RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for C1ORF127 (Homo sapiens)

Ensembl gene IDs: ENSG00000175262

Ensembl transcript IDs: ENST00000377004.8, ENST00000418570.6, ENST00000468348.1, ENST00000476357.1, ENST00000520253.1

Found 358 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTaGTGGGTCTGCCTGGAGGTGGGCGTCCTGGAGTCTCCATGGAGG +
Preference number: 1 (lower is better)
Translates to: PTVSSSWLHFKSHFQ*WVCLEVGVLESPWR
Trigger: CCTCCATGGAGACTCCAGGACGCCCACCTCCAGGCAGACCCATCACTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468348.1
3UTR GCA 90 bp TTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTaGATTTCAAATCCCACTTCCAGTGATGGGTCTGCCTGGAGGTGG +
Preference number: 1 (lower is better)
Translates to: FLVPGGRCRRSPLLG*ISNPTSSDGSAWRW
Trigger: CCACCTCCAGGCAGACCCATCACTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
3UTR-3UTR TCA 90 bp TCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACGGACAGCTGGGTCACTaGGGGTCACTGGGGCTGTCC +
Preference number: 2 (lower is better)
Translates to: SGRALPTVSSSWLHFKSHGQLGH*GSLGLS
Trigger: GGACAGCCCCAGTGACCCTCAGTGACCCAGCTGTCC...GTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
3UTR-3UTR GCA 90 bp TTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAACAGCGGGGTACCGGCTaGCTGGAGTCTCCATGGAGG +
Preference number: 2 (lower is better)
Translates to: FLFRAGVADGLLFLAAFQQRGTG*LESPWR
Trigger: CCTCCATGGAGACTCCAGGCAGCCGGTACCCCGCTG...TTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
3UTR-3UTR CCA 90 bp CTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCTGGAGGTGGGCGTCTaGGGGTCCACCTTTCCAGGG +
Preference number: 2 (lower is better)
Translates to: LVPGGRCRRSPLLGCISNLEVGV*GSTFPG
Trigger: CCCTGGAAAGGTGGACCCCCAGACGCCCACCTCCAG...ATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
3UTR-3UTR CCA 90 bp TCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAAGGGTCTGCCTGGAGGTaGGCGTCCTGGAGTCTCCAT +
Preference number: 2 (lower is better)
Translates to: SCSGRALPTVSSSWLHFKGSAWR*ASWSLH
Trigger: ATGGAGACTCCAGGACGCCCACCTCCAGGCAGACCC...TTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468348.1
3UTR-3UTR CCA 90 bp TTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCAAGTGATGGGTCTGCCTaGAGGTGGGCGTCCTGGAGT +
Preference number: 2 (lower is better)
Translates to: FRAGVADGLLFLAAFQIPSDGSA*RWASWS
Trigger: ACTCCAGGACGCCCACCTCCAGGCAGACCCATCACT...TGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468348.1
3UTR-3UTR TCA 90 bp TTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGGACAGCTGGGTCACTaGGGGTCACTGGGGCTGTCC +
Preference number: 2 (lower is better)
Translates to: LFIYFLFRAGVADGLLFLGQLGH*GSLGLS
Trigger: GGACAGCCCCAGTGACCCTCAGTGACCCAGCTGTCC...CAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
3UTR-3UTR TCA 90 bp TATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTAAATCCCACTTCCAGTaGTGGGTCTGCCTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: YFLFRAGVADGLLFLAAFKSHFQ*WVCLEV
Trigger: CACCTCCAGGCAGACCCATCACTGGAAGTGGGATTT...AAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
3UTR-3UTR GCA 90 bp TTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGCAGCGGGGTACCGGCTaGCTGGAGTCTCCATGGAGG +
Preference number: 2 (lower is better)
Translates to: LFIYFLFRAGVADGLLFLQRGTG*LESPWR
Trigger: CCTCCATGGAGACTCCAGGCAGCCGGTACCCCGCTG...CAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
3UTR GCA 72 bp CCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTaGATTTCAAATCCCACTTCCAGTGATGGGTCTGCC +
Preference number: 3 (lower is better)
Translates to: PGGRCRRSPLLG*ISNPTSSDGSA
Trigger: GGCAGACCCATCACTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
3UTR TCA 72 bp TCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTaGTGGGTCTGCCTGGAGGTGGGCGTCCTGGAGTCT +
Preference number: 3 (lower is better)
Translates to: SSSWLHFKSHFQ*WVCLEVGVLES
Trigger: AGACTCCAGGACGCCCACCTCCAGGCAGACCCATCACTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468348.1
CDS-3UTR CCA 90 bp GGTGGGCGTCTGGGGGTCCACCTTTCCAGGGAAGCACTGAGTGAGTGCTCTTCCTGGCATCGCTGGACCTaGAGCACCCCGGCCGCCGGA +
Preference number: 4 (lower is better)
Translates to: GGRLGVHLSREALSECSSWHRWT*STPAAG
Trigger: TCCGGCGGCCGGGGTGCTCCAGGTCCAGCGATGCCA...GGAAGAGCACTCACTCAGTGCTTCCCTGGAAAGGTGGACCCCCAGACGCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp GGTGGGCGTCTGGGGGTCCACCTTTCCAGGGAAGCACTGAGTGAGTGCTCTTCCGGCTGGGGACCTCGCTaGGCTTGCACCACTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GGRLGVHLSREALSECSSGWGPR*ACTTLG
Trigger: CCCCAGAGTGGTGCAAGCTCAGCGAGGTCCCCAGCC...GGAAGAGCACTCACTCAGTGCTTCCCTGGAAAGGTGGACCCCCAGACGCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GGTGGGCGTCTGGGGGTCCACCTTTCCAGGGAAGCACTGAGTGAGTGCTCTTCCGCTCCGAGGGGAGCGTaGCTGGAGGTGTGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: GGRLGVHLSREALSECSSAPRGA*LEVWGV
Trigger: GACACCCCACACCTCCAGCCACGCTCCCCTCGGAGC...GGAAGAGCACTCACTCAGTGCTTCCCTGGAAAGGTGGACCCCCAGACGCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp TTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCAGGCCGGGCTCCCCCATaGTGGGCTCAGGTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: FRAGVADGLLFLAAFQIPGRAPP*WAQVQP
Trigger: TGGCTGCACCTGAGCCCATCATGGGGGAGCCCGGCC...TGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp TCCAGGGAAGCACTGAGTGAGTGCTCTTCCGGCCCAGAACACTGTACCCAGCCAGGCCGGGCTCCCCCATaGTGGGCTCAGGTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SREALSECSSGPEHCTQPGRAPP*WAQVQP
Trigger: TGGCTGCACCTGAGCCCATCATGGGGGAGCCCGGCC...TGGCTGGGTACAGTGTTCTGGGCCGGAAGAGCACTCACTCAGTGCTTCCCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GGTGGGCGTCTGGGGGTCCACCTTTCCAGGGAAGCACTGAGTGAGTGCTCTTCCCCCTCGCTGGCAGGATaGAGAGTCCCGGCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: GGRLGVHLSREALSECSSPSLAG*RVPAPL
Trigger: TAGAGGGGCCGGGACTCTCCATCCTGCCAGCGAGGG...GGAAGAGCACTCACTCAGTGCTTCCCTGGAAAGGTGGACCCCCAGACGCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp GTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCGGACAGCTGGGTCACTaGGGGTCACTGGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: VPGGRCRRSPLLGCISNPGQLGH*GSLGLS
Trigger: GGACAGCCCCAGTGACCCTCAGTGACCCAGCTGTCC...GGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR GCA 90 bp TCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACGTGTCCAGGGATCCCTaGTTCCCCTGGGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SGRALPTVSSSWLHFKSHVSRDP*FPWGRL
Trigger: CAGCCTCCCCCAGGGGAAGCAGGGATCCCTGGACAC...GTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCGAGGGGAGCGTGGCTaGAGGTGTGGGGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GRALPTVSSSWLHFKSHFRGERG*RCGVSR
Trigger: CCTGGACACCCCACACCTCCAGCCACGCTCCCCTCG...GAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp CGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCGAGGGGAGCGTGGCTaGAGGTGTGGGGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RAGVADGLLFLAAFQIPLRGERG*RCGVSR
Trigger: CCTGGACACCCCACACCTCCAGCCACGCTCCCCTCG...AAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCCAGAGCCGGGTGCGTTaGCAAGACTGGACGTGGCCG +
Preference number: 4 (lower is better)
Translates to: VPGGRCRRSPLLGCISNPQSRVR*QDWTWP
Trigger: CGGCCACGTCCAGTCTTGCCAACGCACCCGGCTCTG...GGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCGCTGGAACTCCTCACTaGCTTGGCCGGGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: VPGGRCRRSPLLGCISNPAGTPH*LGRAPP
Trigger: TGGGGGAGCCCGGCCAAGCCAGTGAGGAGTTCCAGC...GGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp TCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACGGGAACACCGTGGGCTaGACACAGGCAAGCCAGACG +
Preference number: 4 (lower is better)
Translates to: SGRALPTVSSSWLHFKSHGNTVG*TQASQT
Trigger: CGTCTGGCTTGCCTGTGTTCAGCCCACGGTGTTCCC...GTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS-3UTR TCA 90 bp CGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGAGGCCAGCCAGGGGCTaGCTCCAGGTATCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RALPTVSSSWLHFKSHFQRPARG*LQVSGL
Trigger: CAGGCCCGATACCTGGAGTCAGCCCCTGGCTGGCCT...CTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp CGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTGGACAGCTGGGTCACTaGGGGTCACTGGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: RAGVADGLLFLAAFQIPLGQLGH*GSLGLS
Trigger: GGACAGCCCCAGTGACCCTCAGTGACCCAGCTGTCC...AAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR GCA 90 bp GTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCCAGGGGACCTCCAGGTaGCTGGCAAGTGCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: VPGGRCRRSPLLGCISNPQGTSR*LASARS
Trigger: GGACCTTGCACTTGCCAGGCACCTGGAGGTCCCCTG...GGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS-3UTR GCA 90 bp TTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCAGCGTCGGAAGGCCGGTaGAGGAGGTCCCGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: FRAGVADGLLFLAAFQIPASEGR*RRSRES
Trigger: GCTTTCTCGGGACCTCCTGCACCGGCCTTCCGACGC...TGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR GCA 90 bp GGTGGGCGTCTGGGGGTCCACCTTTCCAGGGAAGCACTGAGTGAGTGCTCTTCCAGAAACCAGCTCCTCTaGAGCCAGTGTGGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: GGRLGVHLSREALSECSSRNQLL*SQCGPP
Trigger: TGGCGGGCCACACTGGCTGCAGAGGAGCTGGTTTCT...GGAAGAGCACTCACTCAGTGCTTCCCTGGAAAGGTGGACCCCCAGACGCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTGGTCCTGGGGATGGTaGGGAGGGAGTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SGRALPTVSSSWLHFKSHWSWGW*GGSGPQ
Trigger: CTGAGGACCACTCCCTCCCCACCATCCCCAGGACCA...GTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp ATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCGCTCCGAGGGGAGCGTaGCTGGAGGTGTGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: ISCSGRALPTVSSSWLHFAPRGA*LEVWGV
Trigger: GACACCCCACACCTCCAGCCACGCTCCCCTCGGAGC...GAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGAGCCGGGTGCGTTaGCAAGACTGGACGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GRALPTVSSSWLHFKSHFQSRVR*QDWTWP
Trigger: CGGCCACGTCCAGTCTTGCCAACGCACCCGGCTCTG...GAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATCCTCTGCAGCCAGTGTaGCCCGCCAGGGCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: FISCSGRALPTVSSSWLHPLQPV*PARASP
Trigger: TGGCGAGGCCCTGGCGGGCCACACTGGCTGCAGAGG...ATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTCCTCTGCAGCCAGTGTaGCCCGCCAGGGCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: GRCRRSPLLGCISNPTSSPLQPV*PARASP
Trigger: TGGCGAGGCCCTGGCGGGCCACACTGGCTGCAGAGG...ACTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp CGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCCTCGCTGGCAGGATaGAGAGTCCCGGCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: RAGVADGLLFLAAFQIPLPSLAG*RVPAPL
Trigger: TAGAGGGGCCGGGACTCTCCATCCTGCCAGCGAGGG...AAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp TCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACCCTCAGTGCAGCAGTTaGGGCAGGCGACTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SGRALPTVSSSWLHFKSHPQCSS*GRRLCS
Trigger: GGAACAGAGTCGCCTGCCTCAACTGCTGCACTGAGG...GTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp GGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTGGGCTGGGGACCTCGCTaGGCTTGCACCACTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GVADGLLFLAAFQIPLPVGWGPR*ACTTLG
Trigger: CCCCAGAGTGGTGCAAGCTCAGCGAGGTCCCCAGCC...CACTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp TCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTGTGGCTTTCAGCACTaGGGGCCAAGGTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SGRALPTVSSSWLHFKSHCGFQH*GPRWAL
Trigger: CAGAGCCCACCTTGGCCCTCAGTGCTGAAAGCCACA...GTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR GCA 90 bp GGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCCAGGTGCCTGGCAAGTaGAAGGTCCTGGCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: GGRCRRSPLLGCISNPTSQVPGK*KVLASH
Trigger: GTGGCTGGCCAGGACCTTGCACTTGCCAGGCACCTG...GGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS-3UTR GCA 90 bp GGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCCCCTTTTTGGCCAGTaGGTCGGAAGGCCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GRALPTVSSSWLHFKSHFPLFGQ*VGRPVQ
Trigger: CTGCACCGGCCTTCCGACGCACTGGCCAAAAAGGGG...GAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR GCA 90 bp GCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTGTCCAGGGATCCCTaGTTCCCCTGGGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: AGVADGLLFLAAFQIPLPVSRDP*FPWGRL
Trigger: CAGCCTCCCCCAGGGGAAGCAGGGATCCCTGGACAC...TGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR GCA 90 bp GTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCAGAAACCAGCTCCTCTaGAGCCAGTGTGGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: VPGGRCRRSPLLGCISNPRNQLL*SQCGPP
Trigger: TGGCGGGCCACACTGGCTGCAGAGGAGCTGGTTTCT...GGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR GCA 90 bp CGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGCAGCGGGGTACCGGCTaGCTGGAGTCTCCATGGAGG +
Preference number: 4 (lower is better)
Translates to: RALPTVSSSWLHFKSHFQQRGTG*LESPWR
Trigger: CCTCCATGGAGACTCCAGGCAGCCGGTACCCCGCTG...CTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCAACTTCTTGGCATCGCTaGACCTGGAGCACCCCGGCC +
Preference number: 4 (lower is better)
