCTGCTCCAATCTAACTGCCTACAACCTGCCCGTCCCCCTGCTGCAGGGATGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 90 bp CTGCCAGGCTACAGTCACAGGAAGGCCAGACTGTTGAGATGGACATaGAAACCAGGTGAGGCTTTGGATGGAAAGCTGGTCTGGGCCAAG +
Preference number: 1 (lower is better)
Translates to: LPGYSHRKARLLRWT*KPGEALDGKLVWAK
Trigger: CTTGGCCCAGACCAGCTTTCCATCCAAAGCCTCACCTGGTTTCCATGTCCATCTCAACAGTCTGGCCTTCCTGTGACTGTAGCCTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 90 bp GTGTGGCTGCCAGGCTACAGTCACAGGAAGGCCAGACTGTTGAGATaGACATGGAAACCAGGTGAGGCTTTGGATGGAAAGCTGGTCTGG +
Preference number: 1 (lower is better)
Translates to: VWLPGYSHRKARLLR*TWKPGEALDGKLVW
Trigger: CCAGACCAGCTTTCCATCCAAAGCCTCACCTGGTTTCCATGTCCATCTCAACAGTCTGGCCTTCCTGTGACTGTAGCCTGGCAGCCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR TCA 90 bp GTGACTCCTACGAGGGAGGGGAGACAGTTTGTGGTGAGCACGTGGTaGAACCTGGCTTTCTGGGAGAAGGAAGACAATGGAAGGCAAGGT +
Preference number: 1 (lower is better)
Translates to: VTPTREGRQFVVSTW*NLAFWEKEDNGRQG
Trigger: ACCTTGCCTTCCATTGTCTTCCTTCTCCCAGAAAGCCAGGTTTCACCACGTGCTCACCACAAACTGTCTCCCCTCCCTCGTAGGAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 90 bp CTTCCGTGCAGAATGCCCACATTTTGTGTTCGACATCTGACCAGATaGGAGAAACCTTGGGAACCCTGGGTGGCAGCGTTCAAACCCTGG +
Preference number: 1 (lower is better)
Translates to: LPCRMPTFCVRHLTR*EKPWEPWVAAFKPW
Trigger: CCAGGGTTTGAACGCTGCCACCCAGGGTTCCCAAGGTTTCTCCCATCTGGTCAGATGTCGAACACAAAATGTGGGCATTCTGCACGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR GCA 90 bp GGAAGACAGCACAATAGGCCCCTGGTGGGAGACCTAAAAGTGGGTTaGAGGAACCAGTTAAGGCTGGATGAACCTGGTCAGTCCCTTACA +
Preference number: 1 (lower is better)
Translates to: GRQHNRPLVGDLKVG*RNQLRLDEPGQSLT
Trigger: TGTAAGGGACTGACCAGGTTCATCCAGCCTTAACTGGTTCCTGCAACCCACTTTTAGGTCTCCCACCAGGGGCCTATTGTGCTGTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 90 bp TTTTGTGTTCGACATCTGACCAGATGGGAGAAACCTTGGGAACCCTaGGTGGCAGCGTTCAAACCCTGGGTGAACTCTCAAGGTCTCAGG +
Preference number: 1 (lower is better)
Translates to: FCVRHLTRWEKPWEP*VAAFKPWVNSQGLR
Trigger: CCTGAGACCTTGAGAGTTCACCCAGGGTTTGAACGCTGCCACCCAGGGTTCCCAAGGTTTCTCCCATCTGGTCAGATGTCGAACACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 90 bp TCCCATGGCACTGTATTCAGTATCAGACACAGGTCTGAAGAACTCTaGGGTCACCCTGGCAATGGTCCTGGACAACCTGGTGGGATCCTT +
Preference number: 1 (lower is better)
Translates to: SHGTVFSIRHRSEEL*GHPGNGPGQPGGIL
Trigger: AAGGATCCCACCAGGTTGTCCAGGACCATTGCCAGGGTGACCCCAGAGTTCTTCAGACCTGTGTCTGATACTGAATACAGTGCCATGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR TCA 90 bp GATCTTTCCTTCCGTGCAGAATGCCCACATTTTGTGTTCGACATCTaGCCAGATGGGAGAAACCTTGGGAACCCTGGGTGGCAGCGTTCA +
Preference number: 1 (lower is better)
Translates to: DLSFRAECPHFVFDI*PDGRNLGNPGWQRS
Trigger: TGAACGCTGCCACCCAGGGTTCCCAAGGTTTCTCCCATCTGGTCAGATGTCGAACACAAAATGTGGGCATTCTGCACGGAAGGAAAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR TCA 90 bp TGGGGCCTGGCTCTCCCTGTCTTCACACACTCAGCAAGAGAAGCCTaGTCTTTCCTTCCGTGCAGAATGCCCACATTTTGTGTTCGACAT +
Preference number: 1 (lower is better)
Translates to: WGLALPVFTHSAREA*SFLPCRMPTFCVRH
Trigger: ATGTCGAACACAAAATGTGGGCATTCTGCACGGAAGGAAAGATCAGGCTTCTCTTGCTGAGTGTGTGAAGACAGGGAGAGCCAGGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR GCA 90 bp TTCCATATCAGCCACATACACAACATTCAGATACACTTCCCTCTGTaGAGGGGGATACACCAGCCTCCTGCCAGGTTCTGGAAGCTCACC +
Preference number: 1 (lower is better)
Translates to: FHISHIHNIQIHFPL*RGIHQPPARFWKLT
Trigger: GGTGAGCTTCCAGAACCTGGCAGGAGGCTGGTGTATCCCCCTGCACAGAGGGAAGTGTATCTGAATGTTGTGTATGTGGCTGATATGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 90 bp ACTACTCAAGGACTTCCAGTCCTGCAAAATCCCATGATGGACGACTaGCTCTCTGCTGGTGCCTCATACAAGGAAGACAAAGGGCACAGC +
Preference number: 1 (lower is better)
Translates to: TTQGLPVLQNPMMDD*LSAGASYKEDKGHS
Trigger: GCTGTGCCCTTTGTCTTCCTTGTATGAGGCACCAGCAGAGAGCCAGTCGTCCATCATGGGATTTTGCAGGACTGGAAGTCCTTGAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 90 bp ATGCCCACATTTTGTGTTCGACATCTGACCAGATGGGAGAAACCTTaGGAACCCTGGGTGGCAGCGTTCAAACCCTGGGTGAACTCTCAA +
Preference number: 1 (lower is better)
Translates to: MPTFCVRHLTRWEKP*EPWVAAFKPWVNSQ
Trigger: TTGAGAGTTCACCCAGGGTTTGAACGCTGCCACCCAGGGTTCCCAAGGTTTCTCCCATCTGGTCAGATGTCGAACACAAAATGTGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 90 bp GGGCTTGCTAGGTTTCCCATCAAAGCACAAACCATGCTCCTGGTATaGGAAGCTCAGATGAAGTGGCTTGCTCCCAGGATGTGTGTTTGG +
Preference number: 1 (lower is better)
Translates to: GLARFPIKAQTMLLV*EAQMKWLAPRMCVW
Trigger: CCAAACACACATCCTGGGAGCAAGCCACTTCATCTGAGCTTCCCATACCAGGAGCATGGTTTGTGCTTTGATGGGAAACCTAGCAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR TCA 90 bp GGTGGGAGACCTAAAAGTGGGTTGCAGGAACCAGTTAAGGCTGGATaGACCTGGTCAGTCCCTTACATGGATCCTGAAGCAGGAAAAAGC +
Preference number: 1 (lower is better)
Translates to: GGRPKSGLQEPVKAG*TWSVPYMDPEAGKS
Trigger: GCTTTTTCCTGCTTCAGGATCCATGTAAGGGACTGACCAGGTTCATCCAGCCTTAACTGGTTCCTGCAACCCACTTTTAGGTCTCCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR TCA 90 bp TTCCCATCAAAGCACAAACCATGCTCCTGGTATGGGAAGCTCAGATaGAGTGGCTTGCTCCCAGGATGTGTGTTTGGGGACTCTATCCCT +
Preference number: 1 (lower is better)
Translates to: FPSKHKPCSWYGKLR*SGLLPGCVFGDSIP
Trigger: AGGGATAGAGTCCCCAAACACACATCCTGGGAGCAAGCCACTTCATCTGAGCTTCCCATACCAGGAGCATGGTTTGTGCTTTGATGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR GCA 90 bp CATTCAGATACACTTCCCTCTGTGCAGGGGGATACACCAGCCTCCTaGCAGGTTCTGGAAGCTCACCTTATAATCTACCAGGATACAGCT +
Preference number: 1 (lower is better)
Translates to: HSDTLPSVQGDTPAS*QVLEAHLIIYQDTA
Trigger: AGCTGTATCCTGGTAGATTATAAGGTGAGCTTCCAGAACCTGGCAGGAGGCTGGTGTATCCCCCTGCACAGAGGGAAGTGTATCTGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR GCA 90 bp AGACAGGACAAGCTCAAGAGTGGAAGAGCTCTAATGTCCAAGGGCTaGAGCCCACTCAGAGGAGGTTACAGAAAATTAGGCTCAAAACGG +
Preference number: 1 (lower is better)
Translates to: RQDKLKSGRALMSKG*SPLRGGYRKLGSKR
Trigger: CCGTTTTGAGCCTAATTTTCTGTAACCTCCTCTGAGTGGGCTGCAGCCCTTGGACATTAGAGCTCTTCCACTCTTGAGCTTGTCCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 90 bp ATCAAAGCACAAACCATGCTCCTGGTATGGGAAGCTCAGATGAAGTaGCTTGCTCCCAGGATGTGTGTTTGGGGACTCTATCCCTATCCT +
Preference number: 1 (lower is better)
Translates to: IKAQTMLLVWEAQMK*LAPRMCVWGLYPYP
Trigger: AGGATAGGGATAGAGTCCCCAAACACACATCCTGGGAGCAAGCCACTTCATCTGAGCTTCCCATACCAGGAGCATGGTTTGTGCTTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 90 bp GGACAGGCAAAAAGAATTCCTGTAAGATCCATTGTCCTGAGCTGGTaGCCCTGCAATTCACTGAGAAGACAGGACAAGCTCAAGAGTGGA +
Preference number: 1 (lower is better)
Translates to: GQAKRIPVRSIVLSW*PCNSLRRQDKLKSG
Trigger: TCCACTCTTGAGCTTGTCCTGTCTTCTCAGTGAATTGCAGGGCCACCAGCTCAGGACAATGGATCTTACAGGAATTCTTTTTGCCTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 90 bp AGGGGACAGGCAAAAAGAATTCCTGTAAGATCCATTGTCCTGAGCTaGTGGCCCTGCAATTCACTGAGAAGACAGGACAAGCTCAAGAGT +
Preference number: 1 (lower is better)
Translates to: RGQAKRIPVRSIVLS*WPCNSLRRQDKLKS
Trigger: ACTCTTGAGCTTGTCCTGTCTTCTCAGTGAATTGCAGGGCCACCAGCTCAGGACAATGGATCTTACAGGAATTCTTTTTGCCTGTCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 90 bp TGCAGGAACCAGTTAAGGCTGGATGAACCTGGTCAGTCCCTTACATaGATCCTGAAGCAGGAAAAAGCCCACCAGCATCAGCATAAAAGA +
Preference number: 1 (lower is better)
Translates to: CRNQLRLDEPGQSLT*ILKQEKAHQHQHKR
Trigger: TCTTTTATGCTGATGCTGGTGGGCTTTTTCCTGCTTCAGGATCCATGTAAGGGACTGACCAGGTTCATCCAGCCTTAACTGGTTCCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR GCA 90 bp GCAAAAAGAATTCCTGTAAGATCCATTGTCCTGAGCTGGTGGCCCTaGAATTCACTGAGAAGACAGGACAAGCTCAAGAGTGGAAGAGCT +
Preference number: 1 (lower is better)
Translates to: AKRIPVRSIVLSWWP*NSLRRQDKLKSGRA
Trigger: AGCTCTTCCACTCTTGAGCTTGTCCTGTCTTCTCAGTGAATTGCAGGGCCACCAGCTCAGGACAATGGATCTTACAGGAATTCTTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR TCA 90 bp TCCTCCTCCTCCTCCGAACTGGAGCCAATCTTCTTCTTTAAACGCTaGTGGATTGCATACATGTATGTCTTCCATATCAGCCACATACAC +
Preference number: 1 (lower is better)
Translates to: SSSSSELEPIFFFKR*WIAYMYVFHISHIH
Trigger: GTGTATGTGGCTGATATGGAAGACATACATGTATGCAATCCATCAGCGTTTAAAGAAGAAGATTGGCTCCAGTTCGGAGGAGGAGGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR GCA 90 bp TGTACCTATGGCTGCCATATCATCGGGCCAGAGCCGCCCTGGGCTCCAGGAGAGTGCCCTGGCCGGACGTaGCATTCCCAGCCTTCTCCC +
Preference number: 2 (lower is better)
Translates to: CTYGCHIIGPEPPWAPGECPGRT*HSQPSP
Trigger: GGGAGAAGGCTGGGAATGGCACGTCCGGCCAGGGCA...CTCTCCTGGAGCCCAGGGCGGCTCTGGCCCGATGATATGGCAGCCATAGGTACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CCA 90 bp CCTATGGCTGCCATATCATCGGGCCAGAGCCGCCCTGGGCTCCAGGAGAGGAGAGCTATGGCTGGGCTGTaGTCAGGGTGTGTGGCTTTC +
Preference number: 2 (lower is better)
Translates to: PMAAISSGQSRPGLQERRAMAGL*SGCVAF
Trigger: GAAAGCCACACACCCTGACCACAGCCCAGCCATAGC...TCTCCTCTCCTGGAGCCCAGGGCGGCTCTGGCCCGATGATATGGCAGCCATAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CAA 90 bp GCCGCCCTGGGCTCCAGGAGAGGAGAAGCCCCAGAGTGCAGGGGCTaGCTAGGTTTCCCATCAAAGCACAAACCATGCTCCTGGTATGGG +
Preference number: 2 (lower is better)
Translates to: AALGSRRGEAPECRG*LGFPSKHKPCSWYG
Trigger: CCCATACCAGGAGCATGGTTTGTGCTTTGATGGGAAACCTAGCAAGCCCCTGCACTCTGGGGCTTCTCCTCTCCTGGAGCCCAGGGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR TCA 90 bp TGTGGTCAGGGTGTGTGGCTTTCTAGGCCATGGCCTGTCATCAAGCCAAACACACAGCCTTCCTCCCGCTaGGGCCAGGGGCATCGGACC +
Preference number: 2 (lower is better)
Translates to: CGQGVWLSRPWPVIKPNTQPSSR*GQGHRT
Trigger: GGTCCGATGCCCCTGGCCTCAGCGGGAGGAAGGCTG...TGTGTTTGGCTTGATGACAGGCCATGGCCTAGAAAGCCACACACCCTGACCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR GCA 90 bp TGTACCTATGGCTGCCATATCATCGGGCCAGAGCCGCCCTGGGCTCCAGGAGAGCTGCAGGTGCCCTACTaGAGTGACTCCTACGAGGGA +
Preference number: 2 (lower is better)
Translates to: CTYGCHIIGPEPPWAPGELQVPY*SDSYEG
Trigger: TCCCTCGTAGGAGTCACTGCAGTAGGGCACCTGCAG...CTCTCCTGGAGCCCAGGGCGGCTCTGGCCCGATGATATGGCAGCCATAGGTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CCA 90 bp TGTACCTATGGCTGCCATATCATCGGGCCAGAGCCGCCCTGGGCTCCAGGAGAGAGATGGGAGAAACCTTaGGAACCCTGGGTGGCAGCG +
Preference number: 2 (lower is better)
Translates to: CTYGCHIIGPEPPWAPGERWEKP*EPWVAA
Trigger: CGCTGCCACCCAGGGTTCCCAAGGTTTCTCCCATCT...CTCTCCTGGAGCCCAGGGCGGCTCTGGCCCGATGATATGGCAGCCATAGGTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CAA 90 bp TGGGGTCACCCTGGCAATGGTCCTGGACAACCTGGTGGGATCCTTTaGCTCATCCTGGGTCTAAGGTCCTGGACTCCAGCAGCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: WGHPGNGPGQPGGIL*LILGLRSWTPAAAG
Trigger: CCCAGCTGCTGCTGGAGTCCAGGACCTTAGACCCAGGATGAGCAAAAGGATCCCACCAGGTTGTCCAGGACCATTGCCAGGGTGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CCA 90 bp CCTATGGCTGCCATATCATCGGGCCAGAGCCGCCCTGGGCTCCAGGAGAGGAGAGTACATGCTTCATTCTaGCTCTCACAGCAGGCCCAG +
Preference number: 2 (lower is better)
Translates to: PMAAISSGQSRPGLQERRVHASF*LSQQAQ
Trigger: CTGGGCCTGCTGTGAGAGCCAGAATGAAGCATGTAC...TCTCCTCTCCTGGAGCCCAGGGCGGCTCTGGCCCGATGATATGGCAGCCATAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CAA 90 bp TCTCTGCTGGTGCCTCATACAAGGAAGACAAAGGGCACAGCGGAGTaGAGGCCAGGGCCAGTGTGCGCAGTGGAGGAGAAAGCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: SLLVPHTRKTKGTAE*RPGPVCAVEEKAAG
Trigger: TCCTGCTGCTTTCTCCTCCACTGCGCACACTGGCCCTGGCCTCAACTCCGCTGTGCCCTTTGTCTTCCTTGTATGAGGCACCAGCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR TCA 90 bp GGATACACCAGCCTCCTGCCAGGTTCTGGAAGCTCACCTTATAATCTACCAGGAAGGGCACAGCGGAGTTaGGGCCAGGGCCAGTGTGCG +
Preference number: 2 (lower is better)
Translates to: GYTSLLPGSGSSPYNLPGRAQRS*GQGQCA
Trigger: CGCACACTGGCCCTGGCCTCAACTCCGCTGTGCCCT...TCCTGGTAGATTATAAGGTGAGCTTCCAGAACCTGGCAGGAGGCTGGTGTATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR GCA 90 bp TCAGATACACTTCCCTCTGTGCAGGGGGATACACCAGCCTCCTGCCAGGTTCTGTGGCAACCAGGGGCCTaGACTGTCCTGGGACCAAGA +
Preference number: 2 (lower is better)
Translates to: SDTLPSVQGDTPASCQVLWQPGA*TVLGPR
Trigger: TCTTGGTCCCAGGACAGTGCAGGCCCCTGGTTGCCA...CAGAACCTGGCAGGAGGCTGGTGTATCCCCCTGCACAGAGGGAAGTGTATCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR GCA 90 bp CCCGAGGTAGCAGCAACATCCCTGCAGCAGGGGGACGGGCAGGTTGTAGGCAGTCCTTCTCCCTGCTTCTaGTCTGGGTTTTTAGCACCA +
Preference number: 2 (lower is better)
Translates to: PEVAATSLQQGDGQVVGSPSPCF*SGFLAP
Trigger: TGGTGCTAAAAACCCAGAGCAGAAGCAGGGAGAAGG...ACTGCCTACAACCTGCCCGTCCCCCTGCTGCAGGGATGTTGCTGCTACCTCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CCA 90 bp CCTATGGCTGCCATATCATCGGGCCAGAGCCGCCCTGGGCTCCAGGAGAGGAGAGAAGCTCAGATGAAGTaGCTTGCTCCCAGGATGTGT +
Preference number: 2 (lower is better)
Translates to: PMAAISSGQSRPGLQERREAQMK*LAPRMC
Trigger: ACACATCCTGGGAGCAAGCCACTTCATCTGAGCTTC...TCTCCTCTCCTGGAGCCCAGGGCGGCTCTGGCCCGATGATATGGCAGCCATAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CAA 90 bp GGCCGGACGTGCCATTCCCAGCCTTCTCCCAGGGAACCGGCCACCTaGTTCAAGAAAAAGAACGTTCTCCTCTTGCTGCAAAGAGCCCCA +
Preference number: 2 (lower is better)
Translates to: GRTCHSQPSPREPAT*FKKKNVLLLLQRAP
Trigger: TGGGGCTCTTTGCAGCAAGAGGAGAACGTTCTTTTTCTTGAACAAGGTGGCCGGTTCCCTGGGAGAAGGCTGGGAATGGCACGTCCGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR GCA 90 bp TCAGATACACTTCCCTCTGTGCAGGGGGATACACCAGCCTCCTGCCAGGTTCTGGGAGAAGCCCCAGAGTaGAGGGGCTTGCTAGGTTTC +
Preference number: 2 (lower is better)
Translates to: SDTLPSVQGDTPASCQVLGEAPE*RGLLGF
Trigger: GAAACCTAGCAAGCCCCTGCACTCTGGGGCTTCTCC...CAGAACCTGGCAGGAGGCTGGTGTATCCCCCTGCACAGAGGGAAGTGTATCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CCA 90 bp GGACAACCTGGTGGGATCCTTTTGCTCATCCTGGGTCTAAGGTCCTGGACTCCACTTGGGAACCCTGGGTaGCAGCGTTCAAACCCTGGG +
Preference number: 2 (lower is better)
Translates to: GQPGGILLLILGLRSWTPLGNPG*QRSNPG
Trigger: CCCAGGGTTTGAACGCTGCCACCCAGGGTTCCCAAG...TGGAGTCCAGGACCTTAGACCCAGGATGAGCAAAAGGATCCCACCAGGTTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR TCA 90 bp CCCGAGGTAGCAGCAACATCCCTGCAGCAGGGGGACGGGCAGGTTGTAGGCAGTTTTGTGTTCGACATCTaGCCAGATGGGAGAAACCTT +
Preference number: 2 (lower is better)
Translates to: PEVAATSLQQGDGQVVGSFVFDI*PDGRNL
