RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C1ORF198 (Homo sapiens)

Ensembl gene IDs: ENSG00000119280

Ensembl transcript IDs: ENST00000366663.10, ENST00000427697.2, ENST00000470540.5, ENST00000519360.1, ENST00000521263.1, ENST00000522201.1, ENST00000523410.1

Found 573 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAGAAGGTGGAGGCAGGTGGCCGCTGATTCTGAGGATCCCTGTGTaGACAGTGCCGTTAGCCCTGAGGGGAGCTGGCGCTTGCCCAGGC +
Preference number: 1 (lower is better)
Translates to: AEGGGRWPLILRIPV*TVPLALRGAGACPG
Trigger: GCCTGGGCAAGCGCCAGCTCCCCTCAGGGCTAACGGCACTGTTCACACAGGGATCCTCAGAATCAGCGGCCACCTGCCTCCACCTTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR TCA 90 bp CGCAGTCTGTTCCCTGGAAATGGCGTGAGGGTGGAGGCTGGCACATaGTGTGAGAGACATGGCTTCTGCCAGAGAAGCCCCGGACAGCTG +
Preference number: 1 (lower is better)
Translates to: RSLFPGNGVRVEAGT*CERHGFCQRSPGQL
Trigger: CAGCTGTCCGGGGCTTCTCTGGCAGAAGCCATGTCTCTCACATCATGTGCCAGCCTCCACCCTCACGCCATTTCCAGGGAACAGACTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR GCA 90 bp CCACTGGGCAGCCTTGGTGTCTGCACCAGCTCCAAGAGATACTGCTaGTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGTTGACC +
Preference number: 1 (lower is better)
Translates to: PLGSLGVCTSSKRYC*SDTTQVSMGTAELT
Trigger: GGTCAACTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCTGGTGCAGACACCAAGGCTGCCCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR GCA 90 bp CTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTGTCTaGACCAGCTCCAAGAGATACTGCTGCTCTGACACCACGCAGGTC +
Preference number: 1 (lower is better)
Translates to: LGEVDHVVPLGSLGV*TSSKRYCCSDTTQV
Trigger: GACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCTGGTGCAGACACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR TCA 90 bp ACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGTTaGCCGCAAACTCCACTCTTCCACTTCTGGTGGTGGTCAGGGCTG +
Preference number: 1 (lower is better)
Translates to: TAALTPRRSPWALLS*PQTPLFHFWWWSGL
Trigger: CAGCCCTGACCACCACCAGAAGTGGAAGAGTGGAGTTTGCGGTCAACTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR GCA 90 bp GTACCACTGGGCAGCCTTGGTGTCTGCACCAGCTCCAAGAGATACTaGTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGTTG +
Preference number: 1 (lower is better)
Translates to: VPLGSLGVCTSSKRY*CSDTTQVSMGTAEL
Trigger: CAACTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCTGGTGCAGACACCAAGGCTGCCCAGTGGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR CCA 90 bp TTCTGGTGGTGGTCAGGGCTGGGGAAGGTCCGTCATGACGCAACCTaGCTAGCCCTTGGGATAAAGAATGCCCACTGCTCCCATCAGTCC +
Preference number: 1 (lower is better)
Translates to: FWWWSGLGKVRHDAT*LALGIKNAHCSHQS
Trigger: GGACTGATGGGAGCAGTGGGCATTCTTTATCCCAAGGGCTAGCCAGGTTGCGTCATGACGGACCTTCCCCAGCCCTGACCACCACCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR TCA 90 bp ACTCTTCCACTTCTGGTGGTGGTCAGGGCTGGGGAAGGTCCGTCATaGCGCAACCTGGCTAGCCCTTGGGATAAAGAATGCCCACTGCTC +
Preference number: 1 (lower is better)
Translates to: TLPLLVVVRAGEGPS*RNLASPWDKECPLL
Trigger: GAGCAGTGGGCATTCTTTATCCCAAGGGCTAGCCAGGTTGCGTCATGACGGACCTTCCCCAGCCCTGACCACCACCAGAAGTGGAAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR TCA 90 bp CACTGGCAGGTGTCGCAAAGATTAAGGCTTCAGGTGAGAACGCAGTaGTGGCAACATGGAGATGGCGCCATACCGGGCTTGAGGCTCTGC +
Preference number: 1 (lower is better)
Translates to: HWQVSQRLRLQVRTQ*WQHGDGAIPGLRLC
Trigger: GCAGAGCCTCAAGCCCGGTATGGCGCCATCTCCATGTTGCCATCACTGCGTTCTCACCTGAAGCCTTAATCTTTGCGACACCTGCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR CCA 90 bp GTCGCAAAGATTAAGGCTTCAGGTGAGAACGCAGTGATGGCAACATaGAGATGGCGCCATACCGGGCTTGAGGCTCTGCTCAGACGCCTC +
Preference number: 1 (lower is better)
Translates to: VAKIKASGENAVMAT*RWRHTGLEALLRRL
Trigger: GAGGCGTCTGAGCAGAGCCTCAAGCCCGGTATGGCGCCATCTCCATGTTGCCATCACTGCGTTCTCACCTGAAGCCTTAATCTTTGCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR GCA 90 bp GCTAGCCCTTGGGATAAAGAATGCCCACTGCTCCCATCAGTCCCATaGTGGAAGACTCTAACACAACTAAGCAGAAGAGCCCTGACCTCC +
Preference number: 1 (lower is better)
Translates to: ASPWDKECPLLPSVP*WKTLTQLSRRALTS
Trigger: GGAGGTCAGGGCTCTTCTGCTTAGTTGTGTTAGAGTCTTCCAGCATGGGACTGATGGGAGCAGTGGGCATTCTTTATCCCAAGGGCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR CCA 90 bp AGCCCTTGGGATAAAGAATGCCCACTGCTCCCATCAGTCCCATGCTaGAAGACTCTAACACAACTAAGCAGAAGAGCCCTGACCTCCAGC +
Preference number: 1 (lower is better)
Translates to: SPWDKECPLLPSVPC*KTLTQLSRRALTSS
Trigger: GCTGGAGGTCAGGGCTCTTCTGCTTAGTTGTGTTAGAGTCTTCCAGCATGGGACTGATGGGAGCAGTGGGCATTCTTTATCCCAAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR GCA 90 bp GCAGATCACCTTGGCCTACTCTCTAGGACACAGGTCTTTCTTCTGTaGTACACCAACACTACAGAATACAAACTCATACATATACATTTG +
Preference number: 1 (lower is better)
Translates to: ADHLGLLSRTQVFLL*YTNTTEYKLIHIHL
Trigger: CAAATGTATATGTATGAGTTTGTATTCTGTAGTGTTGGTGTAGCACAGAAGAAAGACCTGTGTCCTAGAGAGTAGGCCAAGGTGATCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR CCA 90 bp TGTGACATGGTTGAAACACATCCTTTGAGGAGGGGGAAAGTTGGGTaGAGCTGGGAACAGAAGTTTTATTTACAAGATCTCCTGAATTAT +
Preference number: 1 (lower is better)
Translates to: CDMVETHPLRRGKVG*SWEQKFYLQDLLNY
Trigger: ATAATTCAGGAGATCTTGTAAATAAAACTTCTGTTCCCAGCTCCACCCAACTTTCCCCCTCCTCAAAGGATGTGTTTCAACCATGTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp GCTGATTCTGAGGATCCCTGTGTGAACAGTGCCGTTAGCCCTGAGGGGAGCTGGGACAGCTGCGAGCGCTaGCTGAGAACGTCGCTGGGG +
Preference number: 2 (lower is better)
Translates to: ADSEDPCVNSAVSPEGSWDSCER*LRTSLG
Trigger: CCCCAGCGACGTTCTCAGCCAGCGCTCGCAGCTGTC...CCAGCTCCCCTCAGGGCTAACGGCACTGTTCACACAGGGATCCTCAGAATCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp GCAGCAGCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTCCACTCTTCCACTTCTaGTGGTGGTCAGGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: AAASLGEVDHVVPLGSLGPLFHF*WWSGLG
Trigger: CCCCAGCCCTGACCACCACCAGAAGTGGAAGAGTGG...ACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR TCA 90 bp GCAGCAGCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTCTCCATGGGCACTGCTaGGTTGACCGCAAACTCCAC +
Preference number: 2 (lower is better)
Translates to: AAASLGEVDHVVPLGSLGLHGHC*VDRKLH
Trigger: GTGGAGTTTGCGGTCAACTCAGCAGTGCCCATGGAG...ACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp TCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGGACAGCTGCGAGCGCTaGCTGAGAACGTCGCTGGGG +
Preference number: 2 (lower is better)
Translates to: SKRYCCSDTTQVSMGTAEDSCER*LRTSLG
Trigger: CCCCAGCGACGTTCTCAGCCAGCGCTCGCAGCTGTC...CTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp TGGCAACATGGAGATGGCGCCATACCGGGCTTGAGGCTCTGCTCAGACGCCTCCTCTGTTCCCTGGAAATaGCGTGAGGGTGGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: WQHGDGAIPGLRLCSDASSVPWK*REGGGW
Trigger: CCAGCCTCCACCCTCACGCCATTTCCAGGGAACAGA...GGAGGCGTCTGAGCAGAGCCTCAAGCCCGGTATGGCGCCATCTCCATGTTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp TGGCAACATGGAGATGGCGCCATACCGGGCTTGAGGCTCTGCTCAGACGCCTCCCTCTTCCACTTCTGGTaGTGGTCAGGGCTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: WQHGDGAIPGLRLCSDASLFHFW*WSGLGK
Trigger: CTTCCCCAGCCCTGACCACCACCAGAAGTGGAAGAG...GGAGGCGTCTGAGCAGAGCCTCAAGCCCGGTATGGCGCCATCTCCATGTTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR GCA 90 bp TGGCAACATGGAGATGGCGCCATACCGGGCTTGAGGCTCTGCTCAGACGCCTCCGGCAGCCTTGGTGTCTaGACCAGCTCCAAGAGATAC +
Preference number: 2 (lower is better)
Translates to: WQHGDGAIPGLRLCSDASGSLGV*TSSKRY
Trigger: GTATCTCTTGGAGCTGGTGCAGACACCAAGGCTGCC...GGAGGCGTCTGAGCAGAGCCTCAAGCCCGGTATGGCGCCATCTCCATGTTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR TCA 90 bp GCTGATTCTGAGGATCCCTGTGTGAACAGTGCCGTTAGCCCTGAGGGGAGCTGGCTCCATGGGCACTGCTaGGTTGACCGCAAACTCCAC +
Preference number: 2 (lower is better)
Translates to: ADSEDPCVNSAVSPEGSWLHGHC*VDRKLH
Trigger: GTGGAGTTTGCGGTCAACTCAGCAGTGCCCATGGAG...CCAGCTCCCCTCAGGGCTAACGGCACTGTTCACACAGGGATCCTCAGAATCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR GCA 90 bp CCAGCTCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGGAGAGACATGGCTTCTaGCAGAGAAGCCCCGGACAG +
Preference number: 2 (lower is better)
Translates to: PAPRDTAALTPRRSPWALERHGF*QRSPGQ
Trigger: CTGTCCGGGGCTTCTCTGGCAGAAGCCATGTCTCTC...CAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp GCTGATTCTGAGGATCCCTGTGTGAACAGTGCCGTTAGCCCTGAGGGGAGCTGGCCGCAGTCTGTTCCCTaGAAATGGCGTGAGGGTGGA +
Preference number: 2 (lower is better)
Translates to: ADSEDPCVNSAVSPEGSWPQSVP*KWREGG
Trigger: TCCACCCTCACGCCATTTCCAGGGAACAGACTGCGG...CCAGCTCCCCTCAGGGCTAACGGCACTGTTCACACAGGGATCCTCAGAATCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp CCAGCTCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTCTTCCACTTCTGGTaGTGGTCAGGGCTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: PAPRDTAALTPRRSPWALLFHFW*WSGLGK
Trigger: CTTCCCCAGCCCTGACCACCACCAGAAGTGGAAGAG...CAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp TCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGCCACTCTTCCACTTCTaGTGGTGGTCAGGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: SKRYCCSDTTQVSMGTAEPLFHF*WWSGLG
Trigger: CCCCAGCCCTGACCACCACCAGAAGTGGAAGAGTGG...CTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR CAA 90 bp TACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGTaGACCGCAAACTCCACTCTTCCACTTCTGGTGGTGGTCAGGGCT +
Preference number: 2 (lower is better)
Translates to: YCCSDTTQVSMGTAE*TANSTLPLLVVVRA
Trigger: AGCCCTGACCACCACCAGAAGTGGAAGAGTGGAGTTTGCGGTCAACTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR TCA 90 bp CCAGCTCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGGGCTGGCACATGATGTaGGAGACATGGCTTCTGCCA +
Preference number: 2 (lower is better)
Translates to: PAPRDTAALTPRRSPWALGWHMM*ETWLLP
Trigger: TGGCAGAAGCCATGTCTCTCACATCATGTGCCAGCC...CAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR GCA 90 bp TCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGGAGAGACATGGCTTCTaGCAGAGAAGCCCCGGACAG +
Preference number: 2 (lower is better)
Translates to: SKRYCCSDTTQVSMGTAEERHGF*QRSPGQ
Trigger: CTGTCCGGGGCTTCTCTGGCAGAAGCCATGTCTCTC...CTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp GCTGATTCTGAGGATCCCTGTGTGAACAGTGCCGTTAGCCCTGAGGGGAGCTGGGAGGAGGGGGAAAGTTaGGTGGAGCTGGGAACAGAA +
Preference number: 2 (lower is better)
Translates to: ADSEDPCVNSAVSPEGSWEEGES*VELGTE
Trigger: TTCTGTTCCCAGCTCCACCCAACTTTCCCCCTCCTC...CCAGCTCCCCTCAGGGCTAACGGCACTGTTCACACAGGGATCCTCAGAATCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR TCA 90 bp GCTGATTCTGAGGATCCCTGTGTGAACAGTGCCGTTAGCCCTGAGGGGAGCTGGGACACACTTTGGTATTaGAACCGAGCGCTCACTGGC +
Preference number: 2 (lower is better)
Translates to: ADSEDPCVNSAVSPEGSWDTLWY*NRALTG
Trigger: GCCAGTGAGCGCTCGGTTTCAATACCAAAGTGTGTC...CCAGCTCCCCTCAGGGCTAACGGCACTGTTCACACAGGGATCCTCAGAATCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR GCA 90 bp TGGCAACATGGAGATGGCGCCATACCGGGCTTGAGGCTCTGCTCAGACGCCTCCCTCCCATCAGTCCCATaGTGGAAGACTCTAACACAA +
Preference number: 2 (lower is better)
Translates to: WQHGDGAIPGLRLCSDASLPSVP*WKTLTQ
Trigger: TTGTGTTAGAGTCTTCCAGCATGGGACTGATGGGAG...GGAGGCGTCTGAGCAGAGCCTCAAGCCCGGTATGGCGCCATCTCCATGTTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp CCAGCTCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCGTCATGACGCAACCTaGCTAGCCCTTGGGATAAAG +
Preference number: 2 (lower is better)
Translates to: PAPRDTAALTPRRSPWALRHDAT*LALGIK
Trigger: CTTTATCCCAAGGGCTAGCCAGGTTGCGTCATGACG...CAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR GCA 90 bp AAGAAACCATCTTCGCATAGACTTTGCCCAAGGTGTAGAGGAAGATCTGCCGGTCCGGGCTTGAGGCTCTaGTCAGACGCCTCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: KKPSSHRLCPRCRGRSAGPGLRL*SDASCR
Trigger: CCTGCAGGAGGCGTCTGAGCAGAGCCTCAAGCCCGG...ACCGGCAGATCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGATGGTTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp TGGCAACATGGAGATGGCGCCATACCGGGCTTGAGGCTCTGCTCAGACGCCTCCAGCATGCTGATGTCATaGCTGATAACATCACCCTCA +
Preference number: 2 (lower is better)
Translates to: WQHGDGAIPGLRLCSDASSMLMS*LITSPS
Trigger: TGAGGGTGATGTTATCAGCCATGACATCAGCATGCT...GGAGGCGTCTGAGCAGAGCCTCAAGCCCGGTATGGCGCCATCTCCATGTTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR TCA 90 bp CATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGGCTGCGAGCGCTGGCTaGGAACGTCGCTGGGGGCCA +
Preference number: 2 (lower is better)
Translates to: HDEWEENHGKWRAKKPSSAASAG*ERRWGP
Trigger: TGGCCCCCAGCGACGTTCTCAGCCAGCGCTCGCAGC...CGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR TCA 90 bp AAGAAACCATCTTCGCATAGACTTTGCCCAAGGTGTAGAGGAAGATCTGCCGGTGGGGAAGGTCCGTCATaGCGCAACCTGGCTAGCCCT +
Preference number: 2 (lower is better)
Translates to: KKPSSHRLCPRCRGRSAGGEGPS*RNLASP
Trigger: AGGGCTAGCCAGGTTGCGTCATGACGGACCTTCCCC...ACCGGCAGATCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGATGGTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR TCA 90 bp TCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGTTGAAACACATCCTTTaGGGAGGGGGAAAGTTGGGT +
Preference number: 2 (lower is better)
Translates to: SKRYCCSDTTQVSMGTAELKHIL*GGGKLG
Trigger: ACCCAACTTTCCCCCTCCTCAAAGGATGTGTTTCAA...CTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR TCA 90 bp GCTGATTCTGAGGATCCCTGTGTGAACAGTGCCGTTAGCCCTGAGGGGAGCTGGGATGAGGGGTTGAGGTaGGTTGCTATGTGCTTTATT +
Preference number: 2 (lower is better)
Translates to: ADSEDPCVNSAVSPEGSWDEGLR*VAMCFI
Trigger: AATAAAGCACATAGCAACTCACCTCAACCCCTCATC...CCAGCTCCCCTCAGGGCTAACGGCACTGTTCACACAGGGATCCTCAGAATCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR GCA 90 bp AAGAAACCATCTTCGCATAGACTTTGCCCAAGGTGTAGAGGAAGATCTGCCGGTGCCACATCTGCCGTCTaGCCTGACTCCTGTAGGTGC +
Preference number: 2 (lower is better)
Translates to: KKPSSHRLCPRCRGRSAGATSAV*PDSCRC
Trigger: GCACCTACAGGAGTCAGGGCAGACGGCAGATGTGGC...ACCGGCAGATCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGATGGTTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR GCA 90 bp GACACCACGCAGGTCTCCATGGGCACTGCTGAGTTGACCGCAAACTCCACTCTTATAAAGAATGCCCACTaGTCCCATCAGTCCCATGCT +
Preference number: 2 (lower is better)
Translates to: DTTQVSMGTAELTANSTLIKNAH*SHQSHA
Trigger: AGCATGGGACTGATGGGAGCAGTGGGCATTCTTTAT...AAGAGTGGAGTTTGCGGTCAACTCAGCAGTGCCCATGGAGACCTGCGTGGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR GCA 90 bp TCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGATAAAGAATGCCCACTaGTCCCATCAGTCCCATGCT +
Preference number: 2 (lower is better)
Translates to: SKRYCCSDTTQVSMGTAEIKNAH*SHQSHA
Trigger: AGCATGGGACTGATGGGAGCAGTGGGCATTCTTTAT...CTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp AGCCTGTGTCCTCCAGGTCGTCCCTTCTTCCAAAAGCACAGCAAAGCAATACAATCTGTTCCCTGGAAATaGCGTGAGGGTGGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: SLCPPGRPFFQKHSKAIQSVPWK*REGGGW
Trigger: CCAGCCTCCACCCTCACGCCATTTCCAGGGAACAGA...TTGTATTGCTTTGCTGTGCTTTTGGAAGAAGGGACGACCTGGAGGACACAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp AAGATTAAGGCTTCAGGTGAGAACGCAGTGATGGCAACATGGAGATGGCGCCATTTCCACTTCTGGTGGTaGTCAGGGCTGGGGAAGGTC +
Preference number: 2 (lower is better)
Translates to: KIKASGENAVMATWRWRHFHFWW*SGLGKV
Trigger: GACCTTCCCCAGCCCTGACCACCACCAGAAGTGGAA...ATGGCGCCATCTCCATGTTGCCATCACTGCGTTCTCACCTGAAGCCTTAATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR GCA 90 bp CATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGGAAGCCCCGGACAGCTaGGAGCGCTGGCTGAGAACG +
Preference number: 2 (lower is better)
Translates to: HDEWEENHGKWRAKKPSSEAPDS*ERWLRT
Trigger: CGTTCTCAGCCAGCGCTCGCAGCTGTCCGGGGCTTC...CGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR GCA 90 bp AAGATTAAGGCTTCAGGTGAGAACGCAGTGATGGCAACATGGAGATGGCGCCATGGCAGCCTTGGTGTCTaGACCAGCTCCAAGAGATAC +
Preference number: 2 (lower is better)
Translates to: KIKASGENAVMATWRWRHGSLGV*TSSKRY
Trigger: GTATCTCTTGGAGCTGGTGCAGACACCAAGGCTGCC...ATGGCGCCATCTCCATGTTGCCATCACTGCGTTCTCACCTGAAGCCTTAATCTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR GCA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGTGCTCAGACGCCTCCTaGAGGCTCACACGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRCSDAS*RLTRLR
Trigger: CCTGAGCCGTGTGAGCCTGCAGGAGGCGTCTGAGCA...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR GCA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGACCGGGCTTGAGGCTCTaGTCAGACGCCTCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: RNSLMMNGRKIMANGELRPGLRL*SDASCR
Trigger: CCTGCAGGAGGCGTCTGAGCAGAGCCTCAAGCCCGG...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR GCA 90 bp AGCCTGTGTCCTCCAGGTCGTCCCTTCTTCCAAAAGCACAGCAAAGCAATACAACGCTTGCCCAGGCTGTaGCAACTGGGATTTCTAAGC +
Preference number: 2 (lower is better)
Translates to: SLCPPGRPFFQKHSKAIQRLPRL*QLGFLS
Trigger: GCTTAGAAATCCCAGTTGGCACAGCCTGGGCAAGCG...TTGTATTGCTTTGCTGTGCTTTTGGAAGAAGGGACGACCTGGAGGACACAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp AAGATTAAGGCTTCAGGTGAGAACGCAGTGATGGCAACATGGAGATGGCGCCATGAGGAGGGGGAAAGTTaGGTGGAGCTGGGAACAGAA +
Preference number: 2 (lower is better)
Translates to: KIKASGENAVMATWRWRHEEGES*VELGTE
Trigger: TTCTGTTCCCAGCTCCACCCAACTTTCCCCCTCCTC...ATGGCGCCATCTCCATGTTGCCATCACTGCGTTCTCACCTGAAGCCTTAATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGGGTGGTGGTCAGGGCTaGGGAAGGTCCGTCATGACG +
Preference number: 2 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRGGGQG*GRSVMT
Trigger: CGTCATGACGGACCTTCCCCAGCCCTGACCACCACC...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR TCA 90 bp CATCACCCTCAATCACCCACCAAAAGGAACCCATACGGTAAAAAGCGGAGGGGGTTGAAACACATCCTTTaGGGAGGGGGAAAGTTGGGT +
Preference number: 2 (lower is better)
Translates to: HHPQSPTKRNPYGKKRRGLKHIL*GGGKLG
Trigger: ACCCAACTTTCCCCCTCCTCAAAGGATGTGTTTCAA...CCCCCTCCGCTTTTTACCGTATGGGTTCCTTTTGGTGGGTGATTGAGGGTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR TCA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAGGGGAAGGTCCGTCATaGCGCAACCTGGCTAGCCCT +
Preference number: 2 (lower is better)
Translates to: RNSLMMNGRKIMANGELRGEGPS*RNLASP
Trigger: AGGGCTAGCCAGGTTGCGTCATGACGGACCTTCCCC...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR TCA 90 bp TATACCCCAAGGATCCAAATGAGGTTTAGGGACATAAAACAATTGGCAAGAACCGCGCCATACCGGGCTTaGGGCTCTGCTCAGACGCCT +
Preference number: 2 (lower is better)
Translates to: YTPRIQMRFRDIKQLARTAPYRA*GSAQTP
Trigger: AGGCGTCTGAGCAGAGCCTCAAGCCCGGTATGGCGC...GGTTCTTGCCAATTGTTTTATGTCCCTAAACCTCATTTGGATCCTTGGGGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp TATACCCCAAGGATCCAAATGAGGTTTAGGGACATAAAACAATTGGCAAGAACCGACAGCTGCGAGCGCTaGCTGAGAACGTCGCTGGGG +
Preference number: 2 (lower is better)
Translates to: YTPRIQMRFRDIKQLARTDSCER*LRTSLG
Trigger: CCCCAGCGACGTTCTCAGCCAGCGCTCGCAGCTGTC...GGTTCTTGCCAATTGTTTTATGTCCCTAAACCTCATTTGGATCCTTGGGGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR TCA 90 bp TCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGCAACAATCCATACTCTaGATATGTATCAGAGCAGGT +
Preference number: 2 (lower is better)
Translates to: SKRYCCSDTTQVSMGTAEQQSIL*ICIRAG
Trigger: ACCTGCTCTGATACATATTCAGAGTATGGATTGTTG...CTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR TCA 90 bp TATACCCCAAGGATCCAAATGAGGTTTAGGGACATAAAACAATTGGCAAGAACCGGGGAAGGTCCGTCATaGCGCAACCTGGCTAGCCCT +
Preference number: 2 (lower is better)
Translates to: YTPRIQMRFRDIKQLARTGEGPS*RNLASP
Trigger: AGGGCTAGCCAGGTTGCGTCATGACGGACCTTCCCC...GGTTCTTGCCAATTGTTTTATGTCCCTAAACCTCATTTGGATCCTTGGGGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR TCA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGCTCCATGGGCACTGCTaGGTTGACCGCAAACTCCAC +
Preference number: 2 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRLHGHC*VDRKLH
Trigger: GTGGAGTTTGCGGTCAACTCAGCAGTGCCCATGGAG...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR TCA 90 bp AGCCTGTGTCCTCCAGGTCGTCCCTTCTTCCAAAAGCACAGCAAAGCAATACAAGAGATGATGAGGGGTTaGGGTGAGTTGCTATGTGCT +
Preference number: 2 (lower is better)
Translates to: SLCPPGRPFFQKHSKAIQEMMRG*GELLCA
Trigger: AGCACATAGCAACTCACCTCAACCCCTCATCATCTC...TTGTATTGCTTTGCTGTGCTTTTGGAAGAAGGGACGACCTGGAGGACACAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR GCA 90 bp CCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAAATGGATATAAAACCAGAAGCCCCGGACAGCTaGGAGCGCTGGCTGAGAACG +
Preference number: 2 (lower is better)
Translates to: PTGHISNKNFQEEMDIKPEAPDS*ERWLRT
Trigger: CGTTCTCAGCCAGCGCTCGCAGCTGTCCGGGGCTTC...TGGTTTTATATCCATTTCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR GCA 90 bp AAGAAACCATCTTCGCATAGACTTTGCCCAAGGTGTAGAGGAAGATCTGCCGGTAGCTCCAAGAGATACTaGTGCTCTGACACCACGCAG +
Preference number: 2 (lower is better)
Translates to: KKPSSHRLCPRCRGRSAGSSKRY*CSDTTQ
Trigger: CTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCT...ACCGGCAGATCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGATGGTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp CCAGCTCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGAAAGTTGGGTGGAGCTaGGAACAGAAGTTTTATTTA +
Preference number: 2 (lower is better)
Translates to: PAPRDTAALTPRRSPWALKVGWS*EQKFYL
Trigger: TAAATAAAACTTCTGTTCCCAGCTCCACCCAACTTT...CAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGACCACTGGGCAGCCTTaGTGTCTGCACCAGCTCCAA +
Preference number: 2 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRTTGQP*CLHQLQ
Trigger: TTGGAGCTGGTGCAGACACCAAGGCTGCCCAGTGGT...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR TCA 90 bp AGCCTGTGTCCTCCAGGTCGTCCCTTCTTCCAAAAGCACAGCAAAGCAATACAATTGAAACACATCCTTTaGGGAGGGGGAAAGTTGGGT +
Preference number: 2 (lower is better)
Translates to: SLCPPGRPFFQKHSKAIQLKHIL*GGGKLG
Trigger: ACCCAACTTTCCCCCTCCTCAAAGGATGTGTTTCAA...TTGTATTGCTTTGCTGTGCTTTTGGAAGAAGGGACGACCTGGAGGACACAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR TCA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGTGGGCACTGCTGAGTTaGCCGCAAACTCCACTCTTC +
Preference number: 2 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRWALLS*PQTPLF
Trigger: GAAGAGTGGAGTTTGCGGTCAACTCAGCAGTGCCCA...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR TCA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGACTGAGGATCCCTGTGTaGACAGTGCCGTTAGCCCTG +
Preference number: 2 (lower is better)
Translates to: RNSLMMNGRKIMANGELRLRIPV*TVPLAL
Trigger: CAGGGCTAACGGCACTGTTCACACAGGGATCCTCAG...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGATCTGTTCCCTGGAAATaGCGTGAGGGTGGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: RNSLMMNGRKIMANGELRSVPWK*REGGGW
Trigger: CCAGCCTCCACCCTCACGCCATTTCCAGGGAACAGA...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp CATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGACCACTGGGCAGCCTTaGTGTCTGCACCAGCTCCAA +