Translates to: FRAGVADGLLFLAAFQIPTSWHR*TWSTPA
Trigger: GGCCGGGGTGCTCCAGGTCCAGCGATGCCAAGAAGT...TGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TCCAGGGAAGCACTGAGTGAGTGCTCTTCCGGCCCAGAACACTGTACCCAGCCATGGTCCTGGGGATGGTaGGGAGGGAGTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SREALSECSSGPEHCTQPWSWGW*GGSGPQ
Trigger: CTGAGGACCACTCCCTCCCCACCATCCCCAGGACCA...TGGCTGGGTACAGTGTTCTGGGCCGGAAGAGCACTCACTCAGTGCTTCCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TCCAGGGAAGCACTGAGTGAGTGCTCTTCCGGCCCAGAACACTGTACCCAGCCAAGGGGTCTCTGGTCCTaGGGATGGTGGGGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: SREALSECSSGPEHCTQPRGLWS*GWWGGS
Trigger: ACTCCCTCCCCACCATCCCCAGGACCAGAGACCCCT...TGGCTGGGTACAGTGTTCTGGGCCGGAAGAGCACTCACTCAGTGCTTCCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAAAGGTGGCACTCCCGCTaGAGGGGTCTCTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SCSGRALPTVSSSWLHFKRWHSR*RGLWSW
Trigger: CCAGGACCAGAGACCCCTCCAGCGGGAGTGCCACCT...TTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp CGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGAGGTGGCACTCCCGCTaGAGGGGTCTCTGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: RALPTVSSSWLHFKSHFQRWHSR*RGLWSW
Trigger: CCAGGACCAGAGACCCCTCCAGCGGGAGTGCCACCT...CTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp CTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATGGAGGAAGCAGCAGGTaGCACTCCCGCTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: LVPGGRCRRSPLLGCISNGGSSR*HSRWRG
Trigger: ACCCCTCCAGCGGGAGTGCCACCTGCTGCTTCCTCC...ATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACCGAGAAAGCCATTCCTaGGCAGCTGGTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SGRALPTVSSSWLHFKSHRESHS*AAGPAA
Trigger: GGCTGCAGGACCAGCTGCCCAGGAATGGCTTTCTCG...GTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp CTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATGCGTGGCTGGAGGTGTaGGGTGTCCAGGGATCCCTG +
Preference number: 4 (lower is better)
Translates to: LVPGGRCRRSPLLGCISNAWLEV*GVQGSL
Trigger: CAGGGATCCCTGGACACCCCACACCTCCAGCCACGC...ATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp ATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCGCGTGGCTGGAGGTGTaGGGTGTCCAGGGATCCCTG +
Preference number: 4 (lower is better)
Translates to: ISCSGRALPTVSSSWLHFAWLEV*GVQGSL
Trigger: CAGGGATCCCTGGACACCCCACACCTCCAGCCACGC...GAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCTGGCAAGACTGGACGTaGCCGCCAGGGACTAGCCTG +
Preference number: 4 (lower is better)
Translates to: GGRCRRSPLLGCISNPTSWQDWT*PPGTSL
Trigger: CAGGCTAGTCCCTGGCGGCCACGTCCAGTCTTGCCA...GGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCAACTCCTCACTGGCTTaGCCGGGCTCCCCCATGATG +
Preference number: 4 (lower is better)
Translates to: VPGGRCRRSPLLGCISNPNSSLA*PGSPMM
Trigger: CATCATGGGGGAGCCCGGCCAAGCCAGTGAGGAGTT...GGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCGGCCTCGCCAATGGCTaGAACTCCTCACTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: VPGGRCRRSPLLGCISNPGLANG*NSSLAW
Trigger: CCAAGCCAGTGAGGAGTTCCAGCCATTGGCGAGGCC...GGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp CGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGGGCCTCGCCAATaGCTGGAACTCCTCACTGGC +
Preference number: 4 (lower is better)
Translates to: RAGVADGLLFLAAFQIPLPGPRQ*LELLTG
Trigger: GCCAGTGAGGAGTTCCAGCCATTGGCGAGGCCCTGG...AAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp CGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGAGACCAGGCCCTGTCTaGCGTGGCCTCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: RALPTVSSSWLHFKSHFQRPGPV*RGLSTS
Trigger: GGAGGTGGAGAGGCCACGCCAGACAGGGCCTGGTCT...CTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp ATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAGACCAGGCCCTGTCTaGCGTGGCCTCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: ISCSGRALPTVSSSWLHFRPGPV*RGLSTS
Trigger: GGAGGTGGAGAGGCCACGCCAGACAGGGCCTGGTCT...GAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCTGTGGCATCCCTCGCTaGCAGGATGGAGAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: GRALPTVSSSWLHFKSHFCGIPR*QDGESR
Trigger: CCGGGACTCTCCATCCTGCCAGCGAGGGATGCCACA...GAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCCAGGGTTTGCGTGGATaGAGGGCTGGACGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: VPGGRCRRSPLLGCISNPQGLRG*RAGRVC
Trigger: GCACACACGTCCAGCCCTCCATCCACGCAAACCCTG...GGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCAGGGGTACCGGCTGCCTaGAGTCTCCATGGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: FRAGVADGLLFLAAFQIPGVPAA*SLHGGS
Trigger: TGAGCCTCCATGGAGACTCCAGGCAGCCGGTACCCC...TGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp TTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAGCCGGGAGACCTGGATaGACATGGGCCCACAGTGGA +
Preference number: 4 (lower is better)
Translates to: FLFRAGVADGLLFLAAFQAGRPG*TWAHSG
Trigger: TCCACTGTGGGCCCATGTTCATCCAGGTCTCCCGGC...TTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp CGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGGCCGGGAGACCTGGATaGACATGGGCCCACAGTGGA +
Preference number: 4 (lower is better)
Translates to: RALPTVSSSWLHFKSHFQAGRPG*TWAHSG
Trigger: TCCACTGTGGGCCCATGTTCATCCAGGTCTCCCGGC...CTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp CGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTAGCACCTCCCACCTCTaGAGAAGGCCTTGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: RAGVADGLLFLAAFQIPLSTSHL*RRPCLG
Trigger: CCCGAGACAAGGCCTTCTTCAGAGGTGGGAGGTGCT...AAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS-3UTR TCA 90 bp TTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACCTCAGTGCAGCAGTTaGGGCAGGCGACTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: FRAGVADGLLFLAAFQIPPQCSS*GRRLCS
Trigger: GGAACAGAGTCGCCTGCCTCAACTGCTGCACTGAGG...TGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp TTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCAAGCCACATCCCCGCTTaGCAAGCCTCTCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FRAGVADGLLFLAAFQIPSHIPA*QASQQE
Trigger: CTCCTGCTGAGAGGCTTGTCAAGCGGGGATGTGGCT...TGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp TTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACCCTGGGCATCCCGGTaGGTTCAGGTCCTGAACTCA +
Preference number: 4 (lower is better)
Translates to: FRAGVADGLLFLAAFQIPPWASR*VQVLNS
Trigger: TGAGTTCAGGACCTGAACTCACCGGGATGCCCAGGG...TGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp TTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACCCTCCACACTGTCTTaGAGCTCAGGAGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: FRAGVADGLLFLAAFQIPPSTLS*SSGGLW
Trigger: CCACAGGCCTCCTGAGCTTCAAGACAGTGTGGAGGG...TGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR TCA 90 bp CGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCCTCCACACTGTCTTaGAGCTCAGGAGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: RAGVADGLLFLAAFQIPLPSTLS*SSGGLW
Trigger: CCACAGGCCTCCTGAGCTTCAAGACAGTGTGGAGGG...AAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR TCA 90 bp CTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCATGGAGGCTCAGCGTaGGGGCCTCTCAGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: LVPGGRCRRSPLLGCISNHGGSA*GPLRKP
Trigger: GGGCTTTCTGAGAGGCCCTCACGCTGAGCCTCCATG...ATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR GCA 90 bp CGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGCCCCTTTTTGGCCAGTaGGTCGGAAGGCCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: RALPTVSSSWLHFKSHFQPLFGQ*VGRPVQ
Trigger: CTGCACCGGCCTTCCGACGCACTGGCCAAAAAGGGG...CTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR GCA 90 bp TTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACACAGGCTCAGGGTTTaGGTGGATGGAGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: FRAGVADGLLFLAAFQIPHRLRV*VDGGLD
Trigger: GTCCAGCCCTCCATCCACGCAAACCCTGAGCCTGTG...TGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR GCA 90 bp TTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAGTTCCGGGCGGGCGTTaGCGACGGTCTCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: FLVPGGRCRRSPLLGCISVPGGR*RRSPLL
Trigger: AAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAAC...TGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR CCA 90 bp CGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGCTCAGCCCCTCCACGTaGCTCCTTGGGATCCACAGG +
Preference number: 4 (lower is better)
Translates to: RALPTVSSSWLHFKSHFQLSPST*LLGIHR
Trigger: CCTGTGGATCCCAAGGAGCCACGTGGAGGGGCTGAG...CTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS-3UTR CCA 90 bp ATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCGGACCTCCAGGTGCCTaGCAAGTGCAAGGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: ISCSGRALPTVSSSWLHFGPPGA*QVQGPG
Trigger: GCCAGGACCTTGCACTTGCCAGGCACCTGGAGGTCC...GAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS-3UTR CCA 90 bp GGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCAACATGGGCCCACAGTaGACGCTTTCCTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GRALPTVSSSWLHFKSHFNMGPQ*TLSWPS
Trigger: GCTGGGCCAGGAAAGCGTCCACTGTGGGCCCATGTT...GAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp CTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATAGGGGCCGGGAGACCTaGATGAACATGGGCCCACAG +
Preference number: 4 (lower is better)
Translates to: LVPGGRCRRSPLLGCISNRGRET*MNMGPQ
Trigger: CTGTGGGCCCATGTTCATCCAGGTCTCCCGGCCCCT...ATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACCCTTGTCTCGGGCTTTaGACGGTGACAGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SGRALPTVSSSWLHFKSHPCLGL*TVTVVA
Trigger: TGCCACCACTGTCACCGTCCAAAGCCCGAGACAAGG...GTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAAGTGCGTTGGCAAGACTaGACGTGGCCGCCAGGGACT +
Preference number: 4 (lower is better)
Translates to: SCSGRALPTVSSSWLHFKVRWQD*TWPPGT
Trigger: AGTCCCTGGCGGCCACGTCCAGTCTTGCCAACGCAC...TTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAGTGCGTTGGCAAGACTaGACGTGGCCGCCAGGGACT +
Preference number: 4 (lower is better)
Translates to: FLFRAGVADGLLFLAAFQVRWQD*TWPPGT
Trigger: AGTCCCTGGCGGCCACGTCCAGTCTTGCCAACGCAC...TTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCGACTTCCTGGAGACTTaGCGGGGTCCTGTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: GGRCRRSPLLGCISNPTSDFLET*RGPVQA
Trigger: GGCCTGAACAGGACCCCGCCAAGTCTCCAGGAAGTC...GGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAACAGGAGGGGACTTCCTaGAGACTTGGCGGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: FLFRAGVADGLLFLAAFQQEGTS*RLGGVL
Trigger: CAGGACCCCGCCAAGTCTCCAGGAAGTCCCCTCCTG...TTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCACAGGAGGGGACTTCCTaGAGACTTGGCGGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: AGVADGLLFLAAFQIPLPQEGTS*RLGGVL
Trigger: CAGGACCCCGCCAAGTCTCCAGGAAGTCCCCTCCTG...TGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp CGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGCCAGAGCACGTTTCCTaGGGCTCTCCGGGAGAACGG +
Preference number: 4 (lower is better)
Translates to: RALPTVSSSWLHFKSHFQPEHVS*GSPGER
Trigger: CCGTTCTCCCGGAGAGCCCCAGGAAACGTGCTCTGG...CTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTAGGCCCTGTCTGGCGTaGCCTCTCCACCTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: LFLVPGGRCRRSPLLGCIRPCLA*PLHLRS
Trigger: GGAACGGAGGTGGAGAGGCCACGCCAGACAGGGCCT...AATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATAGGCCCTGTCTGGCGTaGCCTCTCCACCTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: FISCSGRALPTVSSSWLHRPCLA*PLHLRS
Trigger: GGAACGGAGGTGGAGAGGCCACGCCAGACAGGGCCT...ATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCATGTGGCATCCCTCGCTaGCAGGATGGAGAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: AGVADGLLFLAAFQIPLPCGIPR*QDGESR
Trigger: CCGGGACTCTCCATCCTGCCAGCGAGGGATGCCACA...TGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCTCCAGGTATCGGGCCTaGTCTGGCCCTCCCACAGAT +
Preference number: 4 (lower is better)
Translates to: GGRCRRSPLLGCISNPTSSRYRA*SGPPTD
Trigger: ATCTGTGGGAGGGCCAGACCAGGCCCGATACCTGGA...GGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCGTAGCAACACTCCTGTaGGAGCCCACAGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GGRCRRSPLLGCISNPTSVATLL*EPTGSG
Trigger: CCCTGAGCCTGTGGGCTCCCACAGGAGTGTTGCTAC...GGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR CCA 90 bp TTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAGGGGTACCGGCTGCCTaGAGTCTCCATGGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: FLFRAGVADGLLFLAAFQGVPAA*SLHGGS
Trigger: TGAGCCTCCATGGAGACTCCAGGCAGCCGGTACCCC...TTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTGCTGGAGGTGGGCGTCTaGGGGTCCACCTTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GVADGLLFLAAFQIPLPVLEVGV*GSTFPG
Trigger: CCCTGGAAAGGTGGACCCCCAGACGCCCACCTCCAG...CACTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCTGGAGGTGGGCGTCTaGGGGTCCACCTTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: YFLFRAGVADGLLFLAAFLEVGV*GSTFPG
Trigger: CCCTGGAAAGGTGGACCCCCAGACGCCCACCTCCAG...AAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp CGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGGGGTCTGCCTGGAGGTaGGCGTCCTGGAGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: RALPTVSSSWLHFKSHFQGSAWR*ASWSLH