Trigger: AAGGTTTCTCCCATCTGGTCAGATGTCGAACACAAA...ACTGCCTACAACCTGCCCGTCCCCCTGCTGCAGGGATGTTGCTGCTACCTCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR TCA 90 bp GGACAACCTGGTGGGATCCTTTTGCTCATCCTGGGTCTAAGGTCCTGGACTCCACTGCAAGGTGGCCCCTaGAAAGCTGTTCTGATCCCC +
Preference number: 2 (lower is better)
Translates to: GQPGGILLLILGLRSWTPLQGGP*KAVLIP
Trigger: GGGGATCAGAACAGCTTTTCAGGGGCCACCTTGCAG...TGGAGTCCAGGACCTTAGACCCAGGATGAGCAAAAGGATCCCACCAGGTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR TCA 90 bp GGACAACCTGGTGGGATCCTTTTGCTCATCCTGGGTCTAAGGTCCTGGACTCCAGTGGTGAGCACGTGGTaGAACCTGGCTTTCTGGGAG +
Preference number: 2 (lower is better)
Translates to: GQPGGILLLILGLRSWTPVVSTW*NLAFWE
Trigger: CTCCCAGAAAGCCAGGTTTCACCACGTGCTCACCAC...TGGAGTCCAGGACCTTAGACCCAGGATGAGCAAAAGGATCCCACCAGGTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR GCA 90 bp TCAGATACACTTCCCTCTGTGCAGGGGGATACACCAGCCTCCTGCCAGGTTCTGGGACGACTGGCTCTCTaGTGGTGCCTCATACAAGGA +
Preference number: 2 (lower is better)
Translates to: SDTLPSVQGDTPASCQVLGRLAL*WCLIQG
Trigger: TCCTTGTATGAGGCACCAGCAGAGAGCCAGTCGTCC...CAGAACCTGGCAGGAGGCTGGTGTATCCCCCTGCACAGAGGGAAGTGTATCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR GCA 90 bp GATAAAAGACCTTGTGGTCCCAACTTCCTTATGTGGACAGAGAAGATAGGTCCTGGATGCCGCACCGCCTaGCCTGGCCGGACGTGCCAT +
Preference number: 2 (lower is better)
Translates to: DKRPCGPNFLMWTEKIGPGCRTA*PGRTCH
Trigger: ATGGCACGTCCGGCCAGGGCAGGCGGTGCGGCATCC...AGGACCTATCTTCTCTGTCCACATAAGGAAGTTGGGACCACAAGGTCTTTTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR GCA 90 bp GTACTTAAGAAAGGCTGCACCTGCAATACCTGTACCTATGGCTGCCATATCATCATCCCAGGAGGAGGATaGCGCACCGCCTGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: VLKKGCTCNTCTYGCHIIIPGGG*RTACPG
Trigger: GCCAGGGCAGGCGGTGCGGCATCCTCCTCCTGGGAT...GATGATATGGCAGCCATAGGTACAGGTATTGCAGGTGCAGCCTTTCTTAAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR GCA 90 bp TCAGATACACTTCCCTCTGTGCAGGGGGATACACCAGCCTCCTGCCAGGTTCTGAAGCTGGACTCACTGTaGGGGATTACTGAGGGTGTG +
Preference number: 2 (lower is better)
Translates to: SDTLPSVQGDTPASCQVLKLDSL*GITEGV
Trigger: CACACCCTCAGTAATCCCGCACAGTGAGTCCAGCTT...CAGAACCTGGCAGGAGGCTGGTGTATCCCCCTGCACAGAGGGAAGTGTATCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CCA 90 bp TATGTGCAGCATCTAAGACCAGACACCAGTCTCAGAGAGCCTCCCGAGGTAGCAGGCCAGTGTGCGCAGTaGAGGAGAAAGCAGCAGGAA +
Preference number: 2 (lower is better)
Translates to: YVQHLRPDTSLREPPEVAGQCAQ*RRKQQE
Trigger: TTCCTGCTGCTTTCTCCTCCACTGCGCACACTGGCC...TGCTACCTCGGGAGGCTCTCTGAGACTGGTGTCTGGTCTTAGATGCTGCACATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CCA 90 bp CTTCTGCTCTGGGTTTTTAGCACCAGCTCTGAATGCCAAGACCACCCCCAAGTTGGGGCAGAGCAAACATaGCAACCAGGGGCCTGCACT +
Preference number: 2 (lower is better)
Translates to: LLLWVFSTSSECQDHPQVGAEQT*QPGACT
Trigger: AGTGCAGGCCCCTGGTTGCCATGTTTGCTCTGCCCC...AACTTGGGGGTGGTCTTGGCATTCAGAGCTGGTGCTAAAAACCCAGAGCAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CCA 90 bp TGGATCCTGAAGCAGGAAAAAGCCCACCAGCATCAGCATAAAAGAAAGGCAGGCGGTAAGCATCTCCTCTaGCCTCCACCCCAGGGGCAG +
Preference number: 2 (lower is better)
Translates to: WILKQEKAHQHQHKRKAGGKHLL*PPPQGQ
Trigger: CTGCCCCTGGGGTGGAGGCCAGAGGAGATGCTTACC...GCCTGCCTTTCTTTTATGCTGATGCTGGTGGGCTTTTTCCTGCTTCAGGATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR TCA 90 bp TCAGACACAGGTCTGAAGAACTCTGGGGTCACCCTGGCAATGGTCCTGGACAACGGCCCTGCAATTCACTaGGAAGACAGGACAAGCTCA +
Preference number: 2 (lower is better)
Translates to: SDTGLKNSGVTLAMVLDNGPAIH*EDRTSS
Trigger: TGAGCTTGTCCTGTCTTCTCAGTGAATTGCAGGGCC...GTTGTCCAGGACCATTGCCAGGGTGACCCCAGAGTTCTTCAGACCTGTGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR TCA 90 bp TCAGATACACTTCCCTCTGTGCAGGGGGATACACCAGCCTCCTGCCAGGTTCTGTGGGAAGCCAAACAATaGATAGAACAGGGGAGGCCA +
Preference number: 2 (lower is better)
Translates to: SDTLPSVQGDTPASCQVLWEAKQ*IEQGRP
Trigger: TGGCCTCCCCTGTTCTATTCATTGTTTGGCTTCCCA...CAGAACCTGGCAGGAGGCTGGTGTATCCCCCTGCACAGAGGGAAGTGTATCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR GCA 90 bp GGACAACCTGGTGGGATCCTTTTGCTCATCCTGGGTCTAAGGTCCTGGACTCCACTGCAGAAGCAAGCATaGAGGAAGGAACCCACATCC +
Preference number: 2 (lower is better)
Translates to: GQPGGILLLILGLRSWTPLQKQA*RKEPTS
Trigger: GGATGTGGGTTCCTTCCTGCATGCTTGCTTCTGCAG...TGGAGTCCAGGACCTTAGACCCAGGATGAGCAAAAGGATCCCACCAGGTTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CCA 90 bp AGGCCGCATCTGCTGGGGCCTGGCTCTCCCTGTCTTCACACACTCAGCAAGAGAGGACAAGCTCAAGAGTaGAAGAGCTCTAATGTCCAA +
Preference number: 2 (lower is better)
Translates to: RPHLLGPGSPCLHTLSKRGQAQE*KSSNVQ
Trigger: TTGGACATTAGAGCTCTTCCACTCTTGAGCTTGTCC...TCTCTTGCTGAGTGTGTGAAGACAGGGAGAGCCAGGCCCCAGCAGATGCGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CCA 90 bp TATGTGCAGCATCTAAGACCAGACACCAGTCTCAGAGAGCCTCCCGAGGTAGCAAAGAGGAGCTATGGCTaGGCTGTGGTCAGGGTGTGT +
Preference number: 2 (lower is better)
Translates to: YVQHLRPDTSLREPPEVAKRSYG*AVVRVC
Trigger: ACACACCCTGACCACAGCCCAGCCATAGCTCCTCTT...TGCTACCTCGGGAGGCTCTCTGAGACTGGTGTCTGGTCTTAGATGCTGCACATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CCA 90 bp CTTCTGCTCTGGGTTTTTAGCACCAGCTCTGAATGCCAAGACCACCCCCAAGTTGACCAAGAGGAGCTATaGCTGGGCTGTGGTCAGGGT +
Preference number: 2 (lower is better)
Translates to: LLLWVFSTSSECQDHPQVDQEEL*LGCGQG
Trigger: ACCCTGACCACAGCCCAGCCATAGCTCCTCTTGGTC...AACTTGGGGGTGGTCTTGGCATTCAGAGCTGGTGCTAAAAACCCAGAGCAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR TCA 90 bp TCAGATACACTTCCCTCTGTGCAGGGGGATACACCAGCCTCCTGCCAGGTTCTGCTCTGGTGTTTTGTGTaGTACCCCAAACCATTCTGG +
Preference number: 2 (lower is better)
Translates to: SDTLPSVQGDTPASCQVLLWCFV*YPKPFW
Trigger: CCAGAATGGTTTGGGGTATCACACAAAACACCAGAG...CAGAACCTGGCAGGAGGCTGGTGTATCCCCCTGCACAGAGGGAAGTGTATCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR GCA 90 bp GGATACACCAGCCTCCTGCCAGGTTCTGGAAGCTCACCTTATAATCTACCAGGACTAATGTCCAAGGGCTaGAGCCCACTCAGAGGAGGT +
Preference number: 2 (lower is better)
Translates to: GYTSLLPGSGSSPYNLPGLMSKG*SPLRGG
Trigger: ACCTCCTCTGAGTGGGCTGCAGCCCTTGGACATTAG...TCCTGGTAGATTATAAGGTGAGCTTCCAGAACCTGGCAGGAGGCTGGTGTATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR GCA 90 bp TCAGATACACTTCCCTCTGTGCAGGGGGATACACCAGCCTCCTGCCAGGTTCTGTCAGATGAAGTGGCTTaGTCCCAGGATGTGTGTTTG +
Preference number: 2 (lower is better)
Translates to: SDTLPSVQGDTPASCQVLSDEVA*SQDVCL
Trigger: CAAACACACATCCTGGGAGCAAGCCACTTCATCTGA...CAGAACCTGGCAGGAGGCTGGTGTATCCCCCTGCACAGAGGGAAGTGTATCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR GCA 90 bp TCAGATACACTTCCCTCTGTGCAGGGGGATACACCAGCCTCCTGCCAGGTTCTGAAGAAAGGCTGCACCTaGAATACCTGTACCTATGGC +
Preference number: 2 (lower is better)
Translates to: SDTLPSVQGDTPASCQVLKKGCT*NTCTYG
Trigger: GCCATAGGTACAGGTATTGCAGGTGCAGCCTTTCTT...CAGAACCTGGCAGGAGGCTGGTGTATCCCCCTGCACAGAGGGAAGTGTATCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CCA 90 bp AGGGGCTTGCTAGGTTTCCCATCAAAGCACAAACCATGCTCCTGGTATGGGAAGTGTGGTCAGGGTGTGTaGCTTTCTAGGCCATGGCCT +
Preference number: 2 (lower is better)
Translates to: RGLLGFPSKHKPCSWYGKCGQGV*LSRPWP
Trigger: AGGCCATGGCCTAGAAAGCCACACACCCTGACCACA...CTTCCCATACCAGGAGCATGGTTTGTGCTTTGATGGGAAACCTAGCAAGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CCA 90 bp TATGTGCAGCATCTAAGACCAGACACCAGTCTCAGAGAGCCTCCCGAGGTAGCATTTATATGGCAGTGGTaGTGGGAAGGGGAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: YVQHLRPDTSLREPPEVAFIWQW*WEGEQR
Trigger: CCTCTGCTCCCCTTCCCACCACCACTGCCATATAAA...TGCTACCTCGGGAGGCTCTCTGAGACTGGTGTCTGGTCTTAGATGCTGCACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CCA 90 bp GTACTTAAGAAAGGCTGCACCTGCAATACCTGTACCTATGGCTGCCATATCATCGTGGTGGGAGGGCCATaGCAAGGCCACACAGCTGCA +
Preference number: 2 (lower is better)
Translates to: VLKKGCTCNTCTYGCHIIVVGGP*QGHTAA
Trigger: TGCAGCTGTGTGGCCTTGCCATGGCCCTCCCACCAC...GATGATATGGCAGCCATAGGTACAGGTATTGCAGGTGCAGCCTTTCTTAAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CCA 90 bp GGACAACCTGGTGGGATCCTTTTGCTCATCCTGGGTCTAAGGTCCTGGACTCCACAATACCTGTACCTATaGCTGCCATATCATCGGGCC +
Preference number: 2 (lower is better)
Translates to: GQPGGILLLILGLRSWTPQYLYL*LPYHRA
Trigger: GGCCCGATGATATGGCAGCCATAGGTACAGGTATTG...TGGAGTCCAGGACCTTAGACCCAGGATGAGCAAAAGGATCCCACCAGGTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CAA 90 bp AATGCCCACATTTTGTGTTCGACATCTGACCAGATGGGAGAAACCTaGGGAACCCTGGGTGGCAGCGTTCAAACCCTGGGTGAACTCTCA +
Preference number: 2 (lower is better)
Translates to: NAHILCSTSDQMGET*GTLGGSVQTLGELS
Trigger: TGAGAGTTCACCCAGGGTTTGAACGCTGCCACCCAGGGTTCCCAAGGTTTCTCCCATCTGGTCAGATGTCGAACACAAAATGTGGGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR TCA 90 bp CTTCTGCTCTGGGTTTTTAGCACCAGCTCTGAATGCCAAGACCACCCCCAAGTTTCCTGCAAAATCCCATaGTGGACGACTGGCTCTCTG +
Preference number: 2 (lower is better)
Translates to: LLLWVFSTSSECQDHPQVSCKIP*WTTGSL
Trigger: CAGAGAGCCAGTCGTCCATCATGGGATTTTGCAGGA...AACTTGGGGGTGGTCTTGGCATTCAGAGCTGGTGCTAAAAACCCAGAGCAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR GCA 90 bp GATGGACATGGAAACCAGGTGAGGCTTTGGATGGAAAGCTGGTCTGGGCCAAGGAGAACGTTCTCCTCTTaGTGCAAAGAGCCCCAGAAT +
Preference number: 2 (lower is better)
Translates to: DGHGNQVRLWMESWSGPRRTFSS*CKEPQN
Trigger: ATTCTGGGGCTCTTTGCAGCAAGAGGAGAACGTTCT...CCTTGGCCCAGACCAGCTTTCCATCCAAAGCCTCACCTGGTTTCCATGTCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR GCA 90 bp GGATACACCAGCCTCCTGCCAGGTTCTGGAAGCTCACCTTATAATCTACCAGGAACCTGTACCTATGGCTaGCATATCATCGGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: GYTSLLPGSGSSPYNLPGTCTYG*HIIGPE
Trigger: CTCTGGCCCGATGATATGGCAGCCATAGGTACAGGT...TCCTGGTAGATTATAAGGTGAGCTTCCAGAACCTGGCAGGAGGCTGGTGTATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CCA 90 bp TCAGACACAGGTCTGAAGAACTCTGGGGTCACCCTGGCAATGGTCCTGGACAACGTATCCCAGAGCTTATaGGTGGGAAGCCAAACAATG +
Preference number: 2 (lower is better)
Translates to: SDTGLKNSGVTLAMVLDNVSQSL*VGSQTM
Trigger: CATTGTTTGGCTTCCCACCCATAAGCTCTGGGATAC...GTTGTCCAGGACCATTGCCAGGGTGACCCCAGAGTTCTTCAGACCTGTGTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CCA 90 bp GATAAAAGACCTTGTGGTCCCAACTTCCTTATGTGGACAGAGAAGATAGGTCCTGGGTCACCCTGGCAATaGTCCTGGACAACCTGGTGG +
Preference number: 2 (lower is better)
Translates to: DKRPCGPNFLMWTEKIGPGSPWQ*SWTTWW
Trigger: CCACCAGGTTGTCCAGGACCATTGCCAGGGTGACCC...AGGACCTATCTTCTCTGTCCACATAAGGAAGTTGGGACCACAAGGTCTTTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CAA 90 bp AGCAAGAGAAGCCTGATCTTTCCTTCCGTGCAGAATGCCCACATTTaGTGTTCGACATCTGACCAGATGGGAGAAACCTTGGGAACCCTG +
Preference number: 2 (lower is better)
Translates to: SKRSLIFPSVQNAHI*CSTSDQMGETLGTL
Trigger: CAGGGTTCCCAAGGTTTCTCCCATCTGGTCAGATGTCGAACACAAAATGTGGGCATTCTGCACGGAAGGAAAGATCAGGCTTCTCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CAA 90 bp GGTATGGGAAGCTCAGATGAAGTGGCTTGCTCCCAGGATGTGTGTTaGGGGACTCTATCCCTATCCTCAGCTCTGGTGTTTTGTGTGATA +
Preference number: 2 (lower is better)
Translates to: GMGSSDEVACSQDVC*GTLSLSSALVFCVI
Trigger: TATCACACAAAACACCAGAGCTGAGGATAGGGATAGAGTCCCCAAACACACATCCTGGGAGCAAGCCACTTCATCTGAGCTTCCCATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR GCA 90 bp CATTCCCAGCCTTCTCCCAGGGAACCGGCCACCTTGTTCAAGAAAAAGAACGTTTCCTTCCGTGCAGAATaGCCACATTTTGTGTTCGAC +
Preference number: 2 (lower is better)
Translates to: HSQPSPREPATLFKKKNVSFRAE*PHFVFD
Trigger: GTCGAACACAAAATGTGGGCATTCTGCACGGAAGGA...AACGTTCTTTTTCTTGAACAAGGTGGCCGGTTCCCTGGGAGAAGGCTGGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR GCA 90 bp TCAGATACACTTCCCTCTGTGCAGGGGGATACACCAGCCTCCTGCCAGGTTCTGTTCCAATCTTGTACATaGTTCATTCTGGCTCTCACA +
Preference number: 2 (lower is better)
Translates to: SDTLPSVQGDTPASCQVLFQSCT*FILALT
Trigger: TGTGAGAGCCAGAATGAAGCATGTACAAGATTGGAA...CAGAACCTGGCAGGAGGCTGGTGTATCCCCCTGCACAGAGGGAAGTGTATCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR GCA 90 bp GGTCCCATGGCACTGTATTCAGTATCAGACACAGGTCTGAAGAACTCTGGGGTCGACCTAAAAGTGGGTTaGAGGAACCAGTTAAGGCTG +
Preference number: 2 (lower is better)
Translates to: GPMALYSVSDTGLKNSGVDLKVG*RNQLRL
Trigger: CAGCCTTAACTGGTTCCTGCAACCCACTTTTAGGTC...GACCCCAGAGTTCTTCAGACCTGTGTCTGATACTGAATACAGTGCCATGGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR GCA 90 bp TATGTGCAGCATCTAAGACCAGACACCAGTCTCAGAGAGCCTCCCGAGGTAGCAGTACTTAAGAAAGGCTaGACCTGCAATACCTGTACC +
Preference number: 2 (lower is better)
Translates to: YVQHLRPDTSLREPPEVAVLKKG*TCNTCT
Trigger: GGTACAGGTATTGCAGGTGCAGCCTTTCTTAAGTAC...TGCTACCTCGGGAGGCTCTCTGAGACTGGTGTCTGGTCTTAGATGCTGCACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CCA 90 bp GCCACCTTGTTCAAGAAAAAGAACGTTCTCCTCTTGCTGCAAAGAGCCCCAGAACGACTGGCTCTCTGCTaGTGCCTCATACAAGGAAGA +
Preference number: 2 (lower is better)
Translates to: ATLFKKKNVLLLLQRAPERLALC*CLIQGR
Trigger: TCTTCCTTGTATGAGGCACCAGCAGAGAGCCAGTCG...TTCTGGGGCTCTTTGCAGCAAGAGGAGAACGTTCTTTTTCTTGAACAAGGTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CCA 90 bp TGGATCCTGAAGCAGGAAAAAGCCCACCAGCATCAGCATAAAAGAAAGGCAGGCATTGTCCTGAGCTGGTaGCCCTGCAATTCACTGAGA +
Preference number: 2 (lower is better)
Translates to: WILKQEKAHQHQHKRKAGIVLSW*PCNSLR
Trigger: TCTCAGTGAATTGCAGGGCCACCAGCTCAGGACAAT...GCCTGCCTTTCTTTTATGCTGATGCTGGTGGGCTTTTTCCTGCTTCAGGATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CCA 90 bp TGGATCCTGAAGCAGGAAAAAGCCCACCAGCATCAGCATAAAAGAAAGGCAGGCTGGCTTTCTAGGCCATaGCCTGTCATCAAGCCAAAC +
Preference number: 2 (lower is better)
Translates to: WILKQEKAHQHQHKRKAGWLSRP*PVIKPN
Trigger: GTTTGGCTTGATGACAGGCCATGGCCTAGAAAGCCA...GCCTGCCTTTCTTTTATGCTGATGCTGGTGGGCTTTTTCCTGCTTCAGGATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR TCA 90 bp CATACATGTATGTCTTCCATATCAGCCACATACACAACATTCAGATACACTTCCGGTGCCCTACTGCAGTaGCTCCTACGAGGGAGGGGA +
Preference number: 2 (lower is better)
Translates to: HTCMSSISATYTTFRYTSGALLQ*LLRGRG
Trigger: TCCCCTCCCTCGTAGGAGTCACTGCAGTAGGGCACC...GGAAGTGTATCTGAATGTTGTGTATGTGGCTGATATGGAAGACATACATGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR TCA 90 bp GATAAAAGACCTTGTGGTCCCAACTTCCTTATGTGGACAGAGAAGATAGGTCCTCCCTTACATGGATCCTaGAGCAGGAAAAAGCCCACC +
Preference number: 2 (lower is better)
Translates to: DKRPCGPNFLMWTEKIGPPLHGS*SRKKPT