Preference number: 2 (lower is better)
Translates to: HDEWEENHGKWRAKKPSSTTGQP*CLHQLQ
Trigger: TTGGAGCTGGTGCAGACACCAAGGCTGCCCAGTGGT...CGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGACCACGTTGTACCACTaGGCAGCCTTGGTGTCTGCA +
Preference number: 2 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRTTLYH*AALVSA
Trigger: TGCAGACACCAAGGCTGCCCAGTGGTACAACGTGGT...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGATGGCAACATGGAGATaGCGCCATACCGGGCTTGAG +
Preference number: 2 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRMATWR*RHTGLE
Trigger: CTCAAGCCCGGTATGGCGCCATCTCCATGTTGCCAT...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR TCA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGATGGGCACTGCTGAGTTaGCCGCAAACTCCACTCTTC +
Preference number: 2 (lower is better)
Translates to: RNSLMMNGRKIMANGELRWALLS*PQTPLF
Trigger: GAAGAGTGGAGTTTGCGGTCAACTCAGCAGTGCCCA...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR TCA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGGACACACTTTGGTATTaGAACCGAGCGCTCACTGGC +
Preference number: 2 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRDTLWY*NRALTG
Trigger: GCCAGTGAGCGCTCGGTTTCAATACCAAAGTGTGTC...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp CATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGGAGGAGGGGGAAAGTTaGGTGGAGCTGGGAACAGAA +
Preference number: 2 (lower is better)
Translates to: HDEWEENHGKWRAKKPSSEEGES*VELGTE
Trigger: TTCTGTTCCCAGCTCCACCCAACTTTCCCCCTCCTC...CGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp CCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAAGCATGCTGATGTCATaGCTGATAACATCACCCTCA +
Preference number: 2 (lower is better)
Translates to: PVRGTTNRSHKQQELPRGSMLMS*LITSPS
Trigger: TGAGGGTGATGTTATCAGCCATGACATCAGCATGCT...TCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAATGGCAACATGGAGATaGCGCCATACCGGGCTTGAG +
Preference number: 2 (lower is better)
Translates to: RNSLMMNGRKIMANGELRMATWR*RHTGLE
Trigger: CTCAAGCCCGGTATGGCGCCATCTCCATGTTGCCAT...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp AAGAAACCATCTTCGCATAGACTTTGCCCAAGGTGTAGAGGAAGATCTGCCGGTGCTATGCCACAGCTTTaGCAGAAACTTTCCTGGAGA +
Preference number: 2 (lower is better)
Translates to: KKPSSHRLCPRCRGRSAGAMPQL*QKLSWR
Trigger: TCTCCAGGAAAGTTTCTGCCAAAGCTGTGGCATAGC...ACCGGCAGATCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGATGGTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR TCA 90 bp TATACCCCAAGGATCCAAATGAGGTTTAGGGACATAAAACAATTGGCAAGAACCGAGATACTGCTGCTCTaGCACCACGCAGGTCTCCAT +
Preference number: 2 (lower is better)
Translates to: YTPRIQMRFRDIKQLARTEILLL*HHAGLH
Trigger: ATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTC...GGTTCTTGCCAATTGTTTTATGTCCCTAAACCTCATTTGGATCCTTGGGGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR GCA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGATCCAAGAGATACTGCTaGTCTGACACCACGCAGGTC +
Preference number: 2 (lower is better)
Translates to: RNSLMMNGRKIMANGELRSKRYC*SDTTQV
Trigger: GACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR GCA 90 bp CATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGAGAGTTATTGCTGGGTaGTGGGCCCCAGACGATACT +
Preference number: 2 (lower is better)
Translates to: HDEWEENHGKWRAKKPSSRVIAG*WAPDDT
Trigger: AGTATCGTCTGGGGCCCAGCACCCAGCAATAACTCT...CGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp CATCACCCTCAATCACCCACCAAAAGGAACCCATACGGTAAAAAGCGGAGGGGGAAAGTTGGGTGGAGCTaGGAACAGAAGTTTTATTTA +
Preference number: 2 (lower is better)
Translates to: HHPQSPTKRNPYGKKRRGKVGWS*EQKFYL
Trigger: TAAATAAAACTTCTGTTCCCAGCTCCACCCAACTTT...CCCCCTCCGCTTTTTACCGTATGGGTTCCTTTTGGTGGGTGATTGAGGGTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGACGTCATGACGCAACCTaGCTAGCCCTTGGGATAAAG +
Preference number: 2 (lower is better)
Translates to: RNSLMMNGRKIMANGELRRHDAT*LALGIK
Trigger: CTTTATCCCAAGGGCTAGCCAGGTTGCGTCATGACG...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp TATACCCCAAGGATCCAAATGAGGTTTAGGGACATAAAACAATTGGCAAGAACCACCACGTTGTACCACTaGGCAGCCTTGGTGTCTGCA +
Preference number: 2 (lower is better)
Translates to: YTPRIQMRFRDIKQLARTTTLYH*AALVSA
Trigger: TGCAGACACCAAGGCTGCCCAGTGGTACAACGTGGT...GGTTCTTGCCAATTGTTTTATGTCCCTAAACCTCATTTGGATCCTTGGGGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp AGCCTGTGTCCTCCAGGTCGTCCCTTCTTCCAAAAGCACAGCAAAGCAATACAAAACCAAATCAAAAGTTaGCTATGCCACAGCTTTGGC +
Preference number: 2 (lower is better)
Translates to: SLCPPGRPFFQKHSKAIQNQIKS*LCHSFG
Trigger: GCCAAAGCTGTGGCATAGCCAACTTTTGATTTGGTT...TTGTATTGCTTTGCTGTGCTTTTGGAAGAAGGGACGACCTGGAGGACACAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR TCA 90 bp CCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGACAACAATCCATACTCTaGATATGTATCAGAGCAGGT +
Preference number: 2 (lower is better)
Translates to: PVRGTTNRSHKQQELPRGQQSIL*ICIRAG
Trigger: ACCTGCTCTGATACATATTCAGAGTATGGATTGTTG...TCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR GCA 90 bp TATACCCCAAGGATCCAAATGAGGTTTAGGGACATAAAACAATTGGCAAGAACCAGCTCCAAGAGATACTaGTGCTCTGACACCACGCAG +
Preference number: 2 (lower is better)
Translates to: YTPRIQMRFRDIKQLARTSSKRY*CSDTTQ
Trigger: CTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCT...GGTTCTTGCCAATTGTTTTATGTCCCTAAACCTCATTTGGATCCTTGGGGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp CATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGAGGGGGAAAGTTGGGTaGAGCTGGGAACAGAAGTTT +
Preference number: 2 (lower is better)
Translates to: HDEWEENHGKWRAKKPSSRGKVG*SWEQKF
Trigger: AAACTTCTGTTCCCAGCTCCACCCAACTTTCCCCCT...CGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAACCTGGCTAGCCCTTaGGATAAAGAATGCCCACTG +
Preference number: 2 (lower is better)
Translates to: RNSLMMNGRKIMANGELRNLASP*DKECPL
Trigger: CAGTGGGCATTCTTTATCCCAAGGGCTAGCCAGGTT...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAAACCGAGCGCTCACTaGCAGGTGTCGCAAAGATTA +
Preference number: 2 (lower is better)
Translates to: RNSLMMNGRKIMANGELRKPSAH*QVSQRL
Trigger: TAATCTTTGCGACACCTGCCAGTGAGCGCTCGGTTT...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp AAGATTAAGGCTTCAGGTGAGAACGCAGTGATGGCAACATGGAGATGGCGCCATAAAGTTGGGTGGAGCTaGGAACAGAAGTTTTATTTA +
Preference number: 2 (lower is better)
Translates to: KIKASGENAVMATWRWRHKVGWS*EQKFYL
Trigger: TAAATAAAACTTCTGTTCCCAGCTCCACCCAACTTT...ATGGCGCCATCTCCATGTTGCCATCACTGCGTTCTCACCTGAAGCCTTAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGAGCATGCTGATGTCATaGCTGATAACATCACCCTCA +
Preference number: 2 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRSMLMS*LITSPS
Trigger: TGAGGGTGATGTTATCAGCCATGACATCAGCATGCT...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp CATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCCATCAGTCCCATGCTaGAAGACTCTAACACAACTA +
Preference number: 2 (lower is better)
Translates to: HDEWEENHGKWRAKKPSSPSVPC*KTLTQL
Trigger: TAGTTGTGTTAGAGTCTTCCAGCATGGGACTGATGG...CGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGAACCAAATCAAAAGTTaGCTATGCCACAGCTTTGGC +
Preference number: 2 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRNQIKS*LCHSFG
Trigger: GCCAAAGCTGTGGCATAGCCAACTTTTGATTTGGTT...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR TCA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGACAAAGCAATACAACTTaGGGACTCCCTCCAAGATTT +
Preference number: 2 (lower is better)
Translates to: RNSLMMNGRKIMANGELRQSNTT*GLPPRF
Trigger: AAATCTTGGAGGGAGTCCTCAAGTTGTATTGCTTTG...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CCA 90 bp AATCCATACTCTGAATATGTATCAGAGCAGGTTAAAGACTACACTGCTACATACAGGGGGAAAGTTGGGTaGAGCTGGGAACAGAAGTTT +
Preference number: 2 (lower is better)
Translates to: NPYSEYVSEQVKDYTATYRGKVG*SWEQKF
Trigger: AAACTTCTGTTCCCAGCTCCACCCAACTTTCCCCCT...GTATGTAGCAGTGTAGTCTTTAACCTGCTCTGATACATATTCAGAGTATGGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR TCA 72 bp GGAGGCAGGTGGCCGCTGATTCTGAGGATCCCTGTGTaGACAGTGCCGTTAGCCCTGAGGGGAGCTGGCGCT +
Preference number: 3 (lower is better)
Translates to: GGRWPLILRIPV*TVPLALRGAGA
Trigger: AGCGCCAGCTCCCCTCAGGGCTAACGGCACTGTTCACACAGGGATCCTCAGAATCAGCGGCCACCTGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR GCA 72 bp CAACATGGAGATGGCGCCATACCGGGCTTGAGGCTCTaGTCAGACGCCTCCTGCAGGCTCACACGGCTCAGG +
Preference number: 3 (lower is better)
Translates to: QHGDGAIPGLRL*SDASCRLTRLR
Trigger: CCTGAGCCGTGTGAGCCTGCAGGAGGCGTCTGAGCAGAGCCTCAAGCCCGGTATGGCGCCATCTCCATGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CAA 90 bp TGGCAACATGGAGATGGCGCCATACCGGGCTTGAGGCTCTGCTCAGACGCCTCCTACCACTGGGCAGCCTaGGTGTCTGCACCAGCTCCA +
Preference number: 3 (lower is better)
Translates to: WQHGDGAIPGLRLCSDASYHWAA*VSAPAP
Trigger: TGGAGCTGGTGCAGACACCAAGGCTGCCCAGTGGTA...GGAGGCGTCTGAGCAGAGCCTCAAGCCCGGTATGGCGCCATCTCCATGTTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR GCA 72 bp CCAGCCACATCTGCCGTCTGCCCTGACTCCTGTAGGTaGCCAGTCCGGGGAACAACCAACAGGTCACATAAG +
Preference number: 3 (lower is better)
Translates to: PATSAVCPDSCR*PVRGTTNRSHK
Trigger: CTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCTACAGGAGTCAGGGCAGACGGCAGATGTGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR GCA 72 bp GGCAGCCTTGGTGTCTGCACCAGCTCCAAGAGATACTaGTGCTCTGACACCACGCAGGTCTCCATGGGCACT +
Preference number: 3 (lower is better)
Translates to: GSLGVCTSSKRY*CSDTTQVSMGT
Trigger: AGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCTGGTGCAGACACCAAGGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR CCA 72 bp TGGTCAGGGCTGGGGAAGGTCCGTCATGACGCAACCTaGCTAGCCCTTGGGATAAAGAATGCCCACTGCTCC +
Preference number: 3 (lower is better)
Translates to: WSGLGKVRHDAT*LALGIKNAHCS
Trigger: GGAGCAGTGGGCATTCTTTATCCCAAGGGCTAGCCAGGTTGCGTCATGACGGACCTTCCCCAGCCCTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR CCA 72 bp AGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTaGTGTCTGCACCAGCTCCAAGAGATACTGCTGCTC +
Preference number: 3 (lower is better)
Translates to: RGGGPRCTTGQP*CLHQLQEILLL
Trigger: GAGCAGCAGTATCTCTTGGAGCTGGTGCAGACACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR CCA 72 bp GCTTCAGGTGAGAACGCAGTGATGGCAACATGGAGATaGCGCCATACCGGGCTTGAGGCTCTGCTCAGACGC +
Preference number: 3 (lower is better)
Translates to: ASGENAVMATWR*RHTGLEALLRR
Trigger: GCGTCTGAGCAGAGCCTCAAGCCCGGTATGGCGCCATCTCCATGTTGCCATCACTGCGTTCTCACCTGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CAA 90 bp GCAGCAGCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTGTTGAAACACATCCTTaGAGGAGGGGGAAAGTTGGG +
Preference number: 3 (lower is better)
Translates to: AAASLGEVDHVVPLGSLGVETHP*RRGKVG
Trigger: CCCAACTTTCCCCCTCCTCAAAGGATGTGTTTCAAC...ACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGCTGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR TCA 72 bp CTTCTGGTGGTGGTCAGGGCTGGGGAAGGTCCGTCATaGCGCAACCTGGCTAGCCCTTGGGATAAAGAATGC +
Preference number: 3 (lower is better)
Translates to: LLVVVRAGEGPS*RNLASPWDKEC
Trigger: GCATTCTTTATCCCAAGGGCTAGCCAGGTTGCGTCATGACGGACCTTCCCCAGCCCTGACCACCACCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR TCA 72 bp CTGACACCACGCAGGTCTCCATGGGCACTGCTGAGTTaGCCGCAAACTCCACTCTTCCACTTCTGGTGGTGG +
Preference number: 3 (lower is better)
Translates to: LTPRRSPWALLS*PQTPLFHFWWW
Trigger: CCACCACCAGAAGTGGAAGAGTGGAGTTTGCGGTCAACTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR GCA 72 bp AGCCTTGGTGTCTGCACCAGCTCCAAGAGATACTGCTaGTCTGACACCACGCAGGTCTCCATGGGCACTGCT +
Preference number: 3 (lower is better)
Translates to: SLGVCTSSKRYC*SDTTQVSMGTA
Trigger: AGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCTGGTGCAGACACCAAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR GCA 72 bp GTGGACCACGTTGTACCACTGGGCAGCCTTGGTGTCTaGACCAGCTCCAAGAGATACTGCTGCTCTGACACC +
Preference number: 3 (lower is better)
Translates to: VDHVVPLGSLGV*TSSKRYCCSDT
Trigger: GGTGTCAGAGCAGCAGTATCTCTTGGAGCTGGTGCAGACACCAAGGCTGCCCAGTGGTACAACGTGGTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR CCA 72 bp ATTAAGGCTTCAGGTGAGAACGCAGTGATGGCAACATaGAGATGGCGCCATACCGGGCTTGAGGCTCTGCTC +
Preference number: 3 (lower is better)
Translates to: IKASGENAVMAT*RWRHTGLEALL
Trigger: GAGCAGAGCCTCAAGCCCGGTATGGCGCCATCTCCATGTTGCCATCACTGCGTTCTCACCTGAAGCCTTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR TCA 72 bp GTGTCGCAAAGATTAAGGCTTCAGGTGAGAACGCAGTaGTGGCAACATGGAGATGGCGCCATACCGGGCTTG +
Preference number: 3 (lower is better)
Translates to: VSQRLRLQVRTQ*WQHGDGAIPGL
Trigger: CAAGCCCGGTATGGCGCCATCTCCATGTTGCCATCACTGCGTTCTCACCTGAAGCCTTAATCTTTGCGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CAA 90 bp CATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGGGCGCCATACCGGGCTaGAGGCTCTGCTCAGACGCC +
Preference number: 3 (lower is better)
Translates to: HDEWEENHGKWRAKKPSSGAIPG*RLCSDA
Trigger: GGCGTCTGAGCAGAGCCTCAAGCCCGGTATGGCGCC...CGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CAA 90 bp TCCTGTAGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAAGTTGAAACACATCCTTaGAGGAGGGGGAAAGTTGGG +
Preference number: 3 (lower is better)
Translates to: SCRCPVRGTTNRSHKQQEVETHP*RRGKVG
Trigger: CCCAACTTTCCCCCTCCTCAAAGGATGTGTTTCAAC...TTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCTACAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CAA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGTACCACTGGGCAGCCTaGGTGTCTGCACCAGCTCCA +
Preference number: 3 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRYHWAA*VSAPAP
Trigger: TGGAGCTGGTGCAGACACCAAGGCTGCCCAGTGGTA...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR CCA 72 bp AGTCTTTCCGGGGTCACAGCCAGCATGCTGATGTCATaGCTGATAACATCACCCTCAATCACCCACCAAAAG +
Preference number: 3 (lower is better)
Translates to: SLSGVTASMLMS*LITSPSITHQK
Trigger: CTTTTGGTGGGTGATTGAGGGTGATGTTATCAGCCATGACATCAGCATGCTGGCTGTGACCCCGGAAAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CAA 90 bp AAGAAACCATCTTCGCATAGACTTTGCCCAAGGTGTAGAGGAAGATCTGCCGGTATGGGCACTGCTGAGTaGACCGCAAACTCCACTCTT +
Preference number: 3 (lower is better)
Translates to: KKPSSHRLCPRCRGRSAGMGTAE*TANSTL
Trigger: AAGAGTGGAGTTTGCGGTCAACTCAGCAGTGCCCAT...ACCGGCAGATCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGATGGTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CAA 90 bp AAGAAACCATCTTCGCATAGACTTTGCCCAAGGTGTAGAGGAAGATCTGCCGGTAAGAGGCAGATCACCTaGGCCTACTCTCTAGGACAC +
Preference number: 3 (lower is better)
Translates to: KKPSSHRLCPRCRGRSAGKRQIT*AYSLGH
Trigger: GTGTCCTAGAGAGTAGGCCAAGGTGATCTGCCTCTT...ACCGGCAGATCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGATGGTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR GCA 72 bp TGGGATAAAGAATGCCCACTGCTCCCATCAGTCCCATaGTGGAAGACTCTAACACAACTAAGCAGAAGAGCC +
Preference number: 3 (lower is better)
Translates to: WDKECPLLPSVP*WKTLTQLSRRA
Trigger: GGCTCTTCTGCTTAGTTGTGTTAGAGTCTTCCAGCATGGGACTGATGGGAGCAGTGGGCATTCTTTATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR GCA 72 bp AAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTaGCCAAGGTGTAGAGGAAGATCTGCCGGTCAGGCA +
Preference number: 3 (lower is better)
Translates to: KWRAKKPSSHRL*PRCRGRSAGQA
Trigger: TGCCTGACCGGCAGATCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR CCA 72 bp AGAAGACACACTTTGGTATTGAAACCGAGCGCTCACTaGCAGGTGTCGCAAAGATTAAGGCTTCAGGTGAGA +
Preference number: 3 (lower is better)
Translates to: RRHTLVLKPSAH*QVSQRLRLQVR
Trigger: TCTCACCTGAAGCCTTAATCTTTGCGACACCTGCCAGTGAGCGCTCGGTTTCAATACCAAAGTGTGTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CAA 90 bp CATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGATGGGCACTGCTGAGTaGACCGCAAACTCCACTCTT +
Preference number: 3 (lower is better)
Translates to: HDEWEENHGKWRAKKPSSMGTAE*TANSTL
Trigger: AAGAGTGGAGTTTGCGGTCAACTCAGCAGTGCCCAT...CGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CAA 90 bp AAGAAACCATCTTCGCATAGACTTTGCCCAAGGTGTAGAGGAAGATCTGCCGGTAGAAGAAGACACACTTaGGTATTGAAACCGAGCGCT +
Preference number: 3 (lower is better)
Translates to: KKPSSHRLCPRCRGRSAGRRRHT*VLKPSA
Trigger: AGCGCTCGGTTTCAATACCAAAGTGTGTCTTCTTCT...ACCGGCAGATCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGATGGTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CAA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGGCAAAGCAATACAACTaGAGGACTCCCTCCAAGATT +
Preference number: 3 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRAKQYN*RTPSKI
Trigger: AATCTTGGAGGGAGTCCTCAAGTTGTATTGCTTTGC...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR TCA 72 bp GGCAGAAACTTTCCTGGAGATGATGAGGGGTTGAGGTaGGTTGCTATGTGCTTTATTTTGGAGCCAGATAAA +
Preference number: 3 (lower is better)
Translates to: GRNFPGDDEGLR*VAMCFILEPDK
Trigger: TTTATCTGGCTCCAAAATAAAGCACATAGCAACTCACCTCAACCCCTCATCATCTCCAGGAAAGTTTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR CCA 72 bp GTTGAAACACATCCTTTGAGGAGGGGGAAAGTTGGGTaGAGCTGGGAACAGAAGTTTTATTTACAAGATCTC +
Preference number: 3 (lower is better)
Translates to: VETHPLRRGKVG*SWEQKFYLQDL
Trigger: GAGATCTTGTAAATAAAACTTCTGTTCCCAGCTCCACCCAACTTTCCCCCTCCTCAAAGGATGTGTTTCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CAA 90 bp CATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGGAACCAAATCAAAAGTaGGCTATGCCACAGCTTTGG +
Preference number: 3 (lower is better)
Translates to: HDEWEENHGKWRAKKPSSEPNQK*AMPQLW
Trigger: CCAAAGCTGTGGCATAGCCAACTTTTGATTTGGTTC...CGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR GCA 72 bp CTTGGCCTACTCTCTAGGACACAGGTCTTTCTTCTGTaGTACACCAACACTACAGAATACAAACTCATACAT +
Preference number: 3 (lower is better)
Translates to: LGLLSRTQVFLL*YTNTTEYKLIH
Trigger: ATGTATGAGTTTGTATTCTGTAGTGTTGGTGTAGCACAGAAGAAAGACCTGTGTCCTAGAGAGTAGGCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR-3UTR CAA 90 bp AATCCATACTCTGAATATGTATCAGAGCAGGTTAAAGACTACACTGCTACATACGTTGAAACACATCCTTaGAGGAGGGGGAAAGTTGGG +
Preference number: 3 (lower is better)
Translates to: NPYSEYVSEQVKDYTATYVETHP*RRGKVG
Trigger: CCCAACTTTCCCCCTCCTCAAAGGATGTGTTTCAAC...GTATGTAGCAGTGTAGTCTTTAACCTGCTCTGATACATATTCAGAGTATGGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR CCA 72 bp GGACATAAAACAATTGGCAAGAACCAAATCAAAAGTTaGCTATGCCACAGCTTTGGCAGAAACTTTCCTGGA +
Preference number: 3 (lower is better)
Translates to: GHKTIGKNQIKS*LCHSFGRNFPG
Trigger: TCCAGGAAAGTTTCTGCCAAAGCTGTGGCATAGCCAACTTTTGATTTGGTTCTTGCCAATTGTTTTATGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp CGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGTCACAGCCAGATGATCTCGTCCTGCTaGGCGGGCGGCAGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: RALAENVAGGQSFRGHSQMISSC*AGGSRA
Trigger: GGCGCGGCTGCCGCCCGCGCAGCAGGACGAGATCAT...CTGGCTGTGACCCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366663.10
ENST00000470540.5
CDS-3UTR GCA 90 bp CCGGACAGCTGCGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGTCGATGATCTCGTCCTaGTGCGCGGGCGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PDSCERWLRTSLGASLSGSMISS*CAGGSR
Trigger: GCGGCTGCCGCCCGCGCAGCAGGACGAGATCATCGA...CCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCGCAGCTGTCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366663.10
ENST00000470540.5
CDS-3UTR CCA 90 bp CGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGTCACAGCCAGGTGGTCTGGGCTCGCTaGCGGCGGTGCCGTTGCTCG +
Preference number: 4 (lower is better)
Translates to: RALAENVAGGQSFRGHSQVVWAR*RRCRCS
Trigger: CGAGCAACGGCACCGCCGCCAGCGAGCCCAGACCAC...CTGGCTGTGACCCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCGGACAGCTGCGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGAGCCCTGAGGGGAGCTaGCGCTTGCCCAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: PDSCERWLRTSLGASLSGSPEGS*RLPRLC
Trigger: GCACAGCCTGGGCAAGCGCCAGCTCCCCTCAGGGCT...CCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCGCAGCTGTCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp CGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGTCACAGCCAGTGCCTTGGGAGGACTTaGGGGCCTGGGAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RALAENVAGGQSFRGHSQCLGRT*GPGSPG
Trigger: CCCAGGGCTCCCAGGCCCTCAAGTCCTCCCAAGGCA...CTGGCTGTGACCCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp CCGGACAGCTGCGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGCGCCATACCGGGCTTaGGGCTCTGCTCAGACGCCT +
Preference number: 4 (lower is better)
Translates to: PDSCERWLRTSLGASLSGAPYRA*GSAQTP
Trigger: AGGCGTCTGAGCAGAGCCTCAAGCCCGGTATGGCGC...CCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCGCAGCTGTCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp GCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTGTCTGCCGGGGCCTGGCGCGGTaGGCTGCAGATAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: ASLGEVDHVVPLGSLGVCRGLAR*AADSRG
Trigger: CCCCCGGCTATCTGCAGCTCACCGCGCCAGGCCCCG...GCAGACACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427697.2
CDS-3UTR GCA 90 bp CCGGACAGCTGCGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGAGGGGGCAGCCTCGTaGAGTGCACTGCTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: PDSCERWLRTSLGASLSGEGAAS*SALLKA
Trigger: GGCCTTCAGCAGTGCACTGCACGAGGCTGCCCCCTC...CCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCGCAGCTGTCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGTCACAGCCAGAGCTTCCCCTCGAGCTaGGAGGGGGCAGCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: RALAENVAGGQSFRGHSQSFPSS*EGAASC
Trigger: GCACGAGGCTGCCCCCTCCCAGCTCGAGGGGAAGCT...CTGGCTGTGACCCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCGGACAGCTGCGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGACAGCTGCGAGCGCTaGCTGAGAACGTCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PDSCERWLRTSLGASLSGDSCER*LRTSLG
Trigger: CCCCAGCGACGTTCTCAGCCAGCGCTCGCAGCTGTC...CCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCGCAGCTGTCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCGGACAGCTGCGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGGCGACCTGGAAGGCTaGACCGGTTCGGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: PDSCERWLRTSLGASLSGGDLEG*TGSGHL
Trigger: CAGATGCCCCGAACCGGTCCAGCCTTCCAGGTCGCC...CCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCGCAGCTGTCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000427697.2
CDS-3UTR TCA 90 bp CGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGTCACAGCCAGGCGCCATACCGGGCTTaGGGCTCTGCTCAGACGCCT +
Preference number: 4 (lower is better)
Translates to: RALAENVAGGQSFRGHSQAPYRA*GSAQTP