Trigger: ATGGAGACTCCAGGACGCCCACCTCCAGGCAGACCC...CTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468348.1
CDS-3UTR TCA 90 bp CGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGCGGCCGCCGGAATGCTaGCCACCACAAAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: RALPTVSSSWLHFKSHFQRPPEC*PPQSPC
Trigger: ACAAGGACTTTGTGGTGGTCAGCATTCCGGCGGCCG...CTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp ATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCTGTGGCTTTCAGCACTaGGGGCCAAGGTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ISCSGRALPTVSSSWLHFCGFQH*GPRWAL
Trigger: CAGAGCCCACCTTGGCCCTCAGTGCTGAAAGCCACA...GAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR TCA 90 bp TTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTCATGGAGGCTCAGCGTaGGGGCCTCTCAGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: LFLVPGGRCRRSPLLGCIHGGSA*GPLRKP
Trigger: GGGCTTTCTGAGAGGCCCTCACGCTGAGCCTCCATG...AATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR TCA 90 bp CTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCTGACCTCCCACCTCTaGAGAAGGCCTTGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: LVPGGRCRRSPLLGCISNLTSHL*RRPCLG
Trigger: CCCGAGACAAGGCCTTCTTCAGAGGTGGGAGGTCAG...ATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418570.6
CDS-3UTR GCA 90 bp CGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTGCCGGTTTGGCTGTTTaGAGGAATGGTCCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: RAGVADGLLFLAAFQIPLAGLAV*RNGPSP
Trigger: GGGGCTTGGACCATTCCTGCAAACAGCCAAACCGGC...AAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR GCA 90 bp TCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAAAGGGTCAGAGCCGGGTaGGTTGGCAAGACTGGACGT +
Preference number: 4 (lower is better)
Translates to: SCSGRALPTVSSSWLHFKRVRAG*VGKTGR
Trigger: ACGTCCAGTCTTGCCAACGCACCCGGCTCTGACCCT...TTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR GCA 90 bp CGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTTTCCATAGGAAGAACTaGCAGGGGCGCTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: RAGVADGLLFLAAFQIPLFHRKN*QGRCQP
Trigger: AGGCTGGCAGCGCCCCTGGCAGTTCTTCCTATGGAA...AAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR GCA 90 bp CGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTGGGTGTCAGAAGAGCTaGTGGGCGAACAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RAGVADGLLFLAAFQIPLGCQKS*WANRFW
Trigger: CCAGAACCTGTTCGCCCAGCAGCTCTTCTGACACCC...AAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR GCA 90 bp GCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCACACAGGCTCAGGGTTTaGGTGGATGGAGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: AGVADGLLFLAAFQIPLPHRLRV*VDGGLD
Trigger: GTCCAGCCCTCCATCCACGCAAACCCTGAGCCTGTG...TGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR GCA 90 bp GGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTGTTCCGGGCGGGCGTTaGCGACGGTCTCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GRCRRSPLLGCISNPTSSVPGGR*RRSPLL
Trigger: AAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAAC...ACTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR CCA 90 bp GTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCCTCCACGTGGCTCCTTaGGATCCACAGGGTCATGTA +
Preference number: 4 (lower is better)
Translates to: VPGGRCRRSPLLGCISNPLHVAP*DPQGHV
Trigger: TACATGACCCTGTGGATCCCAAGGAGCCACGTGGAG...GGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS-3UTR CCA 90 bp TATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGTGGCATCGCTGGACCTaGAGCACCCCGGCCGCCGGA +
Preference number: 4 (lower is better)
Translates to: YLFISCSGRALPTVSSSWWHRWT*STPAAG
Trigger: TCCGGCGGCCGGGGTGCTCCAGGTCCAGCGATGCCA...CCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCGTTCCTCCGACTTCTTaGCATCGCTGGACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GGRCRRSPLLGCISNPTSVPPTS*HRWTWS
Trigger: GCTCCAGGTCCAGCGATGCCAAGAAGTCGGAGGAAC...GGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACGAGCTTGCACCACTCTaGGGAGAATGGAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: SGRALPTVSSSWLHFKSHELAPL*GEWRQM
Trigger: CATCTGCCTCCATTCTCCCCAGAGTGGTGCAAGCTC...GTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTCGCCAGGGACTAGCCTaGACACCCTCTACAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LFLVPGGRCRRSPLLGCIRQGLA*TPSTGS
Trigger: GGAGCCTGTAGAGGGTGTCCAGGCTAGTCCCTGGCG...AATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTTGGCAAGACTGGACGTaGCCGCCAGGGACTAGCCTG +
Preference number: 4 (lower is better)
Translates to: GRCRRSPLLGCISNPTSSWQDWT*PPGTSL
Trigger: CAGGCTAGTCCCTGGCGGCCACGTCCAGTCTTGCCA...ACTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp ATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCGACTTCCTGGAGACTTaGCGGGGTCCTGTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: ISCSGRALPTVSSSWLHFDFLET*RGPVQA
Trigger: GGCCTGAACAGGACCCCGCCAAGTCTCCAGGAAGTC...GAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp ATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCGGCCTCGCCAATGGCTaGAACTCCTCACTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: ISCSGRALPTVSSSWLHFGLANG*NSSLAW
Trigger: CCAAGCCAGTGAGGAGTTCCAGCCATTGGCGAGGCC...GAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTCCAGGGCCTCGCCAATaGCTGGAACTCCTCACTGGC +
Preference number: 4 (lower is better)
Translates to: LFLVPGGRCRRSPLLGCIPGPRQ*LELLTG
Trigger: GCCAGTGAGGAGTTCCAGCCATTGGCGAGGCCCTGG...AATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCCAGAGCACGTTTCCTaGGGCTCTCCGGGAGAACGG +
Preference number: 4 (lower is better)
Translates to: YFLFRAGVADGLLFLAAFPEHVS*GSPGER
Trigger: CCGTTCTCCCGGAGAGCCCCAGGAAACGTGCTCTGG...AAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAGGCTCAGGGTTTGCGTaGATGGAGGGCTGGACGTGT +
Preference number: 4 (lower is better)
Translates to: FLVPGGRCRRSPLLGCISGSGFA*MEGWTC
Trigger: ACACGTCCAGCCCTCCATCCACGCAAACCCTGAGCC...TGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp CTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATGTAGCAACACTCCTGTaGGAGCCCACAGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LVPGGRCRRSPLLGCISNVATLL*EPTGSG
Trigger: CCCTGAGCCTGTGGGCTCCCACAGGAGTGTTGCTAC...ATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR CCA 90 bp GCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTAGCAACACTCCTGTaGGAGCCCACAGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: AGVADGLLFLAAFQIPLPVATLL*EPTGSG
Trigger: CCCTGAGCCTGTGGGCTCCCACAGGAGTGTTGCTAC...TGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR CCA 90 bp TTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTGCCTGGAGTCTCCATaGAGGCTCAGCGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: FISCSGRALPTVSSSWLHCLESP*RLSVRA
Trigger: GGCCCTCACGCTGAGCCTCCATGGAGACTCCAGGCA...ATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTTGCCTGGAGTCTCCATaGAGGCTCAGCGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GRCRRSPLLGCISNPTSSCLESP*RLSVRA
Trigger: GGCCCTCACGCTGAGCCTCCATGGAGACTCCAGGCA...ACTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCATGGAGGTGGGCGTCCTaGAGTCTCCATGGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: FLVPGGRCRRSPLLGCISWRWAS*SLHGGS
Trigger: TGAGCCTCCATGGAGACTCCAGGACGCCCACCTCCA...TGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468348.1
CDS-3UTR TCA 90 bp GGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCGGACTCGGAGGAATCTaGGGCTCAGGGTTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: GRALPTVSSSWLHFKSHFGLGGI*GSGFPQ
Trigger: TTGAGGAAACCCTGAGCCTCAGATTCCTCCGAGTCC...GAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp TTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATAGCCACATCCCCGCTTaGCAAGCCTCTCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FISCSGRALPTVSSSWLHSHIPA*QASQQE
Trigger: CTCCTGCTGAGAGGCTTGTCAAGCGGGGATGTGGCT...ATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp TCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCTCCGGGAGAACGGTaGGAAACCAGCTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SCSGRALPTVSSSWLHFKSPGER*ETSSSA
Trigger: TGCAGAGGAGCTGGTTTCTCACCGTTCTCCCGGAGA...TTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp CGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTCTCCGGGAGAACGGTaGGAAACCAGCTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RALPTVSSSWLHFKSHFQSPGER*ETSSSA
Trigger: TGCAGAGGAGCTGGTTTCTCACCGTTCTCCCGGAGA...CTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp TTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTGTGGCTTTCAGCACTaGGGGCCAAGGTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: FISCSGRALPTVSSSWLHCGFQH*GPRWAL
Trigger: CAGAGCCCACCTTGGCCCTCAGTGCTGAAAGCCACA...ATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR TCA 90 bp TTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTCCCTCCACACTGTCTTaGAGCTCAGGAGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: LFLVPGGRCRRSPLLGCIPSTLS*SSGGLW
Trigger: CCACAGGCCTCCTGAGCTTCAAGACAGTGTGGAGGG...AATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR TCA 90 bp TTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATCGACTCTGGCTGGAATaGCACTCCTGGCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: FISCSGRALPTVSSSWLHRLWLE*HSWQSL
Trigger: CAGGCTCTGCCAGGAGTGTCATTCCAGCCAGAGTCG...ATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418570.6
CDS-3UTR GCA 90 bp GGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTGAGGGTCAGAGCCGGGTaGGTTGGCAAGACTGGACGT +
Preference number: 4 (lower is better)
Translates to: GVADGLLFLAAFQIPLPVRVRAG*VGKTGR
Trigger: ACGTCCAGTCTTGCCAACGCACCCGGCTCTGACCCT...CACTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR GCA 90 bp TCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAAGGGTGTCAGAAGAGCTaGTGGGCGAACAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SCSGRALPTVSSSWLHFKGCQKS*WANRFW
Trigger: CCAGAACCTGTTCGCCCAGCAGCTCTTCTGACACCC...TTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCAAGAGAAGAATCCAGGTaGTCAGGGGACCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: FRAGVADGLLFLAAFQIPREESR*SGDLQV
Trigger: CACCTGGAGGTCCCCTGACCACCTGGATTCTTCTCT...TGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS-3UTR CCA 90 bp TTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAACAGTGGACGCTTTCCTaGCCCAGCCTTGACCTTAGC +
Preference number: 4 (lower is better)
Translates to: FLFRAGVADGLLFLAAFQQWTLS*PSLDLS
Trigger: GCTAAGGTCAAGGCTGGGCCAGGAAAGCGTCCACTG...TTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACACAGTCCCATCAGGCTaGCGTCTTCAAGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: SGRALPTVSSSWLHFKSHTVPSG*RLQEKP
Trigger: TGGCTTCTCTTGAAGACGCCAGCCTGATGGGACTGT...GTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAGTTCCTCCGACTTCTTaGCATCGCTGGACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: FLVPGGRCRRSPLLGCISVPPTS*HRWTWS
Trigger: GCTCCAGGTCCAGCGATGCCAAGAAGTCGGAGGAAC...TGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTGTCCAAGCCCCTTTTTaGCCAGTGCGTCGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GRCRRSPLLGCISNPTSSVQAPF*PVRRKA
Trigger: GGCCTTCCGACGCACTGGCCAAAAAGGGGCTTGGAC...ACTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTGGTCCAAGCCCCTTTTTaGCCAGTGCGTCGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GVADGLLFLAAFQIPLPVVQAPF*PVRRKA
Trigger: GGCCTTCCGACGCACTGGCCAAAAAGGGGCTTGGAC...CACTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACGGCTGTTTGCAGGAATaGTCCAAGCCCCTTTTTGGC +
Preference number: 4 (lower is better)
Translates to: SGRALPTVSSSWLHFKSHGCLQE*SKPLFG
Trigger: GCCAAAAAGGGGCTTGGACCATTCCTGCAAACAGCC...GTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTAACTCCTCACTGGCTTaGCCGGGCTCCCCCATGATG +
Preference number: 4 (lower is better)
Translates to: LFLVPGGRCRRSPLLGCINSSLA*PGSPMM
Trigger: CATCATGGGGGAGCCCGGCCAAGCCAGTGAGGAGTT...AATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp CGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTTGGGGTGGAGAATGTaGCATCCCTCGCTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RALPTVSSSWLHFKSHFQLGWRM*HPSLAG
Trigger: TCCTGCCAGCGAGGGATGCCACATTCTCCACCCCAA...CTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp CGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGGCCTCACACTTGGGGTaGAGAATGTGGCATCCCTCG +
Preference number: 4 (lower is better)
Translates to: RALPTVSSSWLHFKSHFQASHLG*RMWHPS
Trigger: CGAGGGATGCCACATTCTCCACCCCAAGTGTGAGGC...CTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp CTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATGCCTCACACTTGGGGTaGAGAATGTGGCATCCCTCG +
Preference number: 4 (lower is better)
Translates to: LVPGGRCRRSPLLGCISNASHLG*RMWHPS
Trigger: CGAGGGATGCCACATTCTCCACCCCAAGTGTGAGGC...ATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TCCAGGGAAGCACTGAGTGAGTGCTCTTCCGGCCCAGAACACTGTACCCAGCCATGGCTGCCTCACACTTaGGGTGGAGAATGTGGCATC +
Preference number: 4 (lower is better)
Translates to: SREALSECSSGPEHCTQPWLPHT*GGECGI
Trigger: GATGCCACATTCTCCACCCCAAGTGTGAGGCAGCCA...TGGCTGGGTACAGTGTTCTGGGCCGGAAGAGCACTCACTCAGTGCTTCCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACGCGAACAGGTTCTGGTaGCAGAGGTTCCATAGGAAG +
Preference number: 4 (lower is better)
Translates to: SGRALPTVSSSWLHFKSHANRFW*QRFHRK