Trigger: GGTGGGCTTTTTCCTGCTTCAGGATCCATGTAAGGG...AGGACCTATCTTCTCTGTCCACATAAGGAAGTTGGGACCACAAGGTCTTTTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CCA 90 bp GATAAAAGACCTTGTGGTCCCAACTTCCTTATGTGGACAGAGAAGATAGGTCCTACCATGCTCCTGGTATaGGAAGCTCAGATGAAGTGG +
Preference number: 2 (lower is better)
Translates to: DKRPCGPNFLMWTEKIGPTMLLV*EAQMKW
Trigger: CCACTTCATCTGAGCTTCCCATACCAGGAGCATGGT...AGGACCTATCTTCTCTGTCCACATAAGGAAGTTGGGACCACAAGGTCTTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CCA 90 bp GATAAAAGACCTTGTGGTCCCAACTTCCTTATGTGGACAGAGAAGATAGGTCCTTGGAGCAGGGTCCCATaGCACTGTATTCAGTATCAG +
Preference number: 2 (lower is better)
Translates to: DKRPCGPNFLMWTEKIGPWSRVP*HCIQYQ
Trigger: CTGATACTGAATACAGTGCCATGGGACCCTGCTCCA...AGGACCTATCTTCTCTGTCCACATAAGGAAGTTGGGACCACAAGGTCTTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR GCA 90 bp GATAAAAGACCTTGTGGTCCCAACTTCCTTATGTGGACAGAGAAGATAGGTCCTTCACTCCCTTCTCCCTaGTTCTGCTCTGGGTTTTTA +
Preference number: 2 (lower is better)
Translates to: DKRPCGPNFLMWTEKIGPSLPSP*FCSGFL
Trigger: TAAAAACCCAGAGCAGAAGCAGGGAGAAGGGAGTGA...AGGACCTATCTTCTCTGTCCACATAAGGAAGTTGGGACCACAAGGTCTTTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CCA 90 bp CATACATGTATGTCTTCCATATCAGCCACATACACAACATTCAGATACACTTCCGCAGCGTTCAAACCCTaGGTGAACTCTCAAGGTCTC +
Preference number: 2 (lower is better)
Translates to: HTCMSSISATYTTFRYTSAAFKP*VNSQGL
Trigger: GAGACCTTGAGAGTTCACCCAGGGTTTGAACGCTGC...GGAAGTGTATCTGAATGTTGTGTATGTGGCTGATATGGAAGACATACATGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CAA 90 bp CCTCCTCCGAACTGGAGCCAATCTTCTTCTTTAAACGCTGATGGATaGCATACATGTATGTCTTCCATATCAGCCACATACACAACATTC +
Preference number: 2 (lower is better)
Translates to: PPPNWSQSSSLNADG*HTCMSSISATYTTF
Trigger: GAATGTTGTGTATGTGGCTGATATGGAAGACATACATGTATGCAATCCATCAGCGTTTAAAGAAGAAGATTGGCTCCAGTTCGGAGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CCA 90 bp CATACATGTATGTCTTCCATATCAGCCACATACACAACATTCAGATACACTTCCTACCCCAAACCATTCTaGGAACACTCAAAGGACCCC +
Preference number: 2 (lower is better)
Translates to: HTCMSSISATYTTFRYTSYPKPF*EHSKDP
Trigger: GGGGTCCTTTGAGTGTTCCCAGAATGGTTTGGGGTA...GGAAGTGTATCTGAATGTTGTGTATGTGGCTGATATGGAAGACATACATGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR GCA 72 bp GGAGGAGGATGCCGCACCGCCTGCCCTGGCCGGACGTaGCATTCCCAGCCTTCTCCCAGGGAACCGGCCACC +
Preference number: 3 (lower is better)
Translates to: GGGCRTACPGRT*HSQPSPREPAT
Trigger: GGTGGCCGGTTCCCTGGGAGAAGGCTGGGAATGGCACGTCCGGCCAGGGCAGGCGGTGCGGCATCCTCCTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 72 bp AGGAATCCCAGGAGGAGGATGCCGCACCGCCTGCCCTaGCCGGACGTGCCATTCCCAGCCTTCTCCCAGGGA +
Preference number: 3 (lower is better)
Translates to: RNPRRRMPHRLP*PDVPFPAFSQG
Trigger: TCCCTGGGAGAAGGCTGGGAATGGCACGTCCGGCCAGGGCAGGCGGTGCGGCATCCTCCTCCTGGGATTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CAA 90 bp CCCGAGGTAGCAGCAACATCCCTGCAGCAGGGGGACGGGCAGGTTGTAGGCAGTAAGGGCACAGCGGAGTaGAGGCCAGGGCCAGTGTGC +
Preference number: 3 (lower is better)
Translates to: PEVAATSLQQGDGQVVGSKGTAE*RPGPVC
Trigger: GCACACTGGCCCTGGCCTCAACTCCGCTGTGCCCTT...ACTGCCTACAACCTGCCCGTCCCCCTGCTGCAGGGATGTTGCTGCTACCTCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR TCA 72 bp CCAAACACATCATTCCTCATCCAGCCTTCCTCCCGCTaGGGCCAGGGGCATCGGACCCATCAAGGAGGAGAG +
Preference number: 3 (lower is better)
Translates to: PNTSFLIQPSSR*GQGHRTHQGGE
Trigger: CTCTCCTCCTTGATGGGTCCGATGCCCCTGGCCTCAGCGGGAGGAAGGCTGGATGAGGAATGATGTGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR TCA 72 bp GATGGAAAGCTGGTCTGGGCCAAGGCCTCTGCAGGATaGGTAGTAGCTGTTCCTGCTGGGCTTTGGGCAGCC +
Preference number: 3 (lower is better)
Translates to: DGKLVWAKASAG*VVAVPAGLWAA
Trigger: GGCTGCCCAAAGCCCAGCAGGAACAGCTACTACTCATCCTGCAGAGGCCTTGGCCCAGACCAGCTTTCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR TCA 72 bp GCTCCCAGAGAAGCTGGACTCACTGTGCGGGATTACTaGGGGTGTGGCTGCCAGGCTACAGTCACAGGAAGG +
Preference number: 3 (lower is better)
Translates to: APREAGLTVRDY*GCGCQATVTGR
Trigger: CCTTCCTGTGACTGTAGCCTGGCAGCCACACCCTCAGTAATCCCGCACAGTGAGTCCAGCTTCTCTGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR TCA 72 bp CTTGGGAACCCTGGGTGGCAGCGTTCAAACCCTGGGTaGACTCTCAAGGTCTCAGGCCTGGTAAGCATCTCC +
Preference number: 3 (lower is better)
Translates to: LGNPGWQRSNPG*TLKVSGLVSIS
Trigger: GGAGATGCTTACCAGGCCTGAGACCTTGAGAGTTCACCCAGGGTTTGAACGCTGCCACCCAGGGTTCCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR GCA 72 bp AATGTACACGTAAGCCCTGCTCACTCTACCAGGGCCTaGAGGTGCCCTACTGCAGTGACTCCTACGAGGGAG +
Preference number: 3 (lower is better)
Translates to: NVHVSPAHSTRA*RCPTAVTPTRE
Trigger: CTCCCTCGTAGGAGTCACTGCAGTAGGGCACCTGCAGGCCCTGGTAGAGTGAGCAGGGCTTACGTGTACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR GCA 72 bp AAGAAAGGCTGCACCTGCAATACCTGTACCTATGGCTaGCATATCATCGGGCCAGAGCCGCCCTGGGCTCCA +
Preference number: 3 (lower is better)
Translates to: KKGCTCNTCTYG*HIIGPEPPWAP
Trigger: TGGAGCCCAGGGCGGCTCTGGCCCGATGATATGGCAGCCATAGGTACAGGTATTGCAGGTGCAGCCTTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 72 bp CTGGGGTCACCCTGGCAATGGTCCTGGACAACCTGGTaGGATCCTTTTGCTCATCCTGGGTCTAAGGTCCTG +
Preference number: 3 (lower is better)
Translates to: LGSPWQWSWTTW*DPFAHPGSKVL
Trigger: CAGGACCTTAGACCCAGGATGAGCAAAAGGATCCCACCAGGTTGTCCAGGACCATTGCCAGGGTGACCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 72 bp AGAAGCTGGACTCACTGTGCGGGATTACTGAGGGTGTaGCTGCCAGGCTACAGTCACAGGAAGGCCAGACTG +
Preference number: 3 (lower is better)
Translates to: RSWTHCAGLLRV*LPGYSHRKARL
Trigger: CAGTCTGGCCTTCCTGTGACTGTAGCCTGGCAGCCACACCCTCAGTAATCCCGCACAGTGAGTCCAGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR GCA 72 bp CCCACAAAACCAAATCAGAGTGTGCTAGGCCGCATCTaGTGGGGCCTGGCTCTCCCTGTCTTCACACACTCA +
Preference number: 3 (lower is better)
Translates to: PTKPNQSVLGRI*WGLALPVFTHS
Trigger: TGAGTGTGTGAAGACAGGGAGAGCCAGGCCCCAGCAGATGCGGCCTAGCACACTCTGATTTGGTTTTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR GCA 72 bp GGCTTTGGATGGAAAGCTGGTCTGGGCCAAGGCCTCTaGAGGATGAGTAGTAGCTGTTCCTGCTGGGCTTTG +
Preference number: 3 (lower is better)
Translates to: GFGWKAGLGQGL*RMSSSCSCWAL
Trigger: CAAAGCCCAGCAGGAACAGCTACTACTCATCCTGCAGAGGCCTTGGCCCAGACCAGCTTTCCATCCAAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 72 bp ACTCTGGGGTCACCCTGGCAATGGTCCTGGACAACCTaGTGGGATCCTTTTGCTCATCCTGGGTCTAAGGTC +
Preference number: 3 (lower is better)
Translates to: TLGSPWQWSWTT*WDPFAHPGSKV
Trigger: GACCTTAGACCCAGGATGAGCAAAAGGATCCCACCAGGTTGTCCAGGACCATTGCCAGGGTGACCCCAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 72 bp GCAGCAGGGGGACGGGCAGGTTGTAGGCAGTTAGATTaGAGCAGGGTCCCATGGCACTGTATTCAGTATCAG +
Preference number: 3 (lower is better)
Translates to: AAGGRAGCRQLD*SRVPWHCIQYQ
Trigger: CTGATACTGAATACAGTGCCATGGGACCCTGCTCCAATCTAACTGCCTACAACCTGCCCGTCCCCCTGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CAA 90 bp AGGGGCTTGCTAGGTTTCCCATCAAAGCACAAACCATGCTCCTGGTATGGGAAGCAGATGGGAGAAACCTaGGGAACCCTGGGTGGCAGC +
Preference number: 3 (lower is better)
Translates to: RGLLGFPSKHKPCSWYGKQMGET*GTLGGS
Trigger: GCTGCCACCCAGGGTTCCCAAGGTTTCTCCCATCTG...CTTCCCATACCAGGAGCATGGTTTGTGCTTTGATGGGAAACCTAGCAAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR TCA 72 bp ATGCTTCATTCTGGCTCTCACAGCAGGCCCAGGCCCTaGAACGGCATTATTTTAGGCTGCAAGGTGGCCCCT +
Preference number: 3 (lower is better)
Translates to: MLHSGSHSRPRP*NGIILGCKVAP
Trigger: AGGGGCCACCTTGCAGCCTAAAATAATGCCGTTTCAGGGCCTGGGCCTGCTGTGAGAGCCAGAATGAAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR TCA 72 bp GGCTGCCAGGCTACAGTCACAGGAAGGCCAGACTGTTaGGATGGACATGGAAACCAGGTGAGGCTTTGGATG +
Preference number: 3 (lower is better)
Translates to: GCQATVTGRPDC*DGHGNQVRLWM
Trigger: CATCCAAAGCCTCACCTGGTTTCCATGTCCATCTCAACAGTCTGGCCTTCCTGTGACTGTAGCCTGGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 72 bp CCTGCAAAATCCCATGATGGACGACTGGCTCTCTGCTaGTGCCTCATACAAGGAAGACAAAGGGCACAGCGG +
Preference number: 3 (lower is better)
Translates to: PAKSHDGRLALC*CLIQGRQRAQR
Trigger: CCGCTGTGCCCTTTGTCTTCCTTGTATGAGGCACCAGCAGAGAGCCAGTCGTCCATCATGGGATTTTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 72 bp AAACCTTGGGAACCCTGGGTGGCAGCGTTCAAACCCTaGGTGAACTCTCAAGGTCTCAGGCCTGGTAAGCAT +
Preference number: 3 (lower is better)
Translates to: KPWEPWVAAFKP*VNSQGLRPGKH
Trigger: ATGCTTACCAGGCCTGAGACCTTGAGAGTTCACCCAGGGTTTGAACGCTGCCACCCAGGGTTCCCAAGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CAA 90 bp TATGTGCAGCATCTAAGACCAGACACCAGTCTCAGAGAGCCTCCCGAGGTAGCACCTGGTGGGATCCTTTaGCTCATCCTGGGTCTAAGG +
Preference number: 3 (lower is better)
Translates to: YVQHLRPDTSLREPPEVAPGGIL*LILGLR
Trigger: CCTTAGACCCAGGATGAGCAAAAGGATCCCACCAGG...TGCTACCTCGGGAGGCTCTCTGAGACTGGTGTCTGGTCTTAGATGCTGCACATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR TCA 72 bp ACGAGGGAGGGGAGACAGTTTGTGGTGAGCACGTGGTaGAACCTGGCTTTCTGGGAGAAGGAAGACAATGGA +
Preference number: 3 (lower is better)
Translates to: TREGRQFVVSTW*NLAFWEKEDNG
Trigger: TCCATTGTCTTCCTTCTCCCAGAAAGCCAGGTTTCACCACGTGCTCACCACAAACTGTCTCCCCTCCCTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR TCA 72 bp GTCCCATGGCACTGTATTCAGTATCAGACACAGGTCTaGAGAACTCTGGGGTCACCCTGGCAATGGTCCTGG +
Preference number: 3 (lower is better)
Translates to: VPWHCIQYQTQV*RTLGSPWQWSW
Trigger: CCAGGACCATTGCCAGGGTGACCCCAGAGTTCTTCAGACCTGTGTCTGATACTGAATACAGTGCCATGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR GCA 72 bp ACACTTCCCTCTGTGCAGGGGGATACACCAGCCTCCTaGCAGGTTCTGGAAGCTCACCTTATAATCTACCAG +
Preference number: 3 (lower is better)
Translates to: TLPSVQGDTPAS*QVLEAHLIIYQ
Trigger: CTGGTAGATTATAAGGTGAGCTTCCAGAACCTGGCAGGAGGCTGGTGTATCCCCCTGCACAGAGGGAAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR GCA 72 bp AGCCACATACACAACATTCAGATACACTTCCCTCTGTaGAGGGGGATACACCAGCCTCCTGCCAGGTTCTGG +
Preference number: 3 (lower is better)
Translates to: SHIHNIQIHFPL*RGIHQPPARFW
Trigger: CCAGAACCTGGCAGGAGGCTGGTGTATCCCCCTGCACAGAGGGAAGTGTATCTGAATGTTGTGTATGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 72 bp TTTTGTGTTCGACATCTGACCAGATGGGAGAAACCTTaGGAACCCTGGGTGGCAGCGTTCAAACCCTGGGTG +
Preference number: 3 (lower is better)
Translates to: FCVRHLTRWEKP*EPWVAAFKPWV
Trigger: CACCCAGGGTTTGAACGCTGCCACCCAGGGTTCCCAAGGTTTCTCCCATCTGGTCAGATGTCGAACACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 72 bp AGGTCCTTTACTCCTCCTCATTACCCTGCCCTCTCATaGACTGGGCTAACTGAAGGCCAAGCTCCCAGAGAA +
Preference number: 3 (lower is better)
Translates to: RSFTPPHYPALS*TGLTEGQAPRE
Trigger: TTCTCTGGGAGCTTGGCCTTCAGTTAGCCCAGTCCATGAGAGGGCAGGGTAATGAGGAGGAGTAAAGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR TCA 72 bp AAGCACAAACCATGCTCCTGGTATGGGAAGCTCAGATaGAGTGGCTTGCTCCCAGGATGTGTGTTTGGGGAC +
Preference number: 3 (lower is better)
Translates to: KHKPCSWYGKLR*SGLLPGCVFGD
Trigger: GTCCCCAAACACACATCCTGGGAGCAAGCCACTTCATCTGAGCTTCCCATACCAGGAGCATGGTTTGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR GCA 72 bp AGTCCTGCAAAATCCCATGATGGACGACTGGCTCTCTaGTGGTGCCTCATACAAGGAAGACAAAGGGCACAG +
Preference number: 3 (lower is better)
Translates to: SPAKSHDGRLAL*WCLIQGRQRAQ
Trigger: CTGTGCCCTTTGTCTTCCTTGTATGAGGCACCAGCAGAGAGCCAGTCGTCCATCATGGGATTTTGCAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CAA 90 bp AGGGGCTTGCTAGGTTTCCCATCAAAGCACAAACCATGCTCCTGGTATGGGAAGTCCCAGGATGTGTGTTaGGGGACTCTATCCCTATCC +
Preference number: 3 (lower is better)
Translates to: RGLLGFPSKHKPCSWYGKSQDVC*GTLSLS
Trigger: GGATAGGGATAGAGTCCCCAAACACACATCCTGGGA...CTTCCCATACCAGGAGCATGGTTTGTGCTTTGATGGGAAACCTAGCAAGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR TCA 72 bp GAACTACTCAAGGACTTCCAGTCCTGCAAAATCCCATaGTGGACGACTGGCTCTCTGCTGGTGCCTCATACA +
Preference number: 3 (lower is better)
Translates to: ELLKDFQSCKIP*WTTGSLLVPHT
Trigger: TGTATGAGGCACCAGCAGAGAGCCAGTCGTCCATCATGGGATTTTGCAGGACTGGAAGTCCTTGAGTAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 72 bp GGACTTCCAGTCCTGCAAAATCCCATGATGGACGACTaGCTCTCTGCTGGTGCCTCATACAAGGAAGACAAA +
Preference number: 3 (lower is better)
Translates to: GLPVLQNPMMDD*LSAGASYKEDK
Trigger: TTTGTCTTCCTTGTATGAGGCACCAGCAGAGAGCCAGTCGTCCATCATGGGATTTTGCAGGACTGGAAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 72 bp CTGCAATTCACTGAGAAGACAGGACAAGCTCAAGAGTaGAAGAGCTCTAATGTCCAAGGGCTGCAGCCCACT +
Preference number: 3 (lower is better)
Translates to: LQFTEKTGQAQE*KSSNVQGLQPT
Trigger: AGTGGGCTGCAGCCCTTGGACATTAGAGCTCTTCCACTCTTGAGCTTGTCCTGTCTTCTCAGTGAATTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 72 bp GCTCAGATGAAGTGGCTTGCTCCCAGGATGTGTGTTTaGGGACTCTATCCCTATCCTCAGCTCTGGTGTTTT +
Preference number: 3 (lower is better)
Translates to: AQMKWLAPRMCV*GLYPYPQLWCF
Trigger: AAAACACCAGAGCTGAGGATAGGGATAGAGTCCCCAAACACACATCCTGGGAGCAAGCCACTTCATCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 72 bp CAAACCATGCTCCTGGTATGGGAAGCTCAGATGAAGTaGCTTGCTCCCAGGATGTGTGTTTGGGGACTCTAT +
Preference number: 3 (lower is better)
Translates to: QTMLLVWEAQMK*LAPRMCVWGLY
Trigger: ATAGAGTCCCCAAACACACATCCTGGGAGCAAGCCACTTCATCTGAGCTTCCCATACCAGGAGCATGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 72 bp AGGTTTCCCATCAAAGCACAAACCATGCTCCTGGTATaGGAAGCTCAGATGAAGTGGCTTGCTCCCAGGATG +
Preference number: 3 (lower is better)
Translates to: RFPIKAQTMLLV*EAQMKWLAPRM
Trigger: CATCCTGGGAGCAAGCCACTTCATCTGAGCTTCCCATACCAGGAGCATGGTTTGTGCTTTGATGGGAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 72 bp ACTGTATTCAGTATCAGACACAGGTCTGAAGAACTCTaGGGTCACCCTGGCAATGGTCCTGGACAACCTGGT +
Preference number: 3 (lower is better)
Translates to: TVFSIRHRSEEL*GHPGNGPGQPG
Trigger: ACCAGGTTGTCCAGGACCATTGCCAGGGTGACCCCAGAGTTCTTCAGACCTGTGTCTGATACTGAATACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 72 bp TACAGTCACAGGAAGGCCAGACTGTTGAGATGGACATaGAAACCAGGTGAGGCTTTGGATGGAAAGCTGGTC +
Preference number: 3 (lower is better)
Translates to: YSHRKARLLRWT*KPGEALDGKLV
Trigger: GACCAGCTTTCCATCCAAAGCCTCACCTGGTTTCCATGTCCATCTCAACAGTCTGGCCTTCCTGTGACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CAA 90 bp CTTCTGCTCTGGGTTTTTAGCACCAGCTCTGAATGCCAAGACCACCCCCAAGTTCAGAATGCCCACATTTaGTGTTCGACATCTGACCAG +