Trigger: AGGCGTCTGAGCAGAGCCTCAAGCCCGGTATGGCGC...CTGGCTGTGACCCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCGGACAGCTGCGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGGAAGCTTTGGACAGTaGTCTGGGCTCGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: PDSCERWLRTSLGASLSGGSFGQ*SGLAGG
Trigger: GCCGCCAGCGAGCCCAGACCACTGTCCAAAGCTTCC...CCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCGCAGCTGTCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp GCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTGTCTGCGCTGCGAGCGCTGGCTaGGAACGTCGCTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: ASLGEVDHVVPLGSLGVCAASAG*ERRWGP
Trigger: TGGCCCCCAGCGACGTTCTCAGCCAGCGCTCGCAGC...GCAGACACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp CGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGTCACAGCCAGGCTCCTGACGGAGGGTaGTGGGCCTTTCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: RALAENVAGGQSFRGHSQAPDGG*WAFPPW
Trigger: CCAAGGTGGAAAGGCCCAGCACCCTCCGTCAGGAGC...CTGGCTGTGACCCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCGGACAGCTGCGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGAAGGCCTGGACAGGCTaGGGTCTCTCACGTTCGGTG +
Preference number: 4 (lower is better)
Translates to: PDSCERWLRTSLGASLSGKAWTG*GLSRSV
Trigger: CACCGAACGTGAGAGACCCCAGCCTGTCCAGGCCTT...CCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCGCAGCTGTCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCGGACAGCTGCGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGCACTGCTGAAGGCCTaGACAGGCTGGGGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: PDSCERWLRTSLGASLSGALLKA*TGWGLS
Trigger: TGAGAGACCCCAGCCTGTCCAGGCCTTCAGCAGTGC...CCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCGCAGCTGTCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCGGACAGCTGCGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGCTTCTCTGCTTTCTCTaGGCCCGTCCAGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: PDSCERWLRTSLGASLSGLLCFL*ARPGRW
Trigger: CCAGCGTCCTGGACGGGCCCAGAGAAAGCAGAGAAG...CCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCGCAGCTGTCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427697.2
CDS-3UTR CCA 90 bp CCGGACAGCTGCGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGGCGCTCTGAGAGGGTaGCCGTGGTTAATTCCCGGT +
Preference number: 4 (lower is better)
Translates to: PDSCERWLRTSLGASLSGGALRG*PWLIPG
Trigger: ACCGGGAATTAACCACGGCCACCCTCTCAGAGCGCC...CCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCGCAGCTGTCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp CGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGTCACAGCCAGCCTGACTCCTGTAGGTaGCCAGTCCGGGGAACAACC +
Preference number: 4 (lower is better)
Translates to: RALAENVAGGQSFRGHSQPDSCR*PVRGTT
Trigger: GGTTGTTCCCCGGACTGGGCACCTACAGGAGTCAGG...CTGGCTGTGACCCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp CCGGACAGCTGCGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGACGTGGCCACTTCTCTaGTTTCTCTGGGCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: PDSCERWLRTSLGASLSGTWPLL*FLWARP
Trigger: TGGACGGGCCCAGAGAAAGCAGAGAAGTGGCCACGT...CCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCGCAGCTGTCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427697.2
CDS-3UTR CCA 90 bp GCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTGTCTGCAAGCGCACCACCTTCTaGCCCGTGGGCCCGCGCAAG +
Preference number: 4 (lower is better)
Translates to: ASLGEVDHVVPLGSLGVCKRTTF*PVGPRK
Trigger: CTTGCGCGGGCCCACGGGCCAGAAGGTGGTGCGCTT...GCAGACACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366663.10
ENST00000470540.5
CDS-3UTR CCA 90 bp GCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTGTCTGCCCAGGGCGTCCAGGCTaGAGGACCTGCTGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: ASLGEVDHVVPLGSLGVCPGRPG*RTCCLG
Trigger: CCCAAGGCAGCAGGTCCTCCAGCCTGGACGCCCTGG...GCAGACACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp CCGGACAGCTGCGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGCGCTTGCCCAGGCTGTaGCAACTGGGATTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: PDSCERWLRTSLGASLSGRLPRL*QLGFLS
Trigger: GCTTAGAAATCCCAGTTGGCACAGCCTGGGCAAGCG...CCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCGCAGCTGTCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp GCTGATTCTGAGGATCCCTGTGTGAACAGTGCCGTTAGCCCTGAGGGGAGCTGGGTGGTCTGGGCTCGCTaGCGGCGGTGCCGTTGCTCG +
Preference number: 4 (lower is better)
Translates to: ADSEDPCVNSAVSPEGSWVVWAR*RRCRCS
Trigger: CGAGCAACGGCACCGCCGCCAGCGAGCCCAGACCAC...CCAGCTCCCCTCAGGGCTAACGGCACTGTTCACACAGGGATCCTCAGAATCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCAGCTCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCCTCCTCCTTCCTGGTaGGGCCCAGGGCGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PAPRDTAALTPRRSPWALPPPSW*GPGRPG
Trigger: GCCTGGACGCCCTGGGCCCCACCAGGAAGGAGGAGG...CAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TGGCAACATGGAGATGGCGCCATACCGGGCTTGAGGCTCTGCTCAGACGCCTCCCTAGGGGTCAGCGACTaGAACTCGGCCTCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: WQHGDGAIPGLRLCSDASLGVSD*NSASGP
Trigger: GGGGCCTGAGGCCGAGTTCCAGTCGCTGACCCCTAG...GGAGGCGTCTGAGCAGAGCCTCAAGCCCGGTATGGCGCCATCTCCATGTTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp GCAGCAGCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTCTAGGGGTCAGCGACTaGAACTCGGCCTCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: AAASLGEVDHVVPLGSLGLGVSD*NSASGP
Trigger: GGGGCCTGAGGCCGAGTTCCAGTCGCTGACCCCTAG...ACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGTCACAGCCAGACCACTGGGCAGCCTTaGTGTCTGCACCAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: RALAENVAGGQSFRGHSQTTGQP*CLHQLQ
Trigger: TTGGAGCTGGTGCAGACACCAAGGCTGCCCAGTGGT...CTGGCTGTGACCCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp CCAGCTCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCCAGGCACCGGTCGATaGTCTCGTCCTGCTGCGCGG +
Preference number: 4 (lower is better)
Translates to: PAPRDTAALTPRRSPWALPGTGR*SRPAAR
Trigger: CCGCGCAGCAGGACGAGATCATCGACCGGTGCCTGG...CAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366663.10
ENST00000470540.5
CDS-3UTR TCA 90 bp CGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGTCACAGCCAGTGGGCACTGCTGAGTTaGCCGCAAACTCCACTCTTC +
Preference number: 4 (lower is better)
Translates to: RALAENVAGGQSFRGHSQWALLS*PQTPLF
Trigger: GAAGAGTGGAGTTTGCGGTCAACTCAGCAGTGCCCA...CTGGCTGTGACCCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp CCAGCTCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGTGCGGCTCAGACGGGTaGCAGACCCCCGCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: PAPRDTAALTPRRSPWALCGSDG*QTPAVP
Trigger: GGGAACAGCGGGGGTCTGTCACCCGTCTGAGCCGCA...CAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp GCTGATTCTGAGGATCCCTGTGTGAACAGTGCCGTTAGCCCTGAGGGGAGCTGGTGCGGCTCAGACGGGTaGCAGACCCCCGCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: ADSEDPCVNSAVSPEGSWCGSDG*QTPAVP
Trigger: GGGAACAGCGGGGGTCTGTCACCCGTCTGAGCCGCA...CCAGCTCCCCTCAGGGCTAACGGCACTGTTCACACAGGGATCCTCAGAATCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp CGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGTCACAGCCAGGTCTCTCACGTTCGGTaGTCACGTTGGGAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: RALAENVAGGQSFRGHSQVSHVR*SRWEED
Trigger: GTCCTCTTCCCAACGTGAGCACCGAACGTGAGAGAC...CTGGCTGTGACCCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp CGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGTCACAGCCAGCGCTTGCCCAGGCTGTaGCAACTGGGATTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: RALAENVAGGQSFRGHSQRLPRL*QLGFLS
Trigger: GCTTAGAAATCCCAGTTGGCACAGCCTGGGCAAGCG...CTGGCTGTGACCCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCAGCTCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCCAGGGCGTCCAGGCTaGAGGACCTGCTGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PAPRDTAALTPRRSPWALPGRPG*RTCCLG
Trigger: CCCAAGGCAGCAGGTCCTCCAGCCTGGACGCCCTGG...CAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCAGCTCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGAGCCCTGAGGGGAGCTaGCGCTTGCCCAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: PAPRDTAALTPRRSPWALSPEGS*RLPRLC
Trigger: GCACAGCCTGGGCAAGCGCCAGCTCCCCTCAGGGCT...CAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp TCCGGGGTCACAGCCAGCATGCTGATGTCATGGCTGATAACATCACCCTCAATCAGCCGGGGAAGCGCGTaGGCTCCTCCGAGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: SGVTASMLMSWLITSPSISRGSA*APPSPR
Trigger: CCGGGGACTCGGAGGAGCTCACGCGCTTCCCCGGCT...GATTGAGGGTGATGTTATCAGCCATGACATCAGCATGCTGGCTGTGACCCCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366663.10
ENST00000470540.5
CDS-3UTR GCA 90 bp CCAGCTCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGGAAGCCCCGGACAGCTaGGAGCGCTGGCTGAGAACG +
Preference number: 4 (lower is better)
Translates to: PAPRDTAALTPRRSPWALEAPDS*ERWLRT
Trigger: CGTTCTCAGCCAGCGCTCGCAGCTGTCCGGGGCTTC...CAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp GCTGATTCTGAGGATCCCTGTGTGAACAGTGCCGTTAGCCCTGAGGGGAGCTGGCCGGGCTTGAGGCTCTaGTCAGACGCCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ADSEDPCVNSAVSPEGSWPGLRL*SDASCR
Trigger: CCTGCAGGAGGCGTCTGAGCAGAGCCTCAAGCCCGG...CCAGCTCCCCTCAGGGCTAACGGCACTGTTCACACAGGGATCCTCAGAATCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TGGCAACATGGAGATGGCGCCATACCGGGCTTGAGGCTCTGCTCAGACGCCTCCGCACTGCTGAAGGCCTaGACAGGCTGGGGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: WQHGDGAIPGLRLCSDASALLKA*TGWGLS
Trigger: TGAGAGACCCCAGCCTGTCCAGGCCTTCAGCAGTGC...GGAGGCGTCTGAGCAGAGCCTCAAGCCCGGTATGGCGCCATCTCCATGTTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp TCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGAGAGGACGCTGCTCCTaGCGGAGGGTGCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: SKRYCCSDTTQVSMGTAERGRCS*RRVLGL
Trigger: AAGGCCCAGCACCCTCCGTCAGGAGCAGCGTCCTCT...CTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp TCCGGGGTCACAGCCAGCATGCTGATGTCATGGCTGATAACATCACCCTCAATCGCTGCGAGCGCTGGCTaGGAACGTCGCTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SGVTASMLMSWLITSPSIAASAG*ERRWGP
Trigger: TGGCCCCCAGCGACGTTCTCAGCCAGCGCTCGCAGC...GATTGAGGGTGATGTTATCAGCCATGACATCAGCATGCTGGCTGTGACCCCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp GCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTGTCTGCCTCCATGGGCACTGCTaGGTTGACCGCAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: ASLGEVDHVVPLGSLGVCLHGHC*VDRKLH
Trigger: GTGGAGTTTGCGGTCAACTCAGCAGTGCCCATGGAG...GCAGACACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp GACACCACGCAGGTCTCCATGGGCACTGCTGAGTTGACCGCAAACTCCACTCTTGCGCCATACCGGGCTTaGGGCTCTGCTCAGACGCCT +
Preference number: 4 (lower is better)
Translates to: DTTQVSMGTAELTANSTLAPYRA*GSAQTP
Trigger: AGGCGTCTGAGCAGAGCCTCAAGCCCGGTATGGCGC...AAGAGTGGAGTTTGCGGTCAACTCAGCAGTGCCCATGGAGACCTGCGTGGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp GCAGCAGCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTCTGAGGATCCCTGTGTaGACAGTGCCGTTAGCCCTG +
Preference number: 4 (lower is better)
Translates to: AAASLGEVDHVVPLGSLGLRIPV*TVPLAL
Trigger: CAGGGCTAACGGCACTGTTCACACAGGGATCCTCAG...ACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp GCTGATTCTGAGGATCCCTGTGTGAACAGTGCCGTTAGCCCTGAGGGGAGCTGGGCCGGTCAGGCAGGATaGAGACCCACACAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: ADSEDPCVNSAVSPEGSWAGQAG*RPTQEP
Trigger: AGGCTCCTGTGTGGGTCTTCATCCTGCCTGACCGGC...CCAGCTCCCCTCAGGGCTAACGGCACTGTTCACACAGGGATCCTCAGAATCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp TCCGGGGTCACAGCCAGCATGCTGATGTCATGGCTGATAACATCACCCTCAATCGCTCGCTGGCGGCGGTaGCGTTGCTCGGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SGVTASMLMSWLITSPSIARWRR*RCSAPG
Trigger: TCCAGGAGCCGAGCAACGGCACCGCCGCCAGCGAGC...GATTGAGGGTGATGTTATCAGCCATGACATCAGCATGCTGGCTGTGACCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366663.10
ENST00000470540.5
CDS-3UTR GCA 90 bp TCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGGAGGGGGCAGCCTCGTaGAGTGCACTGCTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SKRYCCSDTTQVSMGTAEEGAAS*SALLKA
Trigger: GGCCTTCAGCAGTGCACTGCACGAGGCTGCCCCCTC...CTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp GACACCACGCAGGTCTCCATGGGCACTGCTGAGTTGACCGCAAACTCCACTCTTGAAGCCCCGGACAGCTaGGAGCGCTGGCTGAGAACG +
Preference number: 4 (lower is better)
Translates to: DTTQVSMGTAELTANSTLEAPDS*ERWLRT
Trigger: CGTTCTCAGCCAGCGCTCGCAGCTGTCCGGGGCTTC...AAGAGTGGAGTTTGCGGTCAACTCAGCAGTGCCCATGGAGACCTGCGTGGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp GCAGCAGCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTGAGAGACATGGCTTCTaGCAGAGAAGCCCCGGACAG +
Preference number: 4 (lower is better)
Translates to: AAASLGEVDHVVPLGSLGERHGF*QRSPGQ
Trigger: CTGTCCGGGGCTTCTCTGGCAGAAGCCATGTCTCTC...ACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp TGGCAACATGGAGATGGCGCCATACCGGGCTTGAGGCTCTGCTCAGACGCCTCCTCTACAACAGCCCCATaGCCTCCAGGCAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: WQHGDGAIPGLRLCSDASSTTAP*PPGRRW
Trigger: CCACCTTCTGCCTGGAGGGCATGGGGCTGTTGTAGA...GGAGGCGTCTGAGCAGAGCCTCAAGCCCGGTATGGCGCCATCTCCATGTTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp TCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGTCGGGGCCAGGTGGGTaGATGAAGTACCCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SKRYCCSDTTQVSMGTAESGPGG*MKYPVA
Trigger: GGCCACCGGGTACTTCATGCACCCACCTGGCCCCGA...CTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427697.2
CDS-3UTR CCA 90 bp GCAGCAGCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTGTTCGGTGCTCACGTTaGGAAGAGGACGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: AAASLGEVDHVVPLGSLGVRCSR*EEDAAP
Trigger: AGGAGCAGCGTCCTCTTCCCAACGTGAGCACCGAAC...ACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGTCACAGCCAGAGGGGGAAAGTTGGGTaGAGCTGGGAACAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: RALAENVAGGQSFRGHSQRGKVG*SWEQKF
Trigger: AAACTTCTGTTCCCAGCTCCACCCAACTTTCCCCCT...CTGGCTGTGACCCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp GCAGCAGCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTTCTGTTCCCTGGAAATaGCGTGAGGGTGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: AAASLGEVDHVVPLGSLGSVPWK*REGGGW
Trigger: CCAGCCTCCACCCTCACGCCATTTCCAGGGAACAGA...ACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp GCAGCAGCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTCCGCAGTCTGTTCCCTaGAAATGGCGTGAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: AAASLGEVDHVVPLGSLGPQSVP*KWREGG
Trigger: TCCACCCTCACGCCATTTCCAGGGAACAGACTGCGG...ACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp GCAGCAGCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTTTCCACTTCTGGTGGTaGTCAGGGCTGGGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: AAASLGEVDHVVPLGSLGFHFWW*SGLGKV
Trigger: GACCTTCCCCAGCCCTGACCACCACCAGAAGTGGAA...ACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp GCAGCAGCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTGCAGTGATGGCAACATaGAGATGGCGCCATACCGGG +
Preference number: 4 (lower is better)
Translates to: AAASLGEVDHVVPLGSLGAVMAT*RWRHTG
Trigger: CCCGGTATGGCGCCATCTCCATGTTGCCATCACTGC...ACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp GCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTGTCTGCGCAGTGATGGCAACATaGAGATGGCGCCATACCGGG +
Preference number: 4 (lower is better)
Translates to: ASLGEVDHVVPLGSLGVCAVMAT*RWRHTG
Trigger: CCCGGTATGGCGCCATCTCCATGTTGCCATCACTGC...GCAGACACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp GCAGCAGCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTCGCCATAGCGCCACGTaGCCACTTCTCTGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: AAASLGEVDHVVPLGSLGRHSAT*PLLCFL
Trigger: GAGAAAGCAGAGAAGTGGCCACGTGGCGCTATGGCG...ACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427697.2
3UTR CAA 72 bp GTGAACAGTGCCGTTAGCCCTGAGGGGAGCTGGCGCTaGCCCAGGCTGTGCCAACTGGGATTTCTAAGCTCC +
Preference number: 4 (lower is better)
Translates to: VNSAVSPEGSWR*PRLCQLGFLSS
Trigger: GGAGCTTAGAAATCCCAGTTGGCACAGCCTGGGCAAGCGCCAGCTCCCCTCAGGGCTAACGGCACTGTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp CGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGTCACAGCCAGATAGGGCGGAGATACTaGACTCCATCTGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: RALAENVAGGQSFRGHSQIGRRY*TPSDSL
Trigger: CAAAGAGTCAGATGGAGTTCAGTATCTCCGCCCTAT...CTGGCTGTGACCCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366663.10
ENST00000470540.5
CDS-3UTR TCA 90 bp TCCGGGGTCACAGCCAGCATGCTGATGTCATGGCTGATAACATCACCCTCAATCTGCCTTGGGAGGACTTaGGGGCCTGGGAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SGVTASMLMSWLITSPSICLGRT*GPGSPG
Trigger: CCCAGGGCTCCCAGGCCCTCAAGTCCTCCCAAGGCA...GATTGAGGGTGATGTTATCAGCCATGACATCAGCATGCTGGCTGTGACCCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp GCTGATTCTGAGGATCCCTGTGTGAACAGTGCCGTTAGCCCTGAGGGGAGCTGGCCCCATCGTCCTGCCTaGCATCAGGAGATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ADSEDPCVNSAVSPEGSWPHRPA*HQEMAA
Trigger: AGCTGCCATCTCCTGATGTCAGGCAGGACGATGGGG...CCAGCTCCCCTCAGGGCTAACGGCACTGTTCACACAGGGATCCTCAGAATCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp TCCTGTAGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAAGCTGCGAGCGCTGGCTaGGAACGTCGCTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SCRCPVRGTTNRSHKQQEAASAG*ERRWGP
Trigger: TGGCCCCCAGCGACGTTCTCAGCCAGCGCTCGCAGC...TTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCTACAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp GCAGCAGCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTGGCTGGCACATGATGTaGGAGACATGGCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: AAASLGEVDHVVPLGSLGGWHMM*ETWLLP
Trigger: TGGCAGAAGCCATGTCTCTCACATCATGTGCCAGCC...ACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp CCGGACAGCTGCGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGATGAGGGGTTGAGGTaGGTTGCTATGTGCTTTATT +
Preference number: 4 (lower is better)
Translates to: PDSCERWLRTSLGASLSGDEGLR*VAMCFI
Trigger: AATAAAGCACATAGCAACTCACCTCAACCCCTCATC...CCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCGCAGCTGTCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp AGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAGCTCGCTGGCGGCGGTaGCGTTGCTCGGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RCPVRGTTNRSHKQQELPARWRR*RCSAPG
Trigger: TCCAGGAGCCGAGCAACGGCACCGCCGCCAGCGAGC...TGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366663.10
ENST00000470540.5
CDS-3UTR GCA 90 bp TCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGGCTCCTGACGGAGGGTaGTGGGCCTTTCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: SKRYCCSDTTQVSMGTAEAPDGG*WAFPPW
Trigger: CCAAGGTGGAAAGGCCCAGCACCCTCCGTCAGGAGC...CTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp CCAGCTCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCCTGACTCCTGTAGGTaGCCAGTCCGGGGAACAACC +
Preference number: 4 (lower is better)
Translates to: PAPRDTAALTPRRSPWALPDSCR*PVRGTT
Trigger: GGTTGTTCCCCGGACTGGGCACCTACAGGAGTCAGG...CAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp GCTGATTCTGAGGATCCCTGTGTGAACAGTGCCGTTAGCCCTGAGGGGAGCTGGGCCACATCTGCCGTCTaGCCTGACTCCTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: ADSEDPCVNSAVSPEGSWATSAV*PDSCRC
Trigger: GCACCTACAGGAGTCAGGGCAGACGGCAGATGTGGC...CCAGCTCCCCTCAGGGCTAACGGCACTGTTCACACAGGGATCCTCAGAATCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGACCACCTTCTGGCCCGTaGGCCCGCGCAAGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: PVRGTTNRSHKQQELPRGPPSGP*ARASRG
Trigger: TCCCCGGCTTGCGCGGGCCCACGGGCCAGAAGGTGG...TCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366663.10
ENST00000470540.5
CDS-3UTR CCA 90 bp TCCTGTAGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAAGTGGTCTGGGCTCGCTaGCGGCGGTGCCGTTGCTCG +
Preference number: 4 (lower is better)
Translates to: SCRCPVRGTTNRSHKQQEVVWAR*RRCRCS
Trigger: CGAGCAACGGCACCGCCGCCAGCGAGCCCAGACCAC...TTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCTACAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp GCTGATTCTGAGGATCCCTGTGTGAACAGTGCCGTTAGCCCTGAGGGGAGCTGGAGGGCCTGGGAGCCCTaGGAAGCTTTGGACAGTGGT +
Preference number: 4 (lower is better)
Translates to: ADSEDPCVNSAVSPEGSWRAWEP*EALDSG
Trigger: ACCACTGTCCAAAGCTTCCCAGGGCTCCCAGGCCCT...CCAGCTCCCCTCAGGGCTAACGGCACTGTTCACACAGGGATCCTCAGAATCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCACCTCCTCCTTCCTGGTaGGGCCCAGGGCGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RCPVRGTTNRSHKQQELPPPPSW*GPGRPG
Trigger: GCCTGGACGCCCTGGGCCCCACCAGGAAGGAGGAGG...TGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp GACACCACGCAGGTCTCCATGGGCACTGCTGAGTTGACCGCAAACTCCACTCTTCCTGACGGAGGGTGCTaGGCCTTTCCACCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: DTTQVSMGTAELTANSTLPDGGC*AFPPWP
Trigger: AGGCCAAGGTGGAAAGGCCCAGCACCCTCCGTCAGG...AAGAGTGGAGTTTGCGGTCAACTCAGCAGTGCCCATGGAGACCTGCGTGGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp GCAGCAGCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTACCACGTTGTACCACTaGGCAGCCTTGGTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: AAASLGEVDHVVPLGSLGTTLYH*AALVSA
Trigger: TGCAGACACCAAGGCTGCCCAGTGGTACAACGTGGT...ACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGCCTCCAGGCAGAAGGTaGAGGCAGGTGGCCGCTGAT +
Preference number: 4 (lower is better)
Translates to: SKRYCCSDTTQVSMGTAEPPGRR*RQVAAD
Trigger: ATCAGCGGCCACCTGCCTCCACCTTCTGCCTGGAGG...CTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp CATCACCCTCAATCACCCACCAAAAGGAACCCATACGGTAAAAAGCGGAGGGGGCGTGCAGTGCACTGCTaGAGGCCTGGACAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HHPQSPTKRNPYGKKRRGRAVHC*RPGQAG
Trigger: CCCAGCCTGTCCAGGCCTTCAGCAGTGCACTGCACG...CCCCCTCCGCTTTTTACCGTATGGGTTCCTTTTGGTGGGTGATTGAGGGTGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp CCAGCTCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTCCATGGGCACTGCTaGGTTGACCGCAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: PAPRDTAALTPRRSPWALLHGHC*VDRKLH
Trigger: GTGGAGTTTGCGGTCAACTCAGCAGTGCCCATGGAG...CAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp GCTGATTCTGAGGATCCCTGTGTGAACAGTGCCGTTAGCCCTGAGGGGAGCTGGCTGAGGATCCCTGTGTaGACAGTGCCGTTAGCCCTG +
Preference number: 4 (lower is better)
Translates to: ADSEDPCVNSAVSPEGSWLRIPV*TVPLAL
Trigger: CAGGGCTAACGGCACTGTTCACACAGGGATCCTCAG...CCAGCTCCCCTCAGGGCTAACGGCACTGTTCACACAGGGATCCTCAGAATCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp GACACCACGCAGGTCTCCATGGGCACTGCTGAGTTGACCGCAAACTCCACTCTTGGAGGGGCTCCCAGATaGAACAGAGGCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: DTTQVSMGTAELTANSTLGGAPR*NRGWLL