Trigger: CTTCCTATGGAACCTCTGCCACCAGAACCTGTTCGC...GTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTGGCTCAGGGTTTGCGTaGATGGAGGGCTGGACGTGT +
Preference number: 4 (lower is better)
Translates to: LFLVPGGRCRRSPLLGCIGSGFA*MEGWTC
Trigger: ACACGTCCAGCCCTCCATCCACGCAAACCCTGAGCC...AATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp CGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTACCTCCGACTCTGGCTaGAATGACACTCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: RAGVADGLLFLAAFQIPLTSDSG*NDTPGR
Trigger: TCTGCCAGGAGTGTCATTCCAGCCAGAGTCGGAGGT...AAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418570.6
CDS-3UTR TCA 90 bp TATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTTGTCCGTGTCTGACCTaGAGGAGAGGCTCCATGGGA +
Preference number: 4 (lower is better)
Translates to: YFLFRAGVADGLLFLAAFCPCLT*RRGSMG
Trigger: TCCCATGGAGCCTCTCCTTCAGGTCAGACACGGACA...AAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS-3UTR TCA 90 bp GGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTTGGCTTGTCCGTGTCTaGCCTGAAGGAGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GRCRRSPLLGCISNPTSSWLVRV*PEGEAP
Trigger: TGGAGCCTCTCCTTCAGGTCAGACACGGACAAGCCA...ACTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS-3UTR TCA 90 bp TCCAGGGAAGCACTGAGTGAGTGCTCTTCCGGCCCAGAACACTGTACCCAGCCACTCTGCTTGGGGATGTaGACTAAGACCTCCGACTCT +
Preference number: 4 (lower is better)
Translates to: SREALSECSSGPEHCTQPLCLGM*TKTSDS
Trigger: AGAGTCGGAGGTCTTAGTTCACATCCCCAAGCAGAG...TGGCTGGGTACAGTGTTCTGGGCCGGAAGAGCACTCACTCAGTGCTTCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp CTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATGGACTCGGAGGAATCTaGGGCTCAGGGTTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LVPGGRCRRSPLLGCISNGLGGI*GSGFPQ
Trigger: TTGAGGAAACCCTGAGCCTCAGATTCCTCCGAGTCC...ATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp GGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGGCGACTCTGTTCCTaGACCCACACACTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: GGRCRRSPLLGCISNPTSRRLCS*THTLEE
Trigger: TTCTTCCAGTGTGTGGGTTCAGGAACAGAGTCGCCT...GGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp TTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAAAATCCCACTTCCAGTaGTGGGTCTGCCTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: FLFRAGVADGLLFLAAFQKSHFQ*WVCLEV
Trigger: CACCTCCAGGCAGACCCATCACTGGAAGTGGGATTT...TTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR GCA 90 bp TATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTGCCGGTTTGGCTGTTTaGAGGAATGGTCCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: YFLFRAGVADGLLFLAAFAGLAV*RNGPSP
Trigger: GGGGCTTGGACCATTCCTGCAAACAGCCAAACCGGC...AAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATGAAGGAGAGGCTCCATaGGAACACCGTGGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: FISCSGRALPTVSSSWLHEGEAP*EHRGLN
Trigger: GTTCAGCCCACGGTGTTCCCATGGAGCCTCTCCTTC...ATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS-3UTR CCA 90 bp GGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTCAGTGGACGCTTTCCTaGCCCAGCCTTGACCTTAGC +
Preference number: 4 (lower is better)
Translates to: GRCRRSPLLGCISNPTSSQWTLS*PSLDLS
Trigger: GCTAAGGTCAAGGCTGGGCCAGGAAAGCGTCCACTG...ACTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTCCTTGTCTCGGGCTTTaGACGGTGACAGTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LFLVPGGRCRRSPLLGCIPCLGL*TVTVVA
Trigger: TGCCACCACTGTCACCGTCCAAAGCCCGAGACAAGG...AATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTGACCTCCGACTCTGGCTaGAATGACACCGGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: GVADGLLFLAAFQIPLPVTSDSG*NDTGGQ
Trigger: TTGCCCACCGGTGTCATTCCAGCCAGAGTCGGAGGT...CACTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS-3UTR CCA 90 bp TATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGGGAGGAAGCAGCAGGTaGCACTCCCGCTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: YLFISCSGRALPTVSSSWGGSSR*HSRWRG
Trigger: ACCCCTCCAGCGGGAGTGCCACCTGCTGCTTCCTCC...CCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCAGGCCCCTCTATGTCCTaGCTTGGTTCTGAGGATGAA +
Preference number: 4 (lower is better)
Translates to: FRAGVADGLLFLAAFQIPGPSMS*LGSEDE
Trigger: TTCATCCTCAGAACCAAGCCAGGACATAGAGGGGCC...TGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp CGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTGCGAACAGGTTCTGGTaGCAGAGGTTCCATAGGAAG +
Preference number: 4 (lower is better)
Translates to: RAGVADGLLFLAAFQIPLANRFW*QRFHRK
Trigger: CTTCCTATGGAACCTCTGCCACCAGAACCTGTTCGC...AAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATGGGCGAACAGGTTCTaGTGGCAGAGGTTCCATAGG +
Preference number: 4 (lower is better)
Translates to: SCSGRALPTVSSSWLHFKWANRF*WQRFHR
Trigger: CCTATGGAACCTCTGCCACCAGAACCTGTTCGCCCA...TTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCATGTCAGAAGAGCTGCTaGGCGAACAGGTTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: AGVADGLLFLAAFQIPLPCQKSC*ANRFWW
Trigger: CCACCAGAACCTGTTCGCCCAGCAGCTCTTCTGACA...TGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp TTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAACTCTGCTTGGGGATGTaGACTAAGACCTCCGACTCT +
Preference number: 4 (lower is better)
Translates to: FLFRAGVADGLLFLAAFQLCLGM*TKTSDS
Trigger: AGAGTCGGAGGTCTTAGTTCACATCCCCAAGCAGAG...TTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp CGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGAGGCGACTCTGTTCCTaGACCCACACACTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: RALPTVSSSWLHFKSHFQRRLCS*THTLEE
Trigger: TTCTTCCAGTGTGTGGGTTCAGGAACAGAGTCGCCT...CTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp TTTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTAGGCCAGCCAGGGGCTaGCTCCAGGTATCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: FIYLFLVPGGRCRRSPLLRPARG*LQVSGL
Trigger: CAGGCCCGATACCTGGAGTCAGCCCCTGGCTGGCCT...AAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp GGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTAAATCCCACTTCCAGTaGTGGGTCTGCCTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GRCRRSPLLGCISNPTSSKSHFQ*WVCLEV
Trigger: CACCTCCAGGCAGACCCATCACTGGAAGTGGGATTT...ACTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR TCA 90 bp GGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTGAAATCCCACTTCCAGTaGTGGGTCTGCCTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GVADGLLFLAAFQIPLPVKSHFQ*WVCLEV
Trigger: CACCTCCAGGCAGACCCATCACTGGAAGTGGGATTT...CACTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR GCA 90 bp TATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGGCACTGGGGTCTGGCTaGCTCACACTTGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: YLFISCSGRALPTVSSSWALGSG*LTLGVE
Trigger: CTCCACCCCAAGTGTGAGGCAGCCAGACCCCAGTGC...CCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCAAGTGCAAGGTCCTaGCCAGCCACCGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LFIYFLFRAGVADGLLFLASARS*PATASA
Trigger: GGCTGAGGCGGTGGCTGGCCAGGACCTTGCACTTGC...CAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS-3UTR CCA 90 bp TTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCAAAGGGACAGCAGCCATaGAGTCTGTCTATTGTCCCT +
Preference number: 4 (lower is better)
Translates to: FRAGVADGLLFLAAFQIPKGQQP*SLSIVP
Trigger: AGGGACAATAGACAGACTCCATGGCTGCTGTCCCTT...TGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp CGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTAAGATGTTGGACTGGTaGACTCGGAGGAATCTGAGG +
Preference number: 4 (lower is better)
Translates to: RAGVADGLLFLAAFQIPLKMLDW*TRRNLR
Trigger: CCTCAGATTCCTCCGAGTCCACCAGTCCAACATCTT...AAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAACCTGAACCCACACACTaGAAGAAGCTCTCCACTGTC +
Preference number: 4 (lower is better)
Translates to: SCSGRALPTVSSSWLHFKPEPTH*KKLSTV
Trigger: GACAGTGGAGAGCTTCTTCCAGTGTGTGGGTTCAGG...TTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCACCTGAACCCACACACTaGAAGAAGCTCTCCACTGTC +
Preference number: 4 (lower is better)
Translates to: AGVADGLLFLAAFQIPLPPEPTH*KKLSTV
Trigger: GACAGTGGAGAGCTTCTTCCAGTGTGTGGGTTCAGG...TGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGAGGGGTCTCTGGTCCTaGGGATGGTGGGGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: YLFISCSGRALPTVSSSWRGLWS*GWWGGS
Trigger: ACTCCCTCCCCACCATCCCCAGGACCAGAGACCCCT...CCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp ATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCGGCTGTTTGCAGGAATaGTCCAAGCCCCTTTTTGGC +
Preference number: 4 (lower is better)
Translates to: ISCSGRALPTVSSSWLHFGCLQE*SKPLFG
Trigger: GCCAAAAAGGGGCTTGGACCATTCCTGCAAACAGCC...GAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCACTCTTCTCGCCGGTTTaGCTGTTTGCAGGAATGGTC +
Preference number: 4 (lower is better)
Translates to: AGVADGLLFLAAFQIPLPLFSPV*LFAGMV
Trigger: GACCATTCCTGCAAACAGCCAAACCGGCGAGAAGAG...TGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATATGGAGGCAGATGTCTaGCCTCTTCTCGCCGGTTTG +
Preference number: 4 (lower is better)
Translates to: FISCSGRALPTVSSSWLHMEADV*PLLAGL
Trigger: CAAACCGGCGAGAAGAGGCCAGACATCTGCCTCCAT...ATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp ATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCGGCCCCTCTATGTCCTaGCTTGGTTCTGAGGATGAA +
Preference number: 4 (lower is better)
Translates to: ISCSGRALPTVSSSWLHFGPSMS*LGSEDE
Trigger: TTCATCCTCAGAACCAAGCCAGGACATAGAGGGGCC...GAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTTGTCAGAAGAGCTGCTaGGCGAACAGGTTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GRCRRSPLLGCISNPTSSCQKSC*ANRFWW
Trigger: CCACCAGAACCTGTTCGCCCAGCAGCTCTTCTGACA...ACTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp TTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCACAGGGTCATGTAGTCTaGGAAGCACTCAACTGTGTC +
Preference number: 4 (lower is better)
Translates to: FLVPGGRCRRSPLLGCISQGHVV*EALNCV
Trigger: GACACAGTTGAGTGCTTCTCAGACTACATGACCCTG...TGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS-3UTR TCA 90 bp CGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGAAGGAAGTCACCGTCTaGAGCCAGATGCAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: RALPTVSSSWLHFKSHFQKEVTV*SQMQEV
Trigger: TACTTCCTGCATCTGGCTTCAGACGGTGACTTCCTT...CTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS-3UTR TCA 90 bp CGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTTGTAGGAACCTCTTTTaGCTAGACCCAGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RAGVADGLLFLAAFQIPLCRNLF*LDPVSA
Trigger: AGCAGAGACTGGGTCTAGTCAAAAGAGGTTCCTACA...AAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp GGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCTGTAGGAACCTCTTTTaGCTAGACCCAGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GRALPTVSSSWLHFKSHFCRNLF*LDPVSA
Trigger: AGCAGAGACTGGGTCTAGTCAAAAGAGGTTCCTACA...GAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR GCA 90 bp TTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGATGAAAGGTCCATGTaGCCCCTGGCCCCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LFIYFLFRAGVADGLLFLDERSM*PLAPSL
Trigger: CAGGGAGGGGGCCAGGGGGCACATGGACCTTTCATC...CAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR GCA 90 bp TTTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTCAGCGGGGTACCGGCTaGCTGGAGTCTCCATGGAGG +
Preference number: 4 (lower is better)
Translates to: FIYLFLVPGGRCRRSPLLQRGTG*LESPWR
Trigger: CCTCCATGGAGACTCCAGGCAGCCGGTACCCCGCTG...AAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGAGGGGCCGGGAGACCTaGATGAACATGGGCCCACAG +
Preference number: 4 (lower is better)
Translates to: LFIYFLFRAGVADGLLFLRGRET*MNMGPQ
Trigger: CTGTGGGCCCATGTTCATCCAGGTCTCCCGGCCCCT...CAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAAGGGACAGCAGCCATaGAGTCTGTCTATTGTCCCT +
Preference number: 4 (lower is better)
Translates to: FLVPGGRCRRSPLLGCISKGQQP*SLSIVP
Trigger: AGGGACAATAGACAGACTCCATGGCTGCTGTCCCTT...TGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp ATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAGATGTTGGACTGGTaGACTCGGAGGAATCTGAGG +
Preference number: 4 (lower is better)
Translates to: ISCSGRALPTVSSSWLHFKMLDW*TRRNLR
Trigger: CCTCAGATTCCTCCGAGTCCACCAGTCCAACATCTT...GAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGCGCCAGGGACTAGCCTaGACACCCTCTACAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LFIYFLFRAGVADGLLFLRQGLA*TPSTGS
Trigger: GGAGCCTGTAGAGGGTGTCCAGGCTAGTCCCTGGCG...CAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGTCCAGGTATCGGGCCTaGTCTGGCCCTCCCACAGAT +
Preference number: 4 (lower is better)
Translates to: YLFISCSGRALPTVSSSWSRYRA*SGPPTD
Trigger: ATCTGTGGGAGGGCCAGACCAGGCCCGATACCTGGA...CCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCAGGGTTTGCGTGGATaGAGGGCTGGACGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: YLFISCSGRALPTVSSSWQGLRG*RAGRVC
Trigger: GCACACACGTCCAGCCCTCCATCCACGCAAACCCTG...CCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp TCCAGGGAAGCACTGAGTGAGTGCTCTTCCGGCCCAGAACACTGTACCCAGCCACCCATCACCCCTTTCTaGAATATTCTGATTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SREALSECSSGPEHCTQPPITPF*NILISS
Trigger: GCTGGAAATCAGAATATTTCAGAAAGGGGTGATGGG...TGGCTGGGTACAGTGTTCTGGGCCGGAAGAGCACTCACTCAGTGCTTCCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS-3UTR TCA 90 bp TTTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTCATGGAGGCTCAGCGTaGGGGCCTCTCAGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: FIYLFLVPGGRCRRSPLLHGGSA*GPLRKP