Preference number: 3 (lower is better)
Translates to: LLLWVFSTSSECQDHPQVQNAHI*CSTSDQ
Trigger: CTGGTCAGATGTCGAACACAAAATGTGGGCATTCTG...AACTTGGGGGTGGTCTTGGCATTCAGAGCTGGTGCTAAAAACCCAGAGCAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR TCA 72 bp CCTAAAAGTGGGTTGCAGGAACCAGTTAAGGCTGGATaGACCTGGTCAGTCCCTTACATGGATCCTGAAGCA +
Preference number: 3 (lower is better)
Translates to: PKSGLQEPVKAG*TWSVPYMDPEA
Trigger: TGCTTCAGGATCCATGTAAGGGACTGACCAGGTTCATCCAGCCTTAACTGGTTCCTGCAACCCACTTTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR GCA 72 bp AAGCTCAAGAGTGGAAGAGCTCTAATGTCCAAGGGCTaGAGCCCACTCAGAGGAGGTTACAGAAAATTAGGC +
Preference number: 3 (lower is better)
Translates to: KLKSGRALMSKG*SPLRGGYRKLG
Trigger: GCCTAATTTTCTGTAACCTCCTCTGAGTGGGCTGCAGCCCTTGGACATTAGAGCTCTTCCACTCTTGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR TCA 72 bp GGACTCTATCCCTATCCTCAGCTCTGGTGTTTTGTGTaGTACCCCAAACCATTCTGGGAACACTCAAAGGAC +
Preference number: 3 (lower is better)
Translates to: GLYPYPQLWCFV*YPKPFWEHSKD
Trigger: GTCCTTTGAGTGTTCCCAGAATGGTTTGGGGTATCACACAAAACACCAGAGCTGAGGATAGGGATAGAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR GCA 72 bp ATTCCTGTAAGATCCATTGTCCTGAGCTGGTGGCCCTaGAATTCACTGAGAAGACAGGACAAGCTCAAGAGT +
Preference number: 3 (lower is better)
Translates to: IPVRSIVLSWWP*NSLRRQDKLKS
Trigger: ACTCTTGAGCTTGTCCTGTCTTCTCAGTGAATTGCAGGGCCACCAGCTCAGGACAATGGATCTTACAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CAA 90 bp AGGGGCTTGCTAGGTTTCCCATCAAAGCACAAACCATGCTCCTGGTATGGGAAGTCTCACATTCCAATCTaGTACATGCTTCATTCTGGC +
Preference number: 3 (lower is better)
Translates to: RGLLGFPSKHKPCSWYGKSHIPI*YMLHSG
Trigger: GCCAGAATGAAGCATGTACAAGATTGGAATGTGAGA...CTTCCCATACCAGGAGCATGGTTTGTGCTTTGATGGGAAACCTAGCAAGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CAA 90 bp GTACTTAAGAAAGGCTGCACCTGCAATACCTGTACCTATGGCTGCCATATCATCAAGAACGTTCTCCTCTaGCTGCAAAGAGCCCCAGAA +
Preference number: 3 (lower is better)
Translates to: VLKKGCTCNTCTYGCHIIKNVLL*LQRAPE
Trigger: TTCTGGGGCTCTTTGCAGCAAGAGGAGAACGTTCTT...GATGATATGGCAGCCATAGGTACAGGTATTGCAGGTGCAGCCTTTCTTAAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 72 bp GCAAAAAGAATTCCTGTAAGATCCATTGTCCTGAGCTaGTGGCCCTGCAATTCACTGAGAAGACAGGACAAG +
Preference number: 3 (lower is better)
Translates to: AKRIPVRSIVLS*WPCNSLRRQDK
Trigger: CTTGTCCTGTCTTCTCAGTGAATTGCAGGGCCACCAGCTCAGGACAATGGATCTTACAGGAATTCTTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CCA 72 bp GGAGATAAAAGACCTTGTGGTCCCAACTTCCTTATGTaGACAGAGAAGATAGGTCCTTTACTCCTCCTCATT +
Preference number: 3 (lower is better)
Translates to: GDKRPCGPNFLM*TEKIGPLLLLI
Trigger: AATGAGGAGGAGTAAAGGACCTATCTTCTCTGTCCACATAAGGAAGTTGGGACCACAAGGTCTTTTATCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR TCA 72 bp TCCTCCGAACTGGAGCCAATCTTCTTCTTTAAACGCTaGTGGATTGCATACATGTATGTCTTCCATATCAGC +
Preference number: 3 (lower is better)
Translates to: SSELEPIFFFKR*WIAYMYVFHIS
Trigger: GCTGATATGGAAGACATACATGTATGCAATCCATCAGCGTTTAAAGAAGAAGATTGGCTCCAGTTCGGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR-3UTR CAA 90 bp CATACATGTATGTCTTCCATATCAGCCACATACACAACATTCAGATACACTTCCCTCAGCTCTGGTGTTTaGTGTGATACCCCAAACCAT +
Preference number: 3 (lower is better)
Translates to: HTCMSSISATYTTFRYTSLSSGV*CDTPNH
Trigger: ATGGTTTGGGGTATCACACAAAACACCAGAGCTGAG...GGAAGTGTATCTGAATGTTGTGTATGTGGCTGATATGGAAGACATACATGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp CCCGAGGTAGCAGCAACATCCCTGCAGCAGGGGGACGGGCAGGTTGTAGGCAGTCGGGGGCCACGGGCTTaGACAAGTGGGGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: PEVAATSLQQGDGQVVGSRGPRA*TSGGRS
Trigger: GCTCCTTCCCCCACTTGTCCAAGCCCGTGGCCCCCG...ACTGCCTACAACCTGCCCGTCCCCCTGCTGCAGGGATGTTGCTGCTACCTCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp TGTACCTATGGCTGCCATATCATCGGGCCAGAGCCGCCCTGGGCTCCAGGAGAGCTGGGCCTGCCCAGGTaGTGGCTCTGTCCCATACTC +
Preference number: 4 (lower is better)
Translates to: CTYGCHIIGPEPPWAPGELGLPR*WLCPIL
Trigger: GAGTATGGGACAGAGCCATCACCTGGGCAGGCCCAG...CTCTCCTGGAGCCCAGGGCGGCTCTGGCCCGATGATATGGCAGCCATAGGTACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp AGGCCGCATCTGCTGGGGCCTGGCTCTCCCTGTCTTCACACACTCAGCAAGAGATCAGCATGTCCTGGGTaGTCTTCAGGGCCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: RPHLLGPGSPCLHTLSKRSACPG*SSGPEG
Trigger: CCCCTCGGGCCCTGAAGACCACCCAGGACATGCTGA...TCTCTTGCTGAGTGTGTGAAGACAGGGAGAGCCAGGCCCCAGCAGATGCGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp TCAGACACAGGTCTGAAGAACTCTGGGGTCACCCTGGCAATGGTCCTGGACAACCCGCACCGCCTGCCCTaGCCGGACGTGCCATTCCCA +
Preference number: 4 (lower is better)
Translates to: SDTGLKNSGVTLAMVLDNPHRLP*PDVPFP
Trigger: TGGGAATGGCACGTCCGGCCAGGGCAGGCGGTGCGG...GTTGTCCAGGACCATTGCCAGGGTGACCCCAGAGTTCTTCAGACCTGTGTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp CCTATGGCTGCCATATCATCGGGCCAGAGCCGCCCTGGGCTCCAGGAGAGGAGAACTCTGGGGTCACCCTaGCAATGGTCCTGGACAACC +
Preference number: 4 (lower is better)
Translates to: PMAAISSGQSRPGLQERRTLGSP*QWSWTT
Trigger: GGTTGTCCAGGACCATTGCCAGGGTGACCCCAGAGT...TCTCCTCTCCTGGAGCCCAGGGCGGCTCTGGCCCGATGATATGGCAGCCATAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp TGTGCTAGGCCGCATCTGCTGGGGCCTGGCTCTCCCTGTCTTCACACACTCAGCGGAGAAGCCCCAGAGTaGAGGGGCTTGCTAGGTTTC +
Preference number: 4 (lower is better)
Translates to: CARPHLLGPGSPCLHTLSGEAPE*RGLLGF
Trigger: GAAACCTAGCAAGCCCCTGCACTCTGGGGCTTCTCC...GCTGAGTGTGTGAAGACAGGGAGAGCCAGGCCCCAGCAGATGCGGCCTAGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp TGTGCTAGGCCGCATCTGCTGGGGCCTGGCTCTCCCTGTCTTCACACACTCAGCAGTAGTAGCTGTTCCTaGTGGGCTTTGGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: CARPHLLGPGSPCLHTLSSSSCS*WALGSP
Trigger: GGGGCTGCCCAAAGCCCAGCAGGAACAGCTACTACT...GCTGAGTGTGTGAAGACAGGGAGAGCCAGGCCCCAGCAGATGCGGCCTAGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp GATGGACATGGAAACCAGGTGAGGCTTTGGATGGAAAGCTGGTCTGGGCCAAGGGCTGGGACGTCAGGCTaGGCAGTGGGAGCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: DGHGNQVRLWMESWSGPRAGTSG*AVGAES
Trigger: GGACTCCGCTCCCACTGCCCAGCCTGACGTCCCAGC...CCTTGGCCCAGACCAGCTTTCCATCCAAAGCCTCACCTGGTTTCCATGTCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp CCAGGGGCAGAGCAAACATGGCAACCAGGGGCCTGCACTGTCCTGGGACCAAGAGACTCCAGCAGCAGCTaGGCTATAGAGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PGAEQTWQPGACTVLGPRDSSSS*AIEWRQ
Trigger: CTGCCTCCACTCTATAGCCCAGCTGCTGCTGGAGTC...TCTTGGTCCCAGGACAGTGCAGGCCCCTGGTTGCCATGTTTGCTCTGCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp GGATACACCAGCCTCCTGCCAGGTTCTGGAAGCTCACCTTATAATCTACCAGGACAGCCTTCCTCCCGCTaGGGCCAGGGGCATCGGACC +
Preference number: 4 (lower is better)
Translates to: GYTSLLPGSGSSPYNLPGQPSSR*GQGHRT
Trigger: GGTCCGATGCCCCTGGCCTCAGCGGGAGGAAGGCTG...TCCTGGTAGATTATAAGGTGAGCTTCCAGAACCTGGCAGGAGGCTGGTGTATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp TTGGGAACCCTGGGTGGCAGCGTTCAAACCCTGGGTGAACTCTCAAGGTCTCAGGGTGCCCTACTGCAGTaGCTCCTACGAGGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LGTLGGSVQTLGELSRSQGALLQ*LLRGRG
Trigger: TCCCCTCCCTCGTAGGAGTCACTGCAGTAGGGCACC...CTGAGACCTTGAGAGTTCACCCAGGGTTTGAACGCTGCCACCCAGGGTTCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp CCCGAGGTAGCAGCAACATCCCTGCAGCAGGGGGACGGGCAGGTTGTAGGCAGTGGCCAGCTGTGCTCCTaGAGTCTTGTTGATCTCTGT +
Preference number: 4 (lower is better)
Translates to: PEVAATSLQQGDGQVVGSGQLCS*SLVDLC
Trigger: ACAGAGATCAACAAGACTGCAGGAGCACAGCTGGCC...ACTGCCTACAACCTGCCCGTCCCCCTGCTGCAGGGATGTTGCTGCTACCTCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp TGTACCTATGGCTGCCATATCATCGGGCCAGAGCCGCCCTGGGCTCCAGGAGAGGCTGGCCTGGAGCTTTaGAGTGAGGGCTGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: CTYGCHIIGPEPPWAPGEAGLEL*SEGCVQ
Trigger: TTGAACACAGCCCTCACTCCAAAGCTCCAGGCCAGC...CTCTCCTGGAGCCCAGGGCGGCTCTGGCCCGATGATATGGCAGCCATAGGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp CCTATGGCTGCCATATCATCGGGCCAGAGCCGCCCTGGGCTCCAGGAGAGGAGATTCGCTTTCTGGTTATaGGAGGTGGAGGATCCAGCC +
Preference number: 4 (lower is better)
Translates to: PMAAISSGQSRPGLQERRFAFWL*EVEDPA
Trigger: GGCTGGATCCTCCACCTCCCATAACCAGAAAGCGAA...TCTCCTCTCCTGGAGCCCAGGGCGGCTCTGGCCCGATGATATGGCAGCCATAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp AGGCCGCATCTGCTGGGGCCTGGCTCTCCCTGTCTTCACACACTCAGCAAGAGAGGCCAGTGTGCGCAGTaGAGGAGAAAGCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: RPHLLGPGSPCLHTLSKRGQCAQ*RRKQQE
Trigger: TTCCTGCTGCTTTCTCCTCCACTGCGCACACTGGCC...TCTCTTGCTGAGTGTGTGAAGACAGGGAGAGCCAGGCCCCAGCAGATGCGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp AGGCCGCATCTGCTGGGGCCTGGCTCTCCCTGTCTTCACACACTCAGCAAGAGAGACCAAGAGGAGCTATaGCTGGGCTGTGGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: RPHLLGPGSPCLHTLSKRDQEEL*LGCGQG
Trigger: ACCCTGACCACAGCCCAGCCATAGCTCCTCTTGGTC...TCTCTTGCTGAGTGTGTGAAGACAGGGAGAGCCAGGCCCCAGCAGATGCGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp TCAGATACACTTCCCTCTGTGCAGGGGGATACACCAGCCTCCTGCCAGGTTCTGGGTAAGCATCTCCTCTaGCCTCCACCCCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SDTLPSVQGDTPASCQVLGKHLL*PPPQGQ
Trigger: CTGCCCCTGGGGTGGAGGCCAGAGGAGATGCTTACC...CAGAACCTGGCAGGAGGCTGGTGTATCCCCCTGCACAGAGGGAAGTGTATCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp CTTCTGCTCTGGGTTTTTAGCACCAGCTCTGAATGCCAAGACCACCCCCAAGTTAGGGCACAGCGGAGTTaGGGCCAGGGCCAGTGTGCG +
Preference number: 4 (lower is better)
Translates to: LLLWVFSTSSECQDHPQVRAQRS*GQGQCA
Trigger: CGCACACTGGCCCTGGCCTCAACTCCGCTGTGCCCT...AACTTGGGGGTGGTCTTGGCATTCAGAGCTGGTGCTAAAAACCCAGAGCAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp CCAGGGGCAGAGCAAACATGGCAACCAGGGGCCTGCACTGTCCTGGGACCAAGACCAGTTAAGGCTGGATaGACCTGGTCAGTCCCTTAC +
Preference number: 4 (lower is better)
Translates to: PGAEQTWQPGACTVLGPRPVKAG*TWSVPY
Trigger: GTAAGGGACTGACCAGGTTCATCCAGCCTTAACTGG...TCTTGGTCCCAGGACAGTGCAGGCCCCTGGTTGCCATGTTTGCTCTGCCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp TGTACCTATGGCTGCCATATCATCGGGCCAGAGCCGCCCTGGGCTCCAGGAGAGGGAAGGCCAGACTGTTaGGATGGACATGGAAACCAG +
Preference number: 4 (lower is better)
Translates to: CTYGCHIIGPEPPWAPGEGRPDC*DGHGNQ
Trigger: CTGGTTTCCATGTCCATCTCAACAGTCTGGCCTTCC...CTCTCCTGGAGCCCAGGGCGGCTCTGGCCCGATGATATGGCAGCCATAGGTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp AAGAGTGGAAGAGCTCTAATGTCCAAGGGCTGCAGCCCACTCAGAGGAGGTTACTGCCCTGGCCGGACGTaGCATTCCCAGCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: KSGRALMSKGCSPLRGGYCPGRT*HSQPSP
Trigger: GGGAGAAGGCTGGGAATGGCACGTCCGGCCAGGGCA...GTAACCTCCTCTGAGTGGGCTGCAGCCCTTGGACATTAGAGCTCTTCCACTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp CCAGGGGCAGAGCAAACATGGCAACCAGGGGCCTGCACTGTCCTGGGACCAAGAACCTGTACCTATGGCTaGCATATCATCGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: PGAEQTWQPGACTVLGPRTCTYG*HIIGPE
Trigger: CTCTGGCCCGATGATATGGCAGCCATAGGTACAGGT...TCTTGGTCCCAGGACAGTGCAGGCCCCTGGTTGCCATGTTTGCTCTGCCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp TGTGCTAGGCCGCATCTGCTGGGGCCTGGCTCTCCCTGTCTTCACACACTCAGCATACACTTCCCTCTGTaGAGGGGGATACACCAGCCT +
Preference number: 4 (lower is better)
Translates to: CARPHLLGPGSPCLHTLSIHFPL*RGIHQP
Trigger: AGGCTGGTGTATCCCCCTGCACAGAGGGAAGTGTAT...GCTGAGTGTGTGAAGACAGGGAGAGCCAGGCCCCAGCAGATGCGGCCTAGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp GGTCCCATGGCACTGTATTCAGTATCAGACACAGGTCTGAAGAACTCTGGGGTCGTGGGAGCGGAGTCCTaGGCCTGCCCAGGTGATGGC +
Preference number: 4 (lower is better)
Translates to: GPMALYSVSDTGLKNSGVVGAES*ACPGDG
Trigger: GCCATCACCTGGGCAGGCCCAGGACTCCGCTCCCAC...GACCCCAGAGTTCTTCAGACCTGTGTCTGATACTGAATACAGTGCCATGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp CCAGGGGCAGAGCAAACATGGCAACCAGGGGCCTGCACTGTCCTGGGACCAAGACTTCTCTTTCCATGGTaGCCTCTGGCTGTGAAGCGT +
Preference number: 4 (lower is better)
Translates to: PGAEQTWQPGACTVLGPRLLFPW*PLAVKR
Trigger: ACGCTTCACAGCCAGAGGCCACCATGGAAAGAGAAG...TCTTGGTCCCAGGACAGTGCAGGCCCCTGGTTGCCATGTTTGCTCTGCCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp CCTATGGCTGCCATATCATCGGGCCAGAGCCGCCCTGGGCTCCAGGAGAGGAGATCTCTTCTCTTTCCATaGTGGCCTCTGGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: PMAAISSGQSRPGLQERRSLLFP*WPLAVK
Trigger: CTTCACAGCCAGAGGCCACCATGGAAAGAGAAGAGA...TCTCCTCTCCTGGAGCCCAGGGCGGCTCTGGCCCGATGATATGGCAGCCATAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp TTGGGAACCCTGGGTGGCAGCGTTCAAACCCTGGGTGAACTCTCAAGGTCTCAGGGGGCAGAGCAAACATaGCAACCAGGGGCCTGCACT +
Preference number: 4 (lower is better)
Translates to: LGTLGGSVQTLGELSRSQGAEQT*QPGACT
Trigger: AGTGCAGGCCCCTGGTTGCCATGTTTGCTCTGCCCC...CTGAGACCTTGAGAGTTCACCCAGGGTTTGAACGCTGCCACCCAGGGTTCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp CCTATGGCTGCCATATCATCGGGCCAGAGCCGCCCTGGGCTCCAGGAGAGGAGATGGAGCAGGGTCCCATaGCACTGTATTCAGTATCAG +
Preference number: 4 (lower is better)
Translates to: PMAAISSGQSRPGLQERRWSRVP*HCIQYQ
Trigger: CTGATACTGAATACAGTGCCATGGGACCCTGCTCCA...TCTCCTCTCCTGGAGCCCAGGGCGGCTCTGGCCCGATGATATGGCAGCCATAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp AGGCCGCATCTGCTGGGGCCTGGCTCTCCCTGTCTTCACACACTCAGCAAGAGATACCCTGCCCTCTCATaGACTGGGCTAACTGAAGGC +
Preference number: 4 (lower is better)
Translates to: RPHLLGPGSPCLHTLSKRYPALS*TGLTEG
Trigger: GCCTTCAGTTAGCCCAGTCCATGAGAGGGCAGGGTA...TCTCTTGCTGAGTGTGTGAAGACAGGGAGAGCCAGGCCCCAGCAGATGCGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp AGGCCGCATCTGCTGGGGCCTGGCTCTCCCTGTCTTCACACACTCAGCAAGAGACTCCTGCAGTCTTGTTaGTCTCTGTCACACCCACAC +
Preference number: 4 (lower is better)
Translates to: RPHLLGPGSPCLHTLSKRLLQSC*SLSHPH
Trigger: GTGTGGGTGTGACAGAGATCAACAAGACTGCAGGAG...TCTCTTGCTGAGTGTGTGAAGACAGGGAGAGCCAGGCCCCAGCAGATGCGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp AGGGGCTTGCTAGGTTTCCCATCAAAGCACAAACCATGCTCCTGGTATGGGAAGGGTGGCCTCTGGCTGTaGAGCGTCTGCTGGGACGTC +
Preference number: 4 (lower is better)
Translates to: RGLLGFPSKHKPCSWYGKGGLWL*SVCWDV
Trigger: GACGTCCCAGCAGACGCTTCACAGCCAGAGGCCACC...CTTCCCATACCAGGAGCATGGTTTGTGCTTTGATGGGAAACCTAGCAAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp AGGCCGCATCTGCTGGGGCCTGGCTCTCCCTGTCTTCACACACTCAGCAAGAGATCCTGCAAAATCCCATaGTGGACGACTGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: RPHLLGPGSPCLHTLSKRSCKIP*WTTGSL