Trigger: CAGCAACCAGCCTCTGTTTCATCTGGGAGCCCCTCC...AAGAGTGGAGTTTGCGGTCAACTCAGCAGTGCCCATGGAGACCTGCGTGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp TCCTGTAGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAATGCGGCTCAGACGGGTaGCAGACCCCCGCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: SCRCPVRGTTNRSHKQQECGSDG*QTPAVP
Trigger: GGGAACAGCGGGGGTCTGTCACCCGTCTGAGCCGCA...TTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCTACAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp AGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAGGCCAGGTGGGTGCATaGAGTACCCGGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RCPVRGTTNRSHKQQELPGQVGA*STRWPR
Trigger: CCTGGGCCACCGGGTACTTCATGCACCCACCTGGCC...TGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427697.2
CDS-3UTR GCA 90 bp AGCCTGTGTCCTCCAGGTCGTCCCTTCTTCCAAAAGCACAGCAAAGCAATACAAATGATCTCGTCCTGCTaGGCGGGCGGCAGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: SLCPPGRPFFQKHSKAIQMISSC*AGGSRA
Trigger: GGCGCGGCTGCCGCCCGCGCAGCAGGACGAGATCAT...TTGTATTGCTTTGCTGTGCTTTTGGAAGAAGGGACGACCTGGAGGACACAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366663.10
ENST00000470540.5
CDS-3UTR GCA 90 bp CCGGACAGCTGCGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGCAGGTCTTTCTTCTGTaGTACACCAACACTACAGAA +
Preference number: 4 (lower is better)
Translates to: PDSCERWLRTSLGASLSGQVFLL*YTNTTE
Trigger: TTCTGTAGTGTTGGTGTAGCACAGAAGAAAGACCTG...CCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCGCAGCTGTCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp AAGATTAAGGCTTCAGGTGAGAACGCAGTGATGGCAACATGGAGATGGCGCCATTGGCGGCGGTGCCGTTaGTCGGCTCCCGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: KIKASGENAVMATWRWRHWRRCR*SAPGSG
Trigger: ACCTGAGCCGGGAGCCGAGCAACGGCACCGCCGCCA...ATGGCGCCATCTCCATGTTGCCATCACTGCGTTCTCACCTGAAGCCTTAATCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427697.2
CDS-3UTR GCA 90 bp CGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGTCACAGCCAGGTTATCCAGGGTCTTTaGCTGGATAGTTCTGAACAC +
Preference number: 4 (lower is better)
Translates to: RALAENVAGGQSFRGHSQVIQGL*LDSSEH
Trigger: GTGTTCAGAACTATCCAGGCAAAGACCCTGGATAAC...CTGGCTGTGACCCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470540.5
CDS-3UTR CCA 90 bp CCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGACCTCCTCCTTCCTGGTaGGGCCCAGGGCGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PVRGTTNRSHKQQELPRGPPPSW*GPGRPG
Trigger: GCCTGGACGCCCTGGGCCCCACCAGGAAGGAGGAGG...TCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGTCACAGCCAGAGCATGCTGATGTCATaGCTGATAACATCACCCTCA +
Preference number: 4 (lower is better)
Translates to: RALAENVAGGQSFRGHSQSMLMS*LITSPS
Trigger: TGAGGGTGATGTTATCAGCCATGACATCAGCATGCT...CTGGCTGTGACCCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TCCGGGGTCACAGCCAGCATGCTGATGTCATGGCTGATAACATCACCCTCAATCGACAGCTGCGAGCGCTaGCTGAGAACGTCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SGVTASMLMSWLITSPSIDSCER*LRTSLG
Trigger: CCCCAGCGACGTTCTCAGCCAGCGCTCGCAGCTGTC...GATTGAGGGTGATGTTATCAGCCATGACATCAGCATGCTGGCTGTGACCCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp GCTGATTCTGAGGATCCCTGTGTGAACAGTGCCGTTAGCCCTGAGGGGAGCTGGTCTGTTCCCTGGAAATaGCGTGAGGGTGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ADSEDPCVNSAVSPEGSWSVPWK*REGGGW
Trigger: CCAGCCTCCACCCTCACGCCATTTCCAGGGAACAGA...CCAGCTCCCCTCAGGGCTAACGGCACTGTTCACACAGGGATCCTCAGAATCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp GCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTGTCTGCCGTCATGACGCAACCTaGCTAGCCCTTGGGATAAAG +
Preference number: 4 (lower is better)
Translates to: ASLGEVDHVVPLGSLGVCRHDAT*LALGIK
Trigger: CTTTATCCCAAGGGCTAGCCAGGTTGCGTCATGACG...GCAGACACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCGGACAGCTGCGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGAACCAAATCAAAAGTTaGCTATGCCACAGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: PDSCERWLRTSLGASLSGNQIKS*LCHSFG
Trigger: GCCAAAGCTGTGGCATAGCCAACTTTTGATTTGGTT...CCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCGCAGCTGTCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGCCCTGAGGGGAGCTaGCGCTTGCCCAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: RCPVRGTTNRSHKQQELPSPEGS*RLPRLC
Trigger: GCACAGCCTGGGCAAGCGCCAGCTCCCCTCAGGGCT...TGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp TCCTGTAGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAAAGAGGACGCTGCTCCTaGCGGAGGGTGCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: SCRCPVRGTTNRSHKQQERGRCS*RRVLGL
Trigger: AAGGCCCAGCACCCTCCGTCAGGAGCAGCGTCCTCT...TTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCTACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp CATCACCCTCAATCACCCACCAAAAGGAACCCATACGGTAAAAAGCGGAGGGGGGCCGGTCAGGCAGGATaGAGACCCACACAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: HHPQSPTKRNPYGKKRRGAGQAG*RPTQEP
Trigger: AGGCTCCTGTGTGGGTCTTCATCCTGCCTGACCGGC...CCCCCTCCGCTTTTTACCGTATGGGTTCCTTTTGGTGGGTGATTGAGGGTGATG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp GCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTGTCTGCACTGAATCCTTGAGCTaGATCCCAGGTGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: ASLGEVDHVVPLGSLGVCTESLS*IPGAET
Trigger: AGTCTCTGCACCTGGGATTCAGCTCAAGGATTCAGT...GCAGACACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp CATCACCCTCAATCACCCACCAAAAGGAACCCATACGGTAAAAAGCGGAGGGGGGGCAGCCTCGTGCAGTaGACTGCTGAAGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: HHPQSPTKRNPYGKKRRGGSLVQ*TAEGLD
Trigger: GTCCAGGCCTTCAGCAGTGCACTGCACGAGGCTGCC...CCCCCTCCGCTTTTTACCGTATGGGTTCCTTTTGGTGGGTGATTGAGGGTGATG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp GCTGATTCTGAGGATCCCTGTGTGAACAGTGCCGTTAGCCCTGAGGGGAGCTGGTCTTCCCCATCGTCCTaGCTGACATCAGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: ADSEDPCVNSAVSPEGSWSSPSS*LTSGDG
Trigger: GCCATCTCCTGATGTCAGGCAGGACGATGGGGAAGA...CCAGCTCCCCTCAGGGCTAACGGCACTGTTCACACAGGGATCCTCAGAATCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TCCTGTAGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTTGGACAGTGGTCTaGGCTCGCTGGCGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: SCRCPVRGTTNRSHKQQELWTVV*ARWRRC
Trigger: GCACCGCCGCCAGCGAGCCCAGACCACTGTCCAAAG...TTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCTACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TCCGGGGTCACAGCCAGCATGCTGATGTCATGGCTGATAACATCACCCTCAATCGGAAGCTTTGGACAGTaGTCTGGGCTCGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: SGVTASMLMSWLITSPSIGSFGQ*SGLAGG
Trigger: GCCGCCAGCGAGCCCAGACCACTGTCCAAAGCTTCC...GATTGAGGGTGATGTTATCAGCCATGACATCAGCATGCTGGCTGTGACCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TCCGGGGTCACAGCCAGCATGCTGATGTCATGGCTGATAACATCACCCTCAATCCCTGACGGAGGGTGCTaGGCCTTTCCACCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SGVTASMLMSWLITSPSIPDGGC*AFPPWP
Trigger: AGGCCAAGGTGGAAAGGCCCAGCACCCTCCGTCAGG...GATTGAGGGTGATGTTATCAGCCATGACATCAGCATGCTGGCTGTGACCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGCCTGACATCAGGAGATaGCAGCTTCCCCTCGAGCTG +
Preference number: 4 (lower is better)
Translates to: SKRYCCSDTTQVSMGTAEPDIRR*QLPLEL
Trigger: CAGCTCGAGGGGAAGCTGCCATCTCCTGATGTCAGG...CTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TCCTGTAGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAAGACAGCTGCGAGCGCTaGCTGAGAACGTCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SCRCPVRGTTNRSHKQQEDSCER*LRTSLG
Trigger: CCCCAGCGACGTTCTCAGCCAGCGCTCGCAGCTGTC...TTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCTACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCAGCTCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGACCACGTTGTACCACTaGGCAGCCTTGGTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PAPRDTAALTPRRSPWALTTLYH*AALVSA
Trigger: TGCAGACACCAAGGCTGCCCAGTGGTACAACGTGGT...CAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AAGAAACCATCTTCGCATAGACTTTGCCCAAGGTGTAGAGGAAGATCTGCCGGTGCTGGGCCCGGGGCCTaGCGCGGTGAGCTGCAGATA +
Preference number: 4 (lower is better)
Translates to: KKPSSHRLCPRCRGRSAGAGPGA*RGELQI
Trigger: TATCTGCAGCTCACCGCGCCAGGCCCCGGGCCCAGC...ACCGGCAGATCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGATGGTTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427697.2
CDS-3UTR TCA 90 bp AAGAAACCATCTTCGCATAGACTTTGCCCAAGGTGTAGAGGAAGATCTGCCGGTTGCCTTGGGAGGACTTaGGGGCCTGGGAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: KKPSSHRLCPRCRGRSAGCLGRT*GPGSPG
Trigger: CCCAGGGCTCCCAGGCCCTCAAGTCCTCCCAAGGCA...ACCGGCAGATCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGATGGTTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp GCAGCAGCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTTTGAAACACATCCTTTaGGGAGGGGGAAAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: AAASLGEVDHVVPLGSLGLKHIL*GGGKLG
Trigger: ACCCAACTTTCCCCCTCCTCAAAGGATGTGTTTCAA...ACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGCTGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp TCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGGAGATACTGCTGCTCTaGCACCACGCAGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SKRYCCSDTTQVSMGTAEEILLL*HHAGLH
Trigger: ATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTC...CTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp AGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAGCCGGTCAGGCAGGATaGAGACCCACACAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RCPVRGTTNRSHKQQELPAGQAG*RPTQEP
Trigger: AGGCTCCTGTGTGGGTCTTCATCCTGCCTGACCGGC...TGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp GCAGCAGCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTACAGAGGCTGGTTGCTaGTTTCTTGGGGGAACTTTT +
Preference number: 4 (lower is better)
Translates to: AAASLGEVDHVVPLGSLGTEAGC*FLGGTF
Trigger: AAAAGTTCCCCCAAGAAATCAGCAACCAGCCTCTGT...ACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGCTGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp TCCGGGGTCACAGCCAGCATGCTGATGTCATGGCTGATAACATCACCCTCAATCGGAGGGGCTCCCAGATaGAACAGAGGCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SGVTASMLMSWLITSPSIGGAPR*NRGWLL
Trigger: CAGCAACCAGCCTCTGTTTCATCTGGGAGCCCCTCC...GATTGAGGGTGATGTTATCAGCCATGACATCAGCATGCTGGCTGTGACCCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp CCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAGAGGGGGCAGCCTCGTaGAGTGCACTGCTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: PVRGTTNRSHKQQELPRGEGAAS*SALLKA
Trigger: GGCCTTCAGCAGTGCACTGCACGAGGCTGCCCCCTC...TCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp CCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAGAAGCCCCGGACAGCTaGGAGCGCTGGCTGAGAACG +
Preference number: 4 (lower is better)
Translates to: PVRGTTNRSHKQQELPRGEAPDS*ERWLRT
Trigger: CGTTCTCAGCCAGCGCTCGCAGCTGTCCGGGGCTTC...TCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp CCAGCTCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGTCCAAGAGATACTGCTaGTCTGACACCACGCAGGTC +
Preference number: 4 (lower is better)
Translates to: PAPRDTAALTPRRSPWALSKRYC*SDTTQV
Trigger: GACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA...CAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp GACACCACGCAGGTCTCCATGGGCACTGCTGAGTTGACCGCAAACTCCACTCTTGGCAGCCTTGGTGTCTaGACCAGCTCCAAGAGATAC +
Preference number: 4 (lower is better)
Translates to: DTTQVSMGTAELTANSTLGSLGV*TSSKRY
Trigger: GTATCTCTTGGAGCTGGTGCAGACACCAAGGCTGCC...AAGAGTGGAGTTTGCGGTCAACTCAGCAGTGCCCATGGAGACCTGCGTGGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp AGCCTGTGTCCTCCAGGTCGTCCCTTCTTCCAAAAGCACAGCAAAGCAATACAACCGGGCTTGAGGCTCTaGTCAGACGCCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SLCPPGRPFFQKHSKAIQPGLRL*SDASCR
Trigger: CCTGCAGGAGGCGTCTGAGCAGAGCCTCAAGCCCGG...TTGTATTGCTTTGCTGTGCTTTTGGAAGAAGGGACGACCTGGAGGACACAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGCCACCTTCTGGCCCGTaGGCCCGCGCAAGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRPPSGP*ARASRG
Trigger: TCCCCGGCTTGCGCGGGCCCACGGGCCAGAAGGTGG...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366663.10
ENST00000470540.5
CDS-3UTR CCA 90 bp AAGATTAAGGCTTCAGGTGAGAACGCAGTGATGGCAACATGGAGATGGCGCCATCTTTGGACAGTGGTCTaGGCTCGCTGGCGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: KIKASGENAVMATWRWRHLWTVV*ARWRRC
Trigger: GCACCGCCGCCAGCGAGCCCAGACCACTGTCCAAAG...ATGGCGCCATCTCCATGTTGCCATCACTGCGTTCTCACCTGAAGCCTTAATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AGCCTGTGTCCTCCAGGTCGTCCCTTCTTCCAAAAGCACAGCAAAGCAATACAACTTTGGACAGTGGTCTaGGCTCGCTGGCGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: SLCPPGRPFFQKHSKAIQLWTVV*ARWRRC
Trigger: GCACCGCCGCCAGCGAGCCCAGACCACTGTCCAAAG...TTGTATTGCTTTGCTGTGCTTTTGGAAGAAGGGACGACCTGGAGGACACAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGACTAGGGGTCAGCGACTaGAACTCGGCCTCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PVRGTTNRSHKQQELPRGLGVSD*NSASGP
Trigger: GGGGCCTGAGGCCGAGTTCCAGTCGCTGACCCCTAG...TCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TCCTGTAGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAATGGGCCTTTCCACCTTaGCCTCCCTGTCCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: SCRCPVRGTTNRSHKQQEWAFPP*PPCPSG
Trigger: CCCCGAAGGACAGGGAGGCCAAGGTGGAAAGGCCCA...TTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCTACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AAGAAACCATCTTCGCATAGACTTTGCCCAAGGTGTAGAGGAAGATCTGCCGGTAGCTTCCCCTCGAGCTaGGAGGGGGCAGCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: KKPSSHRLCPRCRGRSAGSFPSS*EGAASC
Trigger: GCACGAGGCTGCCCCCTCCCAGCTCGAGGGGAAGCT...ACCGGCAGATCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGATGGTTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGGAGGAGGGGGAAAGTTaGGTGGAGCTGGGAACAGAA +
Preference number: 4 (lower is better)
Translates to: SKRYCCSDTTQVSMGTAEEEGES*VELGTE
Trigger: TTCTGTTCCCAGCTCCACCCAACTTTCCCCCTCCTC...CTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CATCACCCTCAATCACCCACCAAAAGGAACCCATACGGTAAAAAGCGGAGGGGGCCACTCTTCCACTTCTaGTGGTGGTCAGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HHPQSPTKRNPYGKKRRGPLFHF*WWSGLG
Trigger: CCCCAGCCCTGACCACCACCAGAAGTGGAAGAGTGG...CCCCCTCCGCTTTTTACCGTATGGGTTCCTTTTGGTGGGTGATTGAGGGTGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGACCACGTTGTACCACTaGGCAGCCTTGGTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SKRYCCSDTTQVSMGTAETTLYH*AALVSA
Trigger: TGCAGACACCAAGGCTGCCCAGTGGTACAACGTGGT...CTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR CAA 72 bp TCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGTaGACCGCAAACTCCACTCTTCCACTTCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SDTTQVSMGTAE*TANSTLPLLVV
Trigger: CACCACCAGAAGTGGAAGAGTGGAGTTTGCGGTCAACTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp TCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGGGGACCGCTCAGCATTaGTCTTCCAGAATGACGCTT +
Preference number: 4 (lower is better)
Translates to: SKRYCCSDTTQVSMGTAEGTAQH*SSRMTL
Trigger: AAGCGTCATTCTGGAAGATCAATGCTGAGCGGTCCC...CTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp AGCCTGTGTCCTCCAGGTCGTCCCTTCTTCCAAAAGCACAGCAAAGCAATACAAGGGGAAGGTCCGTCATaGCGCAACCTGGCTAGCCCT +
Preference number: 4 (lower is better)
Translates to: SLCPPGRPFFQKHSKAIQGEGPS*RNLASP
Trigger: AGGGCTAGCCAGGTTGCGTCATGACGGACCTTCCCC...TTGTATTGCTTTGCTGTGCTTTTGGAAGAAGGGACGACCTGGAGGACACAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp CCAGCTCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGACTGAATCCTTGAGCTaGATCCCAGGTGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: PAPRDTAALTPRRSPWALTESLS*IPGAET
Trigger: AGTCTCTGCACCTGGGATTCAGCTCAAGGATTCAGT...CAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp AGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAGGAGGGGCTCCCAGATaGAACAGAGGCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: RCPVRGTTNRSHKQQELPGGAPR*NRGWLL
Trigger: CAGCAACCAGCCTCTGTTTCATCTGGGAGCCCCTCC...TGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAAGCTCGCTGGCGGCGGTaGCGTTGCTCGGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKARWRR*RCSAPG
Trigger: TCCAGGAGCCGAGCAACGGCACCGCCGCCAGCGAGC...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000470540.5
ENST00000523410.1
CDS-3UTR GCA 90 bp CCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGATGCTCAGACGCCTCCTaGAGGCTCACACGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PVRGTTNRSHKQQELPRGCSDAS*RLTRLR
Trigger: CCTGAGCCGTGTGAGCCTGCAGGAGGCGTCTGAGCA...TCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp TCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGAGAGTTATTGCTGGGTaGTGGGCCCCAGACGATACT +
Preference number: 4 (lower is better)
Translates to: SKRYCCSDTTQVSMGTAERVIAG*WAPDDT
Trigger: AGTATCGTCTGGGGCCCAGCACCCAGCAATAACTCT...CTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp GCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTGTCTGCTCTTCGCATAGACTTTaGCCAAGGTGTAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: ASLGEVDHVVPLGSLGVCSSHRL*PRCRGR
Trigger: TCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGA...GCAGACACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAAGTGGTCTGGGCTCGCTaGCGGCGGTGCCGTTGCTCG +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKVVWAR*RRCRCS
Trigger: CGAGCAACGGCACCGCCGCCAGCGAGCCCAGACCAC...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR CCA 90 bp TCCTGTAGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAAAGGGCCTGGGAGCCCTaGGAAGCTTTGGACAGTGGT +
Preference number: 4 (lower is better)
Translates to: SCRCPVRGTTNRSHKQQERAWEP*EALDSG
Trigger: ACCACTGTCCAAAGCTTCCCAGGGCTCCCAGGCCCT...TTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCTACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAACCTCCTCCTTCCTGGTaGGGCCCAGGGCGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKPPPSW*GPGRPG
Trigger: GCCTGGACGCCCTGGGCCCCACCAGGAAGGAGGAGG...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR CCA 90 bp AGCCTGTGTCCTCCAGGTCGTCCCTTCTTCCAAAAGCACAGCAAAGCAATACAATGGGCCTTTCCACCTTaGCCTCCCTGTCCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: SLCPPGRPFFQKHSKAIQWAFPP*PPCPSG
Trigger: CCCCGAAGGACAGGGAGGCCAAGGTGGAAAGGCCCA...TTGTATTGCTTTGCTGTGCTTTTGGAAGAAGGGACGACCTGGAGGACACAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CATCACCCTCAATCACCCACCAAAAGGAACCCATACGGTAAAAAGCGGAGGGGGCCTGACATCAGGAGATaGCAGCTTCCCCTCGAGCTG +
Preference number: 4 (lower is better)
Translates to: HHPQSPTKRNPYGKKRRGPDIRR*QLPLEL
Trigger: CAGCTCGAGGGGAAGCTGCCATCTCCTGATGTCAGG...CCCCCTCCGCTTTTTACCGTATGGGTTCCTTTTGGTGGGTGATTGAGGGTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CATCACCCTCAATCACCCACCAAAAGGAACCCATACGGTAAAAAGCGGAGGGGGCCGCAGTCTGTTCCCTaGAAATGGCGTGAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: HHPQSPTKRNPYGKKRRGPQSVP*KWREGG
Trigger: TCCACCCTCACGCCATTTCCAGGGAACAGACTGCGG...CCCCCTCCGCTTTTTACCGTATGGGTTCCTTTTGGTGGGTGATTGAGGGTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAGGTGGTGGTCAGGGCTaGGGAAGGTCCGTCATGACG +
Preference number: 4 (lower is better)
Translates to: PVRGTTNRSHKQQELPRGGGGQG*GRSVMT
Trigger: CGTCATGACGGACCTTCCCCAGCCCTGACCACCACC...TCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCACCACTCTTCCACTTCTaGTGGTGGTCAGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RCPVRGTTNRSHKQQELPPLFHF*WWSGLG
Trigger: CCCCAGCCCTGACCACCACCAGAAGTGGAAGAGTGG...TGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp GCTGATTCTGAGGATCCCTGTGTGAACAGTGCCGTTAGCCCTGAGGGGAGCTGGAAACCGAGCGCTCACTaGCAGGTGTCGCAAAGATTA +
Preference number: 4 (lower is better)
Translates to: ADSEDPCVNSAVSPEGSWKPSAH*QVSQRL
Trigger: TAATCTTTGCGACACCTGCCAGTGAGCGCTCGGTTT...CCAGCTCCCCTCAGGGCTAACGGCACTGTTCACACAGGGATCCTCAGAATCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGACCTCCAGGCAGAAGGTaGAGGCAGGTGGCCGCTGAT +
Preference number: 4 (lower is better)
Translates to: PVRGTTNRSHKQQELPRGPPGRR*RQVAAD
Trigger: ATCAGCGGCCACCTGCCTCCACCTTCTGCCTGGAGG...TCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AGCCTGTGTCCTCCAGGTCGTCCCTTCTTCCAAAAGCACAGCAAAGCAATACAACCTCCAGGCAGAAGGTaGAGGCAGGTGGCCGCTGAT +
Preference number: 4 (lower is better)
Translates to: SLCPPGRPFFQKHSKAIQPPGRR*RQVAAD
Trigger: ATCAGCGGCCACCTGCCTCCACCTTCTGCCTGGAGG...TTGTATTGCTTTGCTGTGCTTTTGGAAGAAGGGACGACCTGGAGGACACAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp TATACCCCAAGGATCCAAATGAGGTTTAGGGACATAAAACAATTGGCAAGAACCGCCGGTTCCCGCTCATaGCCGCCGAGCGCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: YTPRIQMRFRDIKQLARTAGSRS*PPSAKP
Trigger: CGGCTTCGCGCTCGGCGGTCATGAGCGGGAACCGGC...GGTTCTTGCCAATTGTTTTATGTCCCTAAACCTCATTTGGATCCTTGGGGTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366663.10
CDS-3UTR TCA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGCCAGGCACCGGTCGATaGTCTCGTCCTGCTGCGCGG +
Preference number: 4 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRPGTGR*SRPAAR
Trigger: CCGCGCAGCAGGACGAGATCATCGACCGGTGCCTGG...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366663.10
ENST00000470540.5
CDS-3UTR TCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAATGCCTTGGGAGGACTTaGGGGCCTGGGAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKCLGRT*GPGSPG
Trigger: CCCAGGGCTCCCAGGCCCTCAAGTCCTCCCAAGGCA...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR TCA 90 bp CATCACCCTCAATCACCCACCAAAAGGAACCCATACGGTAAAAAGCGGAGGGGGGAGATACTGCTGCTCTaGCACCACGCAGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: HHPQSPTKRNPYGKKRRGEILLL*HHAGLH
Trigger: ATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTC...CCCCCTCCGCTTTTTACCGTATGGGTTCCTTTTGGTGGGTGATTGAGGGTGATG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp TCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGGAGATGATGAGGGGTTaGGGTGAGTTGCTATGTGCT +
Preference number: 4 (lower is better)
Translates to: SKRYCCSDTTQVSMGTAEEMMRG*GELLCA
Trigger: AGCACATAGCAACTCACCTCAACCCCTCATCATCTC...CTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp AGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCACTGAGGATCCCTGTGTaGACAGTGCCGTTAGCCCTG +
Preference number: 4 (lower is better)
Translates to: RCPVRGTTNRSHKQQELPLRIPV*TVPLAL
Trigger: CAGGGCTAACGGCACTGTTCACACAGGGATCCTCAG...TGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp GACACCACGCAGGTCTCCATGGGCACTGCTGAGTTGACCGCAAACTCCACTCTTACTGAATCCTTGAGCTaGATCCCAGGTGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: DTTQVSMGTAELTANSTLTESLS*IPGAET