Trigger: GGGCTTTCTGAGAGGCCCTCACGCTGAGCCTCCATG...AAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR GCA 90 bp TTTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGCACTGGGGTCTGGCTaGCTCACACTTGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: FIYLFLVPGGRCRRSPLLALGSG*LTLGVE
Trigger: CTCCACCCCAAGTGTGAGGCAGCCAGACCCCAGTGC...AAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR GCA 90 bp TATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGTTCCATAGGAAGAACTaGCAGGGGCGCTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: YLFISCSGRALPTVSSSWFHRKN*QGRCQP
Trigger: AGGCTGGCAGCGCCCCTGGCAGTTCTTCCTATGGAA...CCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR GCA 90 bp TCCAGGGAAGCACTGAGTGAGTGCTCTTCCGGCCCAGAACACTGTACCCAGCCATCTCCTCTTCTTGGCTaGATTTCAAATCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: SREALSECSSGPEHCTQPSPLLG*ISNPTS
Trigger: GGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGA...TGGCTGGGTACAGTGTTCTGGGCCGGAAGAGCACTCACTCAGTGCTTCCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp CGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTATAAAGATGTTGGACTaGTGGACTCGGAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: RAGVADGLLFLAAFQIPLIKMLD*WTRRNL
Trigger: CAGATTCCTCCGAGTCCACCAGTCCAACATCTTTAT...AAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTACTTCTTGGCATCGCTaGACCTGGAGCACCCCGGCC +
Preference number: 4 (lower is better)
Translates to: FIYLFLVPGGRCRRSPLLTSWHR*TWSTPA
Trigger: GGCCGGGGTGCTCCAGGTCCAGCGATGCCAAGAAGT...AAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAACGGTCTCCTCTTCTTaGCTGCATTTCAAATCCCAC +
Preference number: 4 (lower is better)
Translates to: FLFRAGVADGLLFLAAFQTVSSS*LHFKSH
Trigger: GTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGT...TTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR TCA 90 bp TTTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTCGGCCGCCGGAATGCTaGCCACCACAAAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: FIYLFLVPGGRCRRSPLLRPPEC*PPQSPC
Trigger: ACAAGGACTTTGTGGTGGTCAGCATTCCGGCGGCCG...AAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR GCA 90 bp CGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTCTCCTCTTCTTGGCTaGATTTCAAATCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: RALPTVSSSWLHFKSHFQSPLLG*ISNPTS
Trigger: GGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGA...CTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR CCA 90 bp TTTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTAACATGGGCCCACAGTaGACGCTTTCCTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: FIYLFLVPGGRCRRSPLLNMGPQ*TLSWPS
Trigger: GCTGGGCCAGGAAAGCGTCCACTGTGGGCCCATGTT...AAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTCGAGAAAGCCATTCCTaGGCAGCTGGTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: FIYLFLVPGGRCRRSPLLRESHS*AAGPAA
Trigger: GGCTGCAGGACCAGCTGCCCAGGAATGGCTTTCTCG...AAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGGAGCTTGCACCACTCTaGGGAGAATGGAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: YLFISCSGRALPTVSSSWELAPL*GEWRQM
Trigger: CATCTGCCTCCATTCTCCCCAGAGTGGTGCAAGCTC...CCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGTTGGGGTGGAGAATGTaGCATCCCTCGCTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LFIYFLFRAGVADGLLFLLGWRM*HPSLAG
Trigger: TCCTGCCAGCGAGGGATGCCACATTCTCCACCCCAA...CAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTACGGTCTCCTCTTCTTaGCTGCATTTCAAATCCCAC +
Preference number: 4 (lower is better)
Translates to: LFLVPGGRCRRSPLLGCITVSSS*LHFKSH
Trigger: GTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGT...AATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR CCA 90 bp TTTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTAGTGATGGGTCTGCCTaGAGGTGGGCGTCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: FIYLFLVPGGRCRRSPLLSDGSA*RWASWS
Trigger: ACTCCAGGACGCCCACCTCCAGGCAGACCCATCACT...AAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468348.1
CDS-3UTR TCA 90 bp TTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGACCTTCAGTCAGGGTaGCAGATGGTCCTGAGACCA +
Preference number: 4 (lower is better)
Translates to: LFIYFLFRAGVADGLLFLDLQSG*QMVLRP
Trigger: TGGTCTCAGGACCATCTGTCACCCTGACTGAAGGTC...CAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp GGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTATAAAGATGTTGGACTaGTGGACTCGGAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: GRCRRSPLLGCISNPTSSIKMLD*WTRRNL
Trigger: CAGATTCCTCCGAGTCCACCAGTCCAACATCTTTAT...ACTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGATGGAGGCAGATGTCTaGCCTCTTCTCGCCGGTTTG +
Preference number: 4 (lower is better)
Translates to: LFIYFLFRAGVADGLLFLMEADV*PLLAGL
Trigger: CAAACCGGCGAGAAGAGGCCAGACATCTGCCTCCAT...CAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGTGGGCGAACAGGTTCTaGTGGCAGAGGTTCCATAGG +
Preference number: 4 (lower is better)
Translates to: LFIYFLFRAGVADGLLFLWANRF*WQRFHR
Trigger: CCTATGGAACCTCTGCCACCAGAACCTGTTCGCCCA...CAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR TCA 90 bp TTTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGACCTTCAGTCAGGGTaGCAGATGGTCCTGAGACCA +
Preference number: 4 (lower is better)
Translates to: FIYLFLVPGGRCRRSPLLDLQSG*QMVLRP
Trigger: TGGTCTCAGGACCATCTGTCACCCTGACTGAAGGTC...AAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGACAGTCCCATCAGGCTaGCGTCTTCAAGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LFIYFLFRAGVADGLLFLTVPSG*RLQEKP
Trigger: TGGCTTCTCTTGAAGACGCCAGCCTGATGGGACTGT...CAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTTGGCTGCCTCACACTTaGGGTGGAGAATGTGGCATC +
Preference number: 4 (lower is better)
Translates to: FIYLFLVPGGRCRRSPLLWLPHT*GGECGI
Trigger: GATGCCACATTCTCCACCCCAAGTGTGAGGCAGCCA...AAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CCA 90 bp TTTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTCTCTTCTCGCCGGTTTaGCTGTTTGCAGGAATGGTC +
Preference number: 4 (lower is better)
Translates to: FIYLFLVPGGRCRRSPLLLFSPV*LFAGMV
Trigger: GACCATTCCTGCAAACAGCCAAACCGGCGAGAAGAG...AAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR GCA 90 bp GGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTGTTCCAGCCTGTAATTTaGTTTCTCTTTCTGCACAAA +
Preference number: 4 (lower is better)
Translates to: GVADGLLFLAAFQIPLPVFQPVI*FLFLHK
Trigger: TTTGTGCAGAAAGAGAAAGCAAATTACAGGCTGGAA...CACTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS-3UTR CCA 90 bp TTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGACGGTCTCCTCTTCTTaGCTGCATTTCAAATCCCAC +
Preference number: 4 (lower is better)
Translates to: LFIYFLFRAGVADGLLFLTVSSS*LHFKSH
Trigger: GTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGT...CAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR TCA 90 bp TTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGAAGCAGGCCGAGTATTaGACTCGAAAAAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LFIYFLFRAGVADGLLFLKQAEY*TRKRKS
Trigger: TGACTTCCTTTTTCGAGTTCAATACTCGGCCTGCTT...CAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS-3UTR GCA 90 bp TTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGTTTGCTTTCTCTTTCTaGACAAAGCAGGCCGAGTAT +
Preference number: 4 (lower is better)
Translates to: LFIYFLFRAGVADGLLFLFAFSF*TKQAEY
Trigger: ATACTCGGCCTGCTTTGTGCAGAAAGAGAAAGCAAA...CAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS CCA 90 bp GTGGCCCGCCAGGGCCTCGCCAATGGCTGGAACTCCTCACTGGCTTaGCCGGGCTCCCCCATGATGGGCTCAGGTGCAGCCACATCCCCG +
Preference number: 5 (lower is better)
Translates to: VARQGLANGWNSSLA*PGSPMMGSGAATSP
Trigger: CGGGGATGTGGCTGCACCTGAGCCCATCATGGGGGAGCCCGGCCAAGCCAGTGAGGAGTTCCAGCCATTGGCGAGGCCCTGGCGGGCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS CCA 90 bp GCCGGGTGCGTTGGCAAGACTGGACGTGGCCGCCAGGGACTAGCCTaGACACCCTCTACAGGCTCCGAGGGGAGCGTGGCTGGAGGTGTG +
Preference number: 5 (lower is better)
Translates to: AGCVGKTGRGRQGLA*TPSTGSEGSVAGGV
Trigger: CACACCTCCAGCCACGCTCCCCTCGGAGCCTGTAGAGGGTGTCCAGGCTAGTCCCTGGCGGCCACGTCCAGTCTTGCCAACGCACCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS CCA 90 bp GGACACGGGCAGGGTCAGAGCCGGGTGCGTTGGCAAGACTGGACGTaGCCGCCAGGGACTAGCCTGGACACCCTCTACAGGCTCCGAGGG +
Preference number: 5 (lower is better)
Translates to: GHGQGQSRVRWQDWT*PPGTSLDTLYRLRG
Trigger: CCCTCGGAGCCTGTAGAGGGTGTCCAGGCTAGTCCCTGGCGGCCACGTCCAGTCTTGCCAACGCACCCGGCTCTGACCCTGCCCGTGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS CCA 90 bp AGCTCCTCTGCAGCCAGTGTGGCCCGCCAGGGCCTCGCCAATGGCTaGAACTCCTCACTGGCTTGGCCGGGCTCCCCCATGATGGGCTCA +
Preference number: 5 (lower is better)
Translates to: SSSAASVARQGLANG*NSSLAWPGSPMMGS
Trigger: TGAGCCCATCATGGGGGAGCCCGGCCAAGCCAGTGAGGAGTTCCAGCCATTGGCGAGGCCCTGGCGGGCCACACTGGCTGCAGAGGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS CCA 90 bp AACCAGCTCCTCTGCAGCCAGTGTGGCCCGCCAGGGCCTCGCCAATaGCTGGAACTCCTCACTGGCTTGGCCGGGCTCCCCCATGATGGG +
Preference number: 5 (lower is better)
Translates to: NQLLCSQCGPPGPRQ*LELLTGLAGLPHDG
Trigger: CCCATCATGGGGGAGCCCGGCCAAGCCAGTGAGGAGTTCCAGCCATTGGCGAGGCCCTGGCGGGCCACACTGGCTGCAGAGGAGCTGGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS TCA 90 bp ACCTCCGTTCCAGAGCACGTTTCCTGGGGCTCTCCGGGAGAACGGTaGGAAACCAGCTCCTCTGCAGCCAGTGTGGCCCGCCAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: TSVPEHVSWGSPGER*ETSSSAASVARQGL
Trigger: GAGGCCCTGGCGGGCCACACTGGCTGCAGAGGAGCTGGTTTCTCACCGTTCTCCCGGAGAGCCCCAGGAAACGTGCTCTGGAACGGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS GCA 90 bp GAAGGAGAGGAGGCATCTGAGGACACGGGCAGGGTCAGAGCCGGGTaGGTTGGCAAGACTGGACGTGGCCGCCAGGGACTAGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: EGEEASEDTGRVRAG*VGKTGRGRQGLAWT
Trigger: TGTCCAGGCTAGTCCCTGGCGGCCACGTCCAGTCTTGCCAACGCACCCGGCTCTGACCCTGCCCGTGTCCTCAGATGCCTCCTCTCCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS GCA 90 bp CGTTTCCTGGGGCTCTCCGGGAGAACGGTGAGAAACCAGCTCCTCTaGAGCCAGTGTGGCCCGCCAGGGCCTCGCCAATGGCTGGAACTC +
Preference number: 5 (lower is better)
Translates to: RFLGLSGRTVRNQLL*SQCGPPGPRQWLEL
Trigger: GAGTTCCAGCCATTGGCGAGGCCCTGGCGGGCCACACTGGCTGCAGAGGAGCTGGTTTCTCACCGTTCTCCCGGAGAGCCCCAGGAAACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS TCA 90 bp TCCGTGTCTGACCTGAAGGAGAGGCTCCATGGGAACACCGTGGGCTaGACACAGGCAAGCCAGACGGCCCAGGCAAGTGCTGGGGACCCC +
Preference number: 5 (lower is better)
Translates to: SVSDLKERLHGNTVG*TQASQTAQASAGDP
Trigger: GGGGTCCCCAGCACTTGCCTGGGCCGTCTGGCTTGCCTGTGTTCAGCCCACGGTGTTCCCATGGAGCCTCTCCTTCAGGTCAGACACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS CCA 90 bp GCATCCCTCGCTGGCAGGATGGAGAGTCCCGGCCCCTCTATGTCCTaGCTTGGTTCTGAGGATGAAAGGTCCATGTGCCCCCTGGCCCCC +
Preference number: 5 (lower is better)
Translates to: ASLAGRMESPGPSMS*LGSEDERSMCPLAP
Trigger: GGGGGCCAGGGGGCACATGGACCTTTCATCCTCAGAACCAAGCCAGGACATAGAGGGGCCGGGACTCTCCATCCTGCCAGCGAGGGATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS GCA 90 bp GGATGCAGCCATAGACGTGCTTTGGCCAGTGCGTCGGAAGGCCGGTaGAGGAGGTCCCGAGAAAGCCATTCCTGGGCAGCTGGTCCTGCA +
Preference number: 5 (lower is better)
Translates to: GCSHRRALASASEGR*RRSRESHSWAAGPA
Trigger: TGCAGGACCAGCTGCCCAGGAATGGCTTTCTCGGGACCTCCTGCACCGGCCTTCCGACGCACTGGCCAAAGCACGTCTATGGCTGCATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476357.1
CDS-3UTR CAA 90 bp TCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTGTTCCGGGCGGGCGTaGCCGACGGTCTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: SGRALPTVSSSWLHFKSHCSGRA*PTVSSS
Trigger: AGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACA...GTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS TCA 90 bp GACACTCCTGGCAGAGCCTGCTGCCCACCACTGACCTCCCACCTCTaGAGAAGGCCTTGTCTCGGGCTTTGGACGGTGACAGTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: DTPGRACCPPLTSHL*RRPCLGLWTVTVVA
Trigger: TGCCACCACTGTCACCGTCCAAAGCCCGAGACAAGGCCTTCTTCAGAGGTGGGAGGTCAGTGGTGGGCAGCAGGCTCTGCCAGGAGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418570.6
CDS GCA 90 bp AGGAATGGTCCAAGCCCCTTTTTGGCCAGTGCGTCGGAAGGCCGGTaGAGGAGGTCCCGAGAAAGCCATTCCTGGGCAGCTGGTCCTGCA +
Preference number: 5 (lower is better)
Translates to: RNGPSPFLASASEGR*RRSRESHSWAAGPA
Trigger: TGCAGGACCAGCTGCCCAGGAATGGCTTTCTCGGGACCTCCTGCACCGGCCTTCCGACGCACTGGCCAAAAAGGGGCTTGGACCATTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS CCA 90 bp GTCTGGCTGCCTCACACTTGGGGTGGAGAATGTGGCATCCCTCGCTaGCAGGATGGAGAGTCCCGGCCCCTCTATGTCCTGGCTTGGTTC +
Preference number: 5 (lower is better)
Translates to: VWLPHTWGGECGIPR*QDGESRPLYVLAWF
Trigger: GAACCAAGCCAGGACATAGAGGGGCCGGGACTCTCCATCCTGCCAGCGAGGGATGCCACATTCTCCACCCCAAGTGTGAGGCAGCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS CCA 90 bp GGAAGGGGTATTCAAGCTCCACCAGGCTGGGTAGCAACACTCCTGTaGGAGCCCACAGGCTCAGGGTTTGCGTGGATGGAGGGCTGGACG +
Preference number: 5 (lower is better)
Translates to: GRGIQAPPGWVATLL*EPTGSGFAWMEGWT
Trigger: CGTCCAGCCCTCCATCCACGCAAACCCTGAGCCTGTGGGCTCCCACAGGAGTGTTGCTACCCAGCCTGGTGGAGCTTGAATACCCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS-3UTR CAA 90 bp TCCAGGGAAGCACTGAGTGAGTGCTCTTCCGGCCCAGAACACTGTACCCAGCCATGTTCCGGGCGGGCGTaGCCGACGGTCTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: SREALSECSSGPEHCTQPCSGRA*PTVSSS