Trigger: CAGAGAGCCAGTCGTCCATCATGGGATTTTGCAGGA...TCTCTTGCTGAGTGTGTGAAGACAGGGAGAGCCAGGCCCCAGCAGATGCGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp AGGCCGCATCTGCTGGGGCCTGGCTCTCCCTGTCTTCACACACTCAGCAAGAGATATGGGAAGCTCAGATaGAGTGGCTTGCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RPHLLGPGSPCLHTLSKRYGKLR*SGLLPG
Trigger: TCCTGGGAGCAAGCCACTTCATCTGAGCTTCCCATA...TCTCTTGCTGAGTGTGTGAAGACAGGGAGAGCCAGGCCCCAGCAGATGCGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp AGGCCGCATCTGCTGGGGCCTGGCTCTCCCTGTCTTCACACACTCAGCAAGAGAGGGAGGAGGCCCTTCTaGACTCAGTCATCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: RPHLLGPGSPCLHTLSKRGRRPF*TQSSLA
Trigger: AGCTAAAGATGACTGAGTGCAGAAGGGCCTCCTCCC...TCTCTTGCTGAGTGTGTGAAGACAGGGAGAGCCAGGCCCCAGCAGATGCGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp CCCGAGGTAGCAGCAACATCCCTGCAGCAGGGGGACGGGCAGGTTGTAGGCAGTTCAAAGCACAAACCATaGTCCTGGTATGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: PEVAATSLQQGDGQVVGSSKHKP*SWYGKL
Trigger: GAGCTTCCCATACCAGGAGCATGGTTTGTGCTTTGA...ACTGCCTACAACCTGCCCGTCCCCCTGCTGCAGGGATGTTGCTGCTACCTCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp TGTGCTAGGCCGCATCTGCTGGGGCCTGGCTCTCCCTGTCTTCACACACTCAGCCCCAGGATGTGTGTTTaGGGACTCTATCCCTATCCT +
Preference number: 4 (lower is better)
Translates to: CARPHLLGPGSPCLHTLSPRMCV*GLYPYP
Trigger: AGGATAGGGATAGAGTCCCCAAACACACATCCTGGG...GCTGAGTGTGTGAAGACAGGGAGAGCCAGGCCCCAGCAGATGCGGCCTAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp TGTGCTAGGCCGCATCTGCTGGGGCCTGGCTCTCCCTGTCTTCACACACTCAGCCTGAGTAGGAGGTTATaGTGGGGTTGGGGAGTAACA +
Preference number: 4 (lower is better)
Translates to: CARPHLLGPGSPCLHTLSLSRRL*WGWGVT
Trigger: TGTTACTCCCCAACCCCACCATAACCTCCTACTCAG...GCTGAGTGTGTGAAGACAGGGAGAGCCAGGCCCCAGCAGATGCGGCCTAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp CCTATGGCTGCCATATCATCGGGCCAGAGCCGCCCTGGGCTCCAGGAGAGGAGACCTCCTCCTCCGAACTaGAGCCAATCTTCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: PMAAISSGQSRPGLQERRPPPPN*SQSSSL
Trigger: TAAAGAAGAAGATTGGCTCCAGTTCGGAGGAGGAGG...TCTCCTCTCCTGGAGCCCAGGGCGGCTCTGGCCCGATGATATGGCAGCCATAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CAA 72 bp GTGCCTCATACAAGGAAGACAAAGGGCACAGCGGAGTaGAGGCCAGGGCCAGTGTGCGCAGTGGAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: VPHTRKTKGTAE*RPGPVCAVEEK
Trigger: TTTCTCCTCCACTGCGCACACTGGCCCTGGCCTCAACTCCGCTGTGCCCTTTGTCTTCCTTGTATGAGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp TGTGCTAGGCCGCATCTGCTGGGGCCTGGCTCTCCCTGTCTTCACACACTCAGCAGAACGTTCTCCTCTTaGTGCAAAGAGCCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: CARPHLLGPGSPCLHTLSRTFSS*CKEPQN
Trigger: ATTCTGGGGCTCTTTGCAGCAAGAGGAGAACGTTCT...GCTGAGTGTGTGAAGACAGGGAGAGCCAGGCCCCAGCAGATGCGGCCTAGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp GCCACCTTGTTCAAGAAAAAGAACGTTCTCCTCTTGCTGCAAAGAGCCCCAGAAATCCCAGGAGGAGGATaGCGCACCGCCTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: ATLFKKKNVLLLLQRAPEIPGGG*RTACPG
Trigger: GCCAGGGCAGGCGGTGCGGCATCCTCCTCCTGGGAT...TTCTGGGGCTCTTTGCAGCAAGAGGAGAACGTTCTTTTTCTTGAACAAGGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp TCAGACACAGGTCTGAAGAACTCTGGGGTCACCCTGGCAATGGTCCTGGACAACCTGCAGGTGCCCTACTaGAGTGACTCCTACGAGGGA +
Preference number: 4 (lower is better)
Translates to: SDTGLKNSGVTLAMVLDNLQVPY*SDSYEG
Trigger: TCCCTCGTAGGAGTCACTGCAGTAGGGCACCTGCAG...GTTGTCCAGGACCATTGCCAGGGTGACCCCAGAGTTCTTCAGACCTGTGTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp CTTTCTAGGCCATGGCCTGTCATCAAGCCAAACACATCATTCCTCATCCAGCCTCCGCGTCAGTCCCACTaGCCAGCTGTGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LSRPWPVIKPNTSFLIQPPRQSH*PAVLLQ
Trigger: CTGCAGGAGCACAGCTGGCCAGTGGGACTGACGCGG...AGGCTGGATGAGGAATGATGTGTTTGGCTTGATGACAGGCCATGGCCTAGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp CCTATGGCTGCCATATCATCGGGCCAGAGCCGCCCTGGGCTCCAGGAGAGGAGAGGACAAGCTCAAGAGTaGAAGAGCTCTAATGTCCAA +
Preference number: 4 (lower is better)
Translates to: PMAAISSGQSRPGLQERRGQAQE*KSSNVQ
Trigger: TTGGACATTAGAGCTCTTCCACTCTTGAGCTTGTCC...TCTCCTCTCCTGGAGCCCAGGGCGGCTCTGGCCCGATGATATGGCAGCCATAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp GATGGACATGGAAACCAGGTGAGGCTTTGGATGGAAAGCTGGTCTGGGCCAAGGAGATGGGAGAAACCTTaGGAACCCTGGGTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: DGHGNQVRLWMESWSGPRRWEKP*EPWVAA
Trigger: CGCTGCCACCCAGGGTTCCCAAGGTTTCTCCCATCT...CCTTGGCCCAGACCAGCTTTCCATCCAAAGCCTCACCTGGTTTCCATGTCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp TATGTGCAGCATCTAAGACCAGACACCAGTCTCAGAGAGCCTCCCGAGGTAGCACTGGGTCTAAGGTCCTaGACTCCAGCAGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: YVQHLRPDTSLREPPEVALGLRS*TPAAAG
Trigger: CCCAGCTGCTGCTGGAGTCCAGGACCTTAGACCCAG...TGCTACCTCGGGAGGCTCTCTGAGACTGGTGTCTGGTCTTAGATGCTGCACATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp TCAGACACAGGTCTGAAGAACTCTGGGGTCACCCTGGCAATGGTCCTGGACAACGATGGAAAGCTGGTCTaGGCCAAGGCCTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SDTGLKNSGVTLAMVLDNDGKLV*AKASAG
Trigger: TCCTGCAGAGGCCTTGGCCCAGACCAGCTTTCCATC...GTTGTCCAGGACCATTGCCAGGGTGACCCCAGAGTTCTTCAGACCTGTGTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CAA 72 bp CCTGGCAATGGTCCTGGACAACCTGGTGGGATCCTTTaGCTCATCCTGGGTCTAAGGTCCTGGACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PGNGPGQPGGIL*LILGLRSWTPA
Trigger: TGCTGGAGTCCAGGACCTTAGACCCAGGATGAGCAAAAGGATCCCACCAGGTTGTCCAGGACCATTGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp GATGGACATGGAAACCAGGTGAGGCTTTGGATGGAAAGCTGGTCTGGGCCAAGGCGTTCAAACCCTGGGTaGACTCTCAAGGTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: DGHGNQVRLWMESWSGPRRSNPG*TLKVSG
Trigger: GCCTGAGACCTTGAGAGTTCACCCAGGGTTTGAACG...CCTTGGCCCAGACCAGCTTTCCATCCAAAGCCTCACCTGGTTTCCATGTCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp GGTCCCATGGCACTGTATTCAGTATCAGACACAGGTCTGAAGAACTCTGGGGTCTGGCAACCAGGGGCCTaGACTGTCCTGGGACCAAGA +
Preference number: 4 (lower is better)
Translates to: GPMALYSVSDTGLKNSGVWQPGA*TVLGPR
Trigger: TCTTGGTCCCAGGACAGTGCAGGCCCCTGGTTGCCA...GACCCCAGAGTTCTTCAGACCTGTGTCTGATACTGAATACAGTGCCATGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp CTTCCGTGCAGAATGCCCACATTTTGTGTTCGACATCTGACCAGATGGGAGAAAGTGCTAGGCCGCATCTaGTGGGGCCTGGCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LPCRMPTFCVRHLTRWEKVLGRI*WGLALP
Trigger: AGGGAGAGCCAGGCCCCAGCAGATGCGGCCTAGCAC...TTTCTCCCATCTGGTCAGATGTCGAACACAAAATGTGGGCATTCTGCACGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp GATGGACATGGAAACCAGGTGAGGCTTTGGATGGAAAGCTGGTCTGGGCCAAGGTGTACACGTAAGCCCTaGTCACTCTACCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: DGHGNQVRLWMESWSGPRCTRKP*SLYQGL
Trigger: CAGGCCCTGGTAGAGTGAGCAGGGCTTACGTGTACA...CCTTGGCCCAGACCAGCTTTCCATCCAAAGCCTCACCTGGTTTCCATGTCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp GGACAACCTGGTGGGATCCTTTTGCTCATCCTGGGTCTAAGGTCCTGGACTCCACTGGGCCAAGGCCTCTaGAGGATGAGTAGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: GQPGGILLLILGLRSWTPLGQGL*RMSSSC
Trigger: ACAGCTACTACTCATCCTGCAGAGGCCTTGGCCCAG...TGGAGTCCAGGACCTTAGACCCAGGATGAGCAAAAGGATCCCACCAGGTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp TGGATCCTGAAGCAGGAAAAAGCCCACCAGCATCAGCATAAAAGAAAGGCAGGCGTGGTGGGAGGGCCATaGCAAGGCCACACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: WILKQEKAHQHQHKRKAGVVGGP*QGHTAA
Trigger: TGCAGCTGTGTGGCCTTGCCATGGCCCTCCCACCAC...GCCTGCCTTTCTTTTATGCTGATGCTGGTGGGCTTTTTCCTGCTTCAGGATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp GTACTTAAGAAAGGCTGCACCTGCAATACCTGTACCTATGGCTGCCATATCATCGGGCCAGAGCCGCCCTaGGCTCCAGGAGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VLKKGCTCNTCTYGCHIIGPEPP*APGEEK
Trigger: CTTCTCCTCTCCTGGAGCCCAGGGCGGCTCTGGCCC...GATGATATGGCAGCCATAGGTACAGGTATTGCAGGTGCAGCCTTTCTTAAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp TGTGGTCAGGGTGTGTGGCTTTCTAGGCCATGGCCTGTCATCAAGCCAAACACACCCTGGCAATGGTCCTaGACAACCTGGTGGGATCCT +
Preference number: 4 (lower is better)
Translates to: CGQGVWLSRPWPVIKPNTPWQWS*TTWWDP
Trigger: AGGATCCCACCAGGTTGTCCAGGACCATTGCCAGGG...TGTGTTTGGCTTGATGACAGGCCATGGCCTAGAAAGCCACACACCCTGACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp GGATACACCAGCCTCCTGCCAGGTTCTGGAAGCTCACCTTATAATCTACCAGGAGGGTCACCCTGGCAATaGTCCTGGACAACCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GYTSLLPGSGSSPYNLPGGSPWQ*SWTTWW
Trigger: CCACCAGGTTGTCCAGGACCATTGCCAGGGTGACCC...TCCTGGTAGATTATAAGGTGAGCTTCCAGAACCTGGCAGGAGGCTGGTGTATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp TTGGGAACCCTGGGTGGCAGCGTTCAAACCCTGGGTGAACTCTCAAGGTCTCAGAGCTCCCAGAGAAGCTaGACTCACTGTGCGGGATTA +
Preference number: 4 (lower is better)
Translates to: LGTLGGSVQTLGELSRSQSSQRS*THCAGL
Trigger: TAATCCCGCACAGTGAGTCCAGCTTCTCTGGGAGCT...CTGAGACCTTGAGAGTTCACCCAGGGTTTGAACGCTGCCACCCAGGGTTCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp TTGGGAACCCTGGGTGGCAGCGTTCAAACCCTGGGTGAACTCTCAAGGTCTCAGCCTGGAGCTTTGGAGTaGGGGCTGTGTTCAAATTCT +
Preference number: 4 (lower is better)
Translates to: LGTLGGSVQTLGELSRSQPGALE*GLCSNS
Trigger: AGAATTTGAACACAGCCCTCACTCCAAAGCTCCAGG...CTGAGACCTTGAGAGTTCACCCAGGGTTTGAACGCTGCCACCCAGGGTTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp AAGAGTGGAAGAGCTCTAATGTCCAAGGGCTGCAGCCCACTCAGAGGAGGTTACAGCAGGCCCAGGCCCTaGAACGGCATTATTTTAGGC +
Preference number: 4 (lower is better)
Translates to: KSGRALMSKGCSPLRGGYSRPRP*NGIILG
Trigger: GCCTAAAATAATGCCGTTTCAGGGCCTGGGCCTGCT...GTAACCTCCTCTGAGTGGGCTGCAGCCCTTGGACATTAGAGCTCTTCCACTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp AAGAGTGGAAGAGCTCTAATGTCCAAGGGCTGCAGCCCACTCAGAGGAGGTTACGCAGAGGCTTGGAGATaGGAAGAGCTGGGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: KSGRALMSKGCSPLRGGYAEAWR*EELGSK
Trigger: CTTGCTTCCCAGCTCTTCTCATCTCCAAGCCTCTGC...GTAACCTCCTCTGAGTGGGCTGCAGCCCTTGGACATTAGAGCTCTTCCACTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp TGGATCCTGAAGCAGGAAAAAGCCCACCAGCATCAGCATAAAAGAAAGGCAGGCACTGTGCGGGATTACTaGGGGTGTGGCTGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: WILKQEKAHQHQHKRKAGTVRDY*GCGCQA
Trigger: AGCCTGGCAGCCACACCCTCAGTAATCCCGCACAGT...GCCTGCCTTTCTTTTATGCTGATGCTGGTGGGCTTTTTCCTGCTTCAGGATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp GTACTTAAGAAAGGCTGCACCTGCAATACCTGTACCTATGGCTGCCATATCATCGCGGAGTCCTGGGCCTaGCCAGGTGATGGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: VLKKGCTCNTCTYGCHIIAESWA*PGDGSV
Trigger: GACAGAGCCATCACCTGGGCAGGCCCAGGACTCCGC...GATGATATGGCAGCCATAGGTACAGGTATTGCAGGTGCAGCCTTTCTTAAGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp AAGAGTGGAAGAGCTCTAATGTCCAAGGGCTGCAGCCCACTCAGAGGAGGTTACCCCCCTTACAGGATCTaGTGGTCACAGGAAGACAGC +
Preference number: 4 (lower is better)
Translates to: KSGRALMSKGCSPLRGGYPPYRI*WSQEDS
Trigger: GCTGTCTTCCTGTGACCAGCAGATCCTGTAAGGGGG...GTAACCTCCTCTGAGTGGGCTGCAGCCCTTGGACATTAGAGCTCTTCCACTCTT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp AAGAGTGGAAGAGCTCTAATGTCCAAGGGCTGCAGCCCACTCAGAGGAGGTTACGATACACCAGCCTCCTaGCAGGTTCTGGAAGCTCAC +
Preference number: 4 (lower is better)
Translates to: KSGRALMSKGCSPLRGGYDTPAS*QVLEAH
Trigger: GTGAGCTTCCAGAACCTGGCAGGAGGCTGGTGTATC...GTAACCTCCTCTGAGTGGGCTGCAGCCCTTGGACATTAGAGCTCTTCCACTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp GTACTTAAGAAAGGCTGCACCTGCAATACCTGTACCTATGGCTGCCATATCATCACGGGCTTGGACAAGTaGGGGAAGGAGCGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: VLKKGCTCNTCTYGCHIITGLDK*GKERLA
Trigger: GGCCAGCCGCTCCTTCCCCCACTTGTCCAAGCCCGT...GATGATATGGCAGCCATAGGTACAGGTATTGCAGGTGCAGCCTTTCTTAAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp GATGGACATGGAAACCAGGTGAGGCTTTGGATGGAAAGCTGGTCTGGGCCAAGGTCTGGTTATGGGAGGTaGAGGATCCAGCCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: DGHGNQVRLWMESWSGPRSGYGR*RIQPRK
Trigger: TTTCCTCGGCTGGATCCTCCACCTCCCATAACCAGA...CCTTGGCCCAGACCAGCTTTCCATCCAAAGCCTCACCTGGTTTCCATGTCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp TGTGGTCAGGGTGTGTGGCTTTCTAGGCCATGGCCTGTCATCAAGCCAAACACATGTGGTCAGGGTGTGTaGCTTTCTAGGCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: CGQGVWLSRPWPVIKPNTCGQGV*LSRPWP
Trigger: AGGCCATGGCCTAGAAAGCCACACACCCTGACCACA...TGTGTTTGGCTTGATGACAGGCCATGGCCTAGAAAGCCACACACCCTGACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp GATGGACATGGAAACCAGGTGAGGCTTTGGATGGAAAGCTGGTCTGGGCCAAGGGTACATGCTTCATTCTaGCTCTCACAGCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: DGHGNQVRLWMESWSGPRVHASF*LSQQAQ
Trigger: CTGGGCCTGCTGTGAGAGCCAGAATGAAGCATGTAC...CCTTGGCCCAGACCAGCTTTCCATCCAAAGCCTCACCTGGTTTCCATGTCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp TCAGACACAGGTCTGAAGAACTCTGGGGTCACCCTGGCAATGGTCCTGGACAACTTTATATGGCAGTGGTaGTGGGAAGGGGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SDTGLKNSGVTLAMVLDNFIWQW*WEGEQR
Trigger: CCTCTGCTCCCCTTCCCACCACCACTGCCATATAAA...GTTGTCCAGGACCATTGCCAGGGTGACCCCAGAGTTCTTCAGACCTGTGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp GATGGACATGGAAACCAGGTGAGGCTTTGGATGGAAAGCTGGTCTGGGCCAAGGTGTAGGCAGTTAGATTaGAGCAGGGTCCCATGGCAC +
Preference number: 4 (lower is better)
Translates to: DGHGNQVRLWMESWSGPRCRQLD*SRVPWH
Trigger: GTGCCATGGGACCCTGCTCCAATCTAACTGCCTACA...CCTTGGCCCAGACCAGCTTTCCATCCAAAGCCTCACCTGGTTTCCATGTCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp GGATACACCAGCCTCCTGCCAGGTTCTGGAAGCTCACCTTATAATCTACCAGGAGGAGACAGTTTGTGGTaGGCACGTGGTGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: GYTSLLPGSGSSPYNLPGGDSLW*ARGETW
Trigger: CCAGGTTTCACCACGTGCTCACCACAAACTGTCTCC...TCCTGGTAGATTATAAGGTGAGCTTCCAGAACCTGGCAGGAGGCTGGTGTATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp GATGGACATGGAAACCAGGTGAGGCTTTGGATGGAAAGCTGGTCTGGGCCAAGGCTGAGACCTCCTCTCTaGCATCAGGGTCAGATATCA +
Preference number: 4 (lower is better)
Translates to: DGHGNQVRLWMESWSGPRLRPPL*HQGQIS
Trigger: TGATATCTGACCCTGATGTCAGAGAGGAGGTCTCAG...CCTTGGCCCAGACCAGCTTTCCATCCAAAGCCTCACCTGGTTTCCATGTCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp TATGTGCAGCATCTAAGACCAGACACCAGTCTCAGAGAGCCTCCCGAGGTAGCATATCAGACACAGGTCTaGAGAACTCTGGGGTCACCC +
