RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C1ORF146 (Homo sapiens)

Ensembl gene IDs: ENSG00000203910

Ensembl transcript IDs: ENST00000370373.2, ENST00000370375.8

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp AGACCGCTCAGGGTTTCCCAAACTTCCAGAACGTTCCGTGAGCAGTaGGAGGCGCCGCCGGTAGGGCAGAGCGCCCAGGGTGCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: RPLRVSQTSRTFREQ*EAPPVGQSAQGAWG
Trigger: GCCCCAGGCACCCTGGGCGCTCTGCCCTACCGGCGGCGCCTCTCACTGCTCACGGAACGTTCTGGAAGTTTGGGAAACCCTGAGCGGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370375.8
CDS TCA 90 bp TCCTCAGAGACCGCTCAGGGTTTCCCAAACTTCCAGAACGTTCCGTaGGCAGTGAGAGGCGCCGCCGGTAGGGCAGAGCGCCCAGGGTGC +
Preference number: 5 (lower is better)
Translates to: SSETAQGFPNFQNVP*AVRGAAGRAERPGC
Trigger: GCACCCTGGGCGCTCTGCCCTACCGGCGGCGCCTCTCACTGCTCACGGAACGTTCTGGAAGTTTGGGAAACCCTGAGCGGTCTCTGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370375.8
CDS TCA 72 bp AGGGTTTCCCAAACTTCCAGAACGTTCCGTGAGCAGTaGGAGGCGCCGCCGGTAGGGCAGAGCGCCCAGGGT +
Preference number: 6 (lower is better)
Translates to: RVSQTSRTFREQ*EAPPVGQSAQG
Trigger: ACCCTGGGCGCTCTGCCCTACCGGCGGCGCCTCTCACTGCTCACGGAACGTTCTGGAAGTTTGGGAAACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370375.8
CDS TCA 72 bp ACCGCTCAGGGTTTCCCAAACTTCCAGAACGTTCCGTaGGCAGTGAGAGGCGCCGCCGGTAGGGCAGAGCGC +
Preference number: 6 (lower is better)
Translates to: TAQGFPNFQNVP*AVRGAAGRAER
Trigger: GCGCTCTGCCCTACCGGCGGCGCCTCTCACTGCTCACGGAACGTTCTGGAAGTTTGGGAAACCCTGAGCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370375.8
CDS CAA 90 bp GTAGTCTTTGCTATAGTGCACATAAGATTAATAGCATTTACTGTGTaGTGTACTGGAAGTATTCGTAAGTTACAACCCAGGAATCTCTGC +
Preference number: 6 (lower is better)
Translates to: VVFAIVHIRLIAFTV*CTGSIRKLQPRNLC
Trigger: GCAGAGATTCCTGGGTTGTAACTTACGAATACTTCCAGTACACAACACAGTAAATGCTATTAATCTTATGTGCACTATAGCAAAGACTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370373.2
ENST00000370375.8
CDS CCA 72 bp AGCTGTTATCATTCTGTAGCAAATGCTATCTATGTATaGTTTGGAGGTAGTCTTTGCTATAGTGCACATAAG +
Preference number: 6 (lower is better)
Translates to: SCYHSVANAIYV*FGGSLCYSAHK
Trigger: CTTATGTGCACTATAGCAAAGACTACCTCCAAACCATACATAGATAGCATTTGCTACAGAATGATAACAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370373.2
ENST00000370375.8
CDS CAA 72 bp GCTATAGTGCACATAAGATTAATAGCATTTACTGTGTaGTGTACTGGAAGTATTCGTAAGTTACAACCCAGG +
Preference number: 6 (lower is better)
Translates to: AIVHIRLIAFTV*CTGSIRKLQPR
Trigger: CCTGGGTTGTAACTTACGAATACTTCCAGTACACAACACAGTAAATGCTATTAATCTTATGTGCACTATAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370373.2
ENST00000370375.8