Trigger: AGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACA...TGGCTGGGTACAGTGTTCTGGGCCGGAAGAGCACTCACTCAGTGCTTCCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS TCA 90 bp GAGGCTCAGCGTGAGGGCCTCTCAGAAAGCCCCTCCACACTGTCTTaGAGCTCAGGAGGCCTGTGGCTTTCAGCACTGAGGGCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: EAQREGLSESPSTLS*SSGGLWLSALRAKV
Trigger: CACCTTGGCCCTCAGTGCTGAAAGCCACAGGCCTCCTGAGCTTCAAGACAGTGTGGAGGGGCTTTCTGAGAGGCCCTCACGCTGAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
ENST00000476357.1
ENST00000520253.1
CDS CCA 90 bp GCCTCACACTTGGGGTGGAGAATGTGGCATCCCTCGCTGGCAGGATaGAGAGTCCCGGCCCCTCTATGTCCTGGCTTGGTTCTGAGGATG +
Preference number: 5 (lower is better)
Translates to: ASHLGWRMWHPSLAG*RVPAPLCPGLVLRM
Trigger: CATCCTCAGAACCAAGCCAGGACATAGAGGGGCCGGGACTCTCCATCCTGCCAGCGAGGGATGCCACATTCTCCACCCCAAGTGTGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS-3UTR CAA 90 bp TTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCAGCCTTGTCTCGGGCTTaGGACGGTGACAGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: FRAGVADGLLFLAAFQIPALSRA*DGDSGG
Trigger: GCCACCACTGTCACCGTCCAAAGCCCGAGACAAGGC...TGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp TTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCATCAGAGCCGGGTGCGTaGGCAAGACTGGACGTGGCC +
Preference number: 5 (lower is better)
Translates to: FLVPGGRCRRSPLLGCISSEPGA*ARLDVA
Trigger: GGCCACGTCCAGTCTTGCCAACGCACCCGGCTCTGA...TGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp TCCAGGGAAGCACTGAGTGAGTGCTCTTCCGGCCCAGAACACTGTACCCAGCCAGGACTTCCTGGAGACTaGGCGGGGTCCTGTTCAGGC +
Preference number: 5 (lower is better)
Translates to: SREALSECSSGPEHCTQPGLPGD*AGSCSG
Trigger: GCCTGAACAGGACCCCGCCAAGTCTCCAGGAAGTCC...TGGCTGGGTACAGTGTTCTGGGCCGGAAGAGCACTCACTCAGTGCTTCCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp GTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCCAGCCACATCCCCGCTaGACAAGCCTCTCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: VPGGRCRRSPLLGCISNPQPHPR*TSLSAG
Trigger: TCCTGCTGAGAGGCTTGTCAAGCGGGGATGTGGCTG...GGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp CGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTGTTCCGGGCGGGCGTaGCCGACGGTCTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: RALPTVSSSWLHFKSHFQCSGRA*PTVSSS
Trigger: AGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACA...CTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR CAA 90 bp GTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCGCTGCAGAGCTTGGCTaGTCCGTGTCTGACCTGAAG +
Preference number: 5 (lower is better)
Translates to: VPGGRCRRSPLLGCISNPAAELG*SVSDLK
Trigger: CTTCAGGTCAGACACGGACAAGCCAAGCTCTGCAGC...GGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS-3UTR CAA 90 bp CGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGGCCTTGTCTCGGGCTTaGGACGGTGACAGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: RALPTVSSSWLHFKSHFQALSRA*DGDSGG
Trigger: GCCACCACTGTCACCGTCCAAAGCCCGAGACAAGGC...CTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp CGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTGGTTCCTCCGACTTCTaGGCATCGCTGGACCTGGAG +
Preference number: 5 (lower is better)
Translates to: RAGVADGLLFLAAFQIPLGSSDF*ASLDLE
Trigger: CTCCAGGTCCAGCGATGCCAAGAAGTCGGAGGAACC...AAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp GCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGGTCCAAGCCCCTTTTaGGCCAGTGCGTCGGAAGGC +
Preference number: 5 (lower is better)
Translates to: AGVADGLLFLAAFQIPLPGPSPF*ASASEG
Trigger: GCCTTCCGACGCACTGGCCAAAAAGGGGCTTGGACC...TGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp TTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAGGTCCAAGCCCCTTTTaGGCCAGTGCGTCGGAAGGC +
Preference number: 5 (lower is better)
Translates to: FLFRAGVADGLLFLAAFQGPSPF*ASASEG
Trigger: GCCTTCCGACGCACTGGCCAAAAAGGGGCTTGGACC...TTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp TATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTTCAGAGCCGGGTGCGTaGGCAAGACTGGACGTGGCC +
Preference number: 5 (lower is better)
Translates to: YFLFRAGVADGLLFLAAFSEPGA*ARLDVA
Trigger: GGCCACGTCCAGTCTTGCCAACGCACCCGGCTCTGA...AAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp CTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATGGACTTCCTGGAGACTaGGCGGGGTCCTGTTCAGGC +
Preference number: 5 (lower is better)
Translates to: LVPGGRCRRSPLLGCISNGLPGD*AGSCSG
Trigger: GCCTGAACAGGACCCCGCCAAGTCTCCAGGAAGTCC...ATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp TCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAAGAACTCCTCACTGGCTaGGCCGGGCTCCCCCATGAT +
Preference number: 5 (lower is better)
Translates to: SCSGRALPTVSSSWLHFKELLTG*AGLPHD
Trigger: ATCATGGGGGAGCCCGGCCAAGCCAGTGAGGAGTTC...TTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp TTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAGAACTCCTCACTGGCTaGGCCGGGCTCCCCCATGAT +
Preference number: 5 (lower is better)
Translates to: FLVPGGRCRRSPLLGCISELLTG*AGLPHD
Trigger: ATCATGGGGGAGCCCGGCCAAGCCAGTGAGGAGTTC...TGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS GCA 90 bp ACTTCTTGGGGACCAGACTCTTTGGAGGAAACCATGGGCAGAGGATaGAGCCATAGACGTGCTTTGGCCAGTGCGTCGGAAGGCCGGTGC +
Preference number: 5 (lower is better)
Translates to: TSWGPDSLEETMGRG*SHRRALASASEGRC
Trigger: GCACCGGCCTTCCGACGCACTGGCCAAAGCACGTCTATGGCTGCATCCTCTGCCCATGGTTTCCTCCAAAGAGTCTGGTCCCCAAGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476357.1
CDS CCA 90 bp CTCTGGGGAGAATGGAGGCAGATGTCTGGCCTCTTCTCGCCGGTTTaGCTGTTTGCAGGAATGGTCCAAGCCCCTTCTGGGAGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: LWGEWRQMSGLFSPV*LFAGMVQAPSGRKQ
Trigger: CTGCTTCCTCCCAGAAGGGGCTTGGACCATTCCTGCAAACAGCCAAACCGGCGAGAAGAGGCCAGACATCTGCCTCCATTCTCCCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520253.1
CDS-3UTR CAA 90 bp CGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGCCTCCACGTGGCTCCTaGGGATCCACAGGGTCATGT +
Preference number: 5 (lower is better)
Translates to: RALPTVSSSWLHFKSHFQPPRGS*GSTGSC
Trigger: ACATGACCCTGTGGATCCCAAGGAGCCACGTGGAGG...CTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS-3UTR CAA 90 bp CGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCATGGAGTCTGTCTATaGTCCCTCCACAGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: RAGVADGLLFLAAFQIPLHGVCL*SLHRGR
Trigger: CCTGCCCCTGTGGAGGGACAATAGACAGACTCCATG...AAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp GGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCCTCTGAAGAAGGCCTaGTCTCGGGCTTTGGACGGT +
Preference number: 5 (lower is better)
Translates to: GRALPTVSSSWLHFKSHFPLKKA*SRALDG
Trigger: ACCGTCCAAAGCCCGAGACAAGGCCTTCTTCAGAGG...GAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp TTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCATCCTCAGTGCAGCAGTaGAGGCAGGCGACTCTGTTC +
Preference number: 5 (lower is better)
Translates to: FRAGVADGLLFLAAFQIPSSVQQ*RQATLF
Trigger: GAACAGAGTCGCCTGCCTCAACTGCTGCACTGAGGA...TGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp TTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAACGCCGGTTTGGCTGTTaGCAGGAATGGTCCAAGCCC +
Preference number: 5 (lower is better)
Translates to: FLFRAGVADGLLFLAAFQRRFGC*QEWSKP
Trigger: GGGCTTGGACCATTCCTGCAAACAGCCAAACCGGCG...TTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp GTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCCCTCTTCTCGCCGGTTaGGCTGTTTGCAGGAATGGT +
Preference number: 5 (lower is better)
Translates to: VPGGRCRRSPLLGCISNPPLLAG*AVCRNG
Trigger: ACCATTCCTGCAAACAGCCAAACCGGCGAGAAGAGG...GGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp TTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTCCACAGGCTCAGGGTTaGCGTGGATGGAGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: LFLVPGGRCRRSPLLGCIPQAQG*RGWRAG
Trigger: TCCAGCCCTCCATCCACGCAAACCCTGAGCCTGTGG...AATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp GGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTGCCACAGGCTCAGGGTTaGCGTGGATGGAGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: GVADGLLFLAAFQIPLPVPQAQG*RGWRAG
Trigger: TCCAGCCCTCCATCCACGCAAACCCTGAGCCTGTGG...CACTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS GCA 90 bp AGAATGGAGGCAGATGTCTGGCCTCTTCTCGCCGGTTTGGCTGTTTaGAGGAATGGTCCAAGCCCCTTTTTGGCCAGTGCGTCGGAAGGC +
Preference number: 5 (lower is better)
Translates to: RMEADVWPLLAGLAV*RNGPSPFLASASEG
Trigger: GCCTTCCGACGCACTGGCCAAAAAGGGGCTTGGACCATTCCTGCAAACAGCCAAACCGGCGAGAAGAGGCCAGACATCTGCCTCCATTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp TTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCATTTCCTGGCCCAGCCTaGACCTTAGCATCGGACACT +
Preference number: 5 (lower is better)
Translates to: FRAGVADGLLFLAAFQIPFPGPA*TLASDT
Trigger: AGTGTCCGATGCTAAGGTCAAGGCTGGGCCAGGAAA...TGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp TCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAACCTCTGAAGAAGGCCTaGTCTCGGGCTTTGGACGGT +
Preference number: 5 (lower is better)
Translates to: SCSGRALPTVSSSWLHFKPLKKA*SRALDG
Trigger: ACCGTCCAAAGCCCGAGACAAGGCCTTCTTCAGAGG...TTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp TATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTGGTTCCTCCGACTTCTaGGCATCGCTGGACCTGGAG +
Preference number: 5 (lower is better)
Translates to: YFLFRAGVADGLLFLAAFGSSDF*ASLDLE
Trigger: CTCCAGGTCCAGCGATGCCAAGAAGTCGGAGGAACC...AAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp TCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTACCCTATAGAAAGCTaGTGTTCCCGGGGTTCCTCC +
Preference number: 5 (lower is better)
Translates to: SGRALPTVSSSWLHFKSHYPIES*CSRGSS
Trigger: GGAGGAACCCCGGGAACACAAGCTTTCTATAGGGTA...GTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp TTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCATCCTCAGTGCAGCAGTaGAGGCAGGCGACTCTGTTC +
Preference number: 5 (lower is better)
Translates to: FLVPGGRCRRSPLLGCISSSVQQ*RQATLF
Trigger: GAACAGAGTCGCCTGCCTCAACTGCTGCACTGAGGA...TGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp GGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTCGCCGGTTTGGCTGTTaGCAGGAATGGTCCAAGCCC +
Preference number: 5 (lower is better)
Translates to: GRCRRSPLLGCISNPTSSRRFGC*QEWSKP
Trigger: GGGCTTGGACCATTCCTGCAAACAGCCAAACCGGCG...ACTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp TTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATGGGACCTCGCTGAGCTaGCACCACTCTGGGGAGAAT +
Preference number: 5 (lower is better)
Translates to: FISCSGRALPTVSSSWLHGTSLS*HHSGEN
Trigger: ATTCTCCCCAGAGTGGTGCAAGCTCAGCGAGGTCCC...ATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp GGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTCAGCCACATCCCCGCTaGACAAGCCTCTCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: GRCRRSPLLGCISNPTSSQPHPR*TSLSAG
Trigger: TCCTGCTGAGAGGCTTGTCAAGCGGGGATGTGGCTG...ACTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp GGTGGGCGTCTGGGGGTCCACCTTTCCAGGGAAGCACTGAGTGAGTGCTCTTCCCCTCTATGTCCTGGCTaGGTTCTGAGGATGAAAGGT +
Preference number: 5 (lower is better)
Translates to: GGRLGVHLSREALSECSSPLCPG*VLRMKG
Trigger: ACCTTTCATCCTCAGAACCAAGCCAGGACATAGAGG...GGAAGAGCACTCACTCAGTGCTTCCCTGGAAAGGTGGACCCCCAGACGCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS CCA 90 bp CTCTGGGGAGAATGGAGGCAGATGTCTGGCCTCTTCTCGCCGGTTTaGCTGTTTGCAGGAATGGTCCAAGCCCCTTCTTCACCAAGAGAG +
Preference number: 5 (lower is better)
Translates to: LWGEWRQMSGLFSPV*LFAGMVQAPSSPRE
Trigger: CTCTCTTGGTGAAGAAGGGGCTTGGACCATTCCTGCAAACAGCCAAACCGGCGAGAAGAGGCCAGACATCTGCCTCCATTCTCCCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476357.1
CDS-3UTR CAA 90 bp TATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCATGGAGTCTGTCTATaGTCCCTCCACAGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: YFLFRAGVADGLLFLAAFHGVCL*SLHRGR
Trigger: CCTGCCCCTGTGGAGGGACAATAGACAGACTCCATG...AAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp TTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATCTGGCTGCCTCACACTaGGGGTGGAGAATGTGGCAT +
Preference number: 5 (lower is better)
Translates to: FISCSGRALPTVSSSWLHLAASH*GWRMWH
Trigger: ATGCCACATTCTCCACCCCAAGTGTGAGGCAGCCAG...ATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp TCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACGACGGTCTCCTCTTCTaGGCTGCATTTCAAATCCCA +
Preference number: 5 (lower is better)
Translates to: SGRALPTVSSSWLHFKSHDGLLF*AAFQIP
Trigger: TGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTC...GTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR CAA 90 bp TTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTTTCCTGGCCCAGCCTaGACCTTAGCATCGGACACT +
Preference number: 5 (lower is better)
Translates to: LFLVPGGRCRRSPLLGCIFPGPA*TLASDT
Trigger: AGTGTCCGATGCTAAGGTCAAGGCTGGGCCAGGAAA...AATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp GCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCATACCCTATAGAAAGCTaGTGTTCCCGGGGTTCCTCC +
Preference number: 5 (lower is better)
Translates to: AGVADGLLFLAAFQIPLPYPIES*CSRGSS
Trigger: GGAGGAACCCCGGGAACACAAGCTTTCTATAGGGTA...TGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp CGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTGACGGTCTCCTCTTCTaGGCTGCATTTCAAATCCCA +