Preference number: 4 (lower is better)
Translates to: YVQHLRPDTSLREPPEVAYQTQV*RTLGSP
Trigger: GGGTGACCCCAGAGTTCTTCAGACCTGTGTCTGATA...TGCTACCTCGGGAGGCTCTCTGAGACTGGTGTCTGGTCTTAGATGCTGCACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp CATTCCCAGCCTTCTCCCAGGGAACCGGCCACCTTGTTCAAGAAAAAGAACGTTATGGACTGGGCTAACTaGAGGCCAAGCTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: HSQPSPREPATLFKKKNVMDWAN*RPSSQR
Trigger: TCTCTGGGAGCTTGGCCTTCAGTTAGCCCAGTCCAT...AACGTTCTTTTTCTTGAACAAGGTGGCCGGTTCCCTGGGAGAAGGCTGGGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp CTTCTGCTCTGGGTTTTTAGCACCAGCTCTGAATGCCAAGACCACCCCCAAGTTCCCACTGGCCAGCTGTaGTCCTGCAGTCTTGTTGAT +
Preference number: 4 (lower is better)
Translates to: LLLWVFSTSSECQDHPQVPTGQL*SCSLVD
Trigger: ATCAACAAGACTGCAGGAGCACAGCTGGCCAGTGGG...AACTTGGGGGTGGTCTTGGCATTCAGAGCTGGTGCTAAAAACCCAGAGCAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp TCAGATACACTTCCCTCTGTGCAGGGGGATACACCAGCCTCCTGCCAGGTTCTGGGGGAGCGGTACCTGTaGTCTATCATTCAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: SDTLPSVQGDTPASCQVLGERYL*SIIQFF
Trigger: GAAAAACTGAATGATAGAGCACAGGTACCGCTCCCC...CAGAACCTGGCAGGAGGCTGGTGTATCCCCCTGCACAGAGGGAAGTGTATCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp GGATACACCAGCCTCCTGCCAGGTTCTGGAAGCTCACCTTATAATCTACCAGGATCCTCCTCATTACCCTaGCCTCTCATGGACTGGGCT +
Preference number: 4 (lower is better)
Translates to: GYTSLLPGSGSSPYNLPGSSSLP*PLMDWA
Trigger: AGCCCAGTCCATGAGAGGGCAGGGTAATGAGGAGGA...TCCTGGTAGATTATAAGGTGAGCTTCCAGAACCTGGCAGGAGGCTGGTGTATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp TATGTGCAGCATCTAAGACCAGACACCAGTCTCAGAGAGCCTCCCGAGGTAGCAGGAAGTCATTCACTTTaGCCCCCATGGCTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: YVQHLRPDTSLREPPEVAGSHSL*PPWLCP
Trigger: TGGGCAAAGCCATGGGGGCCAAAGTGAATGACTTCC...TGCTACCTCGGGAGGCTCTCTGAGACTGGTGTCTGGTCTTAGATGCTGCACATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp AAGAGTGGAAGAGCTCTAATGTCCAAGGGCTGCAGCCCACTCAGAGGAGGTTACGAGGGGTTCGCTTTCTaGTTATGGGAGGTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: KSGRALMSKGCSPLRGGYEGFAF*LWEVED
Trigger: ATCCTCCACCTCCCATAACCAGAAAGCGAACCCCTC...GTAACCTCCTCTGAGTGGGCTGCAGCCCTTGGACATTAGAGCTCTTCCACTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp GGTCCCATGGCACTGTATTCAGTATCAGACACAGGTCTGAAGAACTCTGGGGTCAAAGGACAGCAGGTCTaGGTGAGGGCCCTCATTGTC +
Preference number: 4 (lower is better)
Translates to: GPMALYSVSDTGLKNSGVKGQQV*VRALIV
Trigger: GACAATGAGGGCCCTCACCCAGACCTGCTGTCCTTT...GACCCCAGAGTTCTTCAGACCTGTGTCTGATACTGAATACAGTGCCATGGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp TCAGACACAGGTCTGAAGAACTCTGGGGTCACCCTGGCAATGGTCCTGGACAACATTGTCCTGAGCTGGTaGCCCTGCAATTCACTGAGA +
Preference number: 4 (lower is better)
Translates to: SDTGLKNSGVTLAMVLDNIVLSW*PCNSLR
Trigger: TCTCAGTGAATTGCAGGGCCACCAGCTCAGGACAAT...GTTGTCCAGGACCATTGCCAGGGTGACCCCAGAGTTCTTCAGACCTGTGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp CATTCCCAGCCTTCTCCCAGGGAACCGGCCACCTTGTTCAAGAAAAAGAACGTTAAGAGGAGCTATGGCTaGGCTGTGGTCAGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: HSQPSPREPATLFKKKNVKRSYG*AVVRVC
Trigger: ACACACCCTGACCACAGCCCAGCCATAGCTCCTCTT...AACGTTCTTTTTCTTGAACAAGGTGGCCGGTTCCCTGGGAGAAGGCTGGGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp GCCACCTTGTTCAAGAAAAAGAACGTTCTCCTCTTGCTGCAAAGAGCCCCAGAACTTGGGAACCCTGGGTaGCAGCGTTCAAACCCTGGG +
Preference number: 4 (lower is better)
Translates to: ATLFKKKNVLLLLQRAPELGNPG*QRSNPG
Trigger: CCCAGGGTTTGAACGCTGCCACCCAGGGTTCCCAAG...TTCTGGGGCTCTTTGCAGCAAGAGGAGAACGTTCTTTTTCTTGAACAAGGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp GGACAACCTGGTGGGATCCTTTTGCTCATCCTGGGTCTAAGGTCCTGGACTCCATGGTCCTGGACAACCTaGTGGGATCCTTTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: GQPGGILLLILGLRSWTPWSWTT*WDPFAH
Trigger: ATGAGCAAAAGGATCCCACCAGGTTGTCCAGGACCA...TGGAGTCCAGGACCTTAGACCCAGGATGAGCAAAAGGATCCCACCAGGTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CAA 72 bp ATTTTGTGTTCGACATCTGACCAGATGGGAGAAACCTaGGGAACCCTGGGTGGCAGCGTTCAAACCCTGGGT +
Preference number: 4 (lower is better)
Translates to: ILCSTSDQMGET*GTLGGSVQTLG
Trigger: ACCCAGGGTTTGAACGCTGCCACCCAGGGTTCCCAAGGTTTCTCCCATCTGGTCAGATGTCGAACACAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CAA 72 bp TGCCATTCCCAGCCTTCTCCCAGGGAACCGGCCACCTaGTTCAAGAAAAAGAACGTTCTCCTCTTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: CHSQPSPREPAT*FKKKNVLLLLQ
Trigger: TTGCAGCAAGAGGAGAACGTTCTTTTTCTTGAACAAGGTGGCCGGTTCCCTGGGAGAAGGCTGGGAATGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp AGGGGCTTGCTAGGTTTCCCATCAAAGCACAAACCATGCTCCTGGTATGGGAAGCCCTTACATGGATCCTaGAGCAGGAAAAAGCCCACC +
Preference number: 4 (lower is better)
Translates to: RGLLGFPSKHKPCSWYGKPLHGS*SRKKPT
Trigger: GGTGGGCTTTTTCCTGCTTCAGGATCCATGTAAGGG...CTTCCCATACCAGGAGCATGGTTTGTGCTTTGATGGGAAACCTAGCAAGCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp GCCACCTTGTTCAAGAAAAAGAACGTTCTCCTCTTGCTGCAAAGAGCCCCAGAAGTGGTGAGCACGTGGTaGAACCTGGCTTTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: ATLFKKKNVLLLLQRAPEVVSTW*NLAFWE
Trigger: CTCCCAGAAAGCCAGGTTTCACCACGTGCTCACCAC...TTCTGGGGCTCTTTGCAGCAAGAGGAGAACGTTCTTTTTCTTGAACAAGGTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp AGGGGCTTGCTAGGTTTCCCATCAAAGCACAAACCATGCTCCTGGTATGGGAAGGATACAGCTGTGTGCTaGGTAGGAGGTTATGGTGGG +
Preference number: 4 (lower is better)
Translates to: RGLLGFPSKHKPCSWYGKDTAVC*VGGYGG
Trigger: CCCACCATAACCTCCTACTCAGCACACAGCTGTATC...CTTCCCATACCAGGAGCATGGTTTGTGCTTTGATGGGAAACCTAGCAAGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp CATACATGTATGTCTTCCATATCAGCCACATACACAACATTCAGATACACTTCCGGATGCCGCACCGCCTaGCCTGGCCGGACGTGCCAT +
Preference number: 4 (lower is better)
Translates to: HTCMSSISATYTTFRYTSGCRTA*PGRTCH
Trigger: ATGGCACGTCCGGCCAGGGCAGGCGGTGCGGCATCC...GGAAGTGTATCTGAATGTTGTGTATGTGGCTGATATGGAAGACATACATGTATG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp GGTCCCATGGCACTGTATTCAGTATCAGACACAGGTCTGAAGAACTCTGGGGTCCTGCAGAAGCAAGCATaGAGGAAGGAACCCACATCC +
Preference number: 4 (lower is better)
Translates to: GPMALYSVSDTGLKNSGVLQKQA*RKEPTS
Trigger: GGATGTGGGTTCCTTCCTGCATGCTTGCTTCTGCAG...GACCCCAGAGTTCTTCAGACCTGTGTCTGATACTGAATACAGTGCCATGGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp GTACTTAAGAAAGGCTGCACCTGCAATACCTGTACCTATGGCTGCCATATCATCCCTCATTGTCGAGGCTaGAGGTCCGTGCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: VLKKGCTCNTCTYGCHIIPHCRG*RSVPEE
Trigger: CTCCTCAGGCACGGACCTCCAGCCTCGACAATGAGG...GATGATATGGCAGCCATAGGTACAGGTATTGCAGGTGCAGCCTTTCTTAAGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp CTTCTGCTCTGGGTTTTTAGCACCAGCTCTGAATGCCAAGACCACCCCCAAGTTTCCATTGTCCTGAGCTaGTGGCCCTGCAATTCACTG +
Preference number: 4 (lower is better)
Translates to: LLLWVFSTSSECQDHPQVSIVLS*WPCNSL
Trigger: CAGTGAATTGCAGGGCCACCAGCTCAGGACAATGGA...AACTTGGGGGTGGTCTTGGCATTCAGAGCTGGTGCTAAAAACCCAGAGCAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp GGATACACCAGCCTCCTGCCAGGTTCTGGAAGCTCACCTTATAATCTACCAGGAGCAGCGTTCAAACCCTaGGTGAACTCTCAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: GYTSLLPGSGSSPYNLPGAAFKP*VNSQGL
Trigger: GAGACCTTGAGAGTTCACCCAGGGTTTGAACGCTGC...TCCTGGTAGATTATAAGGTGAGCTTCCAGAACCTGGCAGGAGGCTGGTGTATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp TGGATCCTGAAGCAGGAAAAAGCCCACCAGCATCAGCATAAAAGAAAGGCAGGCAAACCTTGGGAACCCTaGGTGGCAGCGTTCAAACCC +
Preference number: 4 (lower is better)
Translates to: WILKQEKAHQHQHKRKAGKPWEP*VAAFKP
Trigger: GGGTTTGAACGCTGCCACCCAGGGTTCCCAAGGTTT...GCCTGCCTTTCTTTTATGCTGATGCTGGTGGGCTTTTTCCTGCTTCAGGATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp CTTCTGCTCTGGGTTTTTAGCACCAGCTCTGAATGCCAAGACCACCCCCAAGTTGCACGTGGTGAAACCTaGCTTTCTGGGAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LLLWVFSTSSECQDHPQVARGET*LSGRRK
Trigger: CTTCCTTCTCCCAGAAAGCCAGGTTTCACCACGTGC...AACTTGGGGGTGGTCTTGGCATTCAGAGCTGGTGCTAAAAACCCAGAGCAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp AAGAGTGGAAGAGCTCTAATGTCCAAGGGCTGCAGCCCACTCAGAGGAGGTTACGAAGCTCAGATGAAGTaGCTTGCTCCCAGGATGTGT +
Preference number: 4 (lower is better)
Translates to: KSGRALMSKGCSPLRGGYEAQMK*LAPRMC
Trigger: ACACATCCTGGGAGCAAGCCACTTCATCTGAGCTTC...GTAACCTCCTCTGAGTGGGCTGCAGCCCTTGGACATTAGAGCTCTTCCACTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp GGTCCCATGGCACTGTATTCAGTATCAGACACAGGTCTGAAGAACTCTGGGGTCAGGTCTGAAGAACTCTaGGGTCACCCTGGCAATGGT +
Preference number: 4 (lower is better)
Translates to: GPMALYSVSDTGLKNSGVRSEEL*GHPGNG
Trigger: ACCATTGCCAGGGTGACCCCAGAGTTCTTCAGACCT...GACCCCAGAGTTCTTCAGACCTGTGTCTGATACTGAATACAGTGCCATGGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp TATGTGCAGCATCTAAGACCAGACACCAGTCTCAGAGAGCCTCCCGAGGTAGCAAGTAGGAGGTTATGGTaGGGTTGGGGAGTAACAAGG +
Preference number: 4 (lower is better)
Translates to: YVQHLRPDTSLREPPEVASRRLW*GWGVTR
Trigger: CCTTGTTACTCCCCAACCCCACCATAACCTCCTACT...TGCTACCTCGGGAGGCTCTCTGAGACTGGTGTCTGGTCTTAGATGCTGCACATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp GGTCCCATGGCACTGTATTCAGTATCAGACACAGGTCTGAAGAACTCTGGGGTCCATACTCCAGACTGCTaGGGACAGGCTGTGATGAAA +
Preference number: 4 (lower is better)
Translates to: GPMALYSVSDTGLKNSGVHTPDC*GQAVMK
Trigger: TTTCATCACAGCCTGTCCTCAGCAGTCTGGAGTATG...GACCCCAGAGTTCTTCAGACCTGTGTCTGATACTGAATACAGTGCCATGGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp CTTTCTAGGCCATGGCCTGTCATCAAGCCAAACACATCATTCCTCATCCAGCCTAAGGCCTCTGCAGGATaGGTAGTAGCTGTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LSRPWPVIKPNTSFLIQPKASAG*VVAVPA
Trigger: AGCAGGAACAGCTACTACTCATCCTGCAGAGGCCTT...AGGCTGGATGAGGAATGATGTGTTTGGCTTGATGACAGGCCATGGCCTAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp AGTCCTTCAGCCATTCTGCGGATAGACTCTTTAACTAGAACTACTCAAGGACTTCTGTCACACCCACACTaGCCAGGCTGGAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SPSAILRIDSLTRTTQGLLSHPH*PGWRAP
Trigger: AGGAGCCCTCCAGCCTGGGCAGTGTGGGTGTGACAG...AAGTCCTTGAGTAGTTCTAGTTAAAGAGTCTATCCGCAGAATGGCTGAAGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp CTTCCGTGCAGAATGCCCACATTTTGTGTTCGACATCTGACCAGATGGGAGAAAGGACGACTGGCTCTCTaGTGGTGCCTCATACAAGGA +
Preference number: 4 (lower is better)
Translates to: LPCRMPTFCVRHLTRWEKGRLAL*WCLIQG
Trigger: TCCTTGTATGAGGCACCAGCAGAGAGCCAGTCGTCC...TTTCTCCCATCTGGTCAGATGTCGAACACAAAATGTGGGCATTCTGCACGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp CTTCCGTGCAGAATGCCCACATTTTGTGTTCGACATCTGACCAGATGGGAGAAACTAATGTCCAAGGGCTaGAGCCCACTCAGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: LPCRMPTFCVRHLTRWEKLMSKG*SPLRGG
Trigger: ACCTCCTCTGAGTGGGCTGCAGCCCTTGGACATTAG...TTTCTCCCATCTGGTCAGATGTCGAACACAAAATGTGGGCATTCTGCACGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp GGATACACCAGCCTCCTGCCAGGTTCTGGAAGCTCACCTTATAATCTACCAGGACCTTCTCCCTGCTTCTaGTCTGGGTTTTTAGCACCA +
Preference number: 4 (lower is better)
Translates to: GYTSLLPGSGSSPYNLPGPSPCF*SGFLAP
Trigger: TGGTGCTAAAAACCCAGAGCAGAAGCAGGGAGAAGG...TCCTGGTAGATTATAAGGTGAGCTTCCAGAACCTGGCAGGAGGCTGGTGTATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp TGTGGTCAGGGTGTGTGGCTTTCTAGGCCATGGCCTGTCATCAAGCCAAACACATCACTCCCTTCTCCCTaGTTCTGCTCTGGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: CGQGVWLSRPWPVIKPNTSLPSP*FCSGFL
Trigger: TAAAAACCCAGAGCAGAAGCAGGGAGAAGGGAGTGA...TGTGTTTGGCTTGATGACAGGCCATGGCCTAGAAAGCCACACACCCTGACCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp TCAGACACAGGTCTGAAGAACTCTGGGGTCACCCTGGCAATGGTCCTGGACAACGTACTTAAGAAAGGCTaGACCTGCAATACCTGTACC +
Preference number: 4 (lower is better)
Translates to: SDTGLKNSGVTLAMVLDNVLKKG*TCNTCT
Trigger: GGTACAGGTATTGCAGGTGCAGCCTTTCTTAAGTAC...GTTGTCCAGGACCATTGCCAGGGTGACCCCAGAGTTCTTCAGACCTGTGTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp AGGGGCTTGCTAGGTTTCCCATCAAAGCACAAACCATGCTCCTGGTATGGGAAGGGGAAACCTCTCCATTaGGCAGAACTTTGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: RGLLGFPSKHKPCSWYGKGKPLH*AELCLS
Trigger: AGAGAGGCAAAGTTCTGCCCAATGGAGAGGTTTCCC...CTTCCCATACCAGGAGCATGGTTTGTGCTTTGATGGGAAACCTAGCAAGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp TCAGACACAGGTCTGAAGAACTCTGGGGTCACCCTGGCAATGGTCCTGGACAACCAGTCATCTTTAGCTTaGATTCGTCCTGGCTATCCT +
Preference number: 4 (lower is better)
Translates to: SDTGLKNSGVTLAMVLDNQSSLA*IRPGYP
Trigger: AGGATAGCCAGGACGAATCCAAGCTAAAGATGACTG...GTTGTCCAGGACCATTGCCAGGGTGACCCCAGAGTTCTTCAGACCTGTGTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp GTACTTAAGAAAGGCTGCACCTGCAATACCTGTACCTATGGCTGCCATATCATCGCTATGGCTGGGCTGTaGTCAGGGTGTGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: VLKKGCTCNTCTYGCHIIAMAGL*SGCVAF
Trigger: GAAAGCCACACACCCTGACCACAGCCCAGCCATAGC...GATGATATGGCAGCCATAGGTACAGGTATTGCAGGTGCAGCCTTTCTTAAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp CTTCTGCTCTGGGTTTTTAGCACCAGCTCTGAATGCCAAGACCACCCCCAAGTTTCCCTGCTTCTGCTCTaGGTTTTTAGCACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LLLWVFSTSSECQDHPQVSLLLL*VFSTSS
Trigger: AGAGCTGGTGCTAAAAACCCAGAGCAGAAGCAGGGA...AACTTGGGGGTGGTCTTGGCATTCAGAGCTGGTGCTAAAAACCCAGAGCAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp CTTTCTAGGCCATGGCCTGTCATCAAGCCAAACACATCATTCCTCATCCAGCCTTGTTCTGATCCCCAGTaGTCGCTCTTCTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: LSRPWPVIKPNTSFLIQPCSDPQ*SLFSVP
Trigger: TGGGACAGAGAAGAGCGACCACTGGGGATCAGAACA...AGGCTGGATGAGGAATGATGTGTTTGGCTTGATGACAGGCCATGGCCTAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp GGATACACCAGCCTCCTGCCAGGTTCTGGAAGCTCACCTTATAATCTACCAGGATACCCCAAACCATTCTaGGAACACTCAAAGGACCCC +
Preference number: 4 (lower is better)
Translates to: GYTSLLPGSGSSPYNLPGYPKPF*EHSKDP
Trigger: GGGGTCCTTTGAGTGTTCCCAGAATGGTTTGGGGTA...TCCTGGTAGATTATAAGGTGAGCTTCCAGAACCTGGCAGGAGGCTGGTGTATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp GGATACACCAGCCTCCTGCCAGGTTCTGGAAGCTCACCTTATAATCTACCAGGAACCATGCTCCTGGTATaGGAAGCTCAGATGAAGTGG +
Preference number: 4 (lower is better)
Translates to: GYTSLLPGSGSSPYNLPGTMLLV*EAQMKW