Trigger: AGTCTCTGCACCTGGGATTCAGCTCAAGGATTCAGT...AAGAGTGGAGTTTGCGGTCAACTCAGCAGTGCCCATGGAGACCTGCGTGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp GCTGATTCTGAGGATCCCTGTGTGAACAGTGCCGTTAGCCCTGAGGGGAGCTGGACAGAGGCTGGTTGCTaGTTTCTTGGGGGAACTTTT +
Preference number: 4 (lower is better)
Translates to: ADSEDPCVNSAVSPEGSWTEAGC*FLGGTF
Trigger: AAAAGTTCCCCCAAGAAATCAGCAACCAGCCTCTGT...CCAGCTCCCCTCAGGGCTAACGGCACTGTTCACACAGGGATCCTCAGAATCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp CCAGCTCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTCCCATCAGTCCCATaGTGGAAGACTCTAACACAA +
Preference number: 4 (lower is better)
Translates to: PAPRDTAALTPRRSPWALLPSVP*WKTLTQ
Trigger: TTGTGTTAGAGTCTTCCAGCATGGGACTGATGGGAG...CAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp AGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCATCTACAACAGCCCCATaGCCTCCAGGCAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: RCPVRGTTNRSHKQQELPSTTAP*PPGRRW
Trigger: CCACCTTCTGCCTGGAGGGCATGGGGCTGTTGTAGA...TGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp GCAGCAGCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTCAGGTCTTTCTTCTGTaGTACACCAACACTACAGAA +
Preference number: 4 (lower is better)
Translates to: AAASLGEVDHVVPLGSLGQVFLL*YTNTTE
Trigger: TTCTGTAGTGTTGGTGTAGCACAGAAGAAAGACCTG...ACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGCTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TCCTGTAGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACCGTTGCTCGGCTCCTaGATGGATAGGGCGGAGATA +
Preference number: 4 (lower is better)
Translates to: SCRCPVRGTTNRSHKQQEPLLGS*MDRAEI
Trigger: TATCTCCGCCCTATCCATCCAGGAGCCGAGCAACGG...TTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCTACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366663.10
ENST00000470540.5
CDS-3UTR CCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAACCAGGGCGTCCAGGCTaGAGGACCTGCTGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKPGRPG*RTCCLG
Trigger: CCCAAGGCAGCAGGTCCTCCAGCCTGGACGCCCTGG...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR CCA 90 bp TCCTGTAGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAAGTTCGGTGCTCACGTTaGGAAGAGGACGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SCRCPVRGTTNRSHKQQEVRCSR*EEDAAP
Trigger: AGGAGCAGCGTCCTCTTCCCAACGTGAGCACCGAAC...TTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCTACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAAAGGCCTGGACAGGCTaGGGTCTCTCACGTTCGGTG +
Preference number: 4 (lower is better)
Translates to: PVRGTTNRSHKQQELPRGKAWTG*GLSRSV
Trigger: CACCGAACGTGAGAGACCCCAGCCTGTCCAGGCCTT...TCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAAAGCTTCCCCTCGAGCTaGGAGGGGGCAGCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKSFPSS*EGAASC
Trigger: GCACGAGGCTGCCCCCTCCCAGCTCGAGGGGAAGCT...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR CCA 90 bp CATCACCCTCAATCACCCACCAAAAGGAACCCATACGGTAAAAAGCGGAGGGGGGAGGAGGGGGAAAGTTaGGTGGAGCTGGGAACAGAA +
Preference number: 4 (lower is better)
Translates to: HHPQSPTKRNPYGKKRRGEEGES*VELGTE
Trigger: TTCTGTTCCCAGCTCCACCCAACTTTCCCCCTCCTC...CCCCCTCCGCTTTTTACCGTATGGGTTCCTTTTGGTGGGTGATTGAGGGTGATG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp GACACCACGCAGGTCTCCATGGGCACTGCTGAGTTGACCGCAAACTCCACTCTTAACCTGGCTAGCCCTTaGGATAAAGAATGCCCACTG +
Preference number: 4 (lower is better)
Translates to: DTTQVSMGTAELTANSTLNLASP*DKECPL
Trigger: CAGTGGGCATTCTTTATCCCAAGGGCTAGCCAGGTT...AAGAGTGGAGTTTGCGGTCAACTCAGCAGTGCCCATGGAGACCTGCGTGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TCCTGTAGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTCTTCCACTTCTGGTaGTGGTCAGGGCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SCRCPVRGTTNRSHKQQELFHFW*WSGLGK
Trigger: CTTCCCCAGCCCTGACCACCACCAGAAGTGGAAGAG...TTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCTACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TCCTGTAGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAAACCACTGGGCAGCCTTaGTGTCTGCACCAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: SCRCPVRGTTNRSHKQQETTGQP*CLHQLQ
Trigger: TTGGAGCTGGTGCAGACACCAAGGCTGCCCAGTGGT...TTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCTACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAGCAGTGATGGCAACATaGAGATGGCGCCATACCGGG +
Preference number: 4 (lower is better)
Translates to: RCPVRGTTNRSHKQQELPAVMAT*RWRHTG
Trigger: CCCGGTATGGCGCCATCTCCATGTTGCCATCACTGC...TGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp GCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTGTCTGCTCCAGGGTCTTTGCCTaGATAGTTCTGAACACAAAA +
Preference number: 4 (lower is better)
Translates to: ASLGEVDHVVPLGSLGVCSRVFA*IVLNTK
Trigger: TTTTGTGTTCAGAACTATCCAGGCAAAGACCCTGGA...GCAGACACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470540.5
CDS-3UTR TCA 90 bp CATCACCCTCAATCACCCACCAAAAGGAACCCATACGGTAAAAAGCGGAGGGGGGGGACCGCTCAGCATTaGTCTTCCAGAATGACGCTT +
Preference number: 4 (lower is better)
Translates to: HHPQSPTKRNPYGKKRRGGTAQH*SSRMTL
Trigger: AAGCGTCATTCTGGAAGATCAATGCTGAGCGGTCCC...CCCCCTCCGCTTTTTACCGTATGGGTTCCTTTTGGTGGGTGATTGAGGGTGATG
53% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAAAGAGGACGCTGCTCCTaGCGGAGGGTGCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKRGRCS*RRVLGL
Trigger: AAGGCCCAGCACCCTCCGTCAGGAGCAGCGTCCTCT...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR TCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAACGTGCAGTGCACTGCTaGAGGCCTGGACAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKRAVHC*RPGQAG
Trigger: CCCAGCCTGTCCAGGCCTTCAGCAGTGCACTGCACG...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR TCA 90 bp AAGAAACCATCTTCGCATAGACTTTGCCCAAGGTGTAGAGGAAGATCTGCCGGTCCCCATCGTCCTGCCTaGCATCAGGAGATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: KKPSSHRLCPRCRGRSAGPHRPA*HQEMAA
Trigger: AGCTGCCATCTCCTGATGTCAGGCAGGACGATGGGG...ACCGGCAGATCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGATGGTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp GACACCACGCAGGTCTCCATGGGCACTGCTGAGTTGACCGCAAACTCCACTCTTTTGAAACACATCCTTTaGGGAGGGGGAAAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: DTTQVSMGTAELTANSTLLKHIL*GGGKLG
Trigger: ACCCAACTTTCCCCCTCCTCAAAGGATGTGTTTCAA...AAGAGTGGAGTTTGCGGTCAACTCAGCAGTGCCCATGGAGACCTGCGTGGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp CCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGACTCCATGGGCACTGCTaGGTTGACCGCAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: PVRGTTNRSHKQQELPRGLHGHC*VDRKLH
Trigger: GTGGAGTTTGCGGTCAACTCAGCAGTGCCCATGGAG...TCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAAGAGGGGGCAGCCTCGTaGAGTGCACTGCTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKEGAAS*SALLKA
Trigger: GGCCTTCAGCAGTGCACTGCACGAGGCTGCCCCCTC...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR GCA 90 bp AAGAAACCATCTTCGCATAGACTTTGCCCAAGGTGTAGAGGAAGATCTGCCGGTCCTGACTCCTGTAGGTaGCCAGTCCGGGGAACAACC +
Preference number: 4 (lower is better)
Translates to: KKPSSHRLCPRCRGRSAGPDSCR*PVRGTT
Trigger: GGTTGTTCCCCGGACTGGGCACCTACAGGAGTCAGG...ACCGGCAGATCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGATGGTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp TCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGCTCCCATCAGTCCCATaGTGGAAGACTCTAACACAA +
Preference number: 4 (lower is better)
Translates to: SKRYCCSDTTQVSMGTAELPSVP*WKTLTQ
Trigger: TTGTGTTAGAGTCTTCCAGCATGGGACTGATGGGAG...CTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp GACACCACGCAGGTCTCCATGGGCACTGCTGAGTTGACCGCAAACTCCACTCTTCTCCCATCAGTCCCATaGTGGAAGACTCTAACACAA +
Preference number: 4 (lower is better)
Translates to: DTTQVSMGTAELTANSTLLPSVP*WKTLTQ
Trigger: TTGTGTTAGAGTCTTCCAGCATGGGACTGATGGGAG...AAGAGTGGAGTTTGCGGTCAACTCAGCAGTGCCCATGGAGACCTGCGTGGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAAGCGCACCACCTTCTaGCCCGTGGGCCCGCGCAAG +
Preference number: 4 (lower is better)
Translates to: RNSLMMNGRKIMANGELRKRTTF*PVGPRK
Trigger: CTTGCGCGGGCCCACGGGCCAGAAGGTGGTGCGCTT...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366663.10
ENST00000470540.5
CDS-3UTR CCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAACTTTGGACAGTGGTCTaGGCTCGCTGGCGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKLWTVV*ARWRRC
Trigger: GCACCGCCGCCAGCGAGCCCAGACCACTGTCCAAAG...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR CCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAACTAGGGGTCAGCGACTaGAACTCGGCCTCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKLGVSD*NSASGP
Trigger: GGGGCCTGAGGCCGAGTTCCAGTCGCTGACCCCTAG...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR CCA 90 bp AGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCATCCATGGACTTGATCTaGCTAGGGGTCAGCGACTGG +
Preference number: 4 (lower is better)
Translates to: RCPVRGTTNRSHKQQELPSMDLI*LGVSDW
Trigger: CCAGTCGCTGACCCCTAGCCAGATCAAGTCCATGGA...TGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TCCTGTAGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAATCCATGGACTTGATCTaGCTAGGGGTCAGCGACTGG +
Preference number: 4 (lower is better)
Translates to: SCRCPVRGTTNRSHKQQESMDLI*LGVSDW
Trigger: CCAGTCGCTGACCCCTAGCCAGATCAAGTCCATGGA...TTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCTACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAGTTCGGTGCTCACGTTaGGAAGAGGACGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PVRGTTNRSHKQQELPRGVRCSR*EEDAAP
Trigger: AGGAGCAGCGTCCTCTTCCCAACGTGAGCACCGAAC...TCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAGCTTCCCCTCGAGCTaGGAGGGGGCAGCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: RNSLMMNGRKIMANGELRSFPSS*EGAASC
Trigger: GCACGAGGCTGCCCCCTCCCAGCTCGAGGGGAAGCT...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TCCTGTAGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAAGAGGAGGGGGAAAGTTaGGTGGAGCTGGGAACAGAA +
Preference number: 4 (lower is better)
Translates to: SCRCPVRGTTNRSHKQQEEEGES*VELGTE
Trigger: TTCTGTTCCCAGCTCCACCCAACTTTCCCCCTCCTC...TTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCTACAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAATGGCAACATGGAGATaGCGCCATACCGGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: RCPVRGTTNRSHKQQELPMATWR*RHTGLE
Trigger: CTCAAGCCCGGTATGGCGCCATCTCCATGTTGCCAT...TGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp GACACCACGCAGGTCTCCATGGGCACTGCTGAGTTGACCGCAAACTCCACTCTTGCTATGCCACAGCTTTaGCAGAAACTTTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: DTTQVSMGTAELTANSTLAMPQL*QKLSWR
Trigger: TCTCCAGGAAAGTTTCTGCCAAAGCTGTGGCATAGC...AAGAGTGGAGTTTGCGGTCAACTCAGCAGTGCCCATGGAGACCTGCGTGGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAACCCCTCGGGGCCAGGTaGGTGCATGAAGTACCCGGT +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKPLGAR*VHEVPG
Trigger: ACCGGGTACTTCATGCACCCACCTGGCCCCGAGGGG...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000427697.2
CDS-3UTR CCA 90 bp AGCCTGTGTCCTCCAGGTCGTCCCTTCTTCCAAAAGCACAGCAAAGCAATACAACCGGTTCGGGGCATCTaGTGCTCAAGGAAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: SLCPPGRPFFQKHSKAIQPVRGI*CSRKVS
Trigger: GCTGACTTTCCTTGAGCACCAGATGCCCCGAACCGG...TTGTATTGCTTTGCTGTGCTTTTGGAAGAAGGGACGACCTGGAGGACACAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427697.2
CDS-3UTR TCA 90 bp AAGAAACCATCTTCGCATAGACTTTGCCCAAGGTGTAGAGGAAGATCTGCCGGTGCGACGAGAAGTAAGTaGAGCGCTTTCGCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: KKPSSHRLCPRCRGRSAGATRSK*SAFAPG
Trigger: ACCGGGAGCGAAAGCGCTTCACTTACTTCTCGTCGC...ACCGGCAGATCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGATGGTTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366663.10
CDS-3UTR TCA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAGAGGACGCTGCTCCTaGCGGAGGGTGCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: RNSLMMNGRKIMANGELRRGRCS*RRVLGL
Trigger: AAGGCCCAGCACCCTCCGTCAGGAGCAGCGTCCTCT...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp TCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGCAAGACGACATTACTTaGGCTGACCTGTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: SKRYCCSDTTQVSMGTAEQDDIT*ADLCKL
Trigger: AAGTTTGCACAGGTCAGCTCAAGTAATGTCGTCTTG...CTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp AGCCTGTGTCCTCCAGGTCGTCCCTTCTTCCAAAAGCACAGCAAAGCAATACAAGGCTGGCACATGATGTaGGAGACATGGCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: SLCPPGRPFFQKHSKAIQGWHMM*ETWLLP
Trigger: TGGCAGAAGCCATGTCTCTCACATCATGTGCCAGCC...TTGTATTGCTTTGCTGTGCTTTTGGAAGAAGGGACGACCTGGAGGACACAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAATGGCGGCGGTGCCGTTaGTCGGCTCCTGGATGGATA +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKWRRCR*SAPGWI
Trigger: TATCCATCCAGGAGCCGAGCAACGGCACCGCCGCCA...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000470540.5
ENST00000523410.1
CDS-3UTR GCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAAGCTCCTGACGGAGGGTaGTGGGCCTTTCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKAPDGG*WAFPPW
Trigger: CCAAGGTGGAAAGGCCCAGCACCCTCCGTCAGGAGC...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR GCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAAGGCAGCCTCGTGCAGTaGACTGCTGAAGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKGSLVQ*TAEGLD
Trigger: GTCCAGGCCTTCAGCAGTGCACTGCACGAGGCTGCC...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR GCA 90 bp AGCCTGTGTCCTCCAGGTCGTCCCTTCTTCCAAAAGCACAGCAAAGCAATACAATCTTCCCCATCGTCCTaGCTGACATCAGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: SLCPPGRPFFQKHSKAIQSSPSS*LTSGDG
Trigger: GCCATCTCCTGATGTCAGGCAGGACGATGGGGAAGA...TTGTATTGCTTTGCTGTGCTTTTGGAAGAAGGGACGACCTGGAGGACACAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp TCCTGTAGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAATCCAAGAGATACTGCTaGTCTGACACCACGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SCRCPVRGTTNRSHKQQESKRYC*SDTTQV
Trigger: GACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA...TTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCTACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp AGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGCTCCAAGAGATACTaGTGCTCTGACACCACGCAG +
Preference number: 4 (lower is better)
Translates to: RCPVRGTTNRSHKQQELPSSKRY*CSDTTQ
Trigger: CTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCT...TGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAATGCTCAGACGCCTCCTaGAGGCTCACACGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKCSDAS*RLTRLR
Trigger: CCTGAGCCGTGTGAGCCTGCAGGAGGCGTCTGAGCA...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp GCTGATTCTGAGGATCCCTGTGTGAACAGTGCCGTTAGCCCTGAGGGGAGCTGGCAGGTCTTTCTTCTGTaGTACACCAACACTACAGAA +
Preference number: 4 (lower is better)
Translates to: ADSEDPCVNSAVSPEGSWQVFLL*YTNTTE
Trigger: TTCTGTAGTGTTGGTGTAGCACAGAAGAAAGACCTG...CCAGCTCCCCTCAGGGCTAACGGCACTGTTCACACAGGGATCCTCAGAATCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAAGGAAGCTTTGGACAGTaGTCTGGGCTCGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKGSFGQ*SGLAGG
Trigger: GCCGCCAGCGAGCCCAGACCACTGTCCAAAGCTTCC...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR CCA 90 bp TATACCCCAAGGATCCAAATGAGGTTTAGGGACATAAAACAATTGGCAAGAACCCCAGGGCGTCCAGGCTaGAGGACCTGCTGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: YTPRIQMRFRDIKQLARTPGRPG*RTCCLG
Trigger: CCCAAGGCAGCAGGTCCTCCAGCCTGGACGCCCTGG...GGTTCTTGCCAATTGTTTTATGTCCCTAAACCTCATTTGGATCCTTGGGGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AAGATTAAGGCTTCAGGTGAGAACGCAGTGATGGCAACATGGAGATGGCGCCATTCCATGGACTTGATCTaGCTAGGGGTCAGCGACTGG +
Preference number: 4 (lower is better)
Translates to: KIKASGENAVMATWRWRHSMDLI*LGVSDW
Trigger: CCAGTCGCTGACCCCTAGCCAGATCAAGTCCATGGA...ATGGCGCCATCTCCATGTTGCCATCACTGCGTTCTCACCTGAAGCCTTAATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAATGGGCCTTTCCACCTTaGCCTCCCTGTCCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKWAFPP*PPCPSG
Trigger: CCCCGAAGGACAGGGAGGCCAAGGTGGAAAGGCCCA...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR CCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAACCTGACGGAGGGTGCTaGGCCTTTCCACCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKPDGGC*AFPPWP
Trigger: AGGCCAAGGTGGAAAGGCCCAGCACCCTCCGTCAGG...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR CCA 90 bp TGGCAACATGGAGATGGCGCCATACCGGGCTTGAGGCTCTGCTCAGACGCCTCCAAAGTTGGGTGGAGCTaGGAACAGAAGTTTTATTTA +
Preference number: 4 (lower is better)
Translates to: WQHGDGAIPGLRLCSDASKVGWS*EQKFYL
Trigger: TAAATAAAACTTCTGTTCCCAGCTCCACCCAACTTT...GGAGGCGTCTGAGCAGAGCCTCAAGCCCGGTATGGCGCCATCTCCATGTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAATGGCAACATGGAGATaGCGCCATACCGGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: PVRGTTNRSHKQQELPRGMATWR*RHTGLE
Trigger: CTCAAGCCCGGTATGGCGCCATCTCCATGTTGCCAT...TCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAACCCCATCGTCCTGCCTaGCATCAGGAGATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKPHRPA*HQEMAA
Trigger: AGCTGCCATCTCCTGATGTCAGGCAGGACGATGGGG...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR TCA 90 bp CATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGGGGGAAGGTCCGTCATaGCGCAACCTGGCTAGCCCT +
Preference number: 4 (lower is better)
Translates to: HDEWEENHGKWRAKKPSSGEGPS*RNLASP
Trigger: AGGGCTAGCCAGGTTGCGTCATGACGGACCTTCCCC...CGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp CCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAAATGGATATAAAACCATCGATGATCTCGTCCTaGTGCGCGGGCGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PTGHISNKNFQEEMDIKPSMISS*CAGGSR
Trigger: GCGGCTGCCGCCCGCGCAGCAGGACGAGATCATCGA...TGGTTTTATATCCATTTCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366663.10
ENST00000470540.5
CDS-3UTR GCA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGATGGCGGCGGTGCCGTTaGTCGGCTCCTGGATGGATA +
Preference number: 4 (lower is better)
Translates to: RNSLMMNGRKIMANGELRWRRCR*SAPGWI
Trigger: TATCCATCCAGGAGCCGAGCAACGGCACCGCCGCCA...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366663.10
ENST00000470540.5
CDS-3UTR GCA 90 bp CATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGGCTCCTGACGGAGGGTaGTGGGCCTTTCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: HDEWEENHGKWRAKKPSSAPDGG*WAFPPW
Trigger: CCAAGGTGGAAAGGCCCAGCACCCTCCGTCAGGAGC...CGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp AAGAAACCATCTTCGCATAGACTTTGCCCAAGGTGTAGAGGAAGATCTGCCGGTGTCTCTCACGTTCGGTaGTCACGTTGGGAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: KKPSSHRLCPRCRGRSAGVSHVR*SRWEED
Trigger: GTCCTCTTCCCAACGTGAGCACCGAACGTGAGAGAC...ACCGGCAGATCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGATGGTTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp CATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGGGCAGCCTCGTGCAGTaGACTGCTGAAGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: HDEWEENHGKWRAKKPSSGSLVQ*TAEGLD
Trigger: GTCCAGGCCTTCAGCAGTGCACTGCACGAGGCTGCC...CGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp AGCCTGTGTCCTCCAGGTCGTCCCTTCTTCCAAAAGCACAGCAAAGCAATACAAAGCTCCAAGAGATACTaGTGCTCTGACACCACGCAG +
Preference number: 4 (lower is better)
Translates to: SLCPPGRPFFQKHSKAIQSSKRY*CSDTTQ
Trigger: CTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCT...TTGTATTGCTTTGCTGTGCTTTTGGAAGAAGGGACGACCTGGAGGACACAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGATGCTCAGACGCCTCCTaGAGGCTCACACGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RNSLMMNGRKIMANGELRCSDAS*RLTRLR
Trigger: CCTGAGCCGTGTGAGCCTGCAGGAGGCGTCTGAGCA...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp AAGATTAAGGCTTCAGGTGAGAACGCAGTGATGGCAACATGGAGATGGCGCCATAGAGTTATTGCTGGGTaGTGGGCCCCAGACGATACT +
Preference number: 4 (lower is better)
Translates to: KIKASGENAVMATWRWRHRVIAG*WAPDDT
Trigger: AGTATCGTCTGGGGCCCAGCACCCAGCAATAACTCT...ATGGCGCCATCTCCATGTTGCCATCACTGCGTTCTCACCTGAAGCCTTAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAAAGGGCCTGGGAGCCCTaGGAAGCTTTGGACAGTGGT +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKRAWEP*EALDSG
Trigger: ACCACTGTCCAAAGCTTCCCAGGGCTCCCAGGCCCT...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR CCA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGAAGGCCTGGACAGGCTaGGGTCTCTCACGTTCGGTG +
Preference number: 4 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRKAWTG*GLSRSV
Trigger: CACCGAACGTGAGAGACCCCAGCCTGTCCAGGCCTT...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAAAAGGCCTGGACAGGCTaGGGTCTCTCACGTTCGGTG +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKKAWTG*GLSRSV
Trigger: CACCGAACGTGAGAGACCCCAGCCTGTCCAGGCCTT...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR CCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAAGCACTGCTGAAGGCCTaGACAGGCTGGGGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKALLKA*TGWGLS
Trigger: TGAGAGACCCCAGCCTGTCCAGGCCTTCAGCAGTGC...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR CCA 90 bp AGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGGGGGAAAGTTGGGTaGAGCTGGGAACAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: RCPVRGTTNRSHKQQELPRGKVG*SWEQKF
Trigger: AAACTTCTGTTCCCAGCTCCACCCAACTTTCCCCCT...TGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAAACCGAGCGCTCACTaGCAGGTGTCGCAAAGATTA +
Preference number: 4 (lower is better)
Translates to: RCPVRGTTNRSHKQQELPKPSAH*QVSQRL
Trigger: TAATCTTTGCGACACCTGCCAGTGAGCGCTCGGTTT...TGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGGGCGCTCTGAGAGGGTaGCCGTGGTTAATTCCCGGT +
Preference number: 4 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRGALRG*PWLIPG
Trigger: ACCGGGAATTAACCACGGCCACCCTCTCAGAGCGCC...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp TCCTGTAGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAAATTGATCTTCCAGAATaGCGCTTCCTCCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SCRCPVRGTTNRSHKQQEIDLPE*RFLLLP
Trigger: AGGAAGGAGGAGGAAGCGTCATTCTGGAAGATCAAT...TTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCTACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp CCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAAATGGATATAAAACCACGTGCAGTGCACTGCTaGAGGCCTGGACAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PTGHISNKNFQEEMDIKPRAVHC*RPGQAG