Preference number: 5 (lower is better)
Translates to: RAGVADGLLFLAAFQIPLDGLLF*AAFQIP
Trigger: TGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTC...AAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS TCA 90 bp CTGTTAAAACTTCTGCTGCAGAGCTTGGCTTGTCCGTGTCTGACCTaGAGGAGAGGCTCCATGGGAACACCGTGGGCTGAACACAGGCAA +
Preference number: 5 (lower is better)
Translates to: LLKLLLQSLACPCLT*RRGSMGTPWAEHRQ
Trigger: TTGCCTGTGTTCAGCCCACGGTGTTCCCATGGAGCCTCTCCTTCAGGTCAGACACGGACAAGCCAAGCTCTGCAGCAGAAGTTTTAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS GCA 90 bp AGAATGGAGGCAGATGTCTGGCCTCTTCTCGCCGGTTTGGCTGTTTaGAGGAATGGTCCAAGCCCCTTCTTCACCAAGAGAGAAGTGGAG +
Preference number: 5 (lower is better)
Translates to: RMEADVWPLLAGLAV*RNGPSPFFTKREVE
Trigger: CTCCACTTCTCTCTTGGTGAAGAAGGGGCTTGGACCATTCCTGCAAACAGCCAAACCGGCGAGAAGAGGCCAGACATCTGCCTCCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476357.1
CDS-3UTR CAA 90 bp CGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGGACGGTCTCCTCTTCTaGGCTGCATTTCAAATCCCA +
Preference number: 5 (lower is better)
Translates to: RALPTVSSSWLHFKSHFQDGLLF*AAFQIP
Trigger: TGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTC...CTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS TCA 90 bp CAGCCCCTCCACGTGGCTCCTTGGGATCCACAGGGTCATGTAGTCTaGGAAGCACTCAACTGTGTCTGTCCAACAAGAAGATGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: QPLHVAPWDPQGHVV*EALNCVCPTRRCFC
Trigger: ACAGAAGCATCTTCTTGTTGGACAGACACAGTTGAGTGCTTCTCAGACTACATGACCCTGTGGATCCCAAGGAGCCACGTGGAGGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000520253.1
CDS TCA 90 bp AGAGAAAAAGCATTAGAAACAAGAACACATGGGCTCCGGCTGCCCTaGGAATCTCAACCCAAAGATGGGTTCGAGGGACCGGGTGCGGTG +
Preference number: 5 (lower is better)
Translates to: REKALETRTHGLRLP*ESQPKDGFEGPGAV
Trigger: CACCGCACCCGGTCCCTCGAACCCATCTTTGGGTTGAGATTCTCAGGGCAGCCGGAGCCCATGTGTTCTTGTTTCTAATGCTTTTTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476357.1
CDS-3UTR CAA 90 bp GGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAAAGCAGGCCGAGTATaGAACTCGAAAAAGGAAGTC +
Preference number: 5 (lower is better)
Translates to: GGRCRRSPLLGCISNPTSKAGRV*NSKKEV
Trigger: GACTTCCTTTTTCGAGTTCAATACTCGGCCTGCTTT...GGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS-3UTR CAA 90 bp TCCAGGGAAGCACTGAGTGAGTGCTCTTCCGGCCCAGAACACTGTACCCAGCCAACCACCACAAAGTCCTaGTTCTCAGTCACCATAAAG +
Preference number: 5 (lower is better)
Translates to: SREALSECSSGPEHCTQPTTTKS*FSVTIK
Trigger: CTTTATGGTGACTGAGAACAAGGACTTTGTGGTGGT...TGGCTGGGTACAGTGTTCTGGGCCGGAAGAGCACTCACTCAGTGCTTCCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp TTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGGGACCTCGCTGAGCTaGCACCACTCTGGGGAGAAT +
Preference number: 5 (lower is better)
Translates to: LFIYFLFRAGVADGLLFLGTSLS*HHSGEN
Trigger: ATTCTCCCCAGAGTGGTGCAAGCTCAGCGAGGTCCC...CAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp TATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGGCTGCCTCACACTaGGGGTGGAGAATGTGGCAT +
Preference number: 5 (lower is better)
Translates to: YLFISCSGRALPTVSSSWLAASH*GWRMWH
Trigger: ATGCCACATTCTCCACCCCAAGTGTGAGGCAGCCAG...CCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp GGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCTTATTTATTTATTTCTaGTTCCGGGCGGGCGTTGCC +
Preference number: 5 (lower is better)
Translates to: GRALPTVSSSWLHFKSHFLFIYF*FRAGVA
Trigger: GGCAACGCCCGCCCGGAACAAGAAATAAATAAATAA...GAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR CAA 90 bp CGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTTTATTTATTTATTTCTaGTTCCGGGCGGGCGTTGCC +
Preference number: 5 (lower is better)
Translates to: RAGVADGLLFLAAFQIPLLFIYF*FRAGVA
Trigger: GGCAACGCCCGCCCGGAACAAGAAATAAATAAATAA...AAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR CAA 90 bp TTTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTCTTCTGCTGCAGAGCTaGGCTTGTCCGTGTCTGACC +
Preference number: 5 (lower is better)
Translates to: FIYLFLVPGGRCRRSPLLLLLQS*ACPCLT
Trigger: GGTCAGACACGGACAAGCCAAGCTCTGCAGCAGAAG...AAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS-3UTR CAA 90 bp GGCGTTGCCGACGGTCTCCTCTTCTTGGCTGCATTTCAAATCCCACTTCCAGTGACCACCACAAAGTCCTaGTTCTCAGTCACCATAAAG +
Preference number: 5 (lower is better)
Translates to: GVADGLLFLAAFQIPLPVTTTKS*FSVTIK
Trigger: CTTTATGGTGACTGAGAACAAGGACTTTGTGGTGGT...CACTGGAAGTGGGATTTGAAATGCAGCCAAGAAGAGGAGACCGTCGGCAACGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp TTTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTCCTCTTCTCGCCGGTTaGGCTGTTTGCAGGAATGGT +
Preference number: 5 (lower is better)
Translates to: FIYLFLVPGGRCRRSPLLPLLAG*AVCRNG
Trigger: ACCATTCCTGCAAACAGCCAAACCGGCGAGAAGAGG...AAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp TATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGCCTCTATGTCCTGGCTaGGTTCTGAGGATGAAAGGT +
Preference number: 5 (lower is better)
Translates to: YLFISCSGRALPTVSSSWPLCPG*VLRMKG
Trigger: ACCTTTCATCCTCAGAACCAAGCCAGGACATAGAGG...CCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS-3UTR CAA 90 bp TATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTGGTTATTTATTTATTTCTaGTTCCGGGCGGGCGTTGCC +
Preference number: 5 (lower is better)
Translates to: YLFISCSGRALPTVSSSWLFIYF*FRAGVA
Trigger: GGCAACGCCCGCCCGGAACAAGAAATAAATAAATAA...CCAAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
CDS-3UTR CAA 90 bp TTTATTTATTTATTTCTTGTTCCGGGCGGGCGTTGCCGACGGTCTCCTCTTCTTTTTCCAGCCTGTAATTaGCTTTCTCTTTCTGCACAA +
Preference number: 5 (lower is better)
Translates to: FIYLFLVPGGRCRRSPLLFPACN*LSLSAQ
Trigger: TTGTGCAGAAAGAGAAAGCAAATTACAGGCTGGAAA...AAGAAGAGGAGACCGTCGGCAACGCCCGCCCGGAACAAGAAATAAATAAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS CCA 72 bp GCAGCCAGTGTGGCCCGCCAGGGCCTCGCCAATGGCTaGAACTCCTCACTGGCTTGGCCGGGCTCCCCCATG +
Preference number: 6 (lower is better)
Translates to: AASVARQGLANG*NSSLAWPGSPM
Trigger: CATGGGGGAGCCCGGCCAAGCCAGTGAGGAGTTCCAGCCATTGGCGAGGCCCTGGCGGGCCACACTGGCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS CCA 72 bp CTCTGCAGCCAGTGTGGCCCGCCAGGGCCTCGCCAATaGCTGGAACTCCTCACTGGCTTGGCCGGGCTCCCC +
Preference number: 6 (lower is better)
Translates to: LCSQCGPPGPRQ*LELLTGLAGLP
Trigger: GGGGAGCCCGGCCAAGCCAGTGAGGAGTTCCAGCCATTGGCGAGGCCCTGGCGGGCCACACTGGCTGCAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS CAA 90 bp TGTGGCCCGCCAGGGCCTCGCCAATGGCTGGAACTCCTCACTGGCTaGGCCGGGCTCCCCCATGATGGGCTCAGGTGCAGCCACATCCCC +
Preference number: 6 (lower is better)
Translates to: CGPPGPRQWLELLTG*AGLPHDGLRCSHIP
Trigger: GGGGATGTGGCTGCACCTGAGCCCATCATGGGGGAGCCCGGCCAAGCCAGTGAGGAGTTCCAGCCATTGGCGAGGCCCTGGCGGGCCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS CCA 72 bp CACGGGCAGGGTCAGAGCCGGGTGCGTTGGCAAGACTaGACGTGGCCGCCAGGGACTAGCCTGGACACCCTC +
Preference number: 6 (lower is better)
Translates to: HGQGQSRVRWQD*TWPPGTSLDTL
Trigger: GAGGGTGTCCAGGCTAGTCCCTGGCGGCCACGTCCAGTCTTGCCAACGCACCCGGCTCTGACCCTGCCCGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS GCA 72 bp GGGCTCTCCGGGAGAACGGTGAGAAACCAGCTCCTCTaGAGCCAGTGTGGCCCGCCAGGGCCTCGCCAATGG +
Preference number: 6 (lower is better)
Translates to: GLSGRTVRNQLL*SQCGPPGPRQW
Trigger: CCATTGGCGAGGCCCTGGCGGGCCACACTGGCTGCAGAGGAGCTGGTTTCTCACCGTTCTCCCGGAGAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS CCA 72 bp CAGGGCCTCGCCAATGGCTGGAACTCCTCACTGGCTTaGCCGGGCTCCCCCATGATGGGCTCAGGTGCAGCC +
Preference number: 6 (lower is better)
Translates to: QGLANGWNSSLA*PGSPMMGSGAA
Trigger: GGCTGCACCTGAGCCCATCATGGGGGAGCCCGGCCAAGCCAGTGAGGAGTTCCAGCCATTGGCGAGGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS CAA 72 bp CCAGGGCCTCGCCAATGGCTGGAACTCCTCACTGGCTaGGCCGGGCTCCCCCATGATGGGCTCAGGTGCAGC +
Preference number: 6 (lower is better)
Translates to: PGPRQWLELLTG*AGLPHDGLRCS
Trigger: GCTGCACCTGAGCCCATCATGGGGGAGCCCGGCCAAGCCAGTGAGGAGTTCCAGCCATTGGCGAGGCCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS GCA 72 bp GAGGCATCTGAGGACACGGGCAGGGTCAGAGCCGGGTaGGTTGGCAAGACTGGACGTGGCCGCCAGGGACTA +
Preference number: 6 (lower is better)
Translates to: EASEDTGRVRAG*VGKTGRGRQGL
Trigger: TAGTCCCTGGCGGCCACGTCCAGTCTTGCCAACGCACCCGGCTCTGACCCTGCCCGTGTCCTCAGATGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS CCA 72 bp GTTGGCAAGACTGGACGTGGCCGCCAGGGACTAGCCTaGACACCCTCTACAGGCTCCGAGGGGAGCGTGGCT +
Preference number: 6 (lower is better)
Translates to: VGKTGRGRQGLA*TPSTGSEGSVA
Trigger: AGCCACGCTCCCCTCGGAGCCTGTAGAGGGTGTCCAGGCTAGTCCCTGGCGGCCACGTCCAGTCTTGCCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS CCA 72 bp CAGGGTCAGAGCCGGGTGCGTTGGCAAGACTGGACGTaGCCGCCAGGGACTAGCCTGGACACCCTCTACAGG +
Preference number: 6 (lower is better)
Translates to: QGQSRVRWQDWT*PPGTSLDTLYR
Trigger: CCTGTAGAGGGTGTCCAGGCTAGTCCCTGGCGGCCACGTCCAGTCTTGCCAACGCACCCGGCTCTGACCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS TCA 72 bp GCTGGAACTCCTCACTGGCTTGGCCGGGCTCCCCCATaGTGGGCTCAGGTGCAGCCACATCCCCGCTTGACA +
Preference number: 6 (lower is better)
Translates to: AGTPHWLGRAPP*WAQVQPHPRLT
Trigger: TGTCAAGCGGGGATGTGGCTGCACCTGAGCCCATCATGGGGGAGCCCGGCCAAGCCAGTGAGGAGTTCCAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS TCA 72 bp CCAGAGCACGTTTCCTGGGGCTCTCCGGGAGAACGGTaGGAAACCAGCTCCTCTGCAGCCAGTGTGGCCCGC +
Preference number: 6 (lower is better)
Translates to: PEHVSWGSPGER*ETSSSAASVAR
Trigger: GCGGGCCACACTGGCTGCAGAGGAGCTGGTTTCTCACCGTTCTCCCGGAGAGCCCCAGGAAACGTGCTCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS CCA 72 bp TGGGGTCTGGCTGCCTCACACTTGGGGTGGAGAATGTaGCATCCCTCGCTGGCAGGATGGAGAGTCCCGGCC +
Preference number: 6 (lower is better)
Translates to: WGLAASHLGWRM*HPSLAGWRVPA
Trigger: GGCCGGGACTCTCCATCCTGCCAGCGAGGGATGCCACATTCTCCACCCCAAGTGTGAGGCAGCCAGACCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS GCA 72 bp CCAAGCCCCTTTTTGGCCAGTGCGTCGGAAGGCCGGTaGAGGAGGTCCCGAGAAAGCCATTCCTGGGCAGCT +
Preference number: 6 (lower is better)
Translates to: PSPFLASASEGR*RRSRESHSWAA
Trigger: AGCTGCCCAGGAATGGCTTTCTCGGGACCTCCTGCACCGGCCTTCCGACGCACTGGCCAAAAAGGGGCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS CCA 72 bp GGGGAGGCTGGGGACCTCGCTGAGCTTGCACCACTCTaGGGAGAATGGAGGCAGATGTCTGGCCTCTTCTCG +
Preference number: 6 (lower is better)
Translates to: GEAGDLAELAPL*GEWRQMSGLFS
Trigger: CGAGAAGAGGCCAGACATCTGCCTCCATTCTCCCCAGAGTGGTGCAAGCTCAGCGAGGTCCCCAGCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS CCA 72 bp GCCAGGCACTGGGGTCTGGCTGCCTCACACTTGGGGTaGAGAATGTGGCATCCCTCGCTGGCAGGATGGAGA +
Preference number: 6 (lower is better)
Translates to: ARHWGLAASHLG*RMWHPSLAGWR
Trigger: TCTCCATCCTGCCAGCGAGGGATGCCACATTCTCCACCCCAAGTGTGAGGCAGCCAGACCCCAGTGCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS CCA 72 bp TGGGCTCCGGCTGCCCTGAGAATCTCAACCCAAAGATaGGTTCGAGGGACCGGGTGCGGTGGCTCACGACTG +
Preference number: 6 (lower is better)
Translates to: WAPAALRISTQR*VRGTGCGGSRL
Trigger: CAGTCGTGAGCCACCGCACCCGGTCCCTCGAACCCATCTTTGGGTTGAGATTCTCAGGGCAGCCGGAGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476357.1
CDS TCA 72 bp GACCTGAAGGAGAGGCTCCATGGGAACACCGTGGGCTaGACACAGGCAAGCCAGACGGCCCAGGCAAGTGCT +
Preference number: 6 (lower is better)
Translates to: DLKERLHGNTVG*TQASQTAQASA
Trigger: AGCACTTGCCTGGGCCGTCTGGCTTGCCTGTGTTCAGCCCACGGTGTTCCCATGGAGCCTCTCCTTCAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS TCA 72 bp GGCAGAGCCTGCTGCCCACCACTGACCTCCCACCTCTaGAGAAGGCCTTGTCTCGGGCTTTGGACGGTGACA +
Preference number: 6 (lower is better)
Translates to: GRACCPPLTSHL*RRPCLGLWTVT
Trigger: TGTCACCGTCCAAAGCCCGAGACAAGGCCTTCTTCAGAGGTGGGAGGTCAGTGGTGGGCAGCAGGCTCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418570.6
CDS GCA 72 bp CATAGACGTGCTTTGGCCAGTGCGTCGGAAGGCCGGTaGAGGAGGTCCCGAGAAAGCCATTCCTGGGCAGCT +
Preference number: 6 (lower is better)
Translates to: HRRALASASEGR*RRSRESHSWAA
Trigger: AGCTGCCCAGGAATGGCTTTCTCGGGACCTCCTGCACCGGCCTTCCGACGCACTGGCCAAAGCACGTCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476357.1
CDS CCA 72 bp CCTCACACTTGGGGTGGAGAATGTGGCATCCCTCGCTaGCAGGATGGAGAGTCCCGGCCCCTCTATGTCCTG +
Preference number: 6 (lower is better)
Translates to: PHTWGGECGIPR*QDGESRPLYVL
Trigger: CAGGACATAGAGGGGCCGGGACTCTCCATCCTGCCAGCGAGGGATGCCACATTCTCCACCCCAAGTGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS CCA 72 bp GCTGGCAGGATGGAGAGTCCCGGCCCCTCTATGTCCTaGCTTGGTTCTGAGGATGAAAGGTCCATGTGCCCC +
Preference number: 6 (lower is better)
Translates to: AGRMESPGPSMS*LGSEDERSMCP
Trigger: GGGGCACATGGACCTTTCATCCTCAGAACCAAGCCAGGACATAGAGGGGCCGGGACTCTCCATCCTGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS CCA 72 bp TTGGGGTGGAGAATGTGGCATCCCTCGCTGGCAGGATaGAGAGTCCCGGCCCCTCTATGTCCTGGCTTGGTT +
Preference number: 6 (lower is better)
Translates to: LGWRMWHPSLAG*RVPAPLCPGLV
Trigger: AACCAAGCCAGGACATAGAGGGGCCGGGACTCTCCATCCTGCCAGCGAGGGATGCCACATTCTCCACCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS CCA 72 bp GGGTGTCAGAAGAGCTGCTGGGCGAACAGGTTCTGGTaGCAGAGGTTCCATAGGAAGAACTGCCAGGGGCGC +
Preference number: 6 (lower is better)
Translates to: GCQKSCWANRFW*QRFHRKNCQGR