Trigger: CCACTTCATCTGAGCTTCCCATACCAGGAGCATGGT...TCCTGGTAGATTATAAGGTGAGCTTCCAGAACCTGGCAGGAGGCTGGTGTATCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp CTTCTGCTCTGGGTTTTTAGCACCAGCTCTGAATGCCAAGACCACCCCCAAGTTCAATACCTGTACCTATaGCTGCCATATCATCGGGCC +
Preference number: 4 (lower is better)
Translates to: LLLWVFSTSSECQDHPQVQYLYL*LPYHRA
Trigger: GGCCCGATGATATGGCAGCCATAGGTACAGGTATTG...AACTTGGGGGTGGTCTTGGCATTCAGAGCTGGTGCTAAAAACCCAGAGCAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp AGGGGCTTGCTAGGTTTCCCATCAAAGCACAAACCATGCTCCTGGTATGGGAAGTCCTGGACAACCTGGTaGGATCCTTTTGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: RGLLGFPSKHKPCSWYGKSWTTW*DPFAHP
Trigger: AGGATGAGCAAAAGGATCCCACCAGGTTGTCCAGGA...CTTCCCATACCAGGAGCATGGTTTGTGCTTTGATGGGAAACCTAGCAAGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CAA 72 bp AGCTCAGATGAAGTGGCTTGCTCCCAGGATGTGTGTTaGGGGACTCTATCCCTATCCTCAGCTCTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: SSDEVACSQDVC*GTLSLSSALVF
Trigger: AAACACCAGAGCTGAGGATAGGGATAGAGTCCCCAAACACACATCCTGGGAGCAAGCCACTTCATCTGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp GCCACCTTGTTCAAGAAAAAGAACGTTCTCCTCTTGCTGCAAAGAGCCCCAGAAGGCCCTGCAATTCACTaGGAAGACAGGACAAGCTCA +
Preference number: 4 (lower is better)
Translates to: ATLFKKKNVLLLLQRAPEGPAIH*EDRTSS
Trigger: TGAGCTTGTCCTGTCTTCTCAGTGAATTGCAGGGCC...TTCTGGGGCTCTTTGCAGCAAGAGGAGAACGTTCTTTTTCTTGAACAAGGTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp TATGTGCAGCATCTAAGACCAGACACCAGTCTCAGAGAGCCTCCCGAGGTAGCATTTGTGTTCGACATCTaGCCAGATGGGAGAAACCTT +
Preference number: 4 (lower is better)
Translates to: YVQHLRPDTSLREPPEVAFVFDI*PDGRNL
Trigger: AAGGTTTCTCCCATCTGGTCAGATGTCGAACACAAA...TGCTACCTCGGGAGGCTCTCTGAGACTGGTGTCTGGTCTTAGATGCTGCACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp CTTCTGCTCTGGGTTTTTAGCACCAGCTCTGAATGCCAAGACCACCCCCAAGTTTCCTTCCGTGCAGAATaGCCACATTTTGTGTTCGAC +
Preference number: 4 (lower is better)
Translates to: LLLWVFSTSSECQDHPQVSFRAE*PHFVFD
Trigger: GTCGAACACAAAATGTGGGCATTCTGCACGGAAGGA...AACTTGGGGGTGGTCTTGGCATTCAGAGCTGGTGCTAAAAACCCAGAGCAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp GGATACACCAGCCTCCTGCCAGGTTCTGGAAGCTCACCTTATAATCTACCAGGATCAGATGAAGTGGCTTaGTCCCAGGATGTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: GYTSLLPGSGSSPYNLPGSDEVA*SQDVCL
Trigger: CAAACACACATCCTGGGAGCAAGCCACTTCATCTGA...TCCTGGTAGATTATAAGGTGAGCTTCCAGAACCTGGCAGGAGGCTGGTGTATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp CTTTCTAGGCCATGGCCTGTCATCAAGCCAAACACATCATTCCTCATCCAGCCTTGGCTTTCTAGGCCATaGCCTGTCATCAAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: LSRPWPVIKPNTSFLIQPWLSRP*PVIKPN
Trigger: GTTTGGCTTGATGACAGGCCATGGCCTAGAAAGCCA...AGGCTGGATGAGGAATGATGTGTTTGGCTTGATGACAGGCCATGGCCTAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp AGGGGCTTGCTAGGTTTCCCATCAAAGCACAAACCATGCTCCTGGTATGGGAAGGTATCCCAGAGCTTATaGGTGGGAAGCCAAACAATG +
Preference number: 4 (lower is better)
Translates to: RGLLGFPSKHKPCSWYGKVSQSL*VGSQTM
Trigger: CATTGTTTGGCTTCCCACCCATAAGCTCTGGGATAC...CTTCCCATACCAGGAGCATGGTTTGTGCTTTGATGGGAAACCTAGCAAGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp TATGTGCAGCATCTAAGACCAGACACCAGTCTCAGAGAGCCTCCCGAGGTAGCACCCAACTTCCTTATGTaGACAGAGAAGATAGGTCCT +
Preference number: 4 (lower is better)
Translates to: YVQHLRPDTSLREPPEVAPNFLM*TEKIGP
Trigger: AGGACCTATCTTCTCTGTCCACATAAGGAAGTTGGG...TGCTACCTCGGGAGGCTCTCTGAGACTGGTGTCTGGTCTTAGATGCTGCACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp CATACATGTATGTCTTCCATATCAGCCACATACACAACATTCAGATACACTTCCGACAGCAGGTCTGGGTaGGGGCCCTCATTGTCGAGG +
Preference number: 4 (lower is better)
Translates to: HTCMSSISATYTTFRYTSDSRSG*GPSLSR
Trigger: CCTCGACAATGAGGGCCCTCACCCAGACCTGCTGTC...GGAAGTGTATCTGAATGTTGTGTATGTGGCTGATATGGAAGACATACATGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp GGATACACCAGCCTCCTGCCAGGTTCTGGAAGCTCACCTTATAATCTACCAGGACATTGGGCAGAACTTTaGCTCTCTCTTCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: GYTSLLPGSGSSPYNLPGHWAEL*LSLLFP
Trigger: TGGAAAGAGAAGAGAGAGGCAAAGTTCTGCCCAATG...TCCTGGTAGATTATAAGGTGAGCTTCCAGAACCTGGCAGGAGGCTGGTGTATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp CTTTCTAGGCCATGGCCTGTCATCAAGCCAAACACATCATTCCTCATCCAGCCTAAGAAAGGCTGCACCTaGAATACCTGTACCTATGGC +
Preference number: 4 (lower is better)
Translates to: LSRPWPVIKPNTSFLIQPKKGCT*NTCTYG
Trigger: GCCATAGGTACAGGTATTGCAGGTGCAGCCTTTCTT...AGGCTGGATGAGGAATGATGTGTTTGGCTTGATGACAGGCCATGGCCTAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp CTTCTGCTCTGGGTTTTTAGCACCAGCTCTGAATGCCAAGACCACCCCCAAGTTGGTCAGTCCCTTACATaGATCCTGAAGCAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: LLLWVFSTSSECQDHPQVGQSLT*ILKQEK
Trigger: TTTTTCCTGCTTCAGGATCCATGTAAGGGACTGACC...AACTTGGGGGTGGTCTTGGCATTCAGAGCTGGTGCTAAAAACCCAGAGCAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CAA 72 bp AGCCTGATCTTTCCTTCCGTGCAGAATGCCCACATTTaGTGTTCGACATCTGACCAGATGGGAGAAACCTTG +
Preference number: 4 (lower is better)
Translates to: SLIFPSVQNAHI*CSTSDQMGETL
Trigger: CAAGGTTTCTCCCATCTGGTCAGATGTCGAACACAAAATGTGGGCATTCTGCACGGAAGGAAAGATCAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp CTTCCGTGCAGAATGCCCACATTTTGTGTTCGACATCTGACCAGATGGGAGAAACTCTGGTGTTTTGTGTaGTACCCCAAACCATTCTGG +
Preference number: 4 (lower is better)
Translates to: LPCRMPTFCVRHLTRWEKLWCFV*YPKPFW
Trigger: CCAGAATGGTTTGGGGTATCACACAAAACACCAGAG...TTTCTCCCATCTGGTCAGATGTCGAACACAAAATGTGGGCATTCTGCACGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp GTACTTAAGAAAGGCTGCACCTGCAATACCTGTACCTATGGCTGCCATATCATCGACATGGAAACCAGGTaGGGCTTTGGATGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: VLKKGCTCNTCTYGCHIIDMETR*GFGWKA
Trigger: AGCTTTCCATCCAAAGCCTCACCTGGTTTCCATGTC...GATGATATGGCAGCCATAGGTACAGGTATTGCAGGTGCAGCCTTTCTTAAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp CATACATGTATGTCTTCCATATCAGCCACATACACAACATTCAGATACACTTCCCACTCTACCAGGGCCTaGAGGTGCCCTACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: HTCMSSISATYTTFRYTSHSTRA*RCPTAV
Trigger: CACTGCAGTAGGGCACCTGCAGGCCCTGGTAGAGTG...GGAAGTGTATCTGAATGTTGTGTATGTGGCTGATATGGAAGACATACATGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp AGTCCTTCAGCCATTCTGCGGATAGACTCTTTAACTAGAACTACTCAAGGACTTGGATTACTGAGGGTGTaGCTGCCAGGCTACAGTCAC +
Preference number: 4 (lower is better)
Translates to: SPSAILRIDSLTRTTQGLGLLRV*LPGYSH
Trigger: GTGACTGTAGCCTGGCAGCCACACCCTCAGTAATCC...AAGTCCTTGAGTAGTTCTAGTTAAAGAGTCTATCCGCAGAATGGCTGAAGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp CATTCCCAGCCTTCTCCCAGGGAACCGGCCACCTTGTTCAAGAAAAAGAACGTTTTCCAATCTTGTACATaGTTCATTCTGGCTCTCACA +
Preference number: 4 (lower is better)
Translates to: HSQPSPREPATLFKKKNVFQSCT*FILALT
Trigger: TGTGAGAGCCAGAATGAAGCATGTACAAGATTGGAA...AACGTTCTTTTTCTTGAACAAGGTGGCCGGTTCCCTGGGAGAAGGCTGGGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp AGTCCTTCAGCCATTCTGCGGATAGACTCTTTAACTAGAACTACTCAAGGACTTCGACTGGCTCTCTGCTaGTGCCTCATACAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SPSAILRIDSLTRTTQGLRLALC*CLIQGR
Trigger: TCTTCCTTGTATGAGGCACCAGCAGAGAGCCAGTCG...AAGTCCTTGAGTAGTTCTAGTTAAAGAGTCTATCCGCAGAATGGCTGAAGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp AGTCCTTCAGCCATTCTGCGGATAGACTCTTTAACTAGAACTACTCAAGGACTTAACCAGGTGAGGCTTTaGATGGAAAGCTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SPSAILRIDSLTRTTQGLNQVRL*MESWSG
Trigger: CCCAGACCAGCTTTCCATCCAAAGCCTCACCTGGTT...AAGTCCTTGAGTAGTTCTAGTTAAAGAGTCTATCCGCAGAATGGCTGAAGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CAA 72 bp TTTGGGGACTCTATCCCTATCCTCAGCTCTGGTGTTTaGTGTGATACCCCAAACCATTCTGGGAACACTCAA +
Preference number: 4 (lower is better)
Translates to: FGDSIPILSSGV*CDTPNHSGNTQ
Trigger: TTGAGTGTTCCCAGAATGGTTTGGGGTATCACACAAAACACCAGAGCTGAGGATAGGGATAGAGTCCCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp CATACATGTATGTCTTCCATATCAGCCACATACACAACATTCAGATACACTTCCGAAATCAGCATGTCCTaGGTGGTCTTCAGGGCCCGA +
Preference number: 4 (lower is better)
Translates to: HTCMSSISATYTTFRYTSEISMS*VVFRAR
Trigger: TCGGGCCCTGAAGACCACCCAGGACATGCTGATTTC...GGAAGTGTATCTGAATGTTGTGTATGTGGCTGATATGGAAGACATACATGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp GATAAAAGACCTTGTGGTCCCAACTTCCTTATGTGGACAGAGAAGATAGGTCCTAGCTTGGATTCGTCCTaGCTATCCTTGTGGATTAGG +
Preference number: 4 (lower is better)
Translates to: DKRPCGPNFLMWTEKIGPSLDSS*LSLWIR
Trigger: CCTAATCCACAAGGATAGCCAGGACGAATCCAAGCT...AGGACCTATCTTCTCTGTCCACATAAGGAAGTTGGGACCACAAGGTCTTTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp CATACATGTATGTCTTCCATATCAGCCACATACACAACATTCAGATACACTTCCAAGCTGGACTCACTGTaGGGGATTACTGAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: HTCMSSISATYTTFRYTSKLDSL*GITEGV
Trigger: CACACCCTCAGTAATCCCGCACAGTGAGTCCAGCTT...GGAAGTGTATCTGAATGTTGTGTATGTGGCTGATATGGAAGACATACATGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp AGTCCTTCAGCCATTCTGCGGATAGACTCTTTAACTAGAACTACTCAAGGACTTCTGTTGAGATGGACATaGAAACCAGGTGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SPSAILRIDSLTRTTQGLLLRWT*KPGEAL
Trigger: CAAAGCCTCACCTGGTTTCCATGTCCATCTCAACAG...AAGTCCTTGAGTAGTTCTAGTTAAAGAGTCTATCCGCAGAATGGCTGAAGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp CATACATGTATGTCTTCCATATCAGCCACATACACAACATTCAGATACACTTCCTGCCGTGGTCAACTATaGACAAAGAGGCGACAGAGA +
Preference number: 4 (lower is better)
Translates to: HTCMSSISATYTTFRYTSCRGQL*TKRRQR
Trigger: TCTCTGTCGCCTCTTTGTTCATAGTTGACCACGGCA...GGAAGTGTATCTGAATGTTGTGTATGTGGCTGATATGGAAGACATACATGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR TCA 90 bp CATACATGTATGTCTTCCATATCAGCCACATACACAACATTCAGATACACTTCCTGGGAAGCCAAACAATaGATAGAACAGGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: HTCMSSISATYTTFRYTSWEAKQ*IEQGRP
Trigger: TGGCCTCCCCTGTTCTATTCATTGTTTGGCTTCCCA...GGAAGTGTATCTGAATGTTGTGTATGTGGCTGATATGGAAGACATACATGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CCA 90 bp GTACTTAAGAAAGGCTGCACCTGCAATACCTGTACCTATGGCTGCCATATCATCTTCTCAAACATGCCGTaGTCAACTATGAACAAAGAG +
Preference number: 4 (lower is better)
Translates to: VLKKGCTCNTCTYGCHIIFSNMP*STMNKE
Trigger: CTCTTTGTTCATAGTTGACCACGGCATGTTTGAGAA...GATGATATGGCAGCCATAGGTACAGGTATTGCAGGTGCAGCCTTTCTTAAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR GCA 90 bp CATACATGTATGTCTTCCATATCAGCCACATACACAACATTCAGATACACTTCCGACCTAAAAGTGGGTTaGAGGAACCAGTTAAGGCTG +
Preference number: 4 (lower is better)
Translates to: HTCMSSISATYTTFRYTSDLKVG*RNQLRL
Trigger: CAGCCTTAACTGGTTCCTGCAACCCACTTTTAGGTC...GGAAGTGTATCTGAATGTTGTGTATGTGGCTGATATGGAAGACATACATGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
3UTR CAA 72 bp AACTGGAGCCAATCTTCTTCTTTAAACGCTGATGGATaGCATACATGTATGTCTTCCATATCAGCCACATAC +
Preference number: 4 (lower is better)
Translates to: NWSQSSSLNADG*HTCMSSISATY
Trigger: GTATGTGGCTGATATGGAAGACATACATGTATGCAATCCATCAGCGTTTAAAGAAGAAGATTGGCTCCAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS CCA 90 bp TGGCCTCTGGCTGTGAAGCGTCTGCTGGGACGTCAGGCTGGGCAGTaGGAGCGGAGTCCTGGGCCTGCCCAGGTGATGGCTCTGTCCCAT +
Preference number: 5 (lower is better)
Translates to: WPLAVKRLLGRQAGQ*ERSPGPAQVMALSH
Trigger: ATGGGACAGAGCCATCACCTGGGCAGGCCCAGGACTCCGCTCCCACTGCCCAGCCTGACGTCCCAGCAGACGCTTCACAGCCAGAGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426197.2
ENST00000458626.4
CDS GCA 90 bp CCAAGCCTCTGGAGCCGCGTCAGTCCCACTGGCCAGCTGTGCTCCTaGAGTCTTGTTGATCTCTGTCACACCCACACTGCCCAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: PSLWSRVSPTGQLCS*SLVDLCHTHTAQAG
Trigger: TCCAGCCTGGGCAGTGTGGGTGTGACAGAGATCAACAAGACTGCAGGAGCACAGCTGGCCAGTGGGACTGACGCGGCTCCAGAGGCTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426197.2
ENST00000458626.4
CDS-3UTR CAA 90 bp TATGTGCAGCATCTAAGACCAGACACCAGTCTCAGAGAGCCTCCCGAGGTAGCACCGGGGGCCACGGGCTaGGACAAGTGGGGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: YVQHLRPDTSLREPPEVAPGATG*DKWGKE
Trigger: CTCCTTCCCCCACTTGTCCAAGCCCGTGGCCCCCGG...TGCTACCTCGGGAGGCTCTCTGAGACTGGTGTCTGGTCTTAGATGCTGCACATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS CCA 90 bp GCTCAGCAGGAAAGAGCAGAGGCTCTATTCAAAGGACAGCAGGTCTaGGTGAGGGCCCTCATTGTCGAGGCTGGAGGTCCGTGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: AQQERAEALFKGQQV*VRALIVEAGGPCLR
Trigger: CCTCAGGCACGGACCTCCAGCCTCGACAATGAGGGCCCTCACCCAGACCTGCTGTCCTTTGAATAGAGCCTCTGCTCTTTCCTGCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426197.2
ENST00000458626.4
CDS-3UTR CAA 90 bp TGTACCTATGGCTGCCATATCATCGGGCCAGAGCCGCCCTGGGCTCCAGGAGAGGCTCCTGCAGTCTTGTaGATCTCTGTCACACCCACA +
Preference number: 5 (lower is better)
Translates to: CTYGCHIIGPEPPWAPGEAPAVL*ISVTPT
Trigger: TGTGGGTGTGACAGAGATCAACAAGACTGCAGGAGC...CTCTCCTGGAGCCCAGGGCGGCTCTGGCCCGATGATATGGCAGCCATAGGTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CAA 90 bp TGTACCTATGGCTGCCATATCATCGGGCCAGAGCCGCCCTGGGCTCCAGGAGAGTCCCAGGATGTGTGTTaGGGGACTCTATCCCTATCC +
Preference number: 5 (lower is better)
Translates to: CTYGCHIIGPEPPWAPGESQDVC*GTLSLS
Trigger: GGATAGGGATAGAGTCCCCAAACACACATCCTGGGA...CTCTCCTGGAGCCCAGGGCGGCTCTGGCCCGATGATATGGCAGCCATAGGTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS TCA 90 bp CCTGGGCCTGCCCAGGTGATGGCTCTGTCCCATACTCCAGACTGCTaGGGACAGGCTGTGATGAAATCAGCATGTCCTGGGTGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: PGPAQVMALSHTPDC*GQAVMKSACPGWSS
Trigger: TGAAGACCACCCAGGACATGCTGATTTCATCACAGCCTGTCCTCAGCAGTCTGGAGTATGGGACAGAGCCATCACCTGGGCAGGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426197.2
ENST00000458626.4
CDS CCA 90 bp TGTCCTGGGTGGTCTTCAGGGCCCGAGGGGTTCGCTTTCTGGTTATaGGAGGTGGAGGATCCAGCCGAGGAAATGTTTCTTGCAGGACTG +
Preference number: 5 (lower is better)
Translates to: CPGWSSGPEGFAFWL*EVEDPAEEMFLAGL
Trigger: CAGTCCTGCAAGAAACATTTCCTCGGCTGGATCCTCCACCTCCCATAACCAGAAAGCGAACCCCTCGGGCCCTGAAGACCACCCAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426197.2
ENST00000458626.4
CDS CCA 90 bp TCAGCATGTCCTGGGTGGTCTTCAGGGCCCGAGGGGTTCGCTTTCTaGTTATGGGAGGTGGAGGATCCAGCCGAGGAAATGTTTCTTGCA +
Preference number: 5 (lower is better)
Translates to: SACPGWSSGPEGFAF*LWEVEDPAEEMFLA
Trigger: TGCAAGAAACATTTCCTCGGCTGGATCCTCCACCTCCCATAACCAGAAAGCGAACCCCTCGGGCCCTGAAGACCACCCAGGACATGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426197.2