Trigger: CCCAGCCTGTCCAGGCCTTCAGCAGTGCACTGCACG...TGGTTTTATATCCATTTCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGACCCCATCGTCCTGCCTaGCATCAGGAGATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: RNSLMMNGRKIMANGELRPHRPA*HQEMAA
Trigger: AGCTGCCATCTCCTGATGTCAGGCAGGACGATGGGG...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp TCCGGGGTCACAGCCAGCATGCTGATGTCATGGCTGATAACATCACCCTCAATCGATGAGGGGTTGAGGTaGGTTGCTATGTGCTTTATT +
Preference number: 4 (lower is better)
Translates to: SGVTASMLMSWLITSPSIDEGLR*VAMCFI
Trigger: AATAAAGCACATAGCAACTCACCTCAACCCCTCATC...GATTGAGGGTGATGTTATCAGCCATGACATCAGCATGCTGGCTGTGACCCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp AAGAAACCATCTTCGCATAGACTTTGCCCAAGGTGTAGAGGAAGATCTGCCGGTGGCCAAGGACTCAGGTaGGAATTGTGTCCACTCGTA +
Preference number: 4 (lower is better)
Translates to: KKPSSHRLCPRCRGRSAGGQGLR*ELCPLV
Trigger: TACGAGTGGACACAATTCTCACCTGAGTCCTTGGCC...ACCGGCAGATCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGATGGTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470540.5
CDS-3UTR GCA 90 bp TATACCCCAAGGATCCAAATGAGGTTTAGGGACATAAAACAATTGGCAAGAACCTGGCGGCGGTGCCGTTaGTCGGCTCCTGGATGGATA +
Preference number: 4 (lower is better)
Translates to: YTPRIQMRFRDIKQLARTWRRCR*SAPGWI
Trigger: TATCCATCCAGGAGCCGAGCAACGGCACCGCCGCCA...GGTTCTTGCCAATTGTTTTATGTCCCTAAACCTCATTTGGATCCTTGGGGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366663.10
ENST00000470540.5
CDS-3UTR GCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAAGAGAGACATGGCTTCTaGCAGAGAAGCCCCGGACAG +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKERHGF*QRSPGQ
Trigger: CTGTCCGGGGCTTCTCTGGCAGAAGCCATGTCTCTC...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAGCCACATCTGCCGTCTaGCCTGACTCCTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: RNSLMMNGRKIMANGELRATSAV*PDSCRC
Trigger: GCACCTACAGGAGTCAGGGCAGACGGCAGATGTGGC...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp CATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGGCCACATCTGCCGTCTaGCCTGACTCCTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: HDEWEENHGKWRAKKPSSATSAV*PDSCRC
Trigger: GCACCTACAGGAGTCAGGGCAGACGGCAGATGTGGC...CGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAAGTTCGGTGCTCACGTTaGGAAGAGGACGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKVRCSR*EEDAAP
Trigger: AGGAGCAGCGTCCTCTTCCCAACGTGAGCACCGAAC...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR CCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAACCTGACATCAGGAGATaGCAGCTTCCCCTCGAGCTG +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKPDIRR*QLPLEL
Trigger: CAGCTCGAGGGGAAGCTGCCATCTCCTGATGTCAGG...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR CCA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGCCGCAGTCTGTTCCCTaGAAATGGCGTGAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRPQSVP*KWREGG
Trigger: TCCACCCTCACGCCATTTCCAGGGAACAGACTGCGG...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AGCCTGTGTCCTCCAGGTCGTCCCTTCTTCCAAAAGCACAGCAAAGCAATACAAAACCTGGCTAGCCCTTaGGATAAAGAATGCCCACTG +
Preference number: 4 (lower is better)
Translates to: SLCPPGRPFFQKHSKAIQNLASP*DKECPL
Trigger: CAGTGGGCATTCTTTATCCCAAGGGCTAGCCAGGTT...TTGTATTGCTTTGCTGTGCTTTTGGAAGAAGGGACGACCTGGAGGACACAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TATACCCCAAGGATCCAAATGAGGTTTAGGGACATAAAACAATTGGCAAGAACCGGTGGTGGTCAGGGCTaGGGAAGGTCCGTCATGACG +
Preference number: 4 (lower is better)
Translates to: YTPRIQMRFRDIKQLARTGGGQG*GRSVMT
Trigger: CGTCATGACGGACCTTCCCCAGCCCTGACCACCACC...GGTTCTTGCCAATTGTTTTATGTCCCTAAACCTCATTTGGATCCTTGGGGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGTTCCACTTCTGGTGGTaGTCAGGGCTGGGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRFHFWW*SGLGKV
Trigger: GACCTTCCCCAGCCCTGACCACCACCAGAAGTGGAA...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAGCTATGCCACAGCTTTaGCAGAAACTTTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: RCPVRGTTNRSHKQQELPAMPQL*QKLSWR
Trigger: TCTCCAGGAAAGTTTCTGCCAAAGCTGTGGCATAGC...TGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp CCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAATTGATCTTCCAGAATaGCGCTTCCTCCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: PVRGTTNRSHKQQELPRGIDLPE*RFLLLP
Trigger: AGGAAGGAGGAGGAAGCGTCATTCTGGAAGATCAAT...TCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp AGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCACAAGACGACATTACTTaGGCTGACCTGTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: RCPVRGTTNRSHKQQELPQDDIT*ADLCKL
Trigger: AAGTTTGCACAGGTCAGCTCAAGTAATGTCGTCTTG...TGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAAGGCTGGCACATGATGTaGGAGACATGGCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKGWHMM*ETWLLP
Trigger: TGGCAGAAGCCATGTCTCTCACATCATGTGCCAGCC...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGCAGGTGAGAACGCAGTaGTGGCAACATGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRQVRTQ*WQHGDG
Trigger: GCCATCTCCATGTTGCCATCACTGCGTTCTCACCTG...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp CATCACCCTCAATCACCCACCAAAAGGAACCCATACGGTAAAAAGCGGAGGGGGCAAAGCAATACAACTTaGGGACTCCCTCCAAGATTT +
Preference number: 4 (lower is better)
Translates to: HHPQSPTKRNPYGKKRRGQSNTT*GLPPRF
Trigger: AAATCTTGGAGGGAGTCCTCAAGTTGTATTGCTTTG...CCCCCTCCGCTTTTTACCGTATGGGTTCCTTTTGGTGGGTGATTGAGGGTGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAAGTCTCTCACGTTCGGTaGTCACGTTGGGAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKVSHVR*SRWEED
Trigger: GTCCTCTTCCCAACGTGAGCACCGAACGTGAGAGAC...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR GCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAATCTTCCCCATCGTCCTaGCTGACATCAGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKSSPSS*LTSGDG
Trigger: GCCATCTCCTGATGTCAGGCAGGACGATGGGGAAGA...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR GCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAAGGCAGCCTTGGTGTCTaGACCAGCTCCAAGAGATAC +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKGSLGV*TSSKRY
Trigger: GTATCTCTTGGAGCTGGTGCAGACACCAAGGCTGCC...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp AATCCATACTCTGAATATGTATCAGAGCAGGTTAAAGACTACACTGCTACATACCCGGGCTTGAGGCTCTaGTCAGACGCCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NPYSEYVSEQVKDYTATYPGLRL*SDASCR
Trigger: CCTGCAGGAGGCGTCTGAGCAGAGCCTCAAGCCCGG...GTATGTAGCAGTGTAGTCTTTAACCTGCTCTGATACATATTCAGAGTATGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp AGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCATCTTCGCATAGACTTTaGCCAAGGTGTAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: RCPVRGTTNRSHKQQELPSSHRL*PRCRGR
Trigger: TCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGA...TGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGGTTCGGGGCATCTGGTaGTCAAGGAAAGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRVRGIW*SRKVSS
Trigger: GGAGCTGACTTTCCTTGAGCACCAGATGCCCCGAAC...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427697.2
CDS-3UTR CCA 90 bp CCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAAATGGATATAAAACCAGGAAGCTTTGGACAGTaGTCTGGGCTCGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: PTGHISNKNFQEEMDIKPGSFGQ*SGLAGG
Trigger: GCCGCCAGCGAGCCCAGACCACTGTCCAAAGCTTCC...TGGTTTTATATCCATTTCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAATCCATGGACTTGATCTaGCTAGGGGTCAGCGACTGG +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKSMDLI*LGVSDW
Trigger: CCAGTCGCTGACCCCTAGCCAGATCAAGTCCATGGA...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR CCA 90 bp CCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAAATGGATATAAAACCATGGGCCTTTCCACCTTaGCCTCCCTGTCCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: PTGHISNKNFQEEMDIKPWAFPP*PPCPSG
Trigger: CCCCGAAGGACAGGGAGGCCAAGGTGGAAAGGCCCA...TGGTTTTATATCCATTTCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAAATGGATATAAAACCACCTGACGGAGGGTGCTaGGCCTTTCCACCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PTGHISNKNFQEEMDIKPPDGGC*AFPPWP
Trigger: AGGCCAAGGTGGAAAGGCCCAGCACCCTCCGTCAGG...TGGTTTTATATCCATTTCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGACCTGACATCAGGAGATaGCAGCTTCCCCTCGAGCTG +
Preference number: 4 (lower is better)
Translates to: RNSLMMNGRKIMANGELRPDIRR*QLPLEL
Trigger: CAGCTCGAGGGGAAGCTGCCATCTCCTGATGTCAGG...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AAGAAACCATCTTCGCATAGACTTTGCCCAAGGTGTAGAGGAAGATCTGCCGGTAGGGGGAAAGTTGGGTaGAGCTGGGAACAGAAGTTT +
Preference number: 4 (lower is better)
Translates to: KKPSSHRLCPRCRGRSAGRGKVG*SWEQKF
Trigger: AAACTTCTGTTCCCAGCTCCACCCAACTTTCCCCCT...ACCGGCAGATCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGATGGTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AAGAAACCATCTTCGCATAGACTTTGCCCAAGGTGTAGAGGAAGATCTGCCGGTAACCTGGCTAGCCCTTaGGATAAAGAATGCCCACTG +
Preference number: 4 (lower is better)
Translates to: KKPSSHRLCPRCRGRSAGNLASP*DKECPL
Trigger: CAGTGGGCATTCTTTATCCCAAGGGCTAGCCAGGTT...ACCGGCAGATCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGATGGTTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CATCACCCTCAATCACCCACCAAAAGGAACCCATACGGTAAAAAGCGGAGGGGGAACCAAATCAAAAGTTaGCTATGCCACAGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: HHPQSPTKRNPYGKKRRGNQIKS*LCHSFG
Trigger: GCCAAAGCTGTGGCATAGCCAACTTTTGATTTGGTT...CCCCCTCCGCTTTTTACCGTATGGGTTCCTTTTGGTGGGTGATTGAGGGTGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAGGAGCTCAGAACTCTTaGCAGTTCGACGTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: PVRGTTNRSHKQQELPRGGAQNS*QFDVCK
Trigger: TTTGCAAACGTCGAACTGCCAAGAGTTCTGAGCTCC...TCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427697.2
CDS-3UTR TCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAAGGGACCGCTCAGCATTaGTCTTCCAGAATGACGCTT +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKGTAQH*SSRMTL
Trigger: AAGCGTCATTCTGGAAGATCAATGCTGAGCGGTCCC...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR TCA 90 bp CATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCAGGTGAGAACGCAGTaGTGGCAACATGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: HDEWEENHGKWRAKKPSSQVRTQ*WQHGDG
Trigger: GCCATCTCCATGTTGCCATCACTGCGTTCTCACCTG...CGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAACTCAGACAGATGAGATaGGTAGGAGTGGATGAGGGC +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKLRQMR*VGVDEG
Trigger: GCCCTCATCCACTCCTACTCATCTCATCTGTCTGAG...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000523410.1
CDS-3UTR GCA 90 bp AATCCATACTCTGAATATGTATCAGAGCAGGTTAAAGACTACACTGCTACATACGGCAGCCTCGTGCAGTaGACTGCTGAAGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: NPYSEYVSEQVKDYTATYGSLVQ*TAEGLD
Trigger: GTCCAGGCCTTCAGCAGTGCACTGCACGAGGCTGCC...GTATGTAGCAGTGTAGTCTTTAACCTGCTCTGATACATATTCAGAGTATGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp CATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGGGCAGCCTTGGTGTCTaGACCAGCTCCAAGAGATAC +
Preference number: 4 (lower is better)
Translates to: HDEWEENHGKWRAKKPSSGSLGV*TSSKRY
Trigger: GTATCTCTTGGAGCTGGTGCAGACACCAAGGCTGCC...CGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp AGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAGGGGTTGAGGTGAGTTaGTATGTGCTTTATTTTGGA +
Preference number: 4 (lower is better)
Translates to: RCPVRGTTNRSHKQQELPGVEVS*YVLYFG
Trigger: TCCAAAATAAAGCACATAGCAACTCACCTCAACCCC...TGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGACGCTTGCCCAGGCTGTaGCAACTGGGATTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: RNSLMMNGRKIMANGELRRLPRL*QLGFLS
Trigger: GCTTAGAAATCCCAGTTGGCACAGCCTGGGCAAGCG...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAAAGAGTTATTGCTGGGTaGTGGGCCCCAGACGATACT +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKRVIAG*WAPDDT
Trigger: AGTATCGTCTGGGGCCCAGCACCCAGCAATAACTCT...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AAGATTAAGGCTTCAGGTGAGAACGCAGTGATGGCAACATGGAGATGGCGCCATAGCATGCTGATGTCATaGCTGATAACATCACCCTCA +
Preference number: 4 (lower is better)
Translates to: KIKASGENAVMATWRWRHSMLMS*LITSPS
Trigger: TGAGGGTGATGTTATCAGCCATGACATCAGCATGCT...ATGGCGCCATCTCCATGTTGCCATCACTGCGTTCTCACCTGAAGCCTTAATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGACCATCAGTCCCATGCTaGAAGACTCTAACACAACTA +
Preference number: 4 (lower is better)
Translates to: PVRGTTNRSHKQQELPRGPSVPC*KTLTQL
Trigger: TAGTTGTGTTAGAGTCTTCCAGCATGGGACTGATGG...TCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGCGTCATGACGCAACCTaGCTAGCCCTTGGGATAAAG +
Preference number: 4 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRRHDAT*LALGIK
Trigger: CTTTATCCCAAGGGCTAGCCAGGTTGCGTCATGACG...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TATACCCCAAGGATCCAAATGAGGTTTAGGGACATAAAACAATTGGCAAGAACCCTCTTCCACTTCTGGTaGTGGTCAGGGCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: YTPRIQMRFRDIKQLARTLFHFW*WSGLGK
Trigger: CTTCCCCAGCCCTGACCACCACCAGAAGTGGAAGAG...GGTTCTTGCCAATTGTTTTATGTCCCTAAACCTCATTTGGATCCTTGGGGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAAATGGATATAAAACCACCACTCTTCCACTTCTaGTGGTGGTCAGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PTGHISNKNFQEEMDIKPPLFHF*WWSGLG
Trigger: CCCCAGCCCTGACCACCACCAGAAGTGGAAGAGTGG...TGGTTTTATATCCATTTCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TATACCCCAAGGATCCAAATGAGGTTTAGGGACATAAAACAATTGGCAAGAACCACCACTGGGCAGCCTTaGTGTCTGCACCAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: YTPRIQMRFRDIKQLARTTTGQP*CLHQLQ
Trigger: TTGGAGCTGGTGCAGACACCAAGGCTGCCCAGTGGT...GGTTCTTGCCAATTGTTTTATGTCCCTAAACCTCATTTGGATCCTTGGGGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAACCAAATCAAAAGTTaGCTATGCCACAGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: RCPVRGTTNRSHKQQELPNQIKS*LCHSFG
Trigger: GCCAAAGCTGTGGCATAGCCAACTTTTGATTTGGTT...TGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCTGAGAGGGTGGCCGTaGTTAATTCCCGGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: HDEWEENHGKWRAKKPSSLRGWP*LIPGSD
Trigger: GTCACTACCGGGAATTAACCACGGCCACCCTCTCAG...CGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp TCCTGTAGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACAACAATCCATACTCTaGATATGTATCAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SCRCPVRGTTNRSHKQQEQQSIL*ICIRAG
Trigger: ACCTGCTCTGATACATATTCAGAGTATGGATTGTTG...TTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCTACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp TATACCCCAAGGATCCAAATGAGGTTTAGGGACATAAAACAATTGGCAAGAACCCAGGTGAGAACGCAGTaGTGGCAACATGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: YTPRIQMRFRDIKQLARTQVRTQ*WQHGDG
Trigger: GCCATCTCCATGTTGCCATCACTGCGTTCTCACCTG...GGTTCTTGCCAATTGTTTTATGTCCCTAAACCTCATTTGGATCCTTGGGGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp CATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGGACACACTTTGGTATTaGAACCGAGCGCTCACTGGC +
Preference number: 4 (lower is better)
Translates to: HDEWEENHGKWRAKKPSSDTLWY*NRALTG
Trigger: GCCAGTGAGCGCTCGGTTTCAATACCAAAGTGTGTC...CGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp AAGAAACCATCTTCGCATAGACTTTGCCCAAGGTGTAGAGGAAGATCTGCCGGTGATGAGGGGTTGAGGTaGGTTGCTATGTGCTTTATT +
Preference number: 4 (lower is better)
Translates to: KKPSSHRLCPRCRGRSAGDEGLR*VAMCFI
Trigger: AATAAAGCACATAGCAACTCACCTCAACCCCTCATC...ACCGGCAGATCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGATGGTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGGAGATGATGAGGGGTTaGGGTGAGTTGCTATGTGCT +
Preference number: 4 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPREMMRG*GELLCA
Trigger: AGCACATAGCAACTCACCTCAACCCCTCATCATCTC...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAAGAGATGATGAGGGGTTaGGGTGAGTTGCTATGTGCT +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKEMMRG*GELLCA
Trigger: AGCACATAGCAACTCACCTCAACCCCTCATCATCTC...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp AAGATTAAGGCTTCAGGTGAGAACGCAGTGATGGCAACATGGAGATGGCGCCATCAAAGCAATACAACTTaGGGACTCCCTCCAAGATTT +
Preference number: 4 (lower is better)
Translates to: KIKASGENAVMATWRWRHQSNTT*GLPPRF
Trigger: AAATCTTGGAGGGAGTCCTCAAGTTGTATTGCTTTG...ATGGCGCCATCTCCATGTTGCCATCACTGCGTTCTCACCTGAAGCCTTAATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp TATACCCCAAGGATCCAAATGAGGTTTAGGGACATAAAACAATTGGCAAGAACCGTCTCTCACGTTCGGTaGTCACGTTGGGAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: YTPRIQMRFRDIKQLARTVSHVR*SRWEED
Trigger: GTCCTCTTCCCAACGTGAGCACCGAACGTGAGAGAC...GGTTCTTGCCAATTGTTTTATGTCCCTAAACCTCATTTGGATCCTTGGGGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp CCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAGGGGTTGAGGTGAGTTaGTATGTGCTTTATTTTGGA +
Preference number: 4 (lower is better)
Translates to: PVRGTTNRSHKQQELPRGGVEVS*YVLYFG
Trigger: TCCAAAATAAAGCACATAGCAACTCACCTCAACCCC...TCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp CCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAAATGGATATAAAACCATCTACAACAGCCCCATaGCCTCCAGGCAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: PTGHISNKNFQEEMDIKPSTTAP*PPGRRW
Trigger: CCACCTTCTGCCTGGAGGGCATGGGGCTGTTGTAGA...TGGTTTTATATCCATTTCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAAATGGATATAAAACCATTCCACTTCTGGTGGTaGTCAGGGCTGGGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: PTGHISNKNFQEEMDIKPFHFWW*SGLGKV
Trigger: GACCTTCCCCAGCCCTGACCACCACCAGAAGTGGAA...TGGTTTTATATCCATTTCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AAGAAACCATCTTCGCATAGACTTTGCCCAAGGTGTAGAGGAAGATCTGCCGGTGCACCAAGAAGAACTTaGAGGGAATATTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: KKPSSHRLCPRCRGRSAGAPRRT*REYWAC
Trigger: ACAAGCCCAATATTCCCTCCAAGTTCTTCTTGGTGC...ACCGGCAGATCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGATGGTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAAATAGGGCGGAGATACTaGACTCCATCTGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKIGRRY*TPSDSL
Trigger: CAAAGAGTCAGATGGAGTTCAGTATCTCCGCCCTAT...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000470540.5
ENST00000523410.1
CDS-3UTR TCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAAATTGATCTTCCAGAATaGCGCTTCCTCCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKIDLPE*RFLLLP
Trigger: AGGAAGGAGGAGGAAGCGTCATTCTGGAAGATCAAT...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR TCA 90 bp TATACCCCAAGGATCCAAATGAGGTTTAGGGACATAAAACAATTGGCAAGAACCGACACACTTTGGTATTaGAACCGAGCGCTCACTGGC +
Preference number: 4 (lower is better)
Translates to: YTPRIQMRFRDIKQLARTDTLWY*NRALTG
Trigger: GCCAGTGAGCGCTCGGTTTCAATACCAAAGTGTGTC...GGTTCTTGCCAATTGTTTTATGTCCCTAAACCTCATTTGGATCCTTGGGGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp CCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAAATGGATATAAAACCATCTTCCCCATCGTCCTaGCTGACATCAGGAGATGGC +
Preference number: 4 (lower is better)
Translates to: PTGHISNKNFQEEMDIKPSSPSS*LTSGDG
Trigger: GCCATCTCCTGATGTCAGGCAGGACGATGGGGAAGA...TGGTTTTATATCCATTTCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAAATAAAGAATGCCCACTaGTCCCATCAGTCCCATGCT +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKIKNAH*SHQSHA
Trigger: AGCATGGGACTGATGGGAGCAGTGGGCATTCTTTAT...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp TATACCCCAAGGATCCAAATGAGGTTTAGGGACATAAAACAATTGGCAAGAACCTCCAAGAGATACTGCTaGTCTGACACCACGCAGGTC +
Preference number: 4 (lower is better)
Translates to: YTPRIQMRFRDIKQLARTSKRYC*SDTTQV
Trigger: GACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA...GGTTCTTGCCAATTGTTTTATGTCCCTAAACCTCATTTGGATCCTTGGGGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp AAGAAACCATCTTCGCATAGACTTTGCCCAAGGTGTAGAGGAAGATCTGCCGGTATCAAAAGTTGGCTATaGCACAGCTTTGGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: KKPSSHRLCPRCRGRSAGIKSWL*HSFGRN
Trigger: GTTTCTGCCAAAGCTGTGGCATAGCCAACTTTTGAT...ACCGGCAGATCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGATGGTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAAAGTTGGGTGGAGCTaGGAACAGAAGTTTTATTTA +
Preference number: 4 (lower is better)
Translates to: RCPVRGTTNRSHKQQELPKVGWS*EQKFYL
Trigger: TAAATAAAACTTCTGTTCCCAGCTCCACCCAACTTT...TGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AATCCATACTCTGAATATGTATCAGAGCAGGTTAAAGACTACACTGCTACATACCTCTTCCACTTCTGGTaGTGGTCAGGGCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: NPYSEYVSEQVKDYTATYLFHFW*WSGLGK
Trigger: CTTCCCCAGCCCTGACCACCACCAGAAGTGGAAGAG...GTATGTAGCAGTGTAGTCTTTAACCTGCTCTGATACATATTCAGAGTATGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAAATGGATATAAAACCAATGGCAACATGGAGATaGCGCCATACCGGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: PTGHISNKNFQEEMDIKPMATWR*RHTGLE
Trigger: CTCAAGCCCGGTATGGCGCCATCTCCATGTTGCCAT...TGGTTTTATATCCATTTCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp CATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGATTGATCTTCCAGAATaGCGCTTCCTCCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: HDEWEENHGKWRAKKPSSIDLPE*RFLLLP
Trigger: AGGAAGGAGGAGGAAGCGTCATTCTGGAAGATCAAT...CGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGCAAGACGACATTACTTaGGCTGACCTGTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRQDDIT*ADLCKL
Trigger: AAGTTTGCACAGGTCAGCTCAAGTAATGTCGTCTTG...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAACAAGACGACATTACTTaGGCTGACCTGTGCAAACTT +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKQDDIT*ADLCKL
Trigger: AAGTTTGCACAGGTCAGCTCAAGTAATGTCGTCTTG...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR TCA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGATTGAAACACATCCTTTaGGGAGGGGGAAAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: RNSLMMNGRKIMANGELRLKHIL*GGGKLG
Trigger: ACCCAACTTTCCCCCTCCTCAAAGGATGTGTTTCAA...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp AATCCATACTCTGAATATGTATCAGAGCAGGTTAAAGACTACACTGCTACATACGAGATACTGCTGCTCTaGCACCACGCAGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: NPYSEYVSEQVKDYTATYEILLL*HHAGLH
Trigger: ATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTC...GTATGTAGCAGTGTAGTCTTTAACCTGCTCTGATACATATTCAGAGTATGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp CCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAAATGGATATAAAACCAGACACACTTTGGTATTaGAACCGAGCGCTCACTGGC +
Preference number: 4 (lower is better)
Translates to: PTGHISNKNFQEEMDIKPDTLWY*NRALTG
Trigger: GCCAGTGAGCGCTCGGTTTCAATACCAAAGTGTGTC...TGGTTTTATATCCATTTCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAACAGAGGCTGGTTGCTaGTTTCTTGGGGGAACTTTT +
Preference number: 4 (lower is better)