Trigger: GCGCCCCTGGCAGTTCTTCCTATGGAACCTCTGCCACCAGAACCTGTTCGCCCAGCAGCTCTTCTGACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS CAA 90 bp CAGAGCCTGCTGCCCACCACTGACCTCCCACCTCTGAAGAAGGCCTaGTCTCGGGCTTTGGACGGTGACAGTGGTGGCATTCATGTCCAC +
Preference number: 6 (lower is better)
Translates to: QSLLPTTDLPPLKKA*SRALDGDSGGIHVH
Trigger: GTGGACATGAATGCCACCACTGTCACCGTCCAAAGCCCGAGACAAGGCCTTCTTCAGAGGTGGGAGGTCAGTGGTGGGCAGCAGGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418570.6
CDS TCA 72 bp CGTGAGGGCCTCTCAGAAAGCCCCTCCACACTGTCTTaGAGCTCAGGAGGCCTGTGGCTTTCAGCACTGAGG +
Preference number: 6 (lower is better)
Translates to: REGLSESPSTLS*SSGGLWLSALR
Trigger: CCTCAGTGCTGAAAGCCACAGGCCTCCTGAGCTTCAAGACAGTGTGGAGGGGCTTTCTGAGAGGCCCTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000468348.1
ENST00000476357.1
ENST00000520253.1
CDS CCA 72 bp CTGGCCTCTTCTCGCCGGTTTGGCTGTTTGCAGGAATaGTCCAAGCCCCTTTTTGGCCAGTGCGTCGGAAGG +
Preference number: 6 (lower is better)
Translates to: LASSRRFGCLQE*SKPLFGQCVGR
Trigger: CCTTCCGACGCACTGGCCAAAAAGGGGCTTGGACCATTCCTGCAAACAGCCAAACCGGCGAGAAGAGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS CCA 72 bp ACAAGCCTCTCAGCAGGAGGGGACTTCCTGGAGACTTaGCGGGGTCCTGTTCAGGCCTCACAGTTCCTAGAC +
Preference number: 6 (lower is better)
Translates to: TSLSAGGDFLET*RGPVQASQFLD
Trigger: GTCTAGGAACTGTGAGGCCTGAACAGGACCCCGCCAAGTCTCCAGGAAGTCCCCTCCTGCTGAGAGGCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS CCA 72 bp ATTCAAGCTCCACCAGGCTGGGTAGCAACACTCCTGTaGGAGCCCACAGGCTCAGGGTTTGCGTGGATGGAG +
Preference number: 6 (lower is better)
Translates to: IQAPPGWVATLL*EPTGSGFAWME
Trigger: CTCCATCCACGCAAACCCTGAGCCTGTGGGCTCCCACAGGAGTGTTGCTACCCAGCCTGGTGGAGCTTGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS CAA 72 bp CTGCCCACCACTGACCTCCCACCTCTGAAGAAGGCCTaGTCTCGGGCTTTGGACGGTGACAGTGGTGGCATT +
Preference number: 6 (lower is better)
Translates to: LPTTDLPPLKKA*SRALDGDSGGI
Trigger: AATGCCACCACTGTCACCGTCCAAAGCCCGAGACAAGGCCTTCTTCAGAGGTGGGAGGTCAGTGGTGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418570.6
CDS CAA 90 bp GAGAATGGAGGCAGATGTCTGGCCTCTTCTCGCCGGTTTGGCTGTTaGCAGGAATGGTCCAAGCCCCTTCTGGGAGGAAGCAGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: ENGGRCLASSRRFGC*QEWSKPLLGGSSRW
Trigger: CCACCTGCTGCTTCCTCCCAGAAGGGGCTTGGACCATTCCTGCAAACAGCCAAACCGGCGAGAAGAGGCCAGACATCTGCCTCCATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520253.1
CDS CAA 90 bp GAGAATGGAGGCAGATGTCTGGCCTCTTCTCGCCGGTTTGGCTGTTaGCAGGAATGGTCCAAGCCCCTTTTTGGCCAGTGCGTCGGAAGG +
Preference number: 6 (lower is better)
Translates to: ENGGRCLASSRRFGC*QEWSKPLFGQCVGR
Trigger: CCTTCCGACGCACTGGCCAAAAAGGGGCTTGGACCATTCCTGCAAACAGCCAAACCGGCGAGAAGAGGCCAGACATCTGCCTCCATTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS CAA 90 bp ACTCTGGGGAGAATGGAGGCAGATGTCTGGCCTCTTCTCGCCGGTTaGGCTGTTTGCAGGAATGGTCCAAGCCCCTTCTGGGAGGAAGCA +
Preference number: 6 (lower is better)
Translates to: TLGRMEADVWPLLAG*AVCRNGPSPFWEEA
Trigger: TGCTTCCTCCCAGAAGGGGCTTGGACCATTCCTGCAAACAGCCAAACCGGCGAGAAGAGGCCAGACATCTGCCTCCATTCTCCCCAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520253.1
CDS GCA 72 bp GCAGATGTCTGGCCTCTTCTCGCCGGTTTGGCTGTTTaGAGGAATGGTCCAAGCCCCTTTTTGGCCAGTGCG +
Preference number: 6 (lower is better)
Translates to: ADVWPLLAGLAV*RNGPSPFLASA
Trigger: CGCACTGGCCAAAAAGGGGCTTGGACCATTCCTGCAAACAGCCAAACCGGCGAGAAGAGGCCAGACATCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS CCA 72 bp TTCGGGTGTCAGAAGAGCTGCTGGGCGAACAGGTTCTaGTGGCAGAGGTTCCATAGGAAGAACTGCCAGGGG +
Preference number: 6 (lower is better)
Translates to: FGCQKSCWANRF*WQRFHRKNCQG
Trigger: CCCCTGGCAGTTCTTCCTATGGAACCTCTGCCACCAGAACCTGTTCGCCCAGCAGCTCTTCTGACACCCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS CCA 72 bp AGGGCCTCAGGCCCAGCTGGGTCTACCGATACTTCTTaGGGACCAGACTCTTTGGAGGAAACCATGGGCAGA +
Preference number: 6 (lower is better)
Translates to: RASGPAGSTDTS*GPDSLEETMGR
Trigger: TCTGCCCATGGTTTCCTCCAAAGAGTCTGGTCCCCAAGAAGTATCGGTAGACCCAGCTGGGCCTGAGGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476357.1
CDS CCA 72 bp GAATGGAGGCAGATGTCTGGCCTCTTCTCGCCGGTTTaGCTGTTTGCAGGAATGGTCCAAGCCCCTTCTGGG +
Preference number: 6 (lower is better)
Translates to: EWRQMSGLFSPV*LFAGMVQAPSG
Trigger: CCCAGAAGGGGCTTGGACCATTCCTGCAAACAGCCAAACCGGCGAGAAGAGGCCAGACATCTGCCTCCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520253.1
CDS CAA 72 bp GGCAGATGTCTGGCCTCTTCTCGCCGGTTTGGCTGTTaGCAGGAATGGTCCAAGCCCCTTTTTGGCCAGTGC +
Preference number: 6 (lower is better)
Translates to: GRCLASSRRFGC*QEWSKPLFGQC
Trigger: GCACTGGCCAAAAAGGGGCTTGGACCATTCCTGCAAACAGCCAAACCGGCGAGAAGAGGCCAGACATCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS CAA 72 bp AAGGGCCTCAGGCCCAGCTGGGTCTACCGATACTTCTaGGGGACCAGACTCTTTGGAGGAAACCATGGGCAG +
Preference number: 6 (lower is better)
Translates to: KGLRPSWVYRYF*GTRLFGGNHGQ
Trigger: CTGCCCATGGTTTCCTCCAAAGAGTCTGGTCCCCAAGAAGTATCGGTAGACCCAGCTGGGCCTGAGGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476357.1
CDS CAA 90 bp CCCACCACTGACCTCCCACCTCTGAAGAAGGCCTTGTCTCGGGCTTaGGACGGTGACAGTGGTGGCATTCATGTCCACATACAGTCCCAT +
Preference number: 6 (lower is better)
Translates to: PTTDLPPLKKALSRA*DGDSGGIHVHIQSH
Trigger: ATGGGACTGTATGTGGACATGAATGCCACCACTGTCACCGTCCAAAGCCCGAGACAAGGCCTTCTTCAGAGGTGGGAGGTCAGTGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418570.6
CDS CAA 90 bp GTGAAAGAGAAGGGCCTCAGGCCCAGCTGGGTCTACCGATACTTCTaGGGGACCAGACTCTTTGGAGGAAACCATGGGCAGAGGATGCAG +
Preference number: 6 (lower is better)
Translates to: VKEKGLRPSWVYRYF*GTRLFGGNHGQRMQ
Trigger: CTGCATCCTCTGCCCATGGTTTCCTCCAAAGAGTCTGGTCCCCAAGAAGTATCGGTAGACCCAGCTGGGCCTGAGGCCCTTCTCTTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476357.1
CDS GCA 72 bp GGACCAGACTCTTTGGAGGAAACCATGGGCAGAGGATaGAGCCATAGACGTGCTTTGGCCAGTGCGTCGGAA +
Preference number: 6 (lower is better)
Translates to: GPDSLEETMGRG*SHRRALASASE
Trigger: TTCCGACGCACTGGCCAAAGCACGTCTATGGCTGCATCCTCTGCCCATGGTTTCCTCCAAAGAGTCTGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476357.1
CDS CCA 72 bp GCTTGCACCACTCTGGGGAGAATGGAGGCAGATGTCTaGCCTCTTCTCGCCGGTTTGGCTGTTTGCAGGAAT +
Preference number: 6 (lower is better)
Translates to: ACTTLGRMEADV*PLLAGLAVCRN
Trigger: ATTCCTGCAAACAGCCAAACCGGCGAGAAGAGGCCAGACATCTGCCTCCATTCTCCCCAGAGTGGTGCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000476357.1
ENST00000520253.1
CDS CAA 72 bp GGCAGATGTCTGGCCTCTTCTCGCCGGTTTGGCTGTTaGCAGGAATGGTCCAAGCCCCTTCTTCACCAAGAG +
Preference number: 6 (lower is better)
Translates to: GRCLASSRRFGC*QEWSKPLLHQE
Trigger: CTCTTGGTGAAGAAGGGGCTTGGACCATTCCTGCAAACAGCCAAACCGGCGAGAAGAGGCCAGACATCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476357.1
CDS CAA 72 bp AGAATGGAGGCAGATGTCTGGCCTCTTCTCGCCGGTTaGGCTGTTTGCAGGAATGGTCCAAGCCCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: RMEADVWPLLAG*AVCRNGPSPFW
Trigger: CCAGAAGGGGCTTGGACCATTCCTGCAAACAGCCAAACCGGCGAGAAGAGGCCAGACATCTGCCTCCATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520253.1
CDS CAA 90 bp AGCCATCTCGGCAAATTCCAGGCTCAGGTCTACCCTATAGAAAGCTaGTGTTCCCGGGGTTCCTCCGACTTCTTGGCATCGCTGGACCTG +
Preference number: 6 (lower is better)
Translates to: SHLGKFQAQVYPIES*CSRGSSDFLASLDL
Trigger: CAGGTCCAGCGATGCCAAGAAGTCGGAGGAACCCCGGGAACACAAGCTTTCTATAGGGTAGACCTGAGCCTGGAATTTGCCGAGATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000520253.1
CDS CAA 90 bp ACTCTGGGGAGAATGGAGGCAGATGTCTGGCCTCTTCTCGCCGGTTaGGCTGTTTGCAGGAATGGTCCAAGCCCCTTCTTCACCAAGAGA +
Preference number: 6 (lower is better)
Translates to: TLGRMEADVWPLLAG*AVCRNGPSPFFTKR
Trigger: TCTCTTGGTGAAGAAGGGGCTTGGACCATTCCTGCAAACAGCCAAACCGGCGAGAAGAGGCCAGACATCTGCCTCCATTCTCCCCAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476357.1
CDS GCA 72 bp GCAGATGTCTGGCCTCTTCTCGCCGGTTTGGCTGTTTaGAGGAATGGTCCAAGCCCCTTCTTCACCAAGAGA +
Preference number: 6 (lower is better)
Translates to: ADVWPLLAGLAV*RNGPSPFFTKR
Trigger: TCTCTTGGTGAAGAAGGGGCTTGGACCATTCCTGCAAACAGCCAAACCGGCGAGAAGAGGCCAGACATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476357.1
CDS CCA 72 bp TGGTGGCATTCATGTCCACATACAGTCCCATCAGGCTaGCGTCTTCAAGAGAAGCCACCAGCTCCCCTCGAA +
Preference number: 6 (lower is better)
Translates to: WWHSCPHTVPSG*RLQEKPPAPLE
Trigger: TTCGAGGGGAGCTGGTGGCTTCTCTTGAAGACGCCAGCCTGATGGGACTGTATGTGGACATGAATGCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000520253.1
CDS CCA 72 bp GAATGGAGGCAGATGTCTGGCCTCTTCTCGCCGGTTTaGCTGTTTGCAGGAATGGTCCAAGCCCCTTTTTGG +
Preference number: 6 (lower is better)
Translates to: EWRQMSGLFSPV*LFAGMVQAPFW
Trigger: CCAAAAAGGGGCTTGGACCATTCCTGCAAACAGCCAAACCGGCGAGAAGAGGCCAGACATCTGCCTCCATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS CCA 72 bp GAATGGAGGCAGATGTCTGGCCTCTTCTCGCCGGTTTaGCTGTTTGCAGGAATGGTCCAAGCCCCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: EWRQMSGLFSPV*LFAGMVQAPSS
Trigger: TGAAGAAGGGGCTTGGACCATTCCTGCAAACAGCCAAACCGGCGAGAAGAGGCCAGACATCTGCCTCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476357.1
CDS CAA 72 bp AGAATGGAGGCAGATGTCTGGCCTCTTCTCGCCGGTTaGGCTGTTTGCAGGAATGGTCCAAGCCCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: RMEADVWPLLAG*AVCRNGPSPFF
Trigger: GAAGAAGGGGCTTGGACCATTCCTGCAAACAGCCAAACCGGCGAGAAGAGGCCAGACATCTGCCTCCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476357.1
CDS CAA 90 bp GAGAATGGAGGCAGATGTCTGGCCTCTTCTCGCCGGTTTGGCTGTTaGCAGGAATGGTCCAAGCCCCTTCTTCACCAAGAGAGAAGTGGA +
Preference number: 6 (lower is better)
Translates to: ENGGRCLASSRRFGC*QEWSKPLLHQERSG
Trigger: TCCACTTCTCTCTTGGTGAAGAAGGGGCTTGGACCATTCCTGCAAACAGCCAAACCGGCGAGAAGAGGCCAGACATCTGCCTCCATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476357.1
CDS TCA 72 bp GCATTAGAAACAAGAACACATGGGCTCCGGCTGCCCTaGGAATCTCAACCCAAAGATGGGTTCGAGGGACCG +
Preference number: 6 (lower is better)
Translates to: ALETRTHGLRLP*ESQPKDGFEGP
Trigger: CGGTCCCTCGAACCCATCTTTGGGTTGAGATTCTCAGGGCAGCCGGAGCCCATGTGTTCTTGTTTCTAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476357.1
CDS CAA 72 bp ACATGGGCCCACAGTGGACGCTTTCCTGGCCCAGCCTaGACCTTAGCATCGGACACTTCATTATGTAGCGAT +
Preference number: 6 (lower is better)
Translates to: TWAHSGRFPGPA*TLASDTSLCSD
Trigger: ATCGCTACATAATGAAGTGTCCGATGCTAAGGTCAAGGCTGGGCCAGGAAAGCGTCCACTGTGGGCCCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000520253.1
CDS CAA 72 bp GGCAAATTCCAGGCTCAGGTCTACCCTATAGAAAGCTaGTGTTCCCGGGGTTCCTCCGACTTCTTGGCATCG +
Preference number: 6 (lower is better)
Translates to: GKFQAQVYPIES*CSRGSSDFLAS
Trigger: CGATGCCAAGAAGTCGGAGGAACCCCGGGAACACAAGCTTTCTATAGGGTAGACCTGAGCCTGGAATTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000520253.1
CDS CAA 72 bp AGAATGGAGGCAGATGTCTGGCCTCTTCTCGCCGGTTaGGCTGTTTGCAGGAATGGTCCAAGCCCCTTTTTG +
Preference number: 6 (lower is better)
Translates to: RMEADVWPLLAG*AVCRNGPSPFL
Trigger: CAAAAAGGGGCTTGGACCATTCCTGCAAACAGCCAAACCGGCGAGAAGAGGCCAGACATCTGCCTCCATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000418570.6
CDS TCA 72 bp CCTCTTTTGACTAGACCCAGTCTCTGCTTGGGGATGTaGACTAAGACCTCCGACTCTGGCTGGAATGACACC +
Preference number: 6 (lower is better)
Translates to: PLLTRPSLCLGM*TKTSDSGWNDT
Trigger: GGTGTCATTCCAGCCAGAGTCGGAGGTCTTAGTTCACATCCCCAAGCAGAGACTGGGTCTAGTCAAAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000520253.1
CDS CAA 72 bp GATGCTTCTGTTAAAACTTCTGCTGCAGAGCTTGGCTaGTCCGTGTCTGACCTGAAGGAGAGGCTCCATGGG +
Preference number: 6 (lower is better)
Translates to: DASVKTSAAELG*SVSDLKERLHG
Trigger: CCCATGGAGCCTCTCCTTCAGGTCAGACACGGACAAGCCAAGCTCTGCAGCAGAAGTTTTAACAGAAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377004.8
CDS TCA 72 bp CACGTGGCTCCTTGGGATCCACAGGGTCATGTAGTCTaGGAAGCACTCAACTGTGTCTGTCCAACAAGAAGA +
Preference number: 6 (lower is better)
Translates to: HVAPWDPQGHVV*EALNCVCPTRR
Trigger: TCTTCTTGTTGGACAGACACAGTTGAGTGCTTCTCAGACTACATGACCCTGTGGATCCCAAGGAGCCACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000520253.1
CDS TCA 72 bp CCTCTTTTGACTAGACCCAGTCTCTGCTTGGGGATGTaGACTAAGACCTCCGACTCTGGCTGGAATGACACT +
Preference number: 6 (lower is better)
Translates to: PLLTRPSLCLGM*TKTSDSGWNDT
Trigger: AGTGTCATTCCAGCCAGAGTCGGAGGTCTTAGTTCACATCCCCAAGCAGAGACTGGGTCTAGTCAAAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418570.6
CDS CCA 72 bp TCCTTGTTCTCAGTCACCATAAAGATGTTGGACTGGTaGACTCGGAGGAATCTGAGGCTCAGGGTTTCCTCA +
Preference number: 6 (lower is better)
Translates to: SLFSVTIKMLDW*TRRNLRLRVSS
Trigger: TGAGGAAACCCTGAGCCTCAGATTCCTCCGAGTCCACCAGTCCAACATCTTTATGGTGACTGAGAACAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000520253.1
CDS CCA 72 bp AAGTCCTTGTTCTCAGTCACCATAAAGATGTTGGACTaGTGGACTCGGAGGAATCTGAGGCTCAGGGTTTCC +
Preference number: 6 (lower is better)
Translates to: KSLFSVTIKMLD*WTRRNLRLRVS
Trigger: GGAAACCCTGAGCCTCAGATTCCTCCGAGTCCACCAGTCCAACATCTTTATGGTGACTGAGAACAAGGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377004.8
ENST00000418570.6
ENST00000520253.1
CDS TCA 72 bp TTTGCTTTCTCTTTCTGCACAAAGCAGGCCGAGTATTaGACTCGAAAAAGGAAGTCACCGTCTGAAGCCAGA +
Preference number: 6 (lower is better)
Translates to: FAFSFCTKQAEY*TRKRKSPSEAR
Trigger: TCTGGCTTCAGACGGTGACTTCCTTTTTCGAGTTCAATACTCGGCCTGCTTTGTGCAGAAAGAGAAAGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377004.8
ENST00000520253.1