ENST00000458626.4
CDS-3UTR CAA 90 bp CCAGGGGCAGAGCAAACATGGCAACCAGGGGCCTGCACTGTCCTGGGACCAAGAAGACCTAAAAGTGGGTaGCAGGAACCAGTTAAGGCT +
Preference number: 5 (lower is better)
Translates to: PGAEQTWQPGACTVLGPRRPKSG*QEPVKA
Trigger: AGCCTTAACTGGTTCCTGCAACCCACTTTTAGGTCT...TCTTGGTCCCAGGACAGTGCAGGCCCCTGGTTGCCATGTTTGCTCTGCCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CAA 90 bp TCAGATACACTTCCCTCTGTGCAGGGGGATACACCAGCCTCCTGCCAGGTTCTGCCTGGTGGGATCCTTTaGCTCATCCTGGGTCTAAGG +
Preference number: 5 (lower is better)
Translates to: SDTLPSVQGDTPASCQVLPGGIL*LILGLR
Trigger: CCTTAGACCCAGGATGAGCAAAAGGATCCCACCAGG...CAGAACCTGGCAGGAGGCTGGTGTATCCCCCTGCACAGAGGGAAGTGTATCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CAA 90 bp GCCACCTTGTTCAAGAAAAAGAACGTTCTCCTCTTGCTGCAAAGAGCCCCAGAAAAGGGCACAGCGGAGTaGAGGCCAGGGCCAGTGTGC +
Preference number: 5 (lower is better)
Translates to: ATLFKKKNVLLLLQRAPEKGTAE*RPGPVC
Trigger: GCACACTGGCCCTGGCCTCAACTCCGCTGTGCCCTT...TTCTGGGGCTCTTTGCAGCAAGAGGAGAACGTTCTTTTTCTTGAACAAGGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CAA 90 bp CTTCCGTGCAGAATGCCCACATTTTGTGTTCGACATCTGACCAGATGGGAGAAAGCTTTGCCCAGGTTCTaGAGGTGCTGGCTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: LPCRMPTFCVRHLTRWEKALPRF*RCWLLP
Trigger: GGGCAGCAGCCAGCACCTCAAGAACCTGGGCAAAGC...TTTCTCCCATCTGGTCAGATGTCGAACACAAAATGTGGGCATTCTGCACGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CAA 90 bp TCAGACACAGGTCTGAAGAACTCTGGGGTCACCCTGGCAATGGTCCTGGACAACTGTGCTCCTGCAGTCTaGTTGATCTCTGTCACACCC +
Preference number: 5 (lower is better)
Translates to: SDTGLKNSGVTLAMVLDNCAPAV*LISVTP
Trigger: GGGTGTGACAGAGATCAACAAGACTGCAGGAGCACA...GTTGTCCAGGACCATTGCCAGGGTGACCCCAGAGTTCTTCAGACCTGTGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CAA 90 bp CTTTCTAGGCCATGGCCTGTCATCAAGCCAAACACATCATTCCTCATCCAGCCTCAGATGGGAGAAACCTaGGGAACCCTGGGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: LSRPWPVIKPNTSFLIQPQMGET*GTLGGS
Trigger: GCTGCCACCCAGGGTTCCCAAGGTTTCTCCCATCTG...AGGCTGGATGAGGAATGATGTGTTTGGCTTGATGACAGGCCATGGCCTAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CAA 90 bp GATGGACATGGAAACCAGGTGAGGCTTTGGATGGAAAGCTGGTCTGGGCCAAGGCCATTGGGCAGAACTTaGCCTCTCTCTTCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: DGHGNQVRLWMESWSGPRPLGRT*PLSSLS
Trigger: GGAAAGAGAAGAGAGAGGCAAAGTTCTGCCCAATGG...CCTTGGCCCAGACCAGCTTTCCATCCAAAGCCTCACCTGGTTTCCATGTCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CAA 90 bp TTGGGAACCCTGGGTGGCAGCGTTCAAACCCTGGGTGAACTCTCAAGGTCTCAGTCAGTCATCTTTAGCTaGGATTCGTCCTGGCTATCC +
Preference number: 5 (lower is better)
Translates to: LGTLGGSVQTLGELSRSQSVIFS*DSSWLS
Trigger: GGATAGCCAGGACGAATCCAAGCTAAAGATGACTGA...CTGAGACCTTGAGAGTTCACCCAGGGTTTGAACGCTGCCACCCAGGGTTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CAA 90 bp GATGGACATGGAAACCAGGTGAGGCTTTGGATGGAAAGCTGGTCTGGGCCAAGGGGGCTCAAGCTGAGTTaGAAGCCATTCCTCTCGATA +
Preference number: 5 (lower is better)
Translates to: DGHGNQVRLWMESWSGPRGLKLS*KPFLSI
Trigger: TATCGAGAGGAATGGCTTCAAACTCAGCTTGAGCCC...CCTTGGCCCAGACCAGCTTTCCATCCAAAGCCTCACCTGGTTTCCATGTCCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CAA 90 bp GGACAACCTGGTGGGATCCTTTTGCTCATCCTGGGTCTAAGGTCCTGGACTCCAGAGGTTATGGTGGGGTaGGGGAGTAACAAGGAGATA +
Preference number: 5 (lower is better)
Translates to: GQPGGILLLILGLRSWTPEVMVG*GSNKEI
Trigger: TATCTCCTTGTTACTCCCCAACCCCACCATAACCTC...TGGAGTCCAGGACCTTAGACCCAGGATGAGCAAAAGGATCCCACCAGGTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CAA 90 bp TGTGGTCAGGGTGTGTGGCTTTCTAGGCCATGGCCTGTCATCAAGCCAAACACATCGTCCTGGCTATCCTaGTGGATTAGGTCAGGTACT +
Preference number: 5 (lower is better)
Translates to: CGQGVWLSRPWPVIKPNTSSWLS*WIRSGT
Trigger: AGTACCTGACCTAATCCACAAGGATAGCCAGGACGA...TGTGTTTGGCTTGATGACAGGCCATGGCCTAGAAAGCCACACACCCTGACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CAA 90 bp GGACAACCTGGTGGGATCCTTTTGCTCATCCTGGGTCTAAGGTCCTGGACTCCACAGAATGCCCACATTTaGTGTTCGACATCTGACCAG +
Preference number: 5 (lower is better)
Translates to: GQPGGILLLILGLRSWTPQNAHI*CSTSDQ
Trigger: CTGGTCAGATGTCGAACACAAAATGTGGGCATTCTG...TGGAGTCCAGGACCTTAGACCCAGGATGAGCAAAAGGATCCCACCAGGTTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CAA 90 bp TATGTGCAGCATCTAAGACCAGACACCAGTCTCAGAGAGCCTCCCGAGGTAGCAAAGAACGTTCTCCTCTaGCTGCAAAGAGCCCCAGAA +
Preference number: 5 (lower is better)
Translates to: YVQHLRPDTSLREPPEVAKNVLL*LQRAPE
Trigger: TTCTGGGGCTCTTTGCAGCAAGAGGAGAACGTTCTT...TGCTACCTCGGGAGGCTCTCTGAGACTGGTGTCTGGTCTTAGATGCTGCACATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS CCA 90 bp GAGGAGGCCCTTCTGCACTCAGTCATCTTTAGCTTGGATTCGTCCTaGCTATCCTTGTGGATTAGGTCAGGTACTGACAGGGAAACCTCT +
Preference number: 5 (lower is better)
Translates to: EEALLHSVIFSLDSS*LSLWIRSGTDRETS
Trigger: AGAGGTTTCCCTGTCAGTACCTGACCTAATCCACAAGGATAGCCAGGACGAATCCAAGCTAAAGATGACTGAGTGCAGAAGGGCCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426197.2
ENST00000458626.4
CDS-3UTR CAA 90 bp AGGCCGCATCTGCTGGGGCCTGGCTCTCCCTGTCTTCACACACTCAGCAAGAGAGTAACTTCCAAGGCTTaGGAAATATTCAAGAAAGAG +
Preference number: 5 (lower is better)
Translates to: RPHLLGPGSPCLHTLSKRVTSKA*EIFKKE
Trigger: CTCTTTCTTGAATATTTCCAAAGCCTTGGAAGTTAC...TCTCTTGCTGAGTGTGTGAAGACAGGGAGAGCCAGGCCCCAGCAGATGCGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CAA 90 bp TATGTGCAGCATCTAAGACCAGACACCAGTCTCAGAGAGCCTCCCGAGGTAGCAAGGGAACCGGCCACCTaGTTCAAGAAAAAGAACGTT +
Preference number: 5 (lower is better)
Translates to: YVQHLRPDTSLREPPEVAREPAT*FKKKNV
Trigger: AACGTTCTTTTTCTTGAACAAGGTGGCCGGTTCCCT...TGCTACCTCGGGAGGCTCTCTGAGACTGGTGTCTGGTCTTAGATGCTGCACATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CAA 90 bp TGTGGTCAGGGTGTGTGGCTTTCTAGGCCATGGCCTGTCATCAAGCCAAACACACTCAGCTCTGGTGTTTaGTGTGATACCCCAAACCAT +
Preference number: 5 (lower is better)
Translates to: CGQGVWLSRPWPVIKPNTLSSGV*CDTPNH
Trigger: ATGGTTTGGGGTATCACACAAAACACCAGAGCTGAG...TGTGTTTGGCTTGATGACAGGCCATGGCCTAGAAAGCCACACACCCTGACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CAA 90 bp CTTCCGTGCAGAATGCCCACATTTTGTGTTCGACATCTGACCAGATGGGAGAAACCAGAGTGCAGGGGCTaGCTAGGTTTCCCATCAAAG +
Preference number: 5 (lower is better)
Translates to: LPCRMPTFCVRHLTRWEKPECRG*LGFPSK
Trigger: CTTTGATGGGAAACCTAGCAAGCCCCTGCACTCTGG...TTTCTCCCATCTGGTCAGATGTCGAACACAAAATGTGGGCATTCTGCACGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CAA 90 bp GGACAACCTGGTGGGATCCTTTTGCTCATCCTGGGTCTAAGGTCCTGGACTCCATCTCACATTCCAATCTaGTACATGCTTCATTCTGGC +
Preference number: 5 (lower is better)
Translates to: GQPGGILLLILGLRSWTPSHIPI*YMLHSG
Trigger: GCCAGAATGAAGCATGTACAAGATTGGAATGTGAGA...TGGAGTCCAGGACCTTAGACCCAGGATGAGCAAAAGGATCCCACCAGGTTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CAA 90 bp GTACTTAAGAAAGGCTGCACCTGCAATACCTGTACCTATGGCTGCCATATCATCAAACCAGGTGAGGCTTaGGATGGAAAGCTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: VLKKGCTCNTCTYGCHIIKPGEA*DGKLVW
Trigger: CCAGACCAGCTTTCCATCCAAAGCCTCACCTGGTTT...GATGATATGGCAGCCATAGGTACAGGTATTGCAGGTGCAGCCTTTCTTAAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CAA 90 bp GATAAAAGACCTTGTGGTCCCAACTTCCTTATGTGGACAGAGAAGATAGGTCCTAGGAAGGCCAGACTGTaGAGATGGACATGGAAACCA +
Preference number: 5 (lower is better)
Translates to: DKRPCGPNFLMWTEKIGPRKARL*RWTWKP
Trigger: TGGTTTCCATGTCCATCTCAACAGTCTGGCCTTCCT...AGGACCTATCTTCTCTGTCCACATAAGGAAGTTGGGACCACAAGGTCTTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CAA 90 bp CATACATGTATGTCTTCCATATCAGCCACATACACAACATTCAGATACACTTCCAGGGAAACCTCTCCATaGGGCAGAACTTTGCCTCTC +
Preference number: 5 (lower is better)
Translates to: HTCMSSISATYTTFRYTSRETSP*GRTLPL
Trigger: GAGAGGCAAAGTTCTGCCCAATGGAGAGGTTTCCCT...GGAAGTGTATCTGAATGTTGTGTATGTGGCTGATATGGAAGACATACATGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS-3UTR CAA 90 bp CTTCCGTGCAGAATGCCCACATTTTGTGTTCGACATCTGACCAGATGGGAGAAATTAAACGCTGATGGATaGCATACATGTATGTCTTCC +
Preference number: 5 (lower is better)
Translates to: LPCRMPTFCVRHLTRWEKLNADG*HTCMSS
Trigger: GGAAGACATACATGTATGCAATCCATCAGCGTTTAA...TTTCTCCCATCTGGTCAGATGTCGAACACAAAATGTGGGCATTCTGCACGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458626.4
CDS CCA 72 bp GCTGTGAAGCGTCTGCTGGGACGTCAGGCTGGGCAGTaGGAGCGGAGTCCTGGGCCTGCCCAGGTGATGGCT +
Preference number: 6 (lower is better)
Translates to: AVKRLLGRQAGQ*ERSPGPAQVMA
Trigger: AGCCATCACCTGGGCAGGCCCAGGACTCCGCTCCCACTGCCCAGCCTGACGTCCCAGCAGACGCTTCACAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426197.2
ENST00000458626.4
CDS TCA 72 bp GAGCAGAGGCTCTATTCAAAGGACAGCAGGTCTGGGTaGGGGCCCTCATTGTCGAGGCTGGAGGTCCGTGCC +
Preference number: 6 (lower is better)
Translates to: EQRLYSKDSRSG*GPSLSRLEVRA
Trigger: GGCACGGACCTCCAGCCTCGACAATGAGGGCCCTCACCCAGACCTGCTGTCCTTTGAATAGAGCCTCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426197.2
ENST00000458626.4
CDS GCA 72 bp TGGAGCCGCGTCAGTCCCACTGGCCAGCTGTGCTCCTaGAGTCTTGTTGATCTCTGTCACACCCACACTGCC +
Preference number: 6 (lower is better)
Translates to: WSRVSPTGQLCS*SLVDLCHTHTA
Trigger: GGCAGTGTGGGTGTGACAGAGATCAACAAGACTGCAGGAGCACAGCTGGCCAGTGGGACTGACGCGGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426197.2
ENST00000458626.4
CDS CCA 72 bp CCTGGGTGGTCTTCAGGGCCCGAGGGGTTCGCTTTCTaGTTATGGGAGGTGGAGGATCCAGCCGAGGAAATG +
Preference number: 6 (lower is better)
Translates to: PGWSSGPEGFAF*LWEVEDPAEEM
Trigger: CATTTCCTCGGCTGGATCCTCCACCTCCCATAACCAGAAAGCGAACCCCTCGGGCCCTGAAGACCACCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426197.2
ENST00000458626.4
CDS CAA 72 bp CTCCTCAGGAAGTCATTCACTTTGGCCCCCATGGCTTaGCCCAGGTTCTTGAGGTGCTGGCTGCTGCCCACC +
Preference number: 6 (lower is better)
Translates to: LLRKSFTLAPMA*PRFLRCWLLPT
Trigger: GGTGGGCAGCAGCCAGCACCTCAAGAACCTGGGCAAAGCCATGGGGGCCAAAGTGAATGACTTCCTGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426197.2
ENST00000458626.4
CDS CAA 90 bp GGCTCCTTTCTCCTCAGGAAGTCATTCACTTTGGCCCCCATGGCTTaGCCCAGGTTCTTGAGGTGCTGGCTGCTGCCCACCCAGAGTCCT +
Preference number: 6 (lower is better)
Translates to: GSFLLRKSFTLAPMA*PRFLRCWLLPTQSP
Trigger: AGGACTCTGGGTGGGCAGCAGCCAGCACCTCAAGAACCTGGGCAAAGCCATGGGGGCCAAAGTGAATGACTTCCTGAGGAGAAAGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426197.2
ENST00000458626.4
CDS CCA 72 bp GAAAGAGCAGAGGCTCTATTCAAAGGACAGCAGGTCTaGGTGAGGGCCCTCATTGTCGAGGCTGGAGGTCCG +
Preference number: 6 (lower is better)
Translates to: ERAEALFKGQQV*VRALIVEAGGP
Trigger: CGGACCTCCAGCCTCGACAATGAGGGCCCTCACCCAGACCTGCTGTCCTTTGAATAGAGCCTCTGCTCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426197.2
ENST00000458626.4
CDS CAA 72 bp CAGGACTCAGCCAGGCTGATGGGGCTCAAGCTGAGTTaGAAGCCATTCCTCTCGATAAGGCTGGGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: QDSARLMGLKLS*KPFLSIRLGEE
Trigger: CTCCTCCCCCAGCCTTATCGAGAGGAATGGCTTCAAACTCAGCTTGAGCCCCATCAGCCTGGCTGAGTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426197.2
ENST00000458626.4
CDS TCA 72 bp GCCCAGGTGATGGCTCTGTCCCATACTCCAGACTGCTaGGGACAGGCTGTGATGAAATCAGCATGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: AQVMALSHTPDC*GQAVMKSACPG
Trigger: CCCAGGACATGCTGATTTCATCACAGCCTGTCCTCAGCAGTCTGGAGTATGGGACAGAGCCATCACCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426197.2
ENST00000458626.4
CDS CCA 72 bp TGGTCTTCAGGGCCCGAGGGGTTCGCTTTCTGGTTATaGGAGGTGGAGGATCCAGCCGAGGAAATGTTTCTT +
Preference number: 6 (lower is better)
Translates to: WSSGPEGFAFWL*EVEDPAEEMFL
Trigger: AAGAAACATTTCCTCGGCTGGATCCTCCACCTCCCATAACCAGAAAGCGAACCCCTCGGGCCCTGAAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426197.2
ENST00000458626.4
CDS CCA 72 bp GGGAGGAGGCCCTTCTGCACTCAGTCATCTTTAGCTTaGATTCGTCCTGGCTATCCTTGTGGATTAGGTCAG +
Preference number: 6 (lower is better)
Translates to: GRRPFCTQSSLA*IRPGYPCGLGQ
Trigger: CTGACCTAATCCACAAGGATAGCCAGGACGAATCCAAGCTAAAGATGACTGAGTGCAGAAGGGCCTCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426197.2
ENST00000458626.4
CDS CAA 72 bp GGGGAGGAGGCCCTTCTGCACTCAGTCATCTTTAGCTaGGATTCGTCCTGGCTATCCTTGTGGATTAGGTCA +
Preference number: 6 (lower is better)
Translates to: GEEALLHSVIFS*DSSWLSLWIRS
Trigger: TGACCTAATCCACAAGGATAGCCAGGACGAATCCAAGCTAAAGATGACTGAGTGCAGAAGGGCCTCCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426197.2
ENST00000458626.4
CDS CAA 90 bp ATTAGGTCAGGTACTGACAGGGAAACCTCTCCATTGGGCAGAACTTaGCCTCTCTCTTCTCTTTCCATGGTGGCCTCTGGCTGTGAAGCG +
Preference number: 6 (lower is better)
Translates to: IRSGTDRETSPLGRT*PLSSLSMVASGCEA
Trigger: CGCTTCACAGCCAGAGGCCACCATGGAAAGAGAAGAGAGAGGCAAAGTTCTGCCCAATGGAGAGGTTTCCCTGTCAGTACCTGACCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426197.2
ENST00000458626.4
CDS CAA 90 bp ATAAGGCTGGGGGAGGAGGCCCTTCTGCACTCAGTCATCTTTAGCTaGGATTCGTCCTGGCTATCCTTGTGGATTAGGTCAGGTACTGAC +
Preference number: 6 (lower is better)
Translates to: IRLGEEALLHSVIFS*DSSWLSLWIRSGTD
Trigger: GTCAGTACCTGACCTAATCCACAAGGATAGCCAGGACGAATCCAAGCTAAAGATGACTGAGTGCAGAAGGGCCTCCTCCCCCAGCCTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426197.2
ENST00000458626.4
CDS CAA 90 bp CTTCTGCACTCAGTCATCTTTAGCTTGGATTCGTCCTGGCTATCCTaGTGGATTAGGTCAGGTACTGACAGGGAAACCTCTCCATTGGGC +
Preference number: 6 (lower is better)
Translates to: LLHSVIFSLDSSWLS*WIRSGTDRETSPLG
Trigger: GCCCAATGGAGAGGTTTCCCTGTCAGTACCTGACCTAATCCACAAGGATAGCCAGGACGAATCCAAGCTAAAGATGACTGAGTGCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426197.2
ENST00000458626.4
CDS CCA 72 bp CTTCTGCACTCAGTCATCTTTAGCTTGGATTCGTCCTaGCTATCCTTGTGGATTAGGTCAGGTACTGACAGG +
Preference number: 6 (lower is better)
Translates to: LLHSVIFSLDSS*LSLWIRSGTDR
Trigger: CCTGTCAGTACCTGACCTAATCCACAAGGATAGCCAGGACGAATCCAAGCTAAAGATGACTGAGTGCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426197.2
ENST00000458626.4
CDS CAA 72 bp TCAGTCATCTTTAGCTTGGATTCGTCCTGGCTATCCTaGTGGATTAGGTCAGGTACTGACAGGGAAACCTCT +
Preference number: 6 (lower is better)
Translates to: SVIFSLDSSWLS*WIRSGTDRETS
Trigger: AGAGGTTTCCCTGTCAGTACCTGACCTAATCCACAAGGATAGCCAGGACGAATCCAAGCTAAAGATGACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426197.2
ENST00000458626.4