Translates to: RNSLMMNGRKIMANGELRTEAGC*FLGGTF
Trigger: AAAAGTTCCCCCAAGAAATCAGCAACCAGCCTCTGT...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAAAAGTTAGATCCGTCTTaGTCAGATTGCTCCCTCATC +
Preference number: 4 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKKLDPS*SDCSLI
Trigger: GATGAGGGAGCAATCTGATCAAGACGGATCTAACTT...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000523410.1
CDS-3UTR GCA 90 bp CATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGATAAAGAATGCCCACTaGTCCCATCAGTCCCATGCT +
Preference number: 4 (lower is better)
Translates to: HDEWEENHGKWRAKKPSSIKNAH*SHQSHA
Trigger: AGCATGGGACTGATGGGAGCAGTGGGCATTCTTTAT...CGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp CCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAAATGGATATAAAACCAAGCTCCAAGAGATACTaGTGCTCTGACACCACGCAG +
Preference number: 4 (lower is better)
Translates to: PTGHISNKNFQEEMDIKPSSKRY*CSDTTQ
Trigger: CTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCT...TGGTTTTATATCCATTTCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGTCTTCGCATAGACTTTaGCCAAGGTGTAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRSSHRL*PRCRGR
Trigger: TCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGA...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGCCATCAGTCCCATGCTaGAAGACTCTAACACAACTA +
Preference number: 4 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRPSVPC*KTLTQL
Trigger: TAGTTGTGTTAGAGTCTTCCAGCATGGGACTGATGG...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAGCTATGCCACAGCTTTaGCAGAAACTTTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: RNSLMMNGRKIMANGELRAMPQL*QKLSWR
Trigger: TCTCCAGGAAAGTTTCTGCCAAAGCTGTGGCATAGC...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
3UTR CAA 72 bp TCAATAATTCCTACAGCCCTCAGCACCAAGAAGAACTaGGAGGGAATATTGGGCTTGTTGAGAAAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: SIIPTALSTKKN*EGILGLLRKWE
Trigger: TTCCCACTTTCTCAACAAGCCCAATATTCCCTCCAAGTTCTTCTTGGTGCTGAGGGCTGTAGGAATTATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp AATCCATACTCTGAATATGTATCAGAGCAGGTTAAAGACTACACTGCTACATACGGGACCGCTCAGCATTaGTCTTCCAGAATGACGCTT +
Preference number: 4 (lower is better)
Translates to: NPYSEYVSEQVKDYTATYGTAQH*SSRMTL
Trigger: AAGCGTCATTCTGGAAGATCAATGCTGAGCGGTCCC...GTATGTAGCAGTGTAGTCTTTAACCTGCTCTGATACATATTCAGAGTATGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGAGCATGCTGATGTCATaGCTGATAACATCACCCTCA +
Preference number: 4 (lower is better)
Translates to: HDEWEENHGKWRAKKPSSSMLMS*LITSPS
Trigger: TGAGGGTGATGTTATCAGCCATGACATCAGCATGCT...CGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AATCCATACTCTGAATATGTATCAGAGCAGGTTAAAGACTACACTGCTACATACCGTCATGACGCAACCTaGCTAGCCCTTGGGATAAAG +
Preference number: 4 (lower is better)
Translates to: NPYSEYVSEQVKDYTATYRHDAT*LALGIK
Trigger: CTTTATCCCAAGGGCTAGCCAGGTTGCGTCATGACG...GTATGTAGCAGTGTAGTCTTTAACCTGCTCTGATACATATTCAGAGTATGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAGCACCAAGAAGAACTTaGAGGGAATATTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: RNSLMMNGRKIMANGELRAPRRT*REYWAC
Trigger: ACAAGCCCAATATTCCCTCCAAGTTCTTCTTGGTGC...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGCAACAATCCATACTCTaGATATGTATCAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRQQSIL*ICIRAG
Trigger: ACCTGCTCTGATACATATTCAGAGTATGGATTGTTG...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp AATCCATACTCTGAATATGTATCAGAGCAGGTTAAAGACTACACTGCTACATACGCAGAGTGCTCATCTTaGCAAGTTAGATCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: NPYSEYVSEQVKDYTATYAECSS*QVRSSS
Trigger: GGACGAGGATCTAACTTGGCAAGATGAGCACTCTGC...GTATGTAGCAGTGTAGTCTTTAACCTGCTCTGATACATATTCAGAGTATGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366663.10
ENST00000470540.5
CDS-3UTR GCA 90 bp CCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAAATGGATATAAAACCAATAAAGAATGCCCACTaGTCCCATCAGTCCCATGCT +
Preference number: 4 (lower is better)
Translates to: PTGHISNKNFQEEMDIKPIKNAH*SHQSHA
Trigger: AGCATGGGACTGATGGGAGCAGTGGGCATTCTTTAT...TGGTTTTATATCCATTTCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp TATACCCCAAGGATCCAAATGAGGTTTAGGGACATAAAACAATTGGCAAGAACCCCATCAGTCCCATGCTaGAAGACTCTAACACAACTA +
Preference number: 4 (lower is better)
Translates to: YTPRIQMRFRDIKQLARTPSVPC*KTLTQL
Trigger: TAGTTGTGTTAGAGTCTTCCAGCATGGGACTGATGG...GGTTCTTGCCAATTGTTTTATGTCCCTAAACCTCATTTGGATCCTTGGGGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp AATCCATACTCTGAATATGTATCAGAGCAGGTTAAAGACTACACTGCTACATACATAGGGCGGAGATACTaGACTCCATCTGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: NPYSEYVSEQVKDYTATYIGRRY*TPSDSL
Trigger: CAAAGAGTCAGATGGAGTTCAGTATCTCCGCCCTAT...GTATGTAGCAGTGTAGTCTTTAACCTGCTCTGATACATATTCAGAGTATGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366663.10
ENST00000470540.5
CDS-3UTR GCA 90 bp TATACCCCAAGGATCCAAATGAGGTTTAGGGACATAAAACAATTGGCAAGAACCATCAAAAGTTGGCTATaGCACAGCTTTGGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: YTPRIQMRFRDIKQLARTIKSWL*HSFGRN
Trigger: GTTTCTGCCAAAGCTGTGGCATAGCCAACTTTTGAT...GGTTCTTGCCAATTGTTTTATGTCCCTAAACCTCATTTGGATCCTTGGGGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAAATGGATATAAAACCAGCACCAAGAAGAACTTaGAGGGAATATTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: PTGHISNKNFQEEMDIKPAPRRT*REYWAC
Trigger: ACAAGCCCAATATTCCCTCCAAGTTCTTCTTGGTGC...TGGTTTTATATCCATTTCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR GCA 90 bp CCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAAATGGATATAAAACCAGGGGTTGAGGTGAGTTaGTATGTGCTTTATTTTGGA +
Preference number: 4 (lower is better)
Translates to: PTGHISNKNFQEEMDIKPGVEVS*YVLYFG
Trigger: TCCAAAATAAAGCACATAGCAACTCACCTCAACCCC...TGGTTTTATATCCATTTCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CCA 90 bp CATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGAAAGTTGGGTGGAGCTaGGAACAGAAGTTTTATTTA +
Preference number: 4 (lower is better)
Translates to: HDEWEENHGKWRAKKPSSKVGWS*EQKFYL
Trigger: TAAATAAAACTTCTGTTCCCAGCTCCACCCAACTTT...CGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR TCA 90 bp AATCCATACTCTGAATATGTATCAGAGCAGGTTAAAGACTACACTGCTACATACCAAAGCAATACAACTTaGGGACTCCCTCCAAGATTT +
Preference number: 4 (lower is better)
Translates to: NPYSEYVSEQVKDYTATYQSNTT*GLPPRF
Trigger: AAATCTTGGAGGGAGTCCTCAAGTTGTATTGCTTTG...GTATGTAGCAGTGTAGTCTTTAACCTGCTCTGATACATATTCAGAGTATGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS GCA 90 bp GGGGCGCGCGGCCCCACCAGGCACCGGTCGATGATCTCGTCCTGCTaGGCGGGCGGCAGCCGCGCCCACTCGGGCCCGTACTTCTCGCGG +
Preference number: 5 (lower is better)
Translates to: GARGPTRHRSMISSC*AGGSRAHSGPYFSR
Trigger: CCGCGAGAAGTACGGGCCCGAGTGGGCGCGGCTGCCGCCCGCGCAGCAGGACGAGATCATCGACCGGTGCCTGGTGGGGCCGCGCGCCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000470540.5
ENST00000522201.1
CDS GCA 90 bp GCCGGGGCGCGCGGCCCCACCAGGCACCGGTCGATGATCTCGTCCTaGTGCGCGGGCGGCAGCCGCGCCCACTCGGGCCCGTACTTCTCG +
Preference number: 5 (lower is better)
Translates to: AGARGPTRHRSMISS*CAGGSRAHSGPYFS
Trigger: CGAGAAGTACGGGCCCGAGTGGGCGCGGCTGCCGCCCGCGCAGCAGGACGAGATCATCGACCGGTGCCTGGTGGGGCCGCGCGCCCCGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000470540.5
ENST00000522201.1
CDS CCA 90 bp CGCGGTGAGCTGCAGATAGCCGGGGGCGCAGGGCAGCCCGGAGGCTaGAGGGCGACCTGGAAGGCTGGACCGGTTCGGGGCATCTGGTGC +
Preference number: 5 (lower is better)
Translates to: RGELQIAGGAGQPGG*RATWKAGPVRGIWC
Trigger: GCACCAGATGCCCCGAACCGGTCCAGCCTTCCAGGTCGCCCTCCAGCCTCCGGGCTGCCCTGCGCCCCCGGCTATCTGCAGCTCACCGCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427697.2
ENST00000521263.1
CDS CCA 90 bp TTCTCTGCTTTCTCTGGGCCCGTCCAGGACGCTGGGCCCGGGGCCTaGCGCGGTGAGCTGCAGATAGCCGGGGGCGCAGGGCAGCCCGGA +
Preference number: 5 (lower is better)
Translates to: FSAFSGPVQDAGPGA*RGELQIAGGAGQPG
Trigger: TCCGGGCTGCCCTGCGCCCCCGGCTATCTGCAGCTCACCGCGCCAGGCCCCGGGCCCAGCGTCCTGGACGGGCCCAGAGAAAGCAGAGAA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427697.2
ENST00000521263.1
CDS CCA 90 bp CTGGAGGACCTGCTGCCTTGGGAGGACTTGAGGGCCTGGGAGCCCTaGGAAGCTTTGGACAGTGGTCTGGGCTCGCTGGCGGCGGTGCCG +
Preference number: 5 (lower is better)
Translates to: LEDLLPWEDLRAWEP*EALDSGLGSLAAVP
Trigger: CGGCACCGCCGCCAGCGAGCCCAGACCACTGTCCAAAGCTTCCCAGGGCTCCCAGGCCCTCAAGTCCTCCCAAGGCAGCAGGTCCTCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000522201.1
ENST00000523410.1
CDS CCA 90 bp GGTAGCCGGCGTGTCCCTGAGTCCGCGCCCGGCGCTCTGAGAGGGTaGCCGTGGTTAATTCCCGGTAGTGACCGCCATAGCGCCACGTGG +
Preference number: 5 (lower is better)
Translates to: GSRRVPESAPGALRG*PWLIPGSDRHSATW
Trigger: CCACGTGGCGCTATGGCGGTCACTACCGGGAATTAACCACGGCCACCCTCTCAGAGCGCCGGGCGCGGACTCAGGGACACGCCGGCTACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427697.2
ENST00000470540.5
ENST00000521263.1
ENST00000522201.1
CDS-3UTR CAA 90 bp CGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGTCACAGCCAGCTGGGCCTTTCCACCTaGGCCTCCCTGTCCTTCGGG +
Preference number: 5 (lower is better)
Translates to: RALAENVAGGQSFRGHSQLGLST*ASLSFG
Trigger: CCCGAAGGACAGGGAGGCCAAGGTGGAAAGGCCCAG...CTGGCTGTGACCCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS CCA 90 bp TCATCTTGCCAAGTTAGATCCTCGTCCCCGAAGCGCACCACCTTCTaGCCCGTGGGCCCGCGCAAGCCGGGGAAGCGCGTGAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SSCQVRSSSPKRTTF*PVGPRKPGKRVSSS
Trigger: GGAGGAGCTCACGCGCTTCCCCGGCTTGCGCGGGCCCACGGGCCAGAAGGTGGTGCGCTTCGGGGACGAGGATCTAACTTGGCAAGATGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000470540.5
ENST00000522201.1
CDS CCA 90 bp GAAGAGGACGCTGCTCCTGACGGAGGGTGCTGGGCCTTTCCACCTTaGCCTCCCTGTCCTTCGGGGCAGGTTCCTGCCGGTAGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: EEDAAPDGGCWAFPP*PPCPSGQVPAGSRE
Trigger: CTCCCTGCTACCGGCAGGAACCTGCCCCGAAGGACAGGGAGGCCAAGGTGGAAAGGCCCAGCACCCTCCGTCAGGAGCAGCGTCCTCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS CCA 90 bp GAGGGGGCAGCCTCGTGCAGTGCACTGCTGAAGGCCTGGACAGGCTaGGGTCTCTCACGTTCGGTGCTCACGTTGGGAAGAGGACGCTGC +
Preference number: 5 (lower is better)
Translates to: EGAASCSALLKAWTG*GLSRSVLTLGRGRC
Trigger: GCAGCGTCCTCTTCCCAACGTGAGCACCGAACGTGAGAGACCCCAGCCTGTCCAGGCCTTCAGCAGTGCACTGCACGAGGCTGCCCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR CAA 90 bp CCGGACAGCTGCGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGCCCTTCTCCATGGACTaGATCTGGCTAGGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: PDSCERWLRTSLGASLSGPFSMD*IWLGVS
Trigger: GCTGACCCCTAGCCAGATCAAGTCCATGGAGAAGGG...CCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCGCAGCTGTCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS CCA 90 bp CCATCGTCCTGCCTGACATCAGGAGATGGCAGCTTCCCCTCGAGCTaGGAGGGGGCAGCCTCGTGCAGTGCACTGCTGAAGGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: PSSCLTSGDGSFPSS*EGAASCSALLKAWT
Trigger: TGTCCAGGCCTTCAGCAGTGCACTGCACGAGGCTGCCCCCTCCCAGCTCGAGGGGAAGCTGCCATCTCCTGATGTCAGGCAGGACGATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR CAA 90 bp CCGGACAGCTGCGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGCGGGACCGCTCAGCATaGATCTTCCAGAATGACGCT +
Preference number: 5 (lower is better)
Translates to: PDSCERWLRTSLGASLSGRDRSA*IFQNDA
Trigger: AGCGTCATTCTGGAAGATCAATGCTGAGCGGTCCCG...CCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCGCAGCTGTCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp CGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGTCACAGCCAGCCCTTCTCCATGGACTaGATCTGGCTAGGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: RALAENVAGGQSFRGHSQPFSMD*IWLGVS
Trigger: GCTGACCCCTAGCCAGATCAAGTCCATGGAGAAGGG...CTGGCTGTGACCCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp GCAGCAGCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTCTGGGCCTTTCCACCTaGGCCTCCCTGTCCTTCGGG +
Preference number: 5 (lower is better)
Translates to: AAASLGEVDHVVPLGSLGLGLST*ASLSFG
Trigger: CCCGAAGGACAGGGAGGCCAAGGTGGAAAGGCCCAG...ACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS TCA 90 bp GGTCTCTCACGTTCGGTGCTCACGTTGGGAAGAGGACGCTGCTCCTaGCGGAGGGTGCTGGGCCTTTCCACCTTGGCCTCCCTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: GLSRSVLTLGRGRCS*RRVLGLSTLASLSF
Trigger: GAAGGACAGGGAGGCCAAGGTGGAAAGGCCCAGCACCCTCCGTCAGGAGCAGCGTCCTCTTCCCAACGTGAGCACCGAACGTGAGAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR CAA 90 bp GCTGATTCTGAGGATCCCTGTGTGAACAGTGCCGTTAGCCCTGAGGGGAGCTGGGAGGGGAGCTGGCGCTaGCCCAGGCTGTGCCAACTG +
Preference number: 5 (lower is better)
Translates to: ADSEDPCVNSAVSPEGSWEGSWR*PRLCQL
Trigger: CAGTTGGCACAGCCTGGGCAAGCGCCAGCTCCCCTC...CCAGCTCCCCTCAGGGCTAACGGCACTGTTCACACAGGGATCCTCAGAATCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp CGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGTCACAGCCAGGTTGAAACACATCCTTaGAGGAGGGGGAAAGTTGGG +
Preference number: 5 (lower is better)
Translates to: RALAENVAGGQSFRGHSQVETHP*RRGKVG
Trigger: CCCAACTTTCCCCCTCCTCAAAGGATGTGTTTCAAC...CTGGCTGTGACCCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp GCTGATTCTGAGGATCCCTGTGTGAACAGTGCCGTTAGCCCTGAGGGGAGCTGGGGGAGGTGGACCACGTaGTACCACTGGGCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: ADSEDPCVNSAVSPEGSWGRWTT*YHWAAL
Trigger: CAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCC...CCAGCTCCCCTCAGGGCTAACGGCACTGTTCACACAGGGATCCTCAGAATCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp AGCCTGTGTCCTCCAGGTCGTCCCTTCTTCCAAAAGCACAGCAAAGCAATACAACTGGCGGCGGTGCCGTaGCTCGGCTCCCGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: SLCPPGRPFFQKHSKAIQLAAVP*LGSRLR
Trigger: CCTGAGCCGGGAGCCGAGCAACGGCACCGCCGCCAG...TTGTATTGCTTTGCTGTGCTTTTGGAAGAAGGGACGACCTGGAGGACACAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427697.2
CDS GCA 90 bp TGTGCAAACTTGGGTTCCGAGAACAGGGTGTCTTCCCCATCGTCCTaGCTGACATCAGGAGATGGCAGCTTCCCCTCGAGCTGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: CANLGSENRVSSPSS*LTSGDGSFPSSWEG
Trigger: CCCCTCCCAGCTCGAGGGGAAGCTGCCATCTCCTGATGTCAGGCAGGACGATGGGGAAGACACCCTGTTCTCGGAACCCAAGTTTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR CAA 90 bp GACACCACGCAGGTCTCCATGGGCACTGCTGAGTTGACCGCAAACTCCACTCTTGAGCCCTGGGAAGCTTaGGACAGTGGTCTGGGCTCG +
Preference number: 5 (lower is better)
Translates to: DTTQVSMGTAELTANSTLEPWEA*DSGLGS
Trigger: CGAGCCCAGACCACTGTCCAAAGCTTCCCAGGGCTC...AAGAGTGGAGTTTGCGGTCAACTCAGCAGTGCCCATGGAGACCTGCGTGGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp GCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTGTCTGCCTGACCTGTGCAAACTaGGGTTCCGAGAACAGGGTG +
Preference number: 5 (lower is better)
Translates to: ASLGEVDHVVPLGSLGVCLTCAN*GSENRV
Trigger: CACCCTGTTCTCGGAACCCAAGTTTGCACAGGTCAG...GCAGACACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp CCGGACAGCTGCGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGAACCAAATCAAAAGTaGGCTATGCCACAGCTTTGG +
Preference number: 5 (lower is better)
Translates to: PDSCERWLRTSLGASLSGEPNQK*AMPQLW
Trigger: CCAAAGCTGTGGCATAGCCAACTTTTGATTTGGTTC...CCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCGCAGCTGTCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp CGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGTCACAGCCAGAGCACCAAGAAGAACTaGGAGGGAATATTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: RALAENVAGGQSFRGHSQSTKKN*EGILGL
Trigger: CAAGCCCAATATTCCCTCCAAGTTCTTCTTGGTGCT...CTGGCTGTGACCCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp CGAGCGCTGGCTGAGAACGTCGCTGGGGGCCAGTCTTTCCGGGGTCACAGCCAGGCAAAGCAATACAACTaGAGGACTCCCTCCAAGATT +
Preference number: 5 (lower is better)
Translates to: RALAENVAGGQSFRGHSQAKQYN*RTPSKI
Trigger: AATCTTGGAGGGAGTCCTCAAGTTGTATTGCTTTGC...CTGGCTGTGACCCCGGAAAGACTGGCCCCCAGCGACGTTCTCAGCCAGCGCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp GACACCACGCAGGTCTCCATGGGCACTGCTGAGTTGACCGCAAACTCCACTCTTCCCTTCTCCATGGACTaGATCTGGCTAGGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: DTTQVSMGTAELTANSTLPFSMD*IWLGVS
Trigger: GCTGACCCCTAGCCAGATCAAGTCCATGGAGAAGGG...AAGAGTGGAGTTTGCGGTCAACTCAGCAGTGCCCATGGAGACCTGCGTGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp TCCGGGGTCACAGCCAGCATGCTGATGTCATGGCTGATAACATCACCCTCAATCCGTTCGGTGCTCACGTaGGGAAGAGGACGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SGVTASMLMSWLITSPSIRSVLT*GRGRCS
Trigger: GGAGCAGCGTCCTCTTCCCAACGTGAGCACCGAACG...GATTGAGGGTGATGTTATCAGCCATGACATCAGCATGCTGGCTGTGACCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp CCAGCTCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGACCTGTGCAAACTaGGGTTCCGAGAACAGGGTG +
Preference number: 5 (lower is better)
Translates to: PAPRDTAALTPRRSPWALLTCAN*GSENRV
Trigger: CACCCTGTTCTCGGAACCCAAGTTTGCACAGGTCAG...CAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp AGCCTGTGTCCTCCAGGTCGTCCCTTCTTCCAAAAGCACAGCAAAGCAATACAAGGCGCCATACCGGGCTaGAGGCTCTGCTCAGACGCC +
Preference number: 5 (lower is better)
Translates to: SLCPPGRPFFQKHSKAIQGAIPG*RLCSDA
Trigger: GGCGTCTGAGCAGAGCCTCAAGCCCGGTATGGCGCC...TTGTATTGCTTTGCTGTGCTTTTGGAAGAAGGGACGACCTGGAGGACACAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp CATCACCCTCAATCACCCACCAAAAGGAACCCATACGGTAAAAAGCGGAGGGGGTACCACTGGGCAGCCTaGGTGTCTGCACCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: HHPQSPTKRNPYGKKRRGYHWAA*VSAPAP
Trigger: TGGAGCTGGTGCAGACACCAAGGCTGCCCAGTGGTA...CCCCCTCCGCTTTTTACCGTATGGGTTCCTTTTGGTGGGTGATTGAGGGTGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp AAGAAACCATCTTCGCATAGACTTTGCCCAAGGTGTAGAGGAAGATCTGCCGGTGAGGGGAGCTGGCGCTaGCCCAGGCTGTGCCAACTG +
Preference number: 5 (lower is better)
Translates to: KKPSSHRLCPRCRGRSAGEGSWR*PRLCQL
Trigger: CAGTTGGCACAGCCTGGGCAAGCGCCAGCTCCCCTC...ACCGGCAGATCTTCCTCTACACCTTGGGCAAAGTCTATGCGAAGATGGTTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp CCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAGAGCCCTGGGAAGCTTaGGACAGTGGTCTGGGCTCG +
Preference number: 5 (lower is better)
Translates to: PVRGTTNRSHKQQELPRGEPWEA*DSGLGS
Trigger: CGAGCCCAGACCACTGTCCAAAGCTTCCCAGGGCTC...TCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp CCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGACGTTCGGTGCTCACGTaGGGAAGAGGACGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: PVRGTTNRSHKQQELPRGRSVLT*GRGRCS
Trigger: GGAGCAGCGTCCTCTTCCCAACGTGAGCACCGAACG...TCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp GCTGATTCTGAGGATCCCTGTGTGAACAGTGCCGTTAGCCCTGAGGGGAGCTGGACATTATTAGAGTTATaGCTGGGTGCTGGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: ADSEDPCVNSAVSPEGSWTLLEL*LGAGPQ
Trigger: CTGGGGCCCAGCACCCAGCAATAACTCTAATAATGT...CCAGCTCCCCTCAGGGCTAACGGCACTGTTCACACAGGGATCCTCAGAATCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp GCAGCAGCTTCCCTAGGGGAGGTGGACCACGTTGTACCACTGGGCAGCCTTGGTGCAAAGCAATACAACTaGAGGACTCCCTCCAAGATT +
Preference number: 5 (lower is better)
Translates to: AAASLGEVDHVVPLGSLGAKQYN*RTPSKI
Trigger: AATCTTGGAGGGAGTCCTCAAGTTGTATTGCTTTGC...ACCAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCCCTAGGGAAGCTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGCTGGCGGCGGTGCCGTaGCTCGGCTCCTGGATGGAT +
Preference number: 5 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRLAAVP*LGSWMD
Trigger: ATCCATCCAGGAGCCGAGCAACGGCACCGCCGCCAG...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366663.10
ENST00000470540.5
CDS-3UTR CAA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAACTGGCGGCGGTGCCGTaGCTCGGCTCCTGGATGGAT +
Preference number: 5 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKLAAVP*LGSWMD
Trigger: ATCCATCCAGGAGCCGAGCAACGGCACCGCCGCCAG...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000470540.5
ENST00000523410.1
CDS-3UTR CAA 90 bp CCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGATACCACTGGGCAGCCTaGGTGTCTGCACCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: PVRGTTNRSHKQQELPRGYHWAA*VSAPAP
Trigger: TGGAGCTGGTGCAGACACCAAGGCTGCCCAGTGGTA...TCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp TCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGAGACACACTTTGGTATaGAAACCGAGCGCTCACTGG +
Preference number: 5 (lower is better)
Translates to: SKRYCCSDTTQVSMGTAERHTLV*KPSAHW
Trigger: CCAGTGAGCGCTCGGTTTCAATACCAAAGTGTGTCT...CTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGACTGGCGGCGGTGCCGTaGCTCGGCTCCTGGATGGAT +
Preference number: 5 (lower is better)
Translates to: RNSLMMNGRKIMANGELRLAAVP*LGSWMD
Trigger: ATCCATCCAGGAGCCGAGCAACGGCACCGCCGCCAG...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366663.10
ENST00000470540.5
CDS-3UTR CAA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAACTGGGCCTTTCCACCTaGGCCTCCCTGTCCTTCGGG +
Preference number: 5 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKLGLST*ASLSFG
Trigger: CCCGAAGGACAGGGAGGCCAAGGTGGAAAGGCCCAG...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR CAA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAGGCGCCATACCGGGCTaGAGGCTCTGCTCAGACGCC +
Preference number: 5 (lower is better)
Translates to: RNSLMMNGRKIMANGELRGAIPG*RLCSDA
Trigger: GGCGTCTGAGCAGAGCCTCAAGCCCGGTATGGCGCC...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp GCTGATTCTGAGGATCCCTGTGTGAACAGTGCCGTTAGCCCTGAGGGGAGCTGGAGAAGAAGACACACTTaGGTATTGAAACCGAGCGCT +
Preference number: 5 (lower is better)
Translates to: ADSEDPCVNSAVSPEGSWRRRHT*VLKPSA
Trigger: AGCGCTCGGTTTCAATACCAAAGTGTGTCTTCTTCT...CCAGCTCCCCTCAGGGCTAACGGCACTGTTCACACAGGGATCCTCAGAATCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp CATCACCCTCAATCACCCACCAAAAGGAACCCATACGGTAAAAAGCGGAGGGGGAAGAGGCAGATCACCTaGGCCTACTCTCTAGGACAC +
Preference number: 5 (lower is better)
Translates to: HHPQSPTKRNPYGKKRRGKRQIT*AYSLGH
Trigger: GTGTCCTAGAGAGTAGGCCAAGGTGATCTGCCTCTT...CCCCCTCCGCTTTTTACCGTATGGGTTCCTTTTGGTGGGTGATTGAGGGTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp AAGATTAAGGCTTCAGGTGAGAACGCAGTGATGGCAACATGGAGATGGCGCCATCGGGACCGCTCAGCATaGATCTTCCAGAATGACGCT +
Preference number: 5 (lower is better)
Translates to: KIKASGENAVMATWRWRHRDRSA*IFQNDA
Trigger: AGCGTCATTCTGGAAGATCAATGCTGAGCGGTCCCG...ATGGCGCCATCTCCATGTTGCCATCACTGCGTTCTCACCTGAAGCCTTAATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGCGTTCGGTGCTCACGTaGGGAAGAGGACGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRRSVLT*GRGRCS
Trigger: GGAGCAGCGTCCTCTTCCCAACGTGAGCACCGAACG...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAACGTTCGGTGCTCACGTaGGGAAGAGGACGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKRSVLT*GRGRCS
Trigger: GGAGCAGCGTCCTCTTCCCAACGTGAGCACCGAACG...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR CAA 90 bp AGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAATGGGCACTGCTGAGTaGACCGCAAACTCCACTCTT +
Preference number: 5 (lower is better)
Translates to: RCPVRGTTNRSHKQQELPMGTAE*TANSTL
Trigger: AAGAGTGGAGTTTGCGGTCAACTCAGCAGTGCCCAT...TGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp TCCGGGGTCACAGCCAGCATGCTGATGTCATGGCTGATAACATCACCCTCAATCAGACACACTTTGGTATaGAAACCGAGCGCTCACTGG +
Preference number: 5 (lower is better)
Translates to: SGVTASMLMSWLITSPSIRHTLV*KPSAHW
Trigger: CCAGTGAGCGCTCGGTTTCAATACCAAAGTGTGTCT...GATTGAGGGTGATGTTATCAGCCATGACATCAGCATGCTGGCTGTGACCCCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp TCCAAGAGATACTGCTGCTCTGACACCACGCAGGTCTCCATGGGCACTGCTGAGAGAAGAAGACACACTTaGGTATTGAAACCGAGCGCT +
Preference number: 5 (lower is better)
Translates to: SKRYCCSDTTQVSMGTAERRRHT*VLKPSA
Trigger: AGCGCTCGGTTTCAATACCAAAGTGTGTCTTCTTCT...CTCAGCAGTGCCCATGGAGACCTGCGTGGTGTCAGAGCAGCAGTATCTCTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp TCCTGTAGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAAGGCTATGCCACAGCTTaGGCAGAAACTTTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: SCRCPVRGTTNRSHKQQEGYATA*AETFLE
Trigger: CTCCAGGAAAGTTTCTGCCAAAGCTGTGGCATAGCC...TTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCTACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp TCCTGTAGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAAAAGAGGCAGATCACCTaGGCCTACTCTCTAGGACAC +
Preference number: 5 (lower is better)
Translates to: SCRCPVRGTTNRSHKQQEKRQIT*AYSLGH
Trigger: GTGTCCTAGAGAGTAGGCCAAGGTGATCTGCCTCTT...TTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCTACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp GACACCACGCAGGTCTCCATGGGCACTGCTGAGTTGACCGCAAACTCCACTCTTGAGGGAATATTGGGCTaGTTGAGAAAGTGGGAAAGA +
Preference number: 5 (lower is better)
Translates to: DTTQVSMGTAELTANSTLEGILG*LRKWER
Trigger: TCTTTCCCACTTTCTCAACAAGCCCAATATTCCCTC...AAGAGTGGAGTTTGCGGTCAACTCAGCAGTGCCCATGGAGACCTGCGTGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp CATCACCCTCAATCACCCACCAAAAGGAACCCATACGGTAAAAAGCGGAGGGGGACATTATTAGAGTTATaGCTGGGTGCTGGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: HHPQSPTKRNPYGKKRRGTLLEL*LGAGPQ
Trigger: CTGGGGCCCAGCACCCAGCAATAACTCTAATAATGT...CCCCCTCCGCTTTTTACCGTATGGGTTCCTTTTGGTGGGTGATTGAGGGTGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp CATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGGGGAGGTGGACCACGTaGTACCACTGGGCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: HDEWEENHGKWRAKKPSSGRWTT*YHWAAL
Trigger: CAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCC...CGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp CCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAAATGGATATAAAACCAGGCGCCATACCGGGCTaGAGGCTCTGCTCAGACGCC +
Preference number: 5 (lower is better)
Translates to: PTGHISNKNFQEEMDIKPGAIPG*RLCSDA
Trigger: GGCGTCTGAGCAGAGCCTCAAGCCCGGTATGGCGCC...TGGTTTTATATCCATTTCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp AGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAACATTATTAGAGTTATaGCTGGGTGCTGGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: RCPVRGTTNRSHKQQELPTLLEL*LGAGPQ
Trigger: CTGGGGCCCAGCACCCAGCAATAACTCTAATAATGT...TGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS TCA 90 bp CTTGATGGTCTCAGCAGAATCAGGCACAGACTCAGCCCTGAACAATaGTTAGCTGTGTGGCCATGGGAAGATGACTCAGCCTTTTTGAGC +
Preference number: 5 (lower is better)
Translates to: LDGLSRIRHRLSPEQ*LAVWPWEDDSAFLS
Trigger: GCTCAAAAAGGCTGAGTCATCTTCCCATGGCCACACAGCTAATCATTGTTCAGGGCTGAGTCTGTGCCTGATTCTGCTGAGACCATCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519360.1
CDS-3UTR CAA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAACCCTTCTCCATGGACTaGATCTGGCTAGGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKPFSMD*IWLGVS
Trigger: GCTGACCCCTAGCCAGATCAAGTCCATGGAGAAGGG...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR CAA 90 bp CCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAGTTGAAACACATCCTTaGAGGAGGGGGAAAGTTGGG +
Preference number: 5 (lower is better)
Translates to: PVRGTTNRSHKQQELPRGVETHP*RRGKVG
Trigger: CCCAACTTTCCCCCTCCTCAAAGGATGTGTTTCAAC...TCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGATACCACTGGGCAGCCTaGGTGTCTGCACCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: RNSLMMNGRKIMANGELRYHWAA*VSAPAP
Trigger: TGGAGCTGGTGCAGACACCAAGGCTGCCCAGTGGTA...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp TATACCCCAAGGATCCAAATGAGGTTTAGGGACATAAAACAATTGGCAAGAACCGGGAGGTGGACCACGTaGTACCACTGGGCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: YTPRIQMRFRDIKQLARTGRWTT*YHWAAL
Trigger: CAAGGCTGCCCAGTGGTACAACGTGGTCCACCTCCC...GGTTCTTGCCAATTGTTTTATGTCCCTAAACCTCATTTGGATCCTTGGGGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp CCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAAGACACACTTTGGTATaGAAACCGAGCGCTCACTGG +
Preference number: 5 (lower is better)
Translates to: PVRGTTNRSHKQQELPRGRHTLV*KPSAHW
Trigger: CCAGTGAGCGCTCGGTTTCAATACCAAAGTGTGTCT...TCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp AATCCATACTCTGAATATGTATCAGAGCAGGTTAAAGACTACACTGCTACATACGAGGGGAGCTGGCGCTaGCCCAGGCTGTGCCAACTG +
Preference number: 5 (lower is better)
Translates to: NPYSEYVSEQVKDYTATYEGSWR*PRLCQL
Trigger: CAGTTGGCACAGCCTGGGCAAGCGCCAGCTCCCCTC...GTATGTAGCAGTGTAGTCTTTAACCTGCTCTGATACATATTCAGAGTATGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp CATCACCCTCAATCACCCACCAAAAGGAACCCATACGGTAAAAAGCGGAGGGGGGAGGGAATATTGGGCTaGTTGAGAAAGTGGGAAAGA +
Preference number: 5 (lower is better)
Translates to: HHPQSPTKRNPYGKKRRGEGILG*LRKWER
Trigger: TCTTTCCCACTTTCTCAACAAGCCCAATATTCCCTC...CCCCCTCCGCTTTTTACCGTATGGGTTCCTTTTGGTGGGTGATTGAGGGTGATG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp TCCTGTAGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAAAGCACCAAGAAGAACTaGGAGGGAATATTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: SCRCPVRGTTNRSHKQQESTKKN*EGILGL
Trigger: CAAGCCCAATATTCCCTCCAAGTTCTTCTTGGTGCT...TTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCTACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp AGCCTGTGTCCTCCAGGTCGTCCCTTCTTCCAAAAGCACAGCAAAGCAATACAAAGGAGCTCAGAACTCTaGGCAGTTCGACGTTTGCAA +
Preference number: 5 (lower is better)
Translates to: SLCPPGRPFFQKHSKAIQRSSEL*AVRRLQ
Trigger: TTGCAAACGTCGAACTGCCAAGAGTTCTGAGCTCCT...TTGTATTGCTTTGCTGTGCTTTTGGAAGAAGGGACGACCTGGAGGACACAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427697.2
CDS GCA 90 bp CTTTCCCCAACCCAAGGAGCTCAGAACTCTTGGCAGTTCGACGTTTaGAAACAAACCAAAGAGGAGCAGAAAGTTTTCAGACTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: LSPTQGAQNSWQFDV*KQTKEEQKVFRLRG
Trigger: GCCTCTGAGTCTGAAAACTTTCTGCTCCTCTTTGGTTTGTTTGCAAACGTCGAACTGCCAAGAGTTCTGAGCTCCTTGGGTTGGGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521263.1
CDS-3UTR CAA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAACGGGACCGCTCAGCATaGATCTTCCAGAATGACGCT +
Preference number: 5 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKRDRSA*IFQNDA
Trigger: AGCGTCATTCTGGAAGATCAATGCTGAGCGGTCCCG...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR CAA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAACTGACCTGTGCAAACTaGGGTTCCGAGAACAGGGTG +
Preference number: 5 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKLTCAN*GSENRV
Trigger: CACCCTGTTCTCGGAACCCAAGTTTGCACAGGTCAG...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS-3UTR CAA 90 bp TCCTGTAGGTGCCCAGTCCGGGGAACAACCAACAGGTCACATAAGCAACAAGAAAGAAGAAGACACACTTaGGTATTGAAACCGAGCGCT +
Preference number: 5 (lower is better)
Translates to: SCRCPVRGTTNRSHKQQERRRHT*VLKPSA
Trigger: AGCGCTCGGTTTCAATACCAAAGTGTGTCTTCTTCT...TTCTTGTTGCTTATGTGACCTGTTGGTTGTTCCCCGGACTGGGCACCTACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp AATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGCATAGACTTTGCCCAAGGGGCTATGCCACAGCTTaGGCAGAAACTTTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: NHGKWRAKKPSSHRLCPRGYATA*AETFLE
Trigger: CTCCAGGAAAGTTTCTGCCAAAGCTGTGGCATAGCC...CCTTGGGCAAAGTCTATGCGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAATCCGTCTTGATCAGATaGCTCCCTCATCTTTCCCGC +
Preference number: 5 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKSVLIR*LPHLSR
Trigger: GCGGGAAAGATGAGGGAGCAATCTGATCAAGACGGA...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000523410.1
CDS-3UTR CAA 90 bp CATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAAACCATCTTCGAAGAGGCAGATCACCTaGGCCTACTCTCTAGGACAC +
Preference number: 5 (lower is better)
Translates to: HDEWEENHGKWRAKKPSSKRQIT*AYSLGH
Trigger: GTGTCCTAGAGAGTAGGCCAAGGTGATCTGCCTCTT...CGAAGATGGTTTCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp TATACCCCAAGGATCCAAATGAGGTTTAGGGACATAAAACAATTGGCAAGAACCATGGGCACTGCTGAGTaGACCGCAAACTCCACTCTT +
Preference number: 5 (lower is better)
Translates to: YTPRIQMRFRDIKQLARTMGTAE*TANSTL
Trigger: AAGAGTGGAGTTTGCGGTCAACTCAGCAGTGCCCAT...GGTTCTTGCCAATTGTTTTATGTCCCTAAACCTCATTTGGATCCTTGGGGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp CCAACAGGTCACATAAGCAACAAGAACTTCCAAGAGGAAATGGATATAAAACCAGGCTATGCCACAGCTTaGGCAGAAACTTTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: PTGHISNKNFQEEMDIKPGYATA*AETFLE
Trigger: CTCCAGGAAAGTTTCTGCCAAAGCTGTGGCATAGCC...TGGTTTTATATCCATTTCCTCTTGGAAGTTCTTGTTGCTTATGTGACCTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp TACATAGGAAAAGGTGGCCCTTTTTATCCTCCTCCACCACACCACTTTGGAAAACAAGTTAGATCCGTCTaGATCAGATTGCTCCCTCAT +
Preference number: 5 (lower is better)
Translates to: YIGKGGPFYPPPPHHFGKQVRSV*IRLLPH
Trigger: ATGAGGGAGCAATCTGATCAAGACGGATCTAACTTG...TTTTCCAAAGTGGTGTGGTGGAGGAGGATAAAAAGGGCCACCTTTTCCTATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000523410.1
CDS-3UTR CAA 90 bp AGAAACTCCCTCATGATGAATGGGAGGAAAATCATGGCAAATGGAGAGCTAAGAGAACCAAATCAAAAGTaGGCTATGCCACAGCTTTGG +
Preference number: 5 (lower is better)
Translates to: RNSLMMNGRKIMANGELREPNQK*AMPQLW
Trigger: CCAAAGCTGTGGCATAGCCAACTTTTGATTTGGTTC...TCTTAGCTCTCCATTTGCCATGATTTTCCTCCCATTCATCATGAGGGAGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp TATACCCCAAGGATCCAAATGAGGTTTAGGGACATAAAACAATTGGCAAGAACCGCAAAGCAATACAACTaGAGGACTCCCTCCAAGATT +
Preference number: 5 (lower is better)
Translates to: YTPRIQMRFRDIKQLARTAKQYN*RTPSKI
Trigger: AATCTTGGAGGGAGTCCTCAAGTTGTATTGCTTTGC...GGTTCTTGCCAATTGTTTTATGTCCCTAAACCTCATTTGGATCCTTGGGGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp AATCCATACTCTGAATATGTATCAGAGCAGGTTAAAGACTACACTGCTACATACAGCACCAAGAAGAACTaGGAGGGAATATTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: NPYSEYVSEQVKDYTATYSTKKN*EGILGL
Trigger: CAAGCCCAATATTCCCTCCAAGTTCTTCTTGGTGCT...GTATGTAGCAGTGTAGTCTTTAACCTGCTCTGATACATATTCAGAGTATGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp AATCCATACTCTGAATATGTATCAGAGCAGGTTAAAGACTACACTGCTACATACGAACCAAATCAAAAGTaGGCTATGCCACAGCTTTGG +
Preference number: 5 (lower is better)
Translates to: NPYSEYVSEQVKDYTATYEPNQK*AMPQLW
Trigger: CCAAAGCTGTGGCATAGCCAACTTTTGATTTGGTTC...GTATGTAGCAGTGTAGTCTTTAACCTGCTCTGATACATATTCAGAGTATGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS-3UTR CAA 90 bp AATCCATACTCTGAATATGTATCAGAGCAGGTTAAAGACTACACTGCTACATACGAGGGAATATTGGGCTaGTTGAGAAAGTGGGAAAGA +
Preference number: 5 (lower is better)
Translates to: NPYSEYVSEQVKDYTATYEGILG*LRKWER
Trigger: TCTTTCCCACTTTCTCAACAAGCCCAATATTCCCTC...GTATGTAGCAGTGTAGTCTTTAACCTGCTCTGATACATATTCAGAGTATGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
CDS GCA 72 bp CGCGGCCCCACCAGGCACCGGTCGATGATCTCGTCCTaGTGCGCGGGCGGCAGCCGCGCCCACTCGGGCCCG +
Preference number: 6 (lower is better)
Translates to: RGPTRHRSMISS*CAGGSRAHSGP
Trigger: CGGGCCCGAGTGGGCGCGGCTGCCGCCCGCGCAGCAGGACGAGATCATCGACCGGTGCCTGGTGGGGCCGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000470540.5
ENST00000522201.1
CDS GCA 72 bp GGCCCCACCAGGCACCGGTCGATGATCTCGTCCTGCTaGGCGGGCGGCAGCCGCGCCCACTCGGGCCCGTAC +
Preference number: 6 (lower is better)
Translates to: GPTRHRSMISSC*AGGSRAHSGPY
Trigger: GTACGGGCCCGAGTGGGCGCGGCTGCCGCCCGCGCAGCAGGACGAGATCATCGACCGGTGCCTGGTGGGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000470540.5
ENST00000522201.1
CDS CCA 72 bp TTCTCTGGGCCCGTCCAGGACGCTGGGCCCGGGGCCTaGCGCGGTGAGCTGCAGATAGCCGGGGGCGCAGGG +
Preference number: 6 (lower is better)
Translates to: FSGPVQDAGPGA*RGELQIAGGAG
Trigger: CCCTGCGCCCCCGGCTATCTGCAGCTCACCGCGCCAGGCCCCGGGCCCAGCGTCCTGGACGGGCCCAGAGAA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427697.2
ENST00000521263.1
CDS CCA 72 bp CTGCAGATAGCCGGGGGCGCAGGGCAGCCCGGAGGCTaGAGGGCGACCTGGAAGGCTGGACCGGTTCGGGGC +
Preference number: 6 (lower is better)
Translates to: LQIAGGAGQPGG*RATWKAGPVRG
Trigger: GCCCCGAACCGGTCCAGCCTTCCAGGTCGCCCTCCAGCCTCCGGGCTGCCCTGCGCCCCCGGCTATCTGCAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427697.2
ENST00000521263.1
CDS GCA 72 bp AAAGTCAGCTCCCGCCGCCCCTCGGGGCCAGGTGGGTaGATGAAGTACCCGGTGGCCCAGGTGCCTTTCCCC +
Preference number: 6 (lower is better)
Translates to: KVSSRRPSGPGG*MKYPVAQVPFP
Trigger: GGGGAAAGGCACCTGGGCCACCGGGTACTTCATGCACCCACCTGGCCCCGAGGGGCGGCGGGAGCTGACTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427697.2
ENST00000521263.1
CDS GCA 72 bp GCGACCTGGAAGGCTGGACCGGTTCGGGGCATCTGGTaGTCAAGGAAAGTCAGCTCCCGCCGCCCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: ATWKAGPVRGIW*SRKVSSRRPSG
Trigger: CCCCGAGGGGCGGCGGGAGCTGACTTTCCTTGAGCACCAGATGCCCCGAACCGGTCCAGCCTTCCAGGTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427697.2
ENST00000521263.1
CDS GCA 72 bp AAGCTTTGGACAGTGGTCTGGGCTCGCTGGCGGCGGTaGCGTTGCTCGGCTCCCGGCTCAGGTGGTAGCCGG +
Preference number: 6 (lower is better)
Translates to: KLWTVVWARWRR*RCSAPGSGGSR
Trigger: CCGGCTACCACCTGAGCCGGGAGCCGAGCAACGGCACCGCCGCCAGCGAGCCCAGACCACTGTCCAAAGCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427697.2
CDS CCA 72 bp CAAGTTAGATCCTCGTCCCCGAAGCGCACCACCTTCTaGCCCGTGGGCCCGCGCAAGCCGGGGAAGCGCGTG +
Preference number: 6 (lower is better)
Translates to: QVRSSSPKRTTF*PVGPRKPGKRV
Trigger: CACGCGCTTCCCCGGCTTGCGCGGGCCCACGGGCCAGAAGGTGGTGCGCTTCGGGGACGAGGATCTAACTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000470540.5
ENST00000522201.1
CDS CCA 72 bp AGCCCTGGGAAGCTTTGGACAGTGGTCTGGGCTCGCTaGCGGCGGTGCCGTTGCTCGGCTCCCGGCTCAGGT +
Preference number: 6 (lower is better)
Translates to: SPGKLWTVVWAR*RRCRCSAPGSG
Trigger: ACCTGAGCCGGGAGCCGAGCAACGGCACCGCCGCCAGCGAGCCCAGACCACTGTCCAAAGCTTCCCAGGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427697.2
CDS CCA 72 bp AGGGCGACCTGGAAGGCTGGACCGGTTCGGGGCATCTaGTGCTCAAGGAAAGTCAGCTCCCGCCGCCCCTCG +
Preference number: 6 (lower is better)
Translates to: RATWKAGPVRGI*CSRKVSSRRPS
Trigger: CGAGGGGCGGCGGGAGCTGACTTTCCTTGAGCACCAGATGCCCCGAACCGGTCCAGCCTTCCAGGTCGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427697.2
ENST00000521263.1
CDS CCA 72 bp GAGGGGGCAGCCTCGTGCAGTGCACTGCTGAAGGCCTaGACAGGCTGGGGTCTCTCACGTTCGGTGCTCACG +
Preference number: 6 (lower is better)
Translates to: EGAASCSALLKA*TGWGLSRSVLT
Trigger: CGTGAGCACCGAACGTGAGAGACCCCAGCCTGTCCAGGCCTTCAGCAGTGCACTGCACGAGGCTGCCCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS CCA 72 bp AGGGCAGCCCGGAGGCTGGAGGGCGACCTGGAAGGCTaGACCGGTTCGGGGCATCTGGTGCTCAAGGAAAGT +
Preference number: 6 (lower is better)
Translates to: RAARRLEGDLEG*TGSGHLVLKES
Trigger: ACTTTCCTTGAGCACCAGATGCCCCGAACCGGTCCAGCCTTCCAGGTCGCCCTCCAGCCTCCGGGCTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427697.2
ENST00000521263.1
CDS CCA 72 bp CGTGTCCCTGAGTCCGCGCCCGGCGCTCTGAGAGGGTaGCCGTGGTTAATTCCCGGTAGTGACCGCCATAGC +
Preference number: 6 (lower is better)
Translates to: RVPESAPGALRG*PWLIPGSDRHS
Trigger: GCTATGGCGGTCACTACCGGGAATTAACCACGGCCACCCTCTCAGAGCGCCGGGCGCGGACTCAGGGACACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427697.2
ENST00000470540.5
ENST00000521263.1
ENST00000522201.1
CDS TCA 72 bp CGTTCGGTGCTCACGTTGGGAAGAGGACGCTGCTCCTaGCGGAGGGTGCTGGGCCTTTCCACCTTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: RSVLTLGRGRCS*RRVLGLSTLAS
Trigger: GGAGGCCAAGGTGGAAAGGCCCAGCACCCTCCGTCAGGAGCAGCGTCCTCTTCCCAACGTGAGCACCGAACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS GCA 72 bp AAGCTTTGGACAGTGGTCTGGGCTCGCTGGCGGCGGTaGCGTTGCTCGGCTCCTGGATGGATAGGGCGGAGA +
Preference number: 6 (lower is better)
Translates to: KLWTVVWARWRR*RCSAPGWIGRR
Trigger: TCTCCGCCCTATCCATCCAGGAGCCGAGCAACGGCACCGCCGCCAGCGAGCCCAGACCACTGTCCAAAGCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000470540.5
ENST00000522201.1
ENST00000523410.1
CDS CCA 72 bp AGCCCTGGGAAGCTTTGGACAGTGGTCTGGGCTCGCTaGCGGCGGTGCCGTTGCTCGGCTCCTGGATGGATA +
Preference number: 6 (lower is better)
Translates to: SPGKLWTVVWAR*RRCRCSAPGWI
Trigger: TATCCATCCAGGAGCCGAGCAACGGCACCGCCGCCAGCGAGCCCAGACCACTGTCCAAAGCTTCCCAGGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000470540.5
ENST00000522201.1
ENST00000523410.1
CDS CCA 72 bp GGACAGGCTGGGGTCTCTCACGTTCGGTGCTCACGTTaGGAAGAGGACGCTGCTCCTGACGGAGGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: GQAGVSHVRCSR*EEDAAPDGGCW
Trigger: CCAGCACCCTCCGTCAGGAGCAGCGTCCTCTTCCCAACGTGAGCACCGAACGTGAGAGACCCCAGCCTGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS CAA 72 bp TTGGACAGTGGTCTGGGCTCGCTGGCGGCGGTGCCGTaGCTCGGCTCCTGGATGGATAGGGCGGAGATACTG +
Preference number: 6 (lower is better)
Translates to: LDSGLGSLAAVP*LGSWMDRAEIL
Trigger: CAGTATCTCCGCCCTATCCATCCAGGAGCCGAGCAACGGCACCGCCGCCAGCGAGCCCAGACCACTGTCCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000470540.5
ENST00000522201.1
ENST00000523410.1
CDS TCA 72 bp CGGCCTCAGGCCCCTCCCCTCGGGACCGCTCAGCATTaGTCTTCCAGAATGACGCTTCCTCCTCCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: RPQAPPLGTAQH*SSRMTLPPPSW
Trigger: CCAGGAAGGAGGAGGAAGCGTCATTCTGGAAGATCAATGCTGAGCGGTCCCGAGGGGAGGGGCCTGAGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS GCA 72 bp AGTCCCCCTTTACGCCTCCATAGTGGATTACCGCGGTaGCCGCAGGTTTCGGGCTCCCCTTACCCGGCTCAG +
Preference number: 6 (lower is better)
Translates to: SPPLRLHSGLPR*PQVSGSPYPAQ
Trigger: CTGAGCCGGGTAAGGGGAGCCCGAAACCTGCGGGCACCGCGGTAATCCACTATGGAGGCGTAAAGGGGGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521263.1
CDS CCA 72 bp TGCCTGACATCAGGAGATGGCAGCTTCCCCTCGAGCTaGGAGGGGGCAGCCTCGTGCAGTGCACTGCTGAAG +
Preference number: 6 (lower is better)
Translates to: CLTSGDGSFPSS*EGAASCSALLK
Trigger: CTTCAGCAGTGCACTGCACGAGGCTGCCCCCTCCCAGCTCGAGGGGAAGCTGCCATCTCCTGATGTCAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS CAA 90 bp TGGGAAGCTTTGGACAGTGGTCTGGGCTCGCTGGCGGCGGTGCCGTaGCTCGGCTCCTGGATGGATAGGGCGGAGATACTGAACTCCATC +
Preference number: 6 (lower is better)
Translates to: WEALDSGLGSLAAVP*LGSWMDRAEILNSI
Trigger: GATGGAGTTCAGTATCTCCGCCCTATCCATCCAGGAGCCGAGCAACGGCACCGCCGCCAGCGAGCCCAGACCACTGTCCAAAGCTTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000470540.5
ENST00000522201.1
ENST00000523410.1
CDS TCA 72 bp TCTTCCTGGCCATGGGGCTCAGCGACGAGAAGTAAGTaGAGCGCTTTCGCTCCCGGTCGTCCAGAGGCCGGT +
Preference number: 6 (lower is better)
Translates to: SSWPWGSATRSK*SAFAPGRPEAG
Trigger: ACCGGCCTCTGGACGACCGGGAGCGAAAGCGCTTCACTTACTTCTCGTCGCTGAGCCCCATGGCCAGGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366663.10
CDS CCA 72 bp GCCTCGTGCAGTGCACTGCTGAAGGCCTGGACAGGCTaGGGTCTCTCACGTTCGGTGCTCACGTTGGGAAGA +
Preference number: 6 (lower is better)
Translates to: ASCSALLKAWTG*GLSRSVLTLGR
Trigger: TCTTCCCAACGTGAGCACCGAACGTGAGAGACCCCAGCCTGTCCAGGCCTTCAGCAGTGCACTGCACGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS TCA 72 bp GTTCCGAGAACAGGGTGTCTTCCCCATCGTCCTGCCTaGCATCAGGAGATGGCAGCTTCCCCTCGAGCTGGG +
Preference number: 6 (lower is better)
Translates to: VPRTGCLPHRPA*HQEMAASPRAG
Trigger: CCCAGCTCGAGGGGAAGCTGCCATCTCCTGATGTCAGGCAGGACGATGGGGAAGACACCCTGTTCTCGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366663.10
ENST00000427697.2
ENST00000470540.5
ENST00000523410.1
CDS GCA 72 bp TTTGTTTCCCAGGAGAAAGGGGCAGAGTGCTCATCTTaGCAAGTTAGATCCTCGTCCCCGAAGCGCACCACC +
Preference number: 6 (lower is better)
Translates to: FVSQEKGAECSS*QVRSSSPKRTT
Trigger: GGTGGTGCGCTTCGGGGACGAGGATCTAACTTGGCAAGATGAGCACTCTGCCCCTTTCTCCTGGGAAACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366663.10
ENST00000470540.5
ENST00000522201.1
CDS TCA 72 bp CTCAGCAGAATCAGGCACAGACTCAGCCCTGAACAATaGTTAGCTGTGTGGCCATGGGAAGATGACTCAGCC +
Preference number: 6 (lower is better)
Translates to: LSRIRHRLSPEQ*LAVWPWEDDSA
Trigger: GGCTGAGTCATCTTCCCATGGCCACACAGCTAATCATTGTTCAGGGCTGAGTCTGTGCCTGATTCTGCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519360.1
CDS CCA 72 bp AGGTGCCTTTCCCCAACCCAAGGAGCTCAGAACTCTTaGCAGTTCGACGTTTGCAAACAAACCAAAGAGGAG +
Preference number: 6 (lower is better)
Translates to: RCLSPTQGAQNS*QFDVCKQTKEE
Trigger: CTCCTCTTTGGTTTGTTTGCAAACGTCGAACTGCCAAGAGTTCTGAGCTCCTTGGGTTGGGGAAAGGCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521263.1
CDS CAA 72 bp CAGGTGCCTTTCCCCAACCCAAGGAGCTCAGAACTCTaGGCAGTTCGACGTTTGCAAACAAACCAAAGAGGA +
Preference number: 6 (lower is better)
Translates to: QVPFPNPRSSEL*AVRRLQTNQRG
Trigger: TCCTCTTTGGTTTGTTTGCAAACGTCGAACTGCCAAGAGTTCTGAGCTCCTTGGGTTGGGGAAAGGCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521263.1
CDS TCA 72 bp CAATGGACTCAGACAGATGAGATGAGTAGGAGTGGATaGGGGCTTGATGGTCTCAGCAGAATCAGGCACAGA +
Preference number: 6 (lower is better)
Translates to: QWTQTDEMSRSG*GLDGLSRIRHR
Trigger: TCTGTGCCTGATTCTGCTGAGACCATCAAGCCCTCATCCACTCCTACTCATCTCATCTGTCTGAGTCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519360.1
CDS GCA 72 bp TTTGTTTCCCAGGAGAAAGGGGCAGAGTGCTCATCTTaGCAAGTTAGATCCGTCTTGATCAGATTGCTCCCT +
Preference number: 6 (lower is better)
Translates to: FVSQEKGAECSS*QVRSVLIRLLP
Trigger: AGGGAGCAATCTGATCAAGACGGATCTAACTTGGCAAGATGAGCACTCTGCCCCTTTCTCCTGGGAAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523410.1
CDS GCA 72 bp AGAATAAGTCTGAAATTCAAACCCAGACATACCCCATaGAAATATCCACCCAGGACCGTGGGGGAACCAAAA +
Preference number: 6 (lower is better)
Translates to: RISLKFKPRHTP*KYPPRTVGEPK
Trigger: TTTTGGTTCCCCCACGGTCCTGGGTGGATATTTGCATGGGGTATGTCTGGGTTTGAATTTCAGACTTATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519360.1
CDS GCA 72 bp ACCCAAGGAGCTCAGAACTCTTGGCAGTTCGACGTTTaGAAACAAACCAAAGAGGAGCAGAAAGTTTTCAGA +
Preference number: 6 (lower is better)
Translates to: TQGAQNSWQFDV*KQTKEEQKVFR
Trigger: TCTGAAAACTTTCTGCTCCTCTTTGGTTTGTTTGCAAACGTCGAACTGCCAAGAGTTCTGAGCTCCTTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521